CsGy4G013110 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTATATGGGTACTGTAGTTGTTACTGTGATACCGAAAAAGAACGAACAATTTCCTTAGGTCGAAATAATATATCTCAAGTTTGCTAGCGTCGAATTGGATTCGAGTAAGTCCTCATCTTCTCTCTTTAATTATTAATTTATATATGTTTTCCTACACTGCTAATGTAACCTATATATATTCTTCTGATGTAAACTGATTTAATAATATACATACGTACATACACAGATGAACAGCCAAAGGAATTTATCAAATGTGAGGCTCAATTACAAGAAGTTGATGAATTGGTGGAGTACAAGAAGTACAAAGGTGATATTAAGGTTGCCGAAGGTTTTGGGAAGATTGGAGCAGTGATTGTTGAACTGCAAGACGGTGTGAATGAGAGGTTTGTCGACACCATTTCTGTTGAGGCCGAAAAGCCTCCAATCTCGGTTACGTTTAGCTGCAAATCATTGGTGCAACCCAAGGGTCTTATTGACCACCGAAGGATCTTCTTTTCTTCCAACAAGGTGATTTATATAAATTGATTCAATATTATGGATCAAATATTTAAAATATTGATCTTCATGGAAATATAAAGTTATGACAATTTCATAAAATATTTTATTATGAAATATTTTAAAATACATGAAAAAAAATGAAACGTAAAATATTTACAAAATACAACAAGATATGGTAGATTATGTCCATTATTTTGATATTGATTTTTTTTTTTTTTTTTTTGTGTTTAACATTTTTTCAACACTACAATAGAAATATCAAATTCATCTCCCGTCTCTATATCAAACCTAAGCAAATGTTGAAATATGAATGAAAATATTGACAAATGGATGAAAATTTAATACAATTTTGTAAGACTAATTAATAATTGAATATGGGGATGGATGCAGTCTTATTTGTCGGGAAAAACACCAGGAGGACTGGTGAAGCTAAGAGAAGAAGACCTTGCAAATCTGAGAGGCGAAAAAGCAGATGGATCAGTAGATAGAAATGAGCGTAAGGCGTTTGAAAGAATTTATGATTACGACCTGTACAACGACCTCGGAGATCCCGACCAGTCAATGAATATGAAAAGGCCTGTTCTTGGTGGTTCAGAGGAGTATCCTTATCCTCGACGTTGTAGAACTGGTCGTCCTCCTACTCAAAATAGTATCTTAATTTTCTAAATCCTTCCTTGTTAATTTAATATTCTACACTATACATATACATACATATATATATTTATATATATATATATATATATACATATATATATATAATATATTAATGGATGTGTTTGGCCGTACAATTGGGATTTAGATCCAGCATCAGAGAAAAGGATTGAAGAATGGTTTTATGTTCCGCGAGACGAAGAATTTTCAGAGATAAAGCAAAGTAGTAGTCAACCAGGAAACGAGAAATTGTTGCGAAAATCTCCTTTCTCTGACCTTCCTGAACTTGAGATTAAAACACCTTCCGCTGCTTCCAAATTTAATCTTCAATTTAATATAGCATCCATACTTTCCTCTCATCGGCCACCTGCTCTTAAGTCATCAGATACGCCCAGTAGCACTCTCGTTGAACTTCCACCACTAGAGTCCTACAAGAGTGAGTATATATGTTTATGA ATGAGTTATATGGATGAACAGCCAAAGGAATTTATCAAATGTGAGGCTCAATTACAAGAAGTTGATGAATTGGTGGAGTACAAGAAGTACAAAGGTGATATTAAGGTTGCCGAAGGTTTTGGGAAGATTGGAGCAGTGATTGTTGAACTGCAAGACGGTGTGAATGAGAGGTTTGTCGACACCATTTCTGTTGAGGCCGAAAAGCCTCCAATCTCGGTTACGTTTAGCTGCAAATCATTGGTGCAACCCAAGGATCCAGCATCAGAGAAAAGGATTGAAGAATGGTTTTATGTTCCGCGAGACGAAGAATTTTCAGAGATAAAGCAAAGTAGTAGTCAACCAGGAAACGAGAAATTGTTGCGAAAATCTCCTTTCTCTGACCTTCCTGAACTTGAGATTAAAACACCTTCCGCTGCTTCCAAATTTAATCTTCAATTTAATATAGCATCCATACTTTCCTCTCATCGGCCACCTGCTCTTAAGTCATCAGATACGCCCAGTAGCACTCTCGTTGAACTTCCACCACTAGAGTCCTACAAGAGTGAGTATATATGTTTATGA ATGAGTTATATGGATGAACAGCCAAAGGAATTTATCAAATGTGAGGCTCAATTACAAGAAGTTGATGAATTGGTGGAGTACAAGAAGTACAAAGGTGATATTAAGGTTGCCGAAGGTTTTGGGAAGATTGGAGCAGTGATTGTTGAACTGCAAGACGGTGTGAATGAGAGGTTTGTCGACACCATTTCTGTTGAGGCCGAAAAGCCTCCAATCTCGGTTACGTTTAGCTGCAAATCATTGGTGCAACCCAAGGATCCAGCATCAGAGAAAAGGATTGAAGAATGGTTTTATGTTCCGCGAGACGAAGAATTTTCAGAGATAAAGCAAAGTAGTAGTCAACCAGGAAACGAGAAATTGTTGCGAAAATCTCCTTTCTCTGACCTTCCTGAACTTGAGATTAAAACACCTTCCGCTGCTTCCAAATTTAATCTTCAATTTAATATAGCATCCATACTTTCCTCTCATCGGCCACCTGCTCTTAAGTCATCAGATACGCCCAGTAGCACTCTCGTTGAACTTCCACCACTAGAGTCCTACAAGAGTGAGTATATATGTTTATGA MSYMDEQPKEFIKCEAQLQEVDELVEYKKYKGDIKVAEGFGKIGAVIVELQDGVNERFVDTISVEAEKPPISVTFSCKSLVQPKDPASEKRIEEWFYVPRDEEFSEIKQSSSQPGNEKLLRKSPFSDLPELEIKTPSAASKFNLQFNIASILSSHRPPALKSSDTPSSTLVELPPLESYKSEYICL
