CsGy4G013350 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTAATTTTAAATTAACTAAACTGAGTCGGGTAGTCCGGGCTAACTACCAAACGAAGAGGAATATTTGGGTTGGTCTGAAAATTGAGTTAACCGAGCCCACGAGGCTGAATTTGAGTTTCGAAAAGCCCATTTGTTGGTGTTGGGCTTGAAGAACTCTGAAGACCCGAGGGGTATTTTTCTCTTGAAAGTGCACAAGATCTGCTGACCCTTATTCCCTCCCTTTCTTCCTTTTTATCTCGTTCCTCTCTCCTGCTTCTCGCATTTCTCTTCCGGCCACCGCACGCTGCCCCTCCGATCCACCTTCCTTCGACGCCGCCCTCCTCAATATCACTTCACTGGAGAAGTCTCGCGGTGATTTTGCGCGGTCTGCTACCTCAACGCCGCGTTAAAACCACCGTTTCGACGCTGCTAATTTAAGCGAGTTTTTGGGGCGATCTTGTTCAGGTAACTCTGTTAGTTCATTGTTACAATTGCTTTTCAAGTAAGTGGCATTACTTATCGAAAGCCTTTGGCTTGGTTGGACACTTTTTTTTCTTCTTTTGGTATGTGTTCTGTGTTATGTGCCGTGAACATTGAATTTGTTTAATATGTGTATTTTGAATTTTGATTAATGGGGTGGTTGTGTTAATTATTTTACTTGGATGTAAAGAACGAGTGTTCTATGTGCTATGCGTTTTGAATTTGTTGATATGTGATCTGATTATGTGGCGTGGATGTCTGAATTACATTACTTGTTTGTGGTTTGAGCATCTTACGTTACATGCATGTAGATGATACCTTTTTTTTAGTTTTAAGTACATGGAAACCGGCGGCGGCGGCGGCTACTAAAACTTGGCATAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGACTGCATCCAAATCTGATGATATCTACCTTAAGTTACTCGTCCAGCTTTACCGCTTCCTTGTCCGTCAGACTGGAAGCAATTTCGATGCTGTGATTCTCTAG ATGACTAATTTTAAATTAACTAAACTGAGTCGGGTAGTCCGGGCTAACTACCAAACGAAGAGGAATATTTGGTGCACAAGATCTGCTGACCCTTATTCCCTCCCTTTCTTCCTTTTTATCTCGTTCCTCTCTCCTGCTTCTCGCATTTCTCTTCCGGCCACCGCACGCTGCCCCTCCGATCCACCTTCCTTCGACGCCGCCCTCCTCAATATCACTTCACTGGAGAAGTCTCGCGGTGATTTTGCGCGGTCTGCTACCTCAACGCCGCTACATGGAAACCGGCGGCGGCGGCGGCTACTAAAACTTGGCATAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGACTGCATCCAAATCTGATGATATCTACCTTAAGTTACTCGTCCAGCTTTACCGCTTCCTTGTCCGTCAGACTGGAAGCAATTTCGATGCTGTGATTCTCTAG ATGACTAATTTTAAATTAACTAAACTGAGTCGGGTAGTCCGGGCTAACTACCAAACGAAGAGGAATATTTGGTGCACAAGATCTGCTGACCCTTATTCCCTCCCTTTCTTCCTTTTTATCTCGTTCCTCTCTCCTGCTTCTCGCATTTCTCTTCCGGCCACCGCACGCTGCCCCTCCGATCCACCTTCCTTCGACGCCGCCCTCCTCAATATCACTTCACTGGAGAAGTCTCGCGGTGATTTTGCGCGGTCTGCTACCTCAACGCCGCTACATGGAAACCGGCGGCGGCGGCGGCTACTAAAACTTGGCATAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGACTGCATCCAAATCTGATGATATCTACCTTAAGTTACTCGTCCAGCTTTACCGCTTCCTTGTCCGTCAGACTGGAAGCAATTTCGATGCTGTGATTCTCTAG MTNFKLTKLSRVVRANYQTKRNIWCTRSADPYSLPFFLFISFLSPASRISLPATARCPSDPPSFDAALLNITSLEKSRGDFARSATSTPLHGNRRRRRLLKLGIAGGKSKKTKRTASKSDDIYLKLLVQLYRFLVRQTGSNFDAVIL
BLAST of CsGy4G013350 vs. NCBI nr
Match: XP_023531430.1 (60S ribosomal protein L18-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 80.1 bits (196), Expect = 6.9e-12 Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of CsGy4G013350 vs. NCBI nr
Match: XP_004144773.1 (PREDICTED: 60S ribosomal protein L18-3 [Cucumis sativus] >KGN60965.1 hypothetical protein Csa_2G032220 [Cucumis sativus]) HSP 1 Score: 79.7 bits (195), Expect = 9.0e-12 Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of CsGy4G013350 vs. NCBI nr
Match: XP_008454015.1 (PREDICTED: 60S ribosomal protein L18-3 [Cucumis melo]) HSP 1 Score: 79.7 bits (195), Expect = 9.0e-12 Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of CsGy4G013350 vs. NCBI nr
