CsGy4G013490 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G013490
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Chaperonin-like RbcX
Location	Chr4 : 18554028 .. 18559492 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTAAGAATATTTAATTTAAATATGGAAAAAACAACCACAATTGGTTTTGAGAGTTGGGGAATGTTGCATGGATGATTTAAGACCTCAGAAAAATGTTTGGTTTACGTTGGCAGTTGACATGCATTTTCTTTTTGTACCAAAGAAAAAAGGAAATTAACGACAAACTTCCAACAATATGAAACCTTTCTTTCATCCTCTTTCTTGTACAATTCTAAATTGAATTCTCAAAGTTTGATCAGTTTCTTACGATAGCTGAATCTTTGACCCAATCTCCTATTCTCTCCCACTTTTCCTTTATATTCACTTCTTTCTCTTTCAATTCCTTTATTCCCACTTCATATATCCTCCTTCTCTCAACGGTTGGCTTGTGATCTTGGAATCTTTTTTTCCAAAATGGTGGGAGCTTTGTTTGTTGTTGGTGCACCTGTGGTCGACTCCCTGCCGCCGTGTTTGTCTTTCGACTCGTCGCCGGTTACCAATATGAGTCTTAGAAGTGGTGGGGATTTGGTTTTGCAAAGGAAATCCAAGGCTAAGAGTTATTTGACCGTGTCTAAATCGGTGGACTTGAGAAGTTCGTTTGTCAATCTTGGTGACGAGTGGCAGCTCTCGGCCGGTGGTGGCCGTCAGAGTAAGAGGAACCAACGAAGGAATCGGAGGCTTGTTGTTGTCAATGAATTTGCAGGGCAGTATGAGGATAGTTTTGATGATGTGAAAATGGTAGGGATATTATATCACTCTCTTCTTCAATGCAAAATGCTTTGATCTGTCTTCTAATTTTTGGTTTAATTTTAAAAAAAAATAAACGAAATGGTTACCAAACGGCATGAATTGTTATCAACTACTTGTCTCTTCTCCTGCTTCCTGAATGATCAATGTTCTTGGCACTTGGATTCTGCATTTAAAAAGGGAAGAAAAAACTGTTTTAAGCTTACCAGAGGCTTTCTATTTGCAGCAAATACAGAATTATTTCACATACAAAGCTGTGAAGACAGTTTTGAATCAGCTTTATGAGATGAACCCAACACAGTACAGATGGTTTTATAAGTAAGTGAAGCCTTTTGCTTTAGTTTTTAAGAACTCATTATGACTGCCAATGTAAATGCTTATTCTGTGGAAATCAAAATAGTGTTTTTAGAACATTATTTCATTTCCCCATCTAATCTTGCATTTCACCTTTTTCTACATCAACAGCTTTGTTGTAAATCACAAGCCTGGGGAAGGGAAGCGTTTCATTCGAACTCTTGTAAAGGTAATATACCAATCTCTAAAAGATTGTAAACCTAAACCTCAACCTAAACATAACTCACTTGATTAAGACACAGTATCATCAACCAGCACATTAGGGGTTCAAATCCCTATGCATTCACGTGTTGAACTCAAAAGGGAAGGAAAAAGAAGTCTAAAGAGTCTATTTGAATTGCATGAACGATATGTAAATGATTGAGTACTGAAACAAATTGGATGATTACCAGGAGAAGCAAGATTTGGCTGAGAGGGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGGTAAGAACAAACTTGATATTTTGAGGGGTTTTTATTATTATTATTATTATATTGAATTGTGATTTGGTGTTGGATAGAAATGTGATCATGCTGAAATATACAAAGGGATATCTGATGAGAACTTGGAGTTGATGCGAGAGAGGCTAATGGAGACTGTGATATGGCCTTCCGACGACTAGAGCTTTTAGGAGATTGGCAGACTAGGAGTTAGAAGATTTTTTTATCTTATTTATTTTCCTTTAGTGTCGACCAATCTGGTCCTGTTCCTAATTAGTTGTCATTCACATTCATATTATTTTCCCCCAACTAATAACAATTCTTACATCCACTACTACAAAAAAAATCAATGTAAATACTTTCAACATCTTATACCATGTTAAAAGTATCAATGTCATTGAATATGTTTCTATAAACAAAAGGCATTTTCGAGATTAGTCCAACCGTTTCATATCTGTTGTAATTGCAGTAATCAAACCTCACAGGATATCTCATTTTGTGCTAATCTAGGTACGATTCTATTGGTTTAGGCCTAAACCTTTGACTAAAAGGTCATAGGTTCGAAAATCACGAATCCCATATGTTGTTGAACTCAAAAACATATAATAATGTTTCACTTTCTGTGTCAACACCTTTCCAGTTGAAAGAGTAATAATTTCTCAATTTCTAAAGCAAAATCACGAAGGTGACATTTACTATCTTCAAGAGAAATTTATGCAGATCCACATCCACCACCATCATGAAGATGATAAAGGCGGTAATCTTTAGTAAAAGGTGTTGGTTCATGGTTGTGATTTACAGCTCTTTCAATAAAATAACATGAGAAATACATATTTGAAATGCACGTCATATATCTAATCATAATTTGTACCAGCAAGTAGAATGGTTTGTTTATGCATGATAAACCAACGCACTCATACATTAGAAAGGATAATGAGAAAATCAGTACAAAGTATACGTACTGATTCGGTTCTCGGAGGAATCTAGATCAAGTTGGGGGAACCAGGCAATTGACCAAAAGACCGCTGCAGATCACAAAGAAGAATGCTGCAAGAAGTGGATCTCTTGTAAGATATATCGGACAAGAACAGAGAATATCGATCTGGGCTTCATCCCTTTCATTTTACAATTCTCTCACAAAGCACATCTCAATTCAGTTTTGAATAGCAGGAGTGAATCATGAGCATAATGCAAGGAGTGAACAATGACTTAATTTTTTTCAAGAAAAGCTCTTTTCATAACACGCACAAAATCACGTCTGGCTGGATGACAGAAAAATCCTTAATGTCAGCCCAAATCTCGGATCAACGATGTCAAAGAATTCAAATTTTCGTAAATTCTTTCTGATTGAGGGTGTAATACATCAGTAGCAGTGAAATGGTGAACCTGATTGCCAATTACAATCCAGCTAGTTCCTGGAGGCTTTCCTAGACCTCTTTCTCGAAGCCACTTTCTTATCTGTACAACTTCTGACCAAAGGCCTGCTGCTGCATAAATATTGGAAAGCAAAATAAAATTGCCTGGATTGCTTGGTTCTAATTCAACAAGCTTTCCAAAGATGGTCTCCAATAGCTTGTTATTGCTTTTAATCTGACATGAACTGAGCAAAGCTCTCCAAATTGATGCATCAGGTTCAATGGGCATTGAGTTGATGAAAGCTATAGCTTCAGAAAAATGGCCCCCACGACCAAGCAGATCAACCATACAACCATAGTGAGTAAGTTGAGGAGCAATACCAAAATCCCGCACCATGGAATGGAAAAGTTGCAAACCTGTCACGGTCAAACCAGAATGGCTGCAGGCAGATAAAACAGATGCAAAAGATACATTGTTAGGCTTGAAACCATCATCCAACATCTGTGCAAATGCTAGAGTGGCATCGCGTCCACGACCGTGCATGCCATATCCTGTTATCATGGCATTCCATGAGACAATACTTCTTGTCTGCAGGGTGCAAAAAATCTTTTCTGCATATTGCAATTTACCGCATCGTGCATACATAGTTATAAAAGCATTTGCCAGAGAAGCATCCATTTCAAGAGATACTTCCCTTCTGGTTGTGTAAGCATGCAAGCACTGTCCTAGTGGTAGATGAGCAAGCTGCGTACAAGATGTGAGGATATTTACGATTGTCACAGAGTTCGGCTCCAGCTCAGAAATCATATGGTTAAAAAGTAATAGAGCTTTTCCTGCATTGTCATTCTTTATATAACTTGAAATTAGGGAATTCCATGAGACTAAATCTCTTTGAGGACATCTAGTAAACATATTTGTAGCTGCTCTTTCATCACCACAATTGATGTACATTTCAGTAAGTGAAGTGTTCAAAGAAGTATTTATTTCGAGACCATTTTTTATTGCAAAACCATGGATCGATCTCCCAAACACTAAATCACTTCCATCTTTACAGAATGCGAGGAGAGATACTATCGTGTAAGAATTAAACTTGATTTCTGATTCACACATCATCAAAAAGAGTTCAAATGCTTTGGCTCGAAACATACTCTGAGCAAATGCTGATATCATTGTGTTCCAGGAGATGACATCCAAACCTCTCATCTTCTCAAAAACATACTGTGCAGCAGTTATTTGATTGTGCTTGACATACATGCTTAATAACGCATTGCCCAGATATGCATCTAGTTCTATTCCACTTTTCATGGCATGAGCATGTAAGCCTCTGCCCCATATTGAACCATCATTTAGATCATTGCATAAAGATAACATAATCGCAATGGTTCTAACATCTTCTTTTATGCGTTCTAAACGCATTTTAATAAACAAAGCTATAGCTTCTGCATGAAATCCAAAACCAATGTAAGAAGATATCATGGAATTCCATAAAGCAGCATCAGAGGTGGGAACAGCATTAAACAACGCCCATGATGATTCCAAACTTCCATTATCACTATACATATTCAATAGTGCATTTAATATAAACAAGTCATTAATCAAATTGAACTTGATAGCCAACTGGTGCAGTTGCATGCCTAATCGAAGACATCCATATTCTGCGCATGCTTGAATTACCACCAACATGGTAACAGCATCAAACTTTATACCTTCTATCAGCATACTACTATAAAGCTTCAAAGCTTTTGCGCAATCTCCAACATTAAGAAATCCGGTTATTATTGCATTCCAACTCACTATATTTCTCACCAACATCAAGCTAAAAACACGGTGTGAAAGTACTGCATCAAATCTCATATAAAATCCTACCAAAGCAGTACCAACATAAGCATCCATATCAAACAACCCATTTCTCAAACAATAACCATGAATCTCTTGTCCTAATCTCAACTCCAACATCTCACCACATGCCAAAAGTAGAGCCACAACAGTACGAGAATTGGGTGTGAGACCCGCCTTTTTCATCTCCACAAACAATAACACTGCTTCTTTATAGCACAAACACCCCACATATCCGGAAATCAAAGCATTCCACGACACCAAATCTCTTTCAGGCATTTCAACGAACACTTTGCTAGCCTCTGCAACAAGCCCACATTTACAATAGAAATCGACCAAAGCAGTCCCAACCCGAACATCATTGATCAAATCCAAACCCCTAATACAAGAATGAATCCTTACCCCATTACCAATGGCGTTGAGCCTCCCACAAGCCTTTAGAACAAGAGGCATTGTAGCAGAATCGGGTGTAATGCCAAGAGATTCCATCTGGGTATATGTAGACAGAATGGCATGGTCATTCTTAAGCTTGGTATGATGCTTTATGATTGAGTTCCAATCCTTTGAGACATTGACCAAATGGGTTTGTTCAGGAGTTGAAGAGAGTCCGTGAAAGCTTAGATTGACTGCAATTTCCATTGACAAAGACCCAACATCATTTGGCGGGTGAAGGAGAAAGGAAGTTAAGGGATAGAGTAATGGATTAACCGATCGCAGCTTTTGAATTGAAGTTGAC