BLAST of CsGy4G013110 vs. NCBI nr
Match: KGN54133.1 (hypothetical protein Csa_4G287550 [Cucumis sativus]) HSP 1 Score: 320.1 bits (819), Expect = 5.0e-84 Identity = 173/208 (83.17%), Postives = 174/208 (83.65%), Query Frame = 0
BLAST of CsGy4G013110 vs. NCBI nr
Match: XP_011653578.1 (PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 291.2 bits (744), Expect = 2.5e-75 Identity = 172/278 (61.87%), Postives = 174/278 (62.59%), Query Frame = 0
BLAST of CsGy4G013110 vs. NCBI nr
Match: XP_004142238.2 (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60 Identity = 144/280 (51.43%), Postives = 164/280 (58.57%), Query Frame = 0
BLAST of CsGy4G013110 vs. NCBI nr
Match: KGN54129.1 (hypothetical protein Csa_4G287020 [Cucumis sativus]) HSP 1 Score: 157.1 bits (396), Expect = 5.6e-35 Identity = 91/156 (58.33%), Postives = 113/156 (72.44%), Query Frame = 0
BLAST of CsGy4G013110 vs. NCBI nr
Match: XP_008449947.1 (PREDICTED: lipoxygenase 2, chloroplastic-like, partial [Cucumis melo]) HSP 1 Score: 147.5 bits (371), Expect = 4.5e-32 Identity = 76/92 (82.61%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of CsGy4G013110 vs. TrEMBL
Match: tr|A0A0A0KX73|A0A0A0KX73_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287550 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 3.3e-84 Identity = 173/208 (83.17%), Postives = 174/208 (83.65%), Query Frame = 0
BLAST of CsGy4G013110 vs. TrEMBL
Match: tr|A0A0A0KZ89|A0A0A0KZ89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287020 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.7e-35 Identity = 91/156 (58.33%), Postives = 113/156 (72.44%), Query Frame = 0
BLAST of CsGy4G013110 vs. TrEMBL
Match: tr|A0A1S3BNU6|A0A1S3BNU6_CUCME (lipoxygenase 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491676 PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 3.0e-32 Identity = 76/92 (82.61%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of CsGy4G013110 vs. TrEMBL
Match: tr|A0A0A0L1V1|A0A0A0L1V1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G286990 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.3e-31 Identity = 72/88 (81.82%), Postives = 80/88 (90.91%), Query Frame = 0
BLAST of CsGy4G013110 vs. TrEMBL
Match: tr|A0A1S3BP51|A0A1S3BP51_CUCME (putative lipoxygenase 5 OS=Cucumis melo OX=3656 GN=LOC103491677 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 4.3e-31 Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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