CsGy4G013070 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G013070
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	putative lipoxygenase 5
Location	Chr4 : 18227319 .. 18232828 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTATGAGGTACCTATGATTTTATGGGATTCAAATTCACGATCCCAATTCTCGGGCATTGTGAAGACAGGATCGATGGACACTGGACTGTACACAGGATCAGACTACCTTATATGGTTTTCCCCCATGTTTAAAATATTGTATTCTTTTCCCCACTTTATTTTAATTGTCATAAAATAACGGAGACAATAGTTATTTTGGTTAAGAATGTATATAACTATGCATCATCGTATACACTATCTGATGAAAGAAAAGACAAATGATATTTGTTTAATAGAAAAACAATCCTCCATGAGCGTGTATAAATATGGGTTAAGGATATGCGTTGGAAATAAGGCAGTGGAAGCTAAGAGTTTGGGTTTTGTAATTTTCCAAATTTGGTTCTATTGTAAACTCTCCAAGGGCAGGAAAGGATGAGTTATATGGGTACTGTAGTTGTTACTGTGATACCGAAAAAGAACGAACAATTTCCTTGGGTCGAAATAATATATCTCAAGTTTGCTAGCGTCGAATTGGATTCGAGTAAGTCCTCATCTTCTCTCTTTAATTATTAATTTATATATGTTTTCCTACACTGCTAATGTAACCTATATATATTCTTCTGATGTAAACTGATTTAATAATATACATACGTACATACACAGATGAACAGCCAAAGGAATTTATCAAATGTGAGGCTCAATTACAAGAAGTTGATGAATCGGTGGAGTACAAGAAGTACAAAGGTGATATTAAGGTTGTCGAAGGTTTTGGGAAGATTGGAGCAGTGATTGTTGAACTGCAAGACGGTGTGAATGAGAGGTTTGTCGACACCATTTCTGTTGAGGCCGAAAAGCCTCCAATCTCGGTTACGTTTAGCTGCAAATCATTGGTGCAACCCAAGGGTCTTATTGACCACCGAAGGATCTTCTTTTCTTCCAACAAGGTGATTTATATAAATTGATTCAATATTATGGATCAAATATTTAAAATATTGATCTTCATGGAAATATAGAGTTATGACCATTTCATAAAATATTTTATTATGAAATATTTTAAAATACATGAAAAAAAAATGAAACGTAAAATATTTACAAAATACAACAAGATATGGTAGATTATGTCCATTATTTTCATATTGATTTTTTTTTTTTTTTTTGTGTTTAACATTTTTTCAACACTACAATAGAAATATCAAATTCATCTCCCGTCTCTATATCAAACCTAAGCAAATGTTGAAATATGAATGAAAATATTGACAAATGGATGAAAATTTAATACAATTTTGTAAGACTAATTAATAATTGAATATGGGGATGGATGCAGTCTTATTTGTCGGAAAAAACACCAGGAGGACTGGTGAAGCTAAGAGAAGAAGACCTTGCAAATCTGAGAGGCGAAAAAGCAGATGGATCAGTAGATAGAAATGAGCGTAAGGCGTTTGAAAGAATTTATGATTACGACCTGTACAACGACCTCGGAGATCCCGACCAGTCAATGAATATGAAAAGGCTTGTTCTTGGTGGTTCAGAGGAGTATCCTTATCCTCGACGTTGTAGAACTGGTCGTCCTCCTACTCAAAATGGTATCTTAATTTTCTAAATCCTTCCTTGTTAATTTAATATTCTACACTATACATATACATACATATATACATATATATACATACATATATACATATATATACATACATATATACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAATGGATGTGTTTGGCCGTACAATTGGGATTTAGATCCAGCATCAGAGAAAAGGATTGAAGAATGGTTTTATGTTCCGCGAGACGAAGAATTTTCAGAGATAAAGCAAAGTAGTAGTCAACCAGGAAACGAGAAATTGTTGCGAAAATCTCCTTTCTCTGACCTCCCTGAACTTGAGATTAAAACGCCTTCCGCTGCTTCCAAATTTAATCTTCAATTTAATATAGCATCCATACTTTCCTCTCATCGGCCACCTGCTCTTAAGTCATCAGATACGCCCAGTAGCACTCTCGTTGAACTTCCACCACCAGAGTCCTACAAGAGTGAGTATATATATATGTTTATGATAAGACACTTCAATTTCAAAGTGCATGCATGTGACAAACACTAACTAACTAATATGCAATAAAAACCTTTTTTGTTTGATTATTATACTTCAATTTCTCAGGAGACAAATATAATTGGTTGAGTGACATTGAATTTGCTAGACTCACACTTGCTGGTCTAAACACTTACTCTATACAGCTAGTCAAAGTATGTGACAATTAACTCACAATCAATTAATAATATATAACTCTATAAATATGAATTAATATCTCTAATTTAATTATTCTCCTGATAATAATTTATCAGAGTTTGCCGTTTATGAGTAAGCTTGACGAGGGAGATTATAGACCTCGAGAATCAAAATTCACTCCTGAATGAGTTCAAGAATTACTTGGATGTTATATCACAGTTGACAAGGTGAATTAAATTAGCTCAATGTAGTACTTTATTAAATTAGAAATTAAATGGAAAAAAAAAGTCGTTAAACTTTTAATTTTGAGTTTCTACAGGCATTAGCAGATAAAAGATTATTTGTAGTGGATTACCACGATACTTTAATGCCATATGTAAGCAAAGTAAGAAAAATAAAAGGGACGACACTATATGGATCAAGGACCTTGTTCTTTCTAAACTCTGATGGCACTTTGATGCCACTGGGTATTGAGCTGACTCGACCTCCAATGGATGGACATCTTGAACAATTGAAAGAAGTTTTCACACCAGGCACTAATTCAACAGATGTGTGGCTATGGAGGCTTGCGAAAGCCCATGTCCTTTCTCACGATTCTTGCATTCATCAACTTGTTATTCACTGGTATGTATGTCTCTATATCTACATACATACATACATGCATGCATGCAAGTATATATTTCTTATCAAATATAGTAAATGTTATGCAGGCTCAGAGCTCATTGTTGTATGGAGTCATATGCCATCGCTACAAATAGGCAATTAAGTACGATGCACCCAATCTATAGACTATTGCATCCTCATTTTCGGTATAACATGTGCATAAATGCCAATGCTCGTAACAACCTCATCAATGCCAGAGGCATCATTGAAAATGCATTTTCTGGTGCATCTTATTCAGTGGAACTTAGTTCTTCAGCGTACAAGGCGTGGAGATTTGATGAGCAAGCACTCCCTGAGGATTTAATTCACAGGTAATTAATTGAATTTAATTCACGCGACGTTAATAACGGAATGGAATTATTGACAATGTGTTTTGTAACTTAATTTAAAACATAGGGGAATGGCGGAAAGAAAAAGAGATTCAGAAGGTCGTGATGTTCTTGAGTTGACCATCAAGGACTACCCTTTTGCAAATGATGGTCTCCTATTATGGAATGCTCTGTTGGAATGGGTGACAGAATATGTGAACCACTATTATGGAGATGAAGAAAATGCAGTAACAAATGATAAAGAGCTGCAAGCTTGGTGGGGAGAAATTCAAGAGAAAGGGCATCCAGATAAAAGAGAAGGATGGCCTGCCTTAAGAACTCGAGACGATCTCATTAAGATTGCATCAACCATAGCATGGGTAGGAAGTGGGCACCACGCATCTGTCAATTTCCTTCAATATGCATATGGAGGCTATATGCCCAACCGACCCACTATTGCTAGGACCAACATGCTCACAGAGAACCACAGTGACGAAATTTTAAAAGACTTTAGAAATTATCCTGAAAACAAGTTAAATGAACTCTTTCCTTCAGTTGTTCAAGCTGCCATAGTCAAACAGACTATGTTTTTGTTGTCAATTCATTCTCCTGATGAGGAGTACATTGGGGACGCTATAGAGCCAGCCTGGGCTCTCGATCAGTCCATAAGTAAGGCCTTCGAAAAGTTTAAAGCCAAATTGACGGATCTAGAAAAGAAGATTGACGAGCTTAATGAGAACAAAGATTTGAAGAATAGGTATGGAGCTGGGATTATACCATACGAAGTTATGAAACCACGTTCAAAGCCTGGAGTCACTGGAATTGGAGTTCCATACAGCGTCTCCATTTAAACATAGCCTCTCCATATTAATTTTCTCTCTTCTCATTCCTACCAATGACATGGATCTTCCATTTTGTTTGTGTGTGCTCTTTCTTCCTGCAATTTTTCTTTTTCTCTAAAAATTAAGAACATAGGTCAGTCTATTTTAAGTGTGTTTTCGTTTTTAAGTACTAGTATGTGTGTCTCATTTACGTCCATTATGTCACTGTTGTTCCATGTTTTTAATTATAAAATAAATCAGGAAGCAAATGCACTCTTGGCTTCTTCTTCATATATTTCATTCATATCTTGACGTTATTATTTTAGTATGGTTCCTCCATTCATTTTACCGTTAGTTAGACTAACGAAAAACTGGCATAACAACTGGGTTATTCAAATTGGCAAATGGTTATAACCATAATTATGGAGATTTTATGATGTGAGCAAAAGCCTTTGTGGAAACGTGTGATTATTGCCAAATATGATCAAGCCTACATTGGTGATATCCCAACTAAAAAACCCATGGAGATCAATCACTAAAGGATTGGACTGTTGGTTCATTCCTCATGTTCAATGGAAGGTCAACAATGATGAATGTCTCTCTTTCTGGAAAGGTGCTTCCAATGAAAAGAGTCCCCTTTCTTTATACAGACCTAGACTTTATGTTCTTTCACAGAATCAAATAGATAGTGTTAAGGATACGTGGAATACAATTGACCTTGACCTCGACCTCCAACCTAGAAGATCAACTATGAGAAGCTTTGAGGTGCAGCAGTGGAATGAATTGAAAACATACCTCTCTTCTCCCCTTGAATACCAATGGCCTTTTTAGAATTGCTTCCATAAAAAAAAAAAAAAAAAAAAAAAGCCATTCTCACCATTGAACAAAGAGATTTTTCAAATATTGAGCCGACTATAATAAAAATGCAAATTCTTTGTTTGGTCTCTTATAAATGAATGTATAAATACTGTGACAAACTGTAAAAAAGATTGTCAAGTTGAAGCCTCAATCCTTGGTGCATTCGGTGTATAAAAGCATTTTTATTTTATTTTATTTTTTAAAAAAAGAAATTCATTTTACTTGTCACTATTTTCTCTCAAATTACTAATTAATTGAAACGATCTGAATGATAACTTTCATCCTAACCTTCAAGTTTGCATCCTCCAGCAGCAAAATCATAATATTTCCTTAATTTCATTTGTACACATACATTCACAATTAAACATACAAAGATTTATATTTAAAAAGAAAAATAAAAAGAAGAGATGAGGTAAAAGAAAAATAAAAGGAACTACTGTTTTTTCTCTTTTTTGGTGCAATGGGTTGTTATTTAAGTTTCAATTTAGATTCAAGAATTTGTGCTCTTTTTGTTTCTTACTTTATAGTGTTATTTAGTGTTGATTTCAAAGGAATATTTCCTTCTATATTTTAA