mRNA sequence

CAGTAAGAATATTTAATTTAAATATGGAAAAAACAACCACAATTGGTTTTGAGAGTTGGGGAATGTTGCATGGATGATTTAAGACCTCAGAAAAATGTTTGGTTTACGTTGGCAGTTGACATGCATTTTCTTTTTGTACCAAAGAAAAAAGGAAATTAACGACAAACTTCCAACAATATGAAACCTTTCTTTCATCCTCTTTCTTGTACAATTCTAAATTGAATTCTCAAAGTTTGATCAGTTTCTTACGATAGCTGAATCTTTGACCCAATCTCCTATTCTCTCCCACTTTTCCTTTATATTCACTTCTTTCTCTTTCAATTCCTTTATTCCCACTTCATATATCCTCCTTCTCTCAACGGTTGGCTTGTGATCTTGGAATCTTTTTTTCCAAAATGGTGGGAGCTTTGTTTGTTGTTGGTGCACCTGTGGTCGACTCCCTGCCGCCGTGTTTGTCTTTCGACTCGTCGCCGGTTACCAATATGAGTCTTAGAAGTGGTGGGGATTTGGTTTTGCAAAGGAAATCCAAGGCTAAGAGTTATTTGACCGTGTCTAAATCGGTGGACTTGAGAAGTTCGTTTGTCAATCTTGGTGACGAGTGGCAGCTCTCGGCCGGTGGTGGCCGTCAGAGTAAGAGGAACCAACGAAGGAATCGGAGGCTTGTTGTTGTCAATGAATTTGCAGGGCAGTATGAGGATAGTTTTGATGATGTGAAAATGCAAATACAGAATTATTTCACATACAAAGCTGTGAAGACAGTTTTGAATCAGCTTTATGAGATGAACCCAACACAGTACAGATGGTTTTATAACTTTGTTGTAAATCACAAGCCTGGGGAAGGGAAGCGTTTCATTCGAACTCTTGTAAAGGAGAAGCAAGATTTGGCTGAGAGGGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGAAATGTGATCATGCTGAAATATACAAAGGGATATCTGATGAGAACTTGGAGTTGATGCGAGAGAGGCTAATGGAGACTGTGATATGGCCTTCCGACGACTAGAGCTTTTAGGAGATTGGCAGACTAGGAGTTAGAAGATTTTTTTATCTTATTTATTTTCCTTTAGTGTCGACCAATCTGGTCCTGTTCCTAATTAGTTGTCATTCACATTCATATTATTTTCCCCCAACTAATAACAATTCTTACATCCACTACTACAAAAAAAATCAATGTAAATACTTTCAACATCTTATACCATGTTAAAAGTATCAATGTCATTGAATATGTTTCTATAAACAAAAGGCATTTTCGAGATTAGTCCAACCGTTTCATATCTGTTGTAATTGCAGTAATCAAACCTCACAGGATATCTCATTTTGTGCTAATCTAGGTACGATTCTATTGGTTTAGGCCTAAACCTTTGACTAAAAGGTCATAGGTTCGAAAATCACGAATCCCATATGTTGTTGAACTCAAAAACATATAATAATGTTTCACTTTCTGTGTCAACACCTTTCCAGTTGAAAGAGTAATAATTTCTCAATTTCTAAAGCAAAATCACGAAGGTGACATTTACTATCTTCAAGAGAAATTTATGCAGATCCACATCCACCACCATCATGAAGATGATAAAGGCGGTAATCTTTAGTAAAAGGTGTTGGTTCATGGTTGTGATTTACAGCTCTTTCAATAAAATAACATGAGAAATACATATTTGAAATGCACGTCATATATCTAATCATAATTTGTACCAGCAAGTAGAATGGTTTGTTTATGCATGATAAACCAACGCACTCATACATTAGAAAGGATAATGAGAAAATCAGTACAAAGTATACGTACTGATTCGGTTCTCGGAGGAATCTAGATCAAGTTGGGGGAACCAGGCAATTGACCAAAAGACCGCTGCAGATCACAAAGAAGAATGCTGCAAGAAGTGGATCTCTTGTAAGATATATCGGACAAGAACAGAGAATATCGATCTGGGCTTCATCCCTTTCATTTTACAATTCTCTCACAAAGCACATCTCAATTCAGTTTTGAATAGCAGGAGTGAATCATGAGCATAATGCAAGGAGTGAACAATGACTTAATTTTTTTCAAGAAAAGCTCTTTTCATAACACGCACAAAATCACGTCTGGCTGGATGACAGAAAAATCCTTAATGTCAGCCCAAATCTCGGATCAACGATGTCAAAGAATTCAAATTTTCGTAAATTCTTTCTGATTGAGGGTGTAATACATCAGTAGCAGTGAAATGGTGAACCTGATTGCCAATTACAATCCAGCTAGTTCCTGGAGGCTTTCCTAGACCTCTTTCTCGAAGCCACTTTCTTATCTGTACAACTTCTGACCAAAGGCCTGCTGCTGCATAAATATTGGAAAGCAAAATAAAATTGCCTGGATTGCTTGGTTCTAATTCAACAAGCTTTCCAAAGATGGTCTCCAATAGCTTGTTATTGCTTTTAATCTGACATGAACTGAGCAAAGCTCTCCAAATTGATGCATCAGGTTCAATGGGCATTGAGTTGATGAAAGCTATAGCTTCAGAAAAATGGCCCCCACGACCAAGCAGATCAACCATACAACCATAGTGAGTAAGTTGAGGAGCAATACCAAAATCCCGCACCATGGAATGGAAAAGTTGCAAACCTGTCACGGTCAAACCAGAATGGCTGCAGGCAGATAAAACAGATGCAAAAGATACATTGTTAGGCTTGAAACCATCATCCAACATCTGTGCAAATGCTAGAGTGGCATCGCGTCCACGACCGTGCATGCCATATCCTGTTATCATGGCATTCCATGAGACAATACTTCTTGTCTGCAGGGTGCAAAAAATCTTTTCTGCATATTGCAATTTACCGCATCGTGCATACATAGTTATAAAAGCATTTGCCAGAGAAGCATCCATTTCAAGAGATACTTCCCTTCTGGTTGTGTAAGCATGCAAGCACTGTCCTAGTGGTAGATGAGCAAGCTGCGTACAAGATGTGAGGATATTTACGATTGTCACAGAGTTCGGCTCCAGCTCAGAAATCATATGGTTAAAAAGTAATAGAGCTTTTCCTGCATTGTCATTCTTTATATAACTTGAAATTAGGGAATTCCATGAGACTAAATCTCTTTGAGGACATCTAGTAAACATATTTGTAGCTGCTCTTTCATCACCACAATTGATGTACATTTCAGTAAGTGAAGTGTTCAAAGAAGTATTTATTTCGAGACCATTTTTTATTGCAAAACCATGGATCGATCTCCCAAACACTAAATCACTTCCATCTTTACAGAATGCGAGGAGAGATACTATCGTGTAAGAATTAAACTTGATTTCTGATTCACACATCATCAAAAAGAGTTCAAATGCTTTGGCTCGAAACATACTCTGAGCAAATGCTGATATCATTGTGTTCCAGGAGATGACATCCAAACCTCTCATCTTCTCAAAAACATACTGTGCAGCAGTTATTTGATTGTGCTTGACATACATGCTTAATAACGCATTGCCCAGATATGCATCTAGTTCTATTCCACTTTTCATGGCATGAGCATGTAAGCCTCTGCCCCATATTGAACCATCATTTAGATCATTGCATAAAGATAACATAATCGCAATGGTTCTAACATCTTCTTTTATGCGTTCTAAACGCATTTTAATAAACAAAGCTATAGCTTCTGCATGAAATCCAAAACCAATGTAAGAAGATATCATGGAATTCCATAAAGCAGCATCAGAGGTGGGAACAGCATTAAACAACGCCCATGATGATTCCAAACTTCCATTATCACTATACATATTCAATAGTGCATTTAATATAAACAAGTCATTAATCAAATTGAACTTGATAGCCAACTGGTGCAGTTGCATGCCTAATCGAAGACATCCATATTCTGCGCATGCTTGAATTACCACCAACATGGTAACAGCATCAAACTTTATACCTTCTATCAGCATACTACTATAAAGCTTCAAAGCTTTTGCGCAATCTCCAACATTAAGAAATCCGGTTATTATTGCATTCCAACTCACTATATTTCTCACCAACATCAAGCTAAAAACACGGTGTGAAAGTACTGCATCAAATCTCATATAAAATCCTACCAAAGCAGTACCAACATAAGCATCCATATCAAACAACCCATTTCTCAAACAATAACCATGAATCTCTTGTCCTAATCTCAACTCCAACATCTCACCACATGCCAAAAGTAGAGCCACAACAGTACGAGAATTGGGTGTGAGACCCGCCTTTTTCATCTCCACAAACAATAACACTGCTTCTTTATAGCACAAACACCCCACATATCCGGAAATCAAAGCATTCCACGACACCAAATCTCTTTCAGGCATTTCAACGAACACTTTGCTAGCCTCTGCAACAAGCCCACATTTACAATAGAAATCGACCAAAGCAGTCCCAACCCGAACATCATTGATCAAATCCAAACCCCTAATACAAGAATGAATCCTTACCCCATTACCAATGGCGTTGAGCCTCCCACAAGCCTTTAGAACAAGAGGCATTGTAGCAGAATCGGGTGTAATGCCAAGAGATTCCATCTGGGTATATGTAGACAGAATGGCATGGTCATTCTTAAGCTTGGTATGATGCTTTATGATTGAGTTCCAATCCTTTGAGACATTGACCAAATGGGTTTGTTCAGGAGTTGAAGAGAGTCCGTGAAAGCTTAGATTGACTGCAATTTCCATTGACAAAGACCCAACATCATTTGGCGGGTGAAGGAGAAAGGAAGTTAAGGGATAGAGTAATGGATTAACCGATCGCAGCTTTTGAATTGAAGTTGAC

Coding sequence (CDS)

ATGGTGGGAGCTTTGTTTGTTGTTGGTGCACCTGTGGTCGACTCCCTGCCGCCGTGTTTGTCTTTCGACTCGTCGCCGGTTACCAATATGAGTCTTAGAAGTGGTGGGGATTTGGTTTTGCAAAGGAAATCCAAGGCTAAGAGTTATTTGACCGTGTCTAAATCGGTGGACTTGAGAAGTTCGTTTGTCAATCTTGGTGACGAGTGGCAGCTCTCGGCCGGTGGTGGCCGTCAGAGTAAGAGGAACCAACGAAGGAATCGGAGGCTTGTTGTTGTCAATGAATTTGCAGGGCAGTATGAGGATAGTTTTGATGATGTGAAAATGCAAATACAGAATTATTTCACATACAAAGCTGTGAAGACAGTTTTGAATCAGCTTTATGAGATGAACCCAACACAGTACAGATGGTTTTATAACTTTGTTGTAAATCACAAGCCTGGGGAAGGGAAGCGTTTCATTCGAACTCTTGTAAAGGAGAAGCAAGATTTGGCTGAGAGGGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGAAATGTGATCATGCTGAAATATACAAAGGGATATCTGATGAGAACTTGGAGTTGATGCGAGAGAGGCTAATGGAGACTGTGATATGGCCTTCCGACGACTAG

Protein sequence

MVGALFVVGAPVVDSLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLRSSFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVKTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVKKCDHAEIYKGISDENLELMRERLMETVIWPSDD

Homology

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BLAST of CsGy4G013490 vs. NCBI nr
Match: XP_004142113.1 (PREDICTED: uncharacterized protein LOC101203881 [Cucumis sativus] >KGN54180.1 hypothetical protein Csa_4G291920 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 1.1e-116
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLRS 60
           MVGALFVVGAPVVDSLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLRS
Sbjct: 1   MVGALFVVGAPVVDSLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLRS 60

Query: 61  SFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVK 120
           SFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVK
Sbjct: 61  SFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVK 120

Query: 121 TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK 180
           TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK
Sbjct: 121 TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK 180

Query: 181 KCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
           KCDHAEIYKGISDENLELMRERLMETVIWPSDD
Sbjct: 181 KCDHAEIYKGISDENLELMRERLMETVIWPSDD 213

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BLAST of CsGy4G013490 vs. NCBI nr
Match: XP_008449714.1 (PREDICTED: uncharacterized protein LOC103491510 [Cucumis melo])

HSP 1 Score: 410.6 bits (1054), Expect = 3.2e-111
Identity = 203/213 (95.31%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLRS 60
           MVGALFVVGAPV+DS PPC SFDSSPVTNMSLRSGGDLVLQRKSK KSY TVSKSVDLRS
Sbjct: 1   MVGALFVVGAPVIDSPPPCFSFDSSPVTNMSLRSGGDLVLQRKSKTKSYSTVSKSVDLRS 60

Query: 61  SFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVK 120
           SFVN GDEWQLSAGG RQS+RNQRRNRRLV+VNEFAGQYEDSFDDVKMQIQNYFTYKAVK
Sbjct: 61  SFVNFGDEWQLSAGGCRQSRRNQRRNRRLVIVNEFAGQYEDSFDDVKMQIQNYFTYKAVK 120

Query: 121 TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK 180
           TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK
Sbjct: 121 TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK 180

Query: 181 KCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
           KCDHAEIYK ISDENLELMRERLMETVIWPSDD
Sbjct: 181 KCDHAEIYKEISDENLELMRERLMETVIWPSDD 213

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BLAST of CsGy4G013490 vs. NCBI nr
Match: XP_022986709.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 359.8 bits (922), Expect = 6.5e-96
Identity = 185/214 (86.45%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSLP-PCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLR 60
           MVGALF VGAPV+DS P PCL  DSSPVTN SLRS GDLVL R+SKAKS+L VS+ VDLR
Sbjct: 1   MVGALFAVGAPVIDSRPCPCLCLDSSPVTNTSLRSRGDLVLPRRSKAKSHLAVSRLVDLR 60

Query: 61  SSFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120
           SSFVN   EWQLSA G R+  RNQRRNRRLVVVNEFAGQYE+SFDDVKMQI NYFTYKAV
Sbjct: 61  SSFVNSDSEWQLSATGHRR-WRNQRRNRRLVVVNEFAGQYEESFDDVKMQILNYFTYKAV 120

Query: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180
           KTVLNQLYEMNPTQYRWFYNFVVNHKP +GKRFIRTLVKEKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPRDGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

Query: 181 KKCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
           K+CDHAEIYK IS ENLELMRERLMETVIWPSDD
Sbjct: 181 KRCDHAEIYKEISGENLELMRERLMETVIWPSDD 213

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BLAST of CsGy4G013490 vs. NCBI nr
Match: XP_022148835.1 (chaperonin-like RbcX protein 2, chloroplastic [Momordica charantia])

HSP 1 Score: 349.0 bits (894), Expect = 1.2e-92
Identity = 176/214 (82.24%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 2   VGALFVVGAPVVDSLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTV-SKSVDLRS 61
           VGA FVVGAPV+DS  P L  DS P+T+MSLRSGGDLVL+RKSKAK+ L +   ++DLRS
Sbjct: 4   VGASFVVGAPVLDS--PALCLDSPPITSMSLRSGGDLVLRRKSKAKNRLAMPGSTLDLRS 63

