CsGy4G013460 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G013460
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transcription factor MYB46
Location	Chr4 : 18534878 .. 18535612 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGAATGTGTATTAATACTTGTATGTGACTATGTGAATACAGATGGTCTCAAATTGCGGCACGATTACCGGGAAGAACCGATAACGAAATCAAGAATTTTTGGAACTCAACCATTAAAAAGAGGCTCAAGAATTTGTCCTCTACACCATCGCCCAACACCAGCTCCACTGGCTCCCCCTCTACTGACTCAAAACCTAACCTTTTTGGTGGCCTCTTATCAAGTCAAGACCAACAACAACAATCACAAGGCTTAATGGATGAGTTCCCCATCTATGCTTCGGATCCTATTATCGGTCTTGATCCCTTCCCTTTCGTCTCCGCCCATGGTGGACCATTCTTCTCCACCACCACCCCGACCTTCACCACCGGGGTCGAACCGAGTTTTTTCCATGAAGACCATGAGAGTTTCTTTGGCAATCTTCCTCTTTTGCAGAGTGTTAACACCACCACCACCGTCACTGCCACCGCTGTCGTCGAGAGAAGCTTAAAAAGTGAAACCATAGTTAAAGAAGCTAACCATAGTAATTACTTAATTAACAACATCAACTGCCTTGCTAATCATAATAATTTTAGCAACAATAATAATCCAAAGACTACTGATAACAACATTAATGGTGGTGGGGTTGGAGCAAATTTTCTTCATGAGGAATTCTCAATTGGGGAATGGGACTTGGAGGATTTGATGAAAGATGTTCCTTCTTTCCCATGTCTCAATTTTCAAGTCCAATAG

mRNA sequence

ATGGGTAGAATATGGTCTCAAATTGCGGCACGATTACCGGGAAGAACCGATAACGAAATCAAGAATTTTTGGAACTCAACCATTAAAAAGAGGCTCAAGAATTTGTCCTCTACACCATCGCCCAACACCAGCTCCACTGGCTCCCCCTCTACTGACTCAAAACCTAACCTTTTTGGTGGCCTCTTATCAAGTCAAGACCAACAACAACAATCACAAGGCTTAATGGATGAGTTCCCCATCTATGCTTCGGATCCTATTATCGGTCTTGATCCCTTCCCTTTCGTCTCCGCCCATGGTGGACCATTCTTCTCCACCACCACCCCGACCTTCACCACCGGGGTCGAACCGAGTTTTTTCCATGAAGACCATGAGAGTTTCTTTGGCAATCTTCCTCTTTTGCAGAGTGTTAACACCACCACCACCGTCACTGCCACCGCTGTCGTCGAGAGAAGCTTAAAAAGTGAAACCATAGTTAAAGAAGCTAACCATAGTAATTACTTAATTAACAACATCAACTGCCTTGCTAATCATAATAATTTTAGCAACAATAATAATCCAAAGACTACTGATAACAACATTAATGGTGGTGGGGTTGGAGCAAATTTTCTTCATGAGGAATTCTCAATTGGGGAATGGGACTTGGAGGATTTGATGAAAGATGTTCCTTCTTTCCCATGTCTCAATTTTCAAGTCCAATAG

Coding sequence (CDS)

ATGGGTAGAATATGGTCTCAAATTGCGGCACGATTACCGGGAAGAACCGATAACGAAATCAAGAATTTTTGGAACTCAACCATTAAAAAGAGGCTCAAGAATTTGTCCTCTACACCATCGCCCAACACCAGCTCCACTGGCTCCCCCTCTACTGACTCAAAACCTAACCTTTTTGGTGGCCTCTTATCAAGTCAAGACCAACAACAACAATCACAAGGCTTAATGGATGAGTTCCCCATCTATGCTTCGGATCCTATTATCGGTCTTGATCCCTTCCCTTTCGTCTCCGCCCATGGTGGACCATTCTTCTCCACCACCACCCCGACCTTCACCACCGGGGTCGAACCGAGTTTTTTCCATGAAGACCATGAGAGTTTCTTTGGCAATCTTCCTCTTTTGCAGAGTGTTAACACCACCACCACCGTCACTGCCACCGCTGTCGTCGAGAGAAGCTTAAAAAGTGAAACCATAGTTAAAGAAGCTAACCATAGTAATTACTTAATTAACAACATCAACTGCCTTGCTAATCATAATAATTTTAGCAACAATAATAATCCAAAGACTACTGATAACAACATTAATGGTGGTGGGGTTGGAGCAAATTTTCTTCATGAGGAATTCTCAATTGGGGAATGGGACTTGGAGGATTTGATGAAAGATGTTCCTTCTTTCCCATGTCTCAATTTTCAAGTCCAATAG

Protein sequence

MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPNTSSTGSPSTDSKPNLFGGLLSSQDQQQQSQGLMDEFPIYASDPIIGLDPFPFVSAHGGPFFSTTTPTFTTGVEPSFFHEDHESFFGNLPLLQSVNTTTTVTATAVVERSLKSETIVKEANHSNYLINNINCLANHNNFSNNNNPKTTDNNINGGGVGANFLHEEFSIGEWDLEDLMKDVPSFPCLNFQVQ

Homology

[Close]

BLAST of CsGy4G013460 vs. NCBI nr
Match: XP_004142224.1 (PREDICTED: transcription factor MYB82-like [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 8.1e-108
Identity = 229/232 (98.71%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 60
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG
Sbjct: 91  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 150

Query: 61  LLSSQDQQQQSQGLMDEFPIYASDPIIGLDPFPFVSAHGGPFFSTTTPTFTTGVEPSFFH 120
           LLSSQDQQQQSQGLMDEFPIYASDPIIGLDPFPFVSAHGGPFFSTTTPTFTTGVEPSFFH
Sbjct: 151 LLSSQDQQQQSQGLMDEFPIYASDPIIGLDPFPFVSAHGGPFFSTTTPTFTTGVEPSFFH 210

Query: 121 EDHESFFGNLPLLQSVNTTTTVTATAVVERSLKSETIVKEANHSNYLINNINCLAXXXXX 180
           EDHESFFGNLPLLQSVNTTTTVTATAVVERSLKSETIVKEANHSNYLINNINCLAXXXXX
Sbjct: 211 EDHESFFGNLPLLQSVNTTTTVTATAVVERSLKSETIVKEANHSNYLINNINCLAXXXXX 270

Query: 181 XXXXXXXXXXXXINGGGVGANFLHEEFSIGEWDLEDLMKDVPSFPCLNFQVQ 233
           XXXXXXXXXXXXINGGGVGANFLHEEFSIGEWDLEDLMKDVPSFPCLNFQVQ
Sbjct: 271 XXXXXXXXXXXXINGGGVGANFLHEEFSIGEWDLEDLMKDVPSFPCLNFQVQ 322

[Close]

BLAST of CsGy4G013460 vs. NCBI nr
Match: XP_008449719.1 (PREDICTED: transcription factor MYB46 [Cucumis melo])

HSP 1 Score: 366.7 bits (940), Expect = 5.8e-98
Identity = 218/233 (93.56%), Postives = 223/233 (95.71%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 60
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG
Sbjct: 91  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 150

Query: 61  LLSSQDQQQQSQGLMDEFPIYASDPIIGLDPFPFVSAHGGPFFSTTTPTFTTGVEPSFFH 120
           LLS+QDQQQQSQGLMDEFPIYASDPIIGLDPFPF+SAH GPFFSTTT TF TGVEPSFFH
Sbjct: 151 LLSTQDQQQQSQGLMDEFPIYASDPIIGLDPFPFISAHSGPFFSTTTSTF-TGVEPSFFH 210

Query: 121 EDHESFFGNLPLLQSVNTTTTVTATAVVERSLKSETIVKEANHSNYLINNINCLAXXXXX 180
           EDHESFF NLPLLQSVN TTTVTAT VVERSLK+ETIVKEANHSNYLINNINCL XXXXX
Sbjct: 211 EDHESFFSNLPLLQSVNNTTTVTATTVVERSLKNETIVKEANHSNYLINNINCL-XXXXX 270

Query: 181 XXXXXXXXXXXXINGGGVGA-NFLHEEFSIGEWDLEDLMKDVPSFPCLNFQVQ 233
           XXXXXXXXXXXXINGGGVGA NFLHEEFSIGEWDL+DLMKDVPSFPCLNFQVQ
Sbjct: 271 XXXXXXXXXXXXINGGGVGANNFLHEEFSIGEWDLDDLMKDVPSFPCLNFQVQ 321