mRNA sequence

ATGACTTATGAGGAAAGGATGAGTTATATGGGTACTGTAGTTGTTACTGTGATACCGAAAAAGAACGAACAATTTCCTTGGGTCGAAATAATATATCTCAAGTTTGCTAGCGTCGAATTGGATTCGAATGAACAGCCAAAGGAATTTATCAAATGTGAGGCTCAATTACAAGAAGTTGATGAATCGGTGGAGTACAAGAAGTACAAAGGTGATATTAAGGTTGTCGAAGGTTTTGGGAAGATTGGAGCAGTGATTGTTGAACTGCAAGACGGTGTGAATGAGAGGTTTGTCGACACCATTTCTGTTGAGGCCGAAAAGCCTCCAATCTCGGTTACGTTTAGCTGCAAATCATTGGTGCAACCCAAGGATCCAGCATCAGAGAAAAGGATTGAAGAATGGTTTTATGTTCCGCGAGACGAAGAATTTTCAGAGATAAAGCAAAGTAGTAGTCAACCAGGAAACGAGAAATTGTTGCGAAAATCTCCTTTCTCTGACCTCCCTGAACTTGAGATTAAAACGCCTTCCGCTGCTTCCAAATTTAATCTTCAATTTAATATAGCATCCATACTTTCCTCTCATCGGCCACCTGCTCTTAAGTCATCAGATACGCCCAGTAGCACTCTCGTTGAACTTCCACCACCAGAGTCCTACAAGAAGTTTGCCGTTTATGAGAAGCAAATGCACTCTTGGCTTCTTCTTCATATATTTCATTCATATCTTGACGTTATTATTTTAGTATGGTTCCTCCATTCATTTTACCTGTTATTTAGTGTTGATTTCAAAGGAATATTTCCTTCTATATTTTAA

Coding sequence (CDS)

ATGACTTATGAGGAAAGGATGAGTTATATGGGTACTGTAGTTGTTACTGTGATACCGAAAAAGAACGAACAATTTCCTTGGGTCGAAATAATATATCTCAAGTTTGCTAGCGTCGAATTGGATTCGAATGAACAGCCAAAGGAATTTATCAAATGTGAGGCTCAATTACAAGAAGTTGATGAATCGGTGGAGTACAAGAAGTACAAAGGTGATATTAAGGTTGTCGAAGGTTTTGGGAAGATTGGAGCAGTGATTGTTGAACTGCAAGACGGTGTGAATGAGAGGTTTGTCGACACCATTTCTGTTGAGGCCGAAAAGCCTCCAATCTCGGTTACGTTTAGCTGCAAATCATTGGTGCAACCCAAGGATCCAGCATCAGAGAAAAGGATTGAAGAATGGTTTTATGTTCCGCGAGACGAAGAATTTTCAGAGATAAAGCAAAGTAGTAGTCAACCAGGAAACGAGAAATTGTTGCGAAAATCTCCTTTCTCTGACCTCCCTGAACTTGAGATTAAAACGCCTTCCGCTGCTTCCAAATTTAATCTTCAATTTAATATAGCATCCATACTTTCCTCTCATCGGCCACCTGCTCTTAAGTCATCAGATACGCCCAGTAGCACTCTCGTTGAACTTCCACCACCAGAGTCCTACAAGAAGTTTGCCGTTTATGAGAAGCAAATGCACTCTTGGCTTCTTCTTCATATATTTCATTCATATCTTGACGTTATTATTTTAGTATGGTTCCTCCATTCATTTTACCTGTTATTTAGTGTTGATTTCAAAGGAATATTTCCTTCTATATTTTAA

Protein sequence

MTYEERMSYMGTVVVTVIPKKNEQFPWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDESVEYKKYKGDIKVVEGFGKIGAVIVELQDGVNERFVDTISVEAEKPPISVTFSCKSLVQPKDPASEKRIEEWFYVPRDEEFSEIKQSSSQPGNEKLLRKSPFSDLPELEIKTPSAASKFNLQFNIASILSSHRPPALKSSDTPSSTLVELPPPESYKKFAVYEKQMHSWLLLHIFHSYLDVIILVWFLHSFYLLFSVDFKGIFPSIF

Homology

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BLAST of CsGy4G013070 vs. NCBI nr
Match: XP_011653578.1 (PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 3.0e-98
Identity = 210/313 (67.09%), Postives = 211/313 (67.41%), Query Frame = 0