Query: 62  SFVNLGDEWQLSAGG-GRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 121
           SFVN G EW+LSAG  G +S+RNQRRNRRLV+ NEFAGQYEDSFDDVKMQIQNYFTYKAV
Sbjct: 64  SFVNSGGEWRLSAGAVGHRSRRNQRRNRRLVIANEFAGQYEDSFDDVKMQIQNYFTYKAV 123

Query: 122 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 181
           +TVLNQLYEMNPTQYRWFY+FV NHKPG+GKRFIRTLVKEKQDLAERVMITRLHLY KWV
Sbjct: 124 RTVLNQLYEMNPTQYRWFYDFVTNHKPGDGKRFIRTLVKEKQDLAERVMITRLHLYGKWV 183

Query: 182 KKCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
           KKCDHAEIYK ISDENL+LMRERLMETVIWPS+D
Sbjct: 184 KKCDHAEIYKEISDENLDLMRERLMETVIWPSED 215

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BLAST of CsGy4G013490 vs. NCBI nr
Match: XP_023512052.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.3 bits (869), Expect = 9.2e-90
Identity = 174/214 (81.31%), Postives = 181/214 (84.58%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSLP-PCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLR 60
           MVGALFV GAPV+DS P PCL  DSSPVTNMSLRS GDLVL R+SKAKS+L VS+ VDLR
Sbjct: 1   MVGALFVAGAPVIDSPPCPCLCLDSSPVTNMSLRSRGDLVLPRRSKAKSHLAVSRLVDLR 60

Query: 61  SSFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120
           SSFVN G EWQLSA                   NEFAGQYE+SFDDVKMQI NYFTYKAV
Sbjct: 61  SSFVNSGSEWQLSAXXXXXXXXXXXXXXXXXXXNEFAGQYEESFDDVKMQILNYFTYKAV 120

Query: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180
           KTVLNQLYEMNPTQYRWFY+FVVNHKP +GKRFIRTLVKEKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYDFVVNHKPRDGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

Query: 181 KKCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
           KKCDHAEIYK ISDENLELMRERLMETVIWPSDD
Sbjct: 181 KKCDHAEIYKEISDENLELMRERLMETVIWPSDD 214

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BLAST of CsGy4G013490 vs. TAIR10
Match: AT5G19855.1 (Chaperonin-like RbcX protein)

HSP 1 Score: 219.2 bits (557), Expect = 2.5e-57
Identity = 117/215 (54.42%), Postives = 151/215 (70.23%), Query Frame = 0


Query: 1   MVGALFVVGAPVVD-SLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLR 60
           MV A FVVG+PV+D S  PCL  D+     +              + K  L  +++++L 
Sbjct: 1   MVSAWFVVGSPVMDSSSSPCLCLDAHTTGTI--------------RRKKILGKARNLELG 60

Query: 61  SSFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNE-FAGQYEDSFDDVKMQIQNYFTYKA 120
           SSF      ++LS    R S+   R++++L++VNE  AG Y+D+F DV+ QI NYFTYKA
Sbjct: 61  SSFTGSRIVFRLSP--KRVSRIANRKSKKLLIVNEDVAGNYDDTFGDVQKQIVNYFTYKA 120

Query: 121 VKTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKW 180
           V+TVL+QLYEMNP QY WFYN ++ ++P +GKRF+R L KE Q+LAERVMITRLHLY KW
Sbjct: 121 VRTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITRLHLYGKW 180

Query: 181 VKKCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
           +KKCDH +IY+ ISDENL LMRERLMETVIWPSDD
Sbjct: 181 IKKCDHGKIYQEISDENLALMRERLMETVIWPSDD 199

[Close]

BLAST of CsGy4G013490 vs. Swiss-Prot
Match: sp|Q8L9X2|RBCX2_ARATH (Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCX2 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.5e-56
Identity = 117/215 (54.42%), Postives = 151/215 (70.23%), Query Frame = 0


Query: 1   MVGALFVVGAPVVD-SLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLR 60
           MV A FVVG+PV+D S  PCL  D+     +              + K  L  +++++L 
Sbjct: 1   MVSAWFVVGSPVMDSSSSPCLCLDAHTTGTI--------------RRKKILGKARNLELG 60

Query: 61  SSFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNE-FAGQYEDSFDDVKMQIQNYFTYKA 120
           SSF      ++LS    R S+   R++++L++VNE  AG Y+D+F DV+ QI NYFTYKA
Sbjct: 61  SSFTGSRIVFRLSP--KRVSRIANRKSKKLLIVNEDVAGNYDDTFGDVQKQIVNYFTYKA 120

Query: 121 VKTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKW 180
           V+TVL+QLYEMNP QY WFYN ++ ++P +GKRF+R L KE Q+LAERVMITRLHLY KW
Sbjct: 121 VRTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITRLHLYGKW 180

Query: 181 VKKCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
           +KKCDH +IY+ ISDENL LMRERLMETVIWPSDD
Sbjct: 181 IKKCDHGKIYQEISDENLALMRERLMETVIWPSDD 199

[Close]

BLAST of CsGy4G013490 vs. TrEMBL
Match: tr|A0A0A0KX19|A0A0A0KX19_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291920 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 7.6e-117
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLRS 60
           MVGALFVVGAPVVDSLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLRS
Sbjct: 1   MVGALFVVGAPVVDSLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLRS 60

Query: 61  SFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVK 120
           SFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVK
Sbjct: 61  SFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVK 120

Query: 121 TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK 180
           TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK
Sbjct: 121 TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK 180