[Close]

BLAST of CsGy4G013460 vs. NCBI nr
Match: XP_022944574.1 (transcription factor MYB46-like [Cucurbita moschata])

HSP 1 Score: 226.5 bits (576), Expect = 9.4e-56
Identity = 138/237 (58.23%), Postives = 146/237 (61.60%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 60
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSP            K   FGG
Sbjct: 87  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPNTSSAGSPSDNSKSIPFGG 146

Query: 61  LLSSQD-QQQQSQGLMDEFPIYASDP---IIGLDPFPFVSAHGGPFFSTTTPTFTTGVEP 120
           LLS+QD QQQQ QGL+D +PIYASDP   II LDPF               PTFT   EP
Sbjct: 147 LLSTQDYQQQQQQGLID-YPIYASDPSPSIIALDPF---------------PTFTAEAEP 206

Query: 121 SFFHEDHESFFGNLPLLQSVNTTTTVTATAVVERSLKSETIVKEANHSNYLINNINCLAX 180
            FF E H+SFF NLP+LQ VN     T               KEANH NYLI+NINCLA 
Sbjct: 207 GFFLE-HDSFFNNLPVLQRVN-----TXXXXXXXXXXXXXXXKEANHGNYLISNINCLAN 266

Query: 181 XXXXXXXXXXXXXXXXINGGGVGANFLHEEFSIGEWDLEDLMKDVPS-FPCLNFQVQ 233
                              GGVG NF+HEEFSIGEWDLEDLMKDVPS FP LNFQVQ
Sbjct: 267 HNNNTNNNPKIENV----NGGVGPNFVHEEFSIGEWDLEDLMKDVPSCFPYLNFQVQ 297

[Close]

BLAST of CsGy4G013460 vs. NCBI nr
Match: XP_022148823.1 (transcription factor MYB46-like [Momordica charantia])

HSP 1 Score: 223.0 bits (567), Expect = 1.0e-54
Identity = 154/239 (64.44%), Postives = 169/239 (70.71%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 60
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSST SP            K  LF G
Sbjct: 91  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTSSP-NTSSGSPSGDSKSTLFTG 150

Query: 61  LLSSQDQQQQSQGLMDEFPIYASDP---IIGLDPFPFV-SAHGGPFFS-TTTPTFTTGVE 120
           LLS QDQQ        +FPIY +DP    + LD FP + +AHGGPFFS  T PTFT G+E
Sbjct: 151 LLSVQDQQG------FDFPIYTADPSPSALALDTFPLLATAHGGPFFSAATAPTFTGGIE 210

Query: 121 PSFFHEDHESFFGNLPLLQSVNTTTTVTATAVVERSLKSETIVKEANHSNYLINNIN-CL 180
           P+ F  D +SFF NLPLLQ+VNTT         E SLK+ETI+KE NHSNYLINN+N  L
Sbjct: 211 PALF-RDEDSFF-NLPLLQNVNTT---------EGSLKTETIIKETNHSNYLINNMNSVL 270

Query: 181 AXXXXXXXXXXXXXXXXXINGGGVGANFLHEEFSIGEWDLEDLMKDVP-SFPCLNFQVQ 233
            XXXXXXXXXXXXXXXXX         +L EEFSIGEWDL+DLMKDVP SFPCLNFQVQ
Sbjct: 271 PXXXXXXXXXXXXXXXXXXXXXXXXXXYLQEEFSIGEWDLDDLMKDVPSSFPCLNFQVQ 311

[Close]

BLAST of CsGy4G013460 vs. NCBI nr
Match: XP_022995117.1 (transcription factor MYB46-like [Cucurbita maxima])

HSP 1 Score: 222.2 bits (565), Expect = 1.8e-54
Identity = 132/236 (55.93%), Postives = 145/236 (61.44%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 60
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSP            K NLF  
Sbjct: 94  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSP-NTSSDSPSGDSKSNLFPT 153

Query: 61  LLSSQDQQQQSQGLMDEFPIYASDP---IIGLDPFPFVS-AHGGPFFSTTTPTFTTGVEP 120
            L  QDQQQQ   +  +FPI+A+DP   +I LDPFP +S  HG PFF +  PTFT GVE 
Sbjct: 154 FLLGQDQQQQQNSI--DFPIFAADPSPSVIALDPFPLLSTTHGIPFFPSAAPTFTGGVEM 213