Query: 7   MSYMGTVVVTVIPKKNEQFPWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDESVEYK 66
           MSYMGTVVVTVIPKKNEQFPWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDESVEYK
Sbjct: 1   MSYMGTVVVTVIPKKNEQFPWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDESVEYK 60

Query: 67  KYKGDIKVVEGFGKIGAVIVELQDGVNERFVDTISVEAEKPPISVTFSCKSLVQPK---- 126
           KYKGDIKV EGFGKIGAVIVELQDGVNERFVDTISVEAEKPPISVTFSCKS VQPK    
Sbjct: 61  KYKGDIKVAEGFGKIGAVIVELQDGVNERFVDTISVEAEKPPISVTFSCKSWVQPKGLID 120

Query: 127 ------------------------------------------------------------ 186
                                                                       
Sbjct: 121 HRRIFFSSNKSYLSGKTPGGLVKLREEDLANLRGEKADGSVDRNERKAFERIYDYDLYND 180

Query: 187 ------------------------------------DPASEKRIEEWFYVPRDEEFSEIK 220
                                               DPASEKRIEEWFYVPRDEEFSEIK
Sbjct: 181 LGDPDQSMNLKRPVLGGSEEYPYPRRCRTGRPLTQNDPASEKRIEEWFYVPRDEEFSEIK 240

[Close]

BLAST of CsGy4G013070 vs. NCBI nr
Match: KGN54133.1 (hypothetical protein Csa_4G287550 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 8.5e-85
Identity = 173/208 (83.17%), Postives = 176/208 (84.62%), Query Frame = 0


Query: 42  SNEQPKEFIKCEAQLQEVDESVEYKKYKGDIKVVEGFGKIGAVIVELQDGVNERFVDTIS 101
           ++EQPKEFIKCEAQLQEVDESVEYKKYKGDIKV EGFGKIGAVIVELQDGVNERFVDTIS
Sbjct: 20  ADEQPKEFIKCEAQLQEVDESVEYKKYKGDIKVAEGFGKIGAVIVELQDGVNERFVDTIS 79

Query: 102 VEAEKPPISVTFSCKSLVQPK------------------------------DPASEKRIE 161
           VEAEKPPISVTFSCKS VQPK                              DPASEKRIE
Sbjct: 80  VEAEKPPISVTFSCKSWVQPKGLIDHRRIFFSSNKCRIYINGCVWPYNWDLDPASEKRIE 139

Query: 162 EWFYVPRDEEFSEIKQSSSQPGNEKLLRKSPFSDLPELEIKTPSAASKFNLQFNIASILS 220
           EWFYVPRDEEFSEIKQSSSQPGNEKLLRKSPFSDLPELEIKTPSAASKFNLQFNIASILS
Sbjct: 140 EWFYVPRDEEFSEIKQSSSQPGNEKLLRKSPFSDLPELEIKTPSAASKFNLQFNIASILS 199

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BLAST of CsGy4G013070 vs. NCBI nr
Match: XP_004142238.2 (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 1.2e-78
Identity = 177/327 (54.13%), Postives = 200/327 (61.16%), Query Frame = 0


Query: 7   MSYMGTVVVTVIPKKNEQFPWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDESVEYK 66
           MSY GTVVVT+ PKK+EQF WVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDE VEYK
Sbjct: 1   MSYTGTVVVTMKPKKDEQFRWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDELVEYK 60

Query: 67  KYKGDIKVVEGFGKIGAVIVELQDGVNERFVDTISVEAEKPPISVTFSCKSLVQPK---- 126
           KY G+I V EGFG+IGAVIVELQ+GVNERF+DTISVEAE+PPIS+TFSCKS VQPK    
Sbjct: 61  KYIGEIVVAEGFGEIGAVIVELQEGVNERFIDTISVEAEEPPISITFSCKSWVQPKGLID 120