Query: 181 KCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
           KCDHAEIYKGISDENLELMRERLMETVIWPSDD
Sbjct: 181 KCDHAEIYKGISDENLELMRERLMETVIWPSDD 213

[Close]

BLAST of CsGy4G013490 vs. TrEMBL
Match: tr|A0A1S3BNA7|A0A1S3BNA7_CUCME (uncharacterized protein LOC103491510 OS=Cucumis melo OX=3656 GN=LOC103491510 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.1e-111
Identity = 203/213 (95.31%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLRS 60
           MVGALFVVGAPV+DS PPC SFDSSPVTNMSLRSGGDLVLQRKSK KSY TVSKSVDLRS
Sbjct: 1   MVGALFVVGAPVIDSPPPCFSFDSSPVTNMSLRSGGDLVLQRKSKTKSYSTVSKSVDLRS 60

Query: 61  SFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVK 120
           SFVN GDEWQLSAGG RQS+RNQRRNRRLV+VNEFAGQYEDSFDDVKMQIQNYFTYKAVK
Sbjct: 61  SFVNFGDEWQLSAGGCRQSRRNQRRNRRLVIVNEFAGQYEDSFDDVKMQIQNYFTYKAVK 120

Query: 121 TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK 180
           TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK
Sbjct: 121 TVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVK 180

Query: 181 KCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
           KCDHAEIYK ISDENLELMRERLMETVIWPSDD
Sbjct: 181 KCDHAEIYKEISDENLELMRERLMETVIWPSDD 213

[Close]

BLAST of CsGy4G013490 vs. TrEMBL
Match: tr|A0A2I4FH68|A0A2I4FH68_9ROSI (uncharacterized protein LOC108998743 OS=Juglans regia OX=51240 GN=LOC108998743 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 7.7e-77
Identity = 152/218 (69.72%), Postives = 178/218 (81.65%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDS-LPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLR 60
           M+GAL V+G+ VVDS   PCL  D+ P TNM+ +SGGDLVL R S  + +     SV+LR
Sbjct: 1   MLGALSVMGSSVVDSHTSPCLCLDALPSTNMNFKSGGDLVLHRNSMTRKHFGKPGSVELR 60

Query: 61  SSFVNLGDEWQLS----AGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFT 120
           SSF++ G E +LS    +G   +S R QR++RRLV+VNE AGQYEDSF+DVK QI NYFT
Sbjct: 61  SSFIDAGRELRLSRKALSGIVNRSTRKQRKDRRLVIVNEVAGQYEDSFEDVKTQILNYFT 120

Query: 121 YKAVKTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLY 180
           YKAV+TVLNQLYEMNPTQYRWFY+FV ++KPGEGKRFIRTL KEKQ+LAERVM+TRLHLY
Sbjct: 121 YKAVRTVLNQLYEMNPTQYRWFYDFVASNKPGEGKRFIRTLGKEKQELAERVMVTRLHLY 180

Query: 181 NKWVKKCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
            KWVK C+HAEIY+ ISDENLELMRERLMETVIWPSDD
Sbjct: 181 GKWVKICNHAEIYQEISDENLELMRERLMETVIWPSDD 218

[Close]

BLAST of CsGy4G013490 vs. TrEMBL
Match: tr|A0A2P4KYF5|A0A2P4KYF5_QUESU (Chaperonin-like rbcx protein 2, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_45414 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.4e-75
Identity = 149/218 (68.35%), Postives = 177/218 (81.19%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDS-LPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLR 60
           MVGAL ++G+ VVDS   PCL  D+ P TNM+L+SGGDLV  R S ++  L    SV+LR
Sbjct: 1   MVGALSIMGSSVVDSHTSPCLCLDALPSTNMNLKSGGDLVFHRNSMSRKRLGKLGSVELR 60

Query: 61  SSFVNLGDEWQLS----AGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFT 120
           SSF++ G E +LS    +G   +S R QR++RR V+VNE  GQYEDSF+DVK QI NYFT
Sbjct: 61  SSFIDSGRELRLSRKALSGIVNRSSRKQRKDRRFVIVNELGGQYEDSFEDVKTQILNYFT 120

Query: 121 YKAVKTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLY 180
           YKAV+TVLNQLYEMNPTQYRWFY+FV ++KP +GKRFIR+L KEKQDLAERVMITRLHLY
Sbjct: 121 YKAVRTVLNQLYEMNPTQYRWFYDFVASNKPNDGKRFIRSLGKEKQDLAERVMITRLHLY 180

Query: 181 NKWVKKCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
            KWVKKC+HAEIY+ ISD+NLELMRERLM+TVIWPSDD
Sbjct: 181 GKWVKKCNHAEIYQEISDQNLELMRERLMDTVIWPSDD 218

[Close]

BLAST of CsGy4G013490 vs. TrEMBL
Match: tr|B9GF05|B9GF05_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G258100v3 PE=4 SV=2)

HSP 1 Score: 291.2 bits (744), Expect = 1.9e-75
Identity = 148/218 (67.89%), Postives = 174/218 (79.82%), Query Frame = 0


Query: 1   MVGALFVVGAPVVD-SLPPCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLR 60
           MVGAL V+G+ VVD    PCL  DS P TN+ L++ GDL LQR S  +  LT   S++L 
Sbjct: 1   MVGALSVMGSSVVDPHTSPCLCLDSLPTTNIGLKNSGDLALQRSSIKRKQLTRPGSLELG 60