Query: 121 SFFHEDHESFFGNLPLLQSVNTTTTVTATAVVERSLKSETIVKEANHSNYLINNINCLAX 180
            F+ ED +SFF NLPLLQSVN                      E  HSNYLINN      
Sbjct: 214 GFYRED-DSFF-NLPLLQSVNXXXXXXXXXXXXGG--------ETKHSNYLINN------ 273

Query: 181 XXXXXXXXXXXXXXXXINGGGVGANFLHEEFSIGEWDLEDLMKDVPSFPCLNFQVQ 233
                              GGVGANF+HEEFS+GEW+LEDLMKDVPSFPCLNFQVQ
Sbjct: 274 -----------NPKMESMNGGVGANFIHEEFSMGEWELEDLMKDVPSFPCLNFQVQ 299

[Close]

BLAST of CsGy4G013460 vs. TAIR10
Match: AT5G12870.1 (myb domain protein 46)

HSP 1 Score: 71.2 bits (173), Expect = 9.2e-13
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSST 39
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLK +S T
Sbjct: 91  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKKMSDT 128

[Close]

BLAST of CsGy4G013460 vs. TAIR10
Match: AT1G09540.1 (myb domain protein 61)

HSP 1 Score: 62.0 bits (149), Expect = 5.6e-10
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPS 41
           +G  WSQIA+RLPGRTDNEIKN WNS+IKK+LK     P+
Sbjct: 85  LGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRGIDPN 124

[Close]

BLAST of CsGy4G013460 vs. TAIR10
Match: AT5G26660.1 (myb domain protein 86)

HSP 1 Score: 61.2 bits (147), Expect = 9.5e-10
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPS 41
           +G  WSQIA RLPGRTDNEIKNFWNS +KK+L+     P+
Sbjct: 85  LGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKGIDPT 124

[Close]

BLAST of CsGy4G013460 vs. TAIR10
Match: AT1G57560.1 (myb domain protein 50)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-09
Identity = 27/39 (69.23%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTP 40
           +G  WSQIAARLPGRTDNEIKN WNS IKK+L      P
Sbjct: 85  LGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKGIDP 123

[Close]

BLAST of CsGy4G013460 vs. TAIR10
Match: AT3G08500.1 (myb domain protein 83)

HSP 1 Score: 59.3 bits (142), Expect = 3.6e-09
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKK 31
           +G  WSQIA RLPGRTDNEIKNFWNST+KK
Sbjct: 103 LGNRWSQIATRLPGRTDNEIKNFWNSTLKK 132

[Close]

BLAST of CsGy4G013460 vs. Swiss-Prot
Match: sp|Q9LXV2|MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana OX=3702 GN=MYB46 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-11
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSST 39
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLK +S T
Sbjct: 91  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKKMSDT 128

[Close]

BLAST of CsGy4G013460 vs. Swiss-Prot
Match: sp|Q8VZQ2|MYB61_ARATH (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPS 41
           +G  WSQIA+RLPGRTDNEIKN WNS+IKK+LK     P+
Sbjct: 85  LGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRGIDPN 124

[Close]

BLAST of CsGy4G013460 vs. Swiss-Prot
Match: sp|Q8LPH6|MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.7e-08
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPS 41
           +G  WSQIA RLPGRTDNEIKNFWNS +KK+L+     P+
Sbjct: 85  LGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKGIDPT 124

[Close]

BLAST of CsGy4G013460 vs. Swiss-Prot
Match: sp|P20027|MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 60.5 bits (145), Expect = 2.9e-08
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPS 41
           +G  WSQIA+ LPGRTDNEIKNFWNS IKK+L+     P+
Sbjct: 87  LGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPA 126

[Close]

BLAST of CsGy4G013460 vs. Swiss-Prot
Match: sp|Q9M0Y5|MYB74_ARATH (Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.5e-08
Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTP 40
           MG  WS IAARLPGRTDNEIKN+WN+ I+KRL  +   P
Sbjct: 86  MGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLKMGIDP 124

[Close]

BLAST of CsGy4G013460 vs. TrEMBL
Match: tr|A0A1S3BNB2|A0A1S3BNB2_CUCME (transcription factor MYB46 OS=Cucumis melo OX=3656 GN=LOC103491515 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 3.9e-98
Identity = 218/233 (93.56%), Postives = 223/233 (95.71%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 60
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG
Sbjct: 91  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 150