Query: 127 ------------------------------------------------------------ 186
                                                                       
Sbjct: 121 HRRIFFSSNKSYLLGKTPRGLVKLREEDLANLRGEKEDGSVDRNERKAFERIYDYDLYND 180

Query: 187 ------------------------------------DPASEKRIEEWFYVPRDEEFSEIK 232
                                               DPASEKR+EEWFY+PRDEEFSEIK
Sbjct: 181 LGDPDLSMDLKRPVLGGSEEYPYPRRCRTGRPPTQNDPASEKRVEEWFYIPRDEEFSEIK 240

[Close]

BLAST of CsGy4G013070 vs. NCBI nr
Match: XP_008449948.1 (PREDICTED: putative lipoxygenase 5, partial [Cucumis melo])

HSP 1 Score: 207.6 bits (527), Expect = 5.2e-50
Identity = 105/124 (84.68%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 7   MSYMGTVVVTVIPKKNEQFPWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDESVEYK 66
           MSYMG VVVTV PKK E+FPWVEIIYLKFASVELDSN QPKEFIKCEAQLQEVDESVEYK
Sbjct: 1   MSYMGNVVVTVKPKKKEEFPWVEIIYLKFASVELDSNGQPKEFIKCEAQLQEVDESVEYK 60

Query: 67  KYKGDIKVVEGFGKIGAVIVELQDGVNERFVDTISVEAEKPPISVTFSCKSLVQPKDPAS 126
           KYKG+IKV EGFG+IGAVIVELQ+GVNERF+DTISV AE+PPISVTFSCKS VQPK   +
Sbjct: 61  KYKGEIKVAEGFGEIGAVIVELQEGVNERFIDTISVVAEEPPISVTFSCKSWVQPKGLIA 120

Query: 127 EKRI 131
            +RI
Sbjct: 121 HRRI 124

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BLAST of CsGy4G013070 vs. NCBI nr
Match: KGN54126.1 (hypothetical protein Csa_4G286990 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 6.4e-48
Identity = 102/124 (82.26%), Postives = 111/124 (89.52%), Query Frame = 0


Query: 7   MSYMGTVVVTVIPKKNEQFPWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDESVEYK 66
           MSY GTVVVT+ PKK+EQF WVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDE VEYK
Sbjct: 1   MSYTGTVVVTMKPKKDEQFRWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDELVEYK 60

Query: 67  KYKGDIKVVEGFGKIGAVIVELQDGVNERFVDTISVEAEKPPISVTFSCKSLVQPKDPAS 126
           KY G+I V EGFG+IGAVIVELQ+GVNERF+DTISVEAE+PPIS+TFSCKS VQPK    
Sbjct: 61  KYIGEIVVAEGFGEIGAVIVELQEGVNERFIDTISVEAEEPPISITFSCKSWVQPKGLID 120

Query: 127 EKRI 131
            +RI
Sbjct: 121 HRRI 124

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BLAST of CsGy4G013070 vs. TrEMBL
Match: tr|A0A0A0KX73|A0A0A0KX73_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287550 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 5.7e-85
Identity = 173/208 (83.17%), Postives = 176/208 (84.62%), Query Frame = 0


Query: 42  SNEQPKEFIKCEAQLQEVDESVEYKKYKGDIKVVEGFGKIGAVIVELQDGVNERFVDTIS 101
           ++EQPKEFIKCEAQLQEVDESVEYKKYKGDIKV EGFGKIGAVIVELQDGVNERFVDTIS
Sbjct: 20  ADEQPKEFIKCEAQLQEVDESVEYKKYKGDIKVAEGFGKIGAVIVELQDGVNERFVDTIS 79

Query: 102 VEAEKPPISVTFSCKSLVQPK------------------------------DPASEKRIE 161
           VEAEKPPISVTFSCKS VQPK                              DPASEKRIE
Sbjct: 80  VEAEKPPISVTFSCKSWVQPKGLIDHRRIFFSSNKCRIYINGCVWPYNWDLDPASEKRIE 139