Query: 61  SSFVNLGDEWQLS----AGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFT 120
           SSFV+   +W+LS    +G   +S R QR++R LV+V+E AGQYEDSF+DVK Q+ NYFT
Sbjct: 61  SSFVDSWHDWRLSSKAISGIVSKSSRKQRKDRGLVIVSELAGQYEDSFEDVKTQLLNYFT 120

Query: 121 YKAVKTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLY 180
           YKAV+TVLNQLYEMNPTQY WFYNFV ++KPG+GKRF+R LVKEKQDLAERVM+TRLHLY
Sbjct: 121 YKAVRTVLNQLYEMNPTQYTWFYNFVAHNKPGDGKRFLRALVKEKQDLAERVMVTRLHLY 180

Query: 181 NKWVKKCDHAEIYKGISDENLELMRERLMETVIWPSDD 214
            KW+KKCDHAEIYK ISDENLELMRERL ETVIWPSDD
Sbjct: 181 GKWIKKCDHAEIYKEISDENLELMRERLKETVIWPSDD 218

The following BLAST results are available for this feature:

BLAST of CsGy4G013490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142113.1	1.1e-116	100.00	PREDICTED: uncharacterized protein LOC101203881 [Cucumis sativus] >KGN54180.1 hy...	[more]
XP_008449714.1	3.2e-111	95.31	PREDICTED: uncharacterized protein LOC103491510 [Cucumis melo]	[more]
XP_022986709.1	6.5e-96	86.45	chaperonin-like RbcX protein 2, chloroplastic [Cucurbita maxima]	[more]
XP_022148835.1	1.2e-92	82.24	chaperonin-like RbcX protein 2, chloroplastic [Momordica charantia]	[more]
XP_023512052.1	9.2e-90	81.31	chaperonin-like RbcX protein 2, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy4G013490 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19855.1	2.5e-57	54.42	Chaperonin-like RbcX protein	[more]

BLAST of CsGy4G013490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L9X2\|RBCX2_ARATH	4.5e-56	54.42	Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CsGy4G013490 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KX19\|A0A0A0KX19_CUCSA	7.6e-117	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291920 PE=4 SV=1	[more]
tr\|A0A1S3BNA7\|A0A1S3BNA7_CUCME	2.1e-111	95.31	uncharacterized protein LOC103491510 OS=Cucumis melo OX=3656 GN=LOC103491510 PE=...	[more]
tr\|A0A2I4FH68\|A0A2I4FH68_9ROSI	7.7e-77	69.72	uncharacterized protein LOC108998743 OS=Juglans regia OX=51240 GN=LOC108998743 P...	[more]
tr\|A0A2P4KYF5\|A0A2P4KYF5_QUESU	1.4e-75	68.35	Chaperonin-like rbcx protein 2, chloroplastic OS=Quercus suber OX=58331 GN=CFP56...	[more]
tr\|B9GF05\|B9GF05_POPTR	1.9e-75	67.89	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G258100v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR038052	Chaperonin_RbcX_sf
IPR003435	Chaperonin_RcbX

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G013490.1	CsGy4G013490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003435	Chaperonin-like RbcX	PFAM	PF02341	RcbX	coord: 108..206 e-value: 2.4E-20 score: 72.8
IPR003435	Chaperonin-like RbcX	PANTHER	PTHR33791	FAMILY NOT NAMED	coord: 1..213
IPR038052	Chaperonin-like RbcX superfamily	GENE3D	G3DSA:1.10.1200.210		coord: 92..213 e-value: 1.7E-58 score: 197.9
IPR038052	Chaperonin-like RbcX superfamily	SUPERFAMILY	SSF158615	RbcX-like	coord: 98..213
None	No IPR available	PANTHER	PTHR33791:SF9	SUBFAMILY NOT NAMED	coord: 1..213

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G013490	Cla008548	Watermelon (97103) v1	cgybwmB325
CsGy4G013490	ClCG02G023230	Watermelon (Charleston Gray)	cgybwcgB272
CsGy4G013490	CmaCh02G012510	Cucurbita maxima (Rimu)	cgybcmaB525
CsGy4G013490	CmoCh02G012890	Cucurbita moschata (Rifu)	cgybcmoB496
CsGy4G013490	Lsi10G010640	Bottle gourd (USVL1VR-Ls)	cgyblsiB232
CsGy4G013490	Cp4.1LG05g04830	Cucurbita pepo (Zucchini)	cgybcpeB561
CsGy4G013490	Cp4.1LG16g08840	Cucurbita pepo (Zucchini)	cgybcpeB496
CsGy4G013490	Carg02709	Silver-seed gourd	carcgybB0909

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G013490	Watermelon (97103) v2	cgybwmbB273
CsGy4G013490	Wax gourd	cgybwgoB373
CsGy4G013490	Cucurbita maxima (Rimu)	cgybcmaB522
CsGy4G013490	Cucurbita moschata (Rifu)	cgybcmoB493
CsGy4G013490	Cucumber (Chinese Long) v2	cgybcuB167
CsGy4G013490	Melon (DHL92) v3.5.1	cgybmeB249
CsGy4G013490	Melon (DHL92) v3.6.1	cgybmedB247
CsGy4G013490	Watermelon (97103) v1	cgybwmB323
CsGy4G013490	Wild cucumber (PI 183967)	cgybcpiB170
CsGy4G013490	Silver-seed gourd	carcgybB0529
CsGy4G013490	Cucumber (Chinese Long) v3	cgybcucB171