Match: XP_010546736.1 (PREDICTED: 60S ribosomal protein L18-3 [Tarenaya hassleriana]) HSP 1 Score: 79.7 bits (195), Expect = 9.0e-12 Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of CsGy4G013350 vs. NCBI nr
Match: XP_010524859.1 (PREDICTED: 60S ribosomal protein L18-3 [Tarenaya hassleriana]) HSP 1 Score: 79.7 bits (195), Expect = 9.0e-12 Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of CsGy4G013350 vs. TAIR10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein) HSP 1 Score: 75.9 bits (185), Expect = 2.4e-14 Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = 0
BLAST of CsGy4G013350 vs. TAIR10
Match: AT3G05590.1 (ribosomal protein L18) HSP 1 Score: 71.6 bits (174), Expect = 4.5e-13 Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 0
BLAST of CsGy4G013350 vs. Swiss-Prot
Match: sp|Q940B0|RL183_ARATH (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.3e-13 Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = 0
BLAST of CsGy4G013350 vs. Swiss-Prot
Match: sp|P42791|RL182_ARATH (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 8.0e-12 Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 0
BLAST of CsGy4G013350 vs. Swiss-Prot
Match: sp|O65729|RL18_CICAR (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11 Identity = 35/43 (81.40%), Postives = 41/43 (95.35%), Query Frame = 0
BLAST of CsGy4G013350 vs. Swiss-Prot
Match: sp|O22254|RL181_ARATH (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3) HSP 1 Score: 65.9 bits (159), Expect = 4.4e-10 Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of CsGy4G013350 vs. Swiss-Prot
Match: sp|P09897|RL18A_XENLA (60S ribosomal protein L18-A OS=Xenopus laevis OX=8355 GN=rpl18-a PE=2 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 8.6e-06 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of CsGy4G013350 vs. TrEMBL
Match: tr|A0A200QSM6|A0A200QSM6_9MAGN (Ribosomal protein L18e OS=Macleaya cordata OX=56857 GN=BVC80_8775g29 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.0e-12 Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of CsGy4G013350 vs. TrEMBL
Match: tr|A0A1S3BYV3|A0A1S3BYV3_CUCME (60S ribosomal protein L18-3 OS=Cucumis melo OX=3656 GN=LOC103494561 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.0e-12 Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of CsGy4G013350 vs. TrEMBL
Match: tr|A0A0A0LFX7|A0A0A0LFX7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G032220 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.0e-12 Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of CsGy4G013350 vs. TrEMBL
Match: tr|A0A0D3AXB3|A0A0D3AXB3_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 GN=106301699 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 7.8e-12 Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0
BLAST of CsGy4G013350 vs. TrEMBL
Match: tr|M4F6A2|M4F6A2_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 7.8e-12 Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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