Query: 162 EWFYVPRDEEFSEIKQSSSQPGNEKLLRKSPFSDLPELEIKTPSAASKFNLQFNIASILS 220
           EWFYVPRDEEFSEIKQSSSQPGNEKLLRKSPFSDLPELEIKTPSAASKFNLQFNIASILS
Sbjct: 140 EWFYVPRDEEFSEIKQSSSQPGNEKLLRKSPFSDLPELEIKTPSAASKFNLQFNIASILS 199

[Close]

BLAST of CsGy4G013070 vs. TrEMBL
Match: tr|A0A1S3BP51|A0A1S3BP51_CUCME (putative lipoxygenase 5 OS=Cucumis melo OX=3656 GN=LOC103491677 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.5e-50
Identity = 105/124 (84.68%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 7   MSYMGTVVVTVIPKKNEQFPWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDESVEYK 66
           MSYMG VVVTV PKK E+FPWVEIIYLKFASVELDSN QPKEFIKCEAQLQEVDESVEYK
Sbjct: 1   MSYMGNVVVTVKPKKKEEFPWVEIIYLKFASVELDSNGQPKEFIKCEAQLQEVDESVEYK 60

Query: 67  KYKGDIKVVEGFGKIGAVIVELQDGVNERFVDTISVEAEKPPISVTFSCKSLVQPKDPAS 126
           KYKG+IKV EGFG+IGAVIVELQ+GVNERF+DTISV AE+PPISVTFSCKS VQPK   +
Sbjct: 61  KYKGEIKVAEGFGEIGAVIVELQEGVNERFIDTISVVAEEPPISVTFSCKSWVQPKGLIA 120

Query: 127 EKRI 131
            +RI
Sbjct: 121 HRRI 124

[Close]

BLAST of CsGy4G013070 vs. TrEMBL
Match: tr|A0A0A0L1V1|A0A0A0L1V1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G286990 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.2e-48
Identity = 102/124 (82.26%), Postives = 111/124 (89.52%), Query Frame = 0


Query: 7   MSYMGTVVVTVIPKKNEQFPWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDESVEYK 66
           MSY GTVVVT+ PKK+EQF WVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDE VEYK
Sbjct: 1   MSYTGTVVVTMKPKKDEQFRWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDELVEYK 60

Query: 67  KYKGDIKVVEGFGKIGAVIVELQDGVNERFVDTISVEAEKPPISVTFSCKSLVQPKDPAS 126
           KY G+I V EGFG+IGAVIVELQ+GVNERF+DTISVEAE+PPIS+TFSCKS VQPK    
Sbjct: 61  KYIGEIVVAEGFGEIGAVIVELQEGVNERFIDTISVEAEEPPISITFSCKSWVQPKGLID 120

Query: 127 EKRI 131
            +RI
Sbjct: 121 HRRI 124

[Close]

BLAST of CsGy4G013070 vs. TrEMBL
Match: tr|A0A0A0KZ89|A0A0A0KZ89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287020 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.2e-48
Identity = 122/214 (57.01%), Postives = 151/214 (70.56%), Query Frame = 0


Query: 7   MSYMGTVVVTVIPKKNEQFPWVEIIYLKFASVELDSNEQPKEFIKCEAQLQEVDESVEYK 66
           MSY GTV VTV PKKNE F  +E+IYL+F SVELDS    ++ I C A L+   +    K
Sbjct: 1   MSYKGTVTVTVNPKKNEAFLTIEVIYLEFVSVELDSKGN-QQIIGCTAGLKCGGD--VSK 60

Query: 67  KYKGDIKVVEGFGKIGAVIVELQDGVNERFVDTISVEAEKPPISVTFSCKSLVQPKDPAS 126
            ++  I V   FG+IGAVIVEL D V ERF+DTI+++ +K  + +TFSCKS VQPK+  +
Sbjct: 61  LFETSIDVPGDFGEIGAVIVELDDDVKERFIDTITIDFKKCTL-LTFSCKSWVQPKNKHA 120