Query: 61  LLSSQDQQQQSQGLMDEFPIYASDPIIGLDPFPFVSAHGGPFFSTTTPTFTTGVEPSFFH 120
           LLS+QDQQQQSQGLMDEFPIYASDPIIGLDPFPF+SAH GPFFSTTT TF TGVEPSFFH
Sbjct: 151 LLSTQDQQQQSQGLMDEFPIYASDPIIGLDPFPFISAHSGPFFSTTTSTF-TGVEPSFFH 210

Query: 121 EDHESFFGNLPLLQSVNTTTTVTATAVVERSLKSETIVKEANHSNYLINNINCLAXXXXX 180
           EDHESFF NLPLLQSVN TTTVTAT VVERSLK+ETIVKEANHSNYLINNINCL XXXXX
Sbjct: 211 EDHESFFSNLPLLQSVNNTTTVTATTVVERSLKNETIVKEANHSNYLINNINCL-XXXXX 270

Query: 181 XXXXXXXXXXXXINGGGVGA-NFLHEEFSIGEWDLEDLMKDVPSFPCLNFQVQ 233
           XXXXXXXXXXXXINGGGVGA NFLHEEFSIGEWDL+DLMKDVPSFPCLNFQVQ
Sbjct: 271 XXXXXXXXXXXXINGGGVGANNFLHEEFSIGEWDLDDLMKDVPSFPCLNFQVQ 321

[Close]

BLAST of CsGy4G013460 vs. TrEMBL
Match: tr|A0A0R4J4P2|A0A0R4J4P2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786151 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.7e-25
Identity = 94/262 (35.88%), Postives = 126/262 (48.09%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 60
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLKN+SS  SP              N+  G
Sbjct: 93  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNMSSNTSPNGSESSYEPNNRDLNM-AG 152

Query: 61  LLSSQDQQQQSQGLMDEFPIYASDPIIG-------LDPFPFVSAHG------GPFFSTTT 120
             +S  Q QQ    M  F   +  P +        +D  P +  HG      G FF++T 
Sbjct: 153 FTTSNTQDQQHADFMPMFNSSSQSPSMHAMVLNSIIDRLPMLE-HGLNMPCSGGFFNSTG 212

Query: 121 PTFT---TGVEPSFFHEDHESFFGN----------LPLLQSVNTTTTVTATAVVERSLKS 180
           P F+   +GV+    + ++   FG+          +P L+SV+TT+        + +LK 
Sbjct: 213 PCFSSSQSGVDNKGIYLENGGVFGSVNIGAEGDVYVPPLESVSTTS--------DHNLKV 272

Query: 181 ETIVKEANHSNY-------LINNINCLAXXXXXXXXXXXXXXXXXINGGGVGANFLHEEF 230
           E+      +++Y       L+NN N  +                  N  G   N   EE 
Sbjct: 273 ESTCNTDTNNSYFDDINSILLNNCNINSNNKRAE------------NRAGGVENLFQEEL 332

[Close]

BLAST of CsGy4G013460 vs. TrEMBL
Match: tr|K7LPK7|K7LPK7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100785810 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 9.7e-25
Identity = 97/258 (37.60%), Postives = 127/258 (49.22%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 60
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSS  SP              N+ G 
Sbjct: 90  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSNTSPNGSESSYEPNNKDLNMAGF 149

Query: 61  LLSSQDQQQQSQGLMDEFPIYASDPIIG--------LDPFPFVSAHG------GPFFSTT 120
             S+  Q QQ    M  F   +  P +         +D  P +  HG      G FF++ 
Sbjct: 150 TTSNTQQNQQHADFMPMFNSSSQSPSMHATTVLNSIIDRLPMLE-HGLNMTSSGGFFNSK 209

Query: 121 TPTFT---TGVEPS-FFHEDHESFFGN----------LPLLQSVNTTTTVTATAVVERSL 180
            P F+   +GV+ +  F+ ++   FG+          +P L+SV+TT+          +L
Sbjct: 210 GPCFSSSQSGVDNNKGFYLENGGVFGSVNIGAEGDMYVPPLESVSTTSD-------HYNL 269

Query: 181 KSE-TIVKEANHSNYLINNINCLAXXXXXXXXXXXXXXXXXINGGGVGANFLHEEFSIGE 230
           K E T   + N+SNY  ++IN +                   N  G   N   EE +IGE
Sbjct: 270 KLESTCNTDTNNSNY-FDDINSIILNNCNINNSNNIKRAE--NRAGGVENLFQEELTIGE 329

[Close]

BLAST of CsGy4G013460 vs. TrEMBL
Match: tr|A0A2N9IV16|A0A2N9IV16_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56006 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.8e-24
Identity = 92/251 (36.65%), Postives = 119/251 (47.41%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 60
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSP              ++ GG
Sbjct: 94  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSP-----NTSDSSSPKDVMGG 153

Query: 61  LLSSQDQ--------QQQSQGLMDEFPI--YASDPIIGLDPFPFVSAHGGPFFSTTTPTF 120
           L+S Q+Q           S   M    +  +  DPI+ +       +     +    P +
Sbjct: 154 LMSMQEQGLMPMYMDSSSSSNSMQTMALNGHMIDPILPMLQHSLNLSTNASGYFNAAPQY 213

Query: 121 TT--GVEPSFFHEDHESFFG--------NLPLLQSVNTTTTVTATAVVERSLKSETIVKE 180
            T  GV    F+  +  F G         +P L+S+           +E ++K+E + K 
Sbjct: 214 MTQIGVSGDGFYGGNGVFGGVDFGLEGEFVPPLESIG----------IEENIKTENMYKR 273

Query: 181 ANHSNYLINNINCLAXXXXXXXXXXXXXXXXXINGGGVGANFLHEEFSIGEWDLEDLMKD 232
             + N L NN+N                     N   VG     EE  +GEWDLE+LMKD
Sbjct: 274 TMNGNTL-NNMN--------------NYHNRAENLARVGNYCEGEELRMGEWDLEELMKD 314

[Close]

BLAST of CsGy4G013460 vs. TrEMBL
Match: tr|A0A072UKG9|A0A072UKG9_MEDTR (Myb transcription factor OS=Medicago truncatula OX=3880 GN=25492565 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 7.0e-23
Identity = 93/258 (36.05%), Postives = 122/258 (47.29%), Query Frame = 0


Query: 1   MGRIWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTPSPXXXXXXXXXXXXKPNLFGG 60
           +G  WSQIAARLPGRTDNEIKNFWNSTIKKRLKN+S   SP              N+ G 
Sbjct: 90  LGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNMSLNTSPNASDESSYDPNKDHNMGGF 149

Query: 61  LLSS-QDQQQQSQGLMDEFPIYA-SDPIIGLDPF-PFVSAHGGPFFSTTTPTFTTGVEPS 120
           + SS QDQQ      M  F   + S P +    F   +S  G  FF+ +    TTG   S
Sbjct: 150 ITSSTQDQQHIDNHFMPMFNTSSPSPPTMQNTVFNTIMSGSGCGFFNNS----TTGTYLS 209

Query: 121 FFHEDHESF-----FG----------------NLPLLQSVNTTTTVTATAVVERSLKSET 180
             + D +SF     FG                N+P L+SVN+T T   +  +E +   E 
Sbjct: 210 QNNHDSKSFYLEKVFGSVNIINGVEGDEMEIYNVPPLESVNSTITSEHSVKMENACNGED 269

Query: 181 IVKEANH-----SNYLINNINCLAXXXXXXXXXXXXXXXXXINGGGVGANFLHEEFSIGE 230
               +++     +N +INN N ++                         N  H + S+G+
Sbjct: 270 GNYNSSYNFDDINNIVINNCNVVSKRSENRVDDEV-------------ENLFHGDLSVGD 329

The following BLAST results are available for this feature:

BLAST of CsGy4G013460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142224.1	8.1e-108	98.71	PREDICTED: transcription factor MYB82-like [Cucumis sativus]	[more]
XP_008449719.1	5.8e-98	93.56	PREDICTED: transcription factor MYB46 [Cucumis melo]	[more]
XP_022944574.1	9.4e-56	58.23	transcription factor MYB46-like [Cucurbita moschata]	[more]
XP_022148823.1	1.0e-54	64.44	transcription factor MYB46-like [Momordica charantia]	[more]
XP_022995117.1	1.8e-54	55.93	transcription factor MYB46-like [Cucurbita maxima]	[more]

BLAST of CsGy4G013460 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12870.1	9.2e-13	84.21	myb domain protein 46	[more]
AT1G09540.1	5.6e-10	67.50	myb domain protein 61	[more]
AT5G26660.1	9.5e-10	65.00	myb domain protein 86	[more]
AT1G57560.1	2.8e-09	69.23	myb domain protein 50	[more]
AT3G08500.1	3.6e-09	83.33	myb domain protein 83	[more]

BLAST of CsGy4G013460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LXV2\|MYB46_ARATH	1.7e-11	84.21	Transcription factor MYB46 OS=Arabidopsis thaliana OX=3702 GN=MYB46 PE=2 SV=1	[more]
sp\|Q8VZQ2\|MYB61_ARATH	1.0e-08	67.50	Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1	[more]
sp\|Q8LPH6\|MYB86_ARATH	1.7e-08	65.00	Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1	[more]
sp\|P20027\|MYB3_HORVU	2.9e-08	65.00	Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3	[more]
sp\|Q9M0Y5\|MYB74_ARATH	6.5e-08	66.67	Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1	[more]

BLAST of CsGy4G013460 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BNB2\|A0A1S3BNB2_CUCME	3.9e-98	93.56	transcription factor MYB46 OS=Cucumis melo OX=3656 GN=LOC103491515 PE=4 SV=1	[more]
tr\|A0A0R4J4P2\|A0A0R4J4P2_SOYBN	5.7e-25	35.88	Uncharacterized protein OS=Glycine max OX=3847 GN=100786151 PE=4 SV=1	[more]
tr\|K7LPK7\|K7LPK7_SOYBN	9.7e-25	37.60	Uncharacterized protein OS=Glycine max OX=3847 GN=100785810 PE=4 SV=1	[more]
tr\|A0A2N9IV16\|A0A2N9IV16_FAGSY	4.8e-24	36.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56006 PE=4 SV=1	[more]
tr\|A0A072UKG9\|A0A072UKG9_MEDTR	7.0e-23	36.05	Myb transcription factor OS=Medicago truncatula OX=3880 GN=25492565 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G013460.1	CsGy4G013460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 1..54 e-value: 7.5E-12 score: 47.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..69
None	No IPR available	PANTHER	PTHR10641:SF577	TRANSCRIPTION FACTOR MYB46	coord: 2..79
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 2..79
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 5..26 e-value: 1.1E-5 score: 25.4
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 5..25 e-value: 1.67624E-5 score: 39.8662
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..32 score: 15.3
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 5..34

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G013460	Cla008544	Watermelon (97103) v1	cgybwmB323
CsGy4G013460	MELO3C014597	Melon (DHL92) v3.5.1	cgybmeB249
CsGy4G013460	ClCG02G023270	Watermelon (Charleston Gray)	cgybwcgB272
CsGy4G013460	CSPI04G13880	Wild cucumber (PI 183967)	cgybcpiB170
CsGy4G013460	CmaCh20G000800	Cucurbita maxima (Rimu)	cgybcmaB522
CsGy4G013460	CmoCh02G012850	Cucurbita moschata (Rifu)	cgybcmoB496
CsGy4G013460	CmoCh20G000840	Cucurbita moschata (Rifu)	cgybcmoB493
CsGy4G013460	Lsi10G010600	Bottle gourd (USVL1VR-Ls)	cgyblsiB232
CsGy4G013460	Cp4.1LG16g08960	Cucurbita pepo (Zucchini)	cgybcpeB496
CsGy4G013460	MELO3C014597.2	Melon (DHL92) v3.6.1	cgybmedB247
CsGy4G013460	CsaV3_4G024230	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G013460	Cla97C02G049360	Watermelon (97103) v2	cgybwmbB273
CsGy4G013460	Bhi10G000237	Wax gourd	cgybwgoB373
CsGy4G013460	Carg02712	Silver-seed gourd	carcgybB0909
CsGy4G013460	Carg06907	Silver-seed gourd	carcgybB0529

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G013460	Cucurbita maxima (Rimu)	cgybcmaB525
CsGy4G013460	Cucurbita pepo (Zucchini)	cgybcpeB561
CsGy4G013460	Cucumber (Chinese Long) v2	cgybcuB167
CsGy4G013460	Watermelon (97103) v1	cgybwmB325