Query: 127 EKRIEEWFYVPRDEEFSEIKQSSSQPGNEKLLRKSPFSDLPELEIKTPSAASKFN-LQFN 186
           E+RIE  FYVPRDE FSE KQ S    NE LL K+PFSDLPEL+IKTP AASK N L F+
Sbjct: 121 EERIEAPFYVPRDENFSEEKQGSVLAENEALLGKAPFSDLPELDIKTPFAASKINQLPFD 180

Query: 187 IASILSSHRPPALKSSDTPSSTLVELPPPESYKK 220
           I S++SS++PP L S D   S+ VELP PESYK+
Sbjct: 181 IPSLVSSNQPPPLNSLDDEPSSSVELPLPESYKR 210

[Close]

BLAST of CsGy4G013070 vs. TrEMBL
Match: tr|A0A0A0L1V5|A0A0A0L1V5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287530 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.3e-38
Identity = 112/239 (46.86%), Postives = 152/239 (63.60%), Query Frame = 0


Query: 15  VTVIPK-KNEQFPWVEIIYLKFASVELDSNEQPKEFIKCEAQ-LQEVDESVEYKKYKGDI 74
           VTV PK K   +P+  II LKFAS+ELDS++Q K FIKC  + +   DE+ EYKKY G++
Sbjct: 9   VTVKPKTKGPTYPYANII-LKFASIELDSDQQQKPFIKCVVEPILPDDETEEYKKYVGEV 68

Query: 75  KVVEGFGKIGAVIVELQDGVN--ERFVDTISVEAEKPPISVTFSCKSLVQPKDP------ 134
           +V EG+G+IGAVIVEL+      E+F+DTIS+  +K   S TFSCKS VQ K        
Sbjct: 69  EVPEGYGEIGAVIVELEGDTTKYEKFIDTISITDKKSRNSTTFSCKSWVQSKSVLDQRRV 128

Query: 135 --ASEKRIEEWFYVPRDEEFSEIKQ---SSSQPGNEKLLRKSPFSDLPELE------IKT 194
             +++KR +E FYVPRDEEFSE+KQ    SS+P N+ LL K  FSDLP +E      IK 
Sbjct: 129 FFSTKKRSKERFYVPRDEEFSEVKQHYFPSSEPDNKDLLGKDSFSDLPHIESMFREGIKA 188

Query: 195 PSAASKFNLQFNIASILSSHRPPALKSSDTP-SSTLVELPPPESYKKFAVYEKQMHSWL 232
           P A  K  L FN+++I++  +P    +S++   S+L+  PPPESY+      +  +SWL
Sbjct: 189 PHAPHKL-LTFNLSTIVTPDKPDLHSNSNSSVPSSLLHYPPPESYR------RDRYSWL 239

The following BLAST results are available for this feature:

BLAST of CsGy4G013070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653578.1	3.0e-98	67.09	PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sati...	[more]
KGN54133.1	8.5e-85	83.17	hypothetical protein Csa_4G287550 [Cucumis sativus]	[more]
XP_004142238.2	1.2e-78	54.13	PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus]	[more]
XP_008449948.1	5.2e-50	84.68	PREDICTED: putative lipoxygenase 5, partial [Cucumis melo]	[more]
KGN54126.1	6.4e-48	82.26	hypothetical protein Csa_4G286990 [Cucumis sativus]	[more]

BLAST of CsGy4G013070 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy4G013070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy4G013070 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KX73\|A0A0A0KX73_CUCSA	5.7e-85	83.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287550 PE=4 SV=1	[more]
tr\|A0A1S3BP51\|A0A1S3BP51_CUCME	3.5e-50	84.68	putative lipoxygenase 5 OS=Cucumis melo OX=3656 GN=LOC103491677 PE=4 SV=1	[more]
tr\|A0A0A0L1V1\|A0A0A0L1V1_CUCSA	4.2e-48	82.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G286990 PE=4 SV=1	[more]
tr\|A0A0A0KZ89\|A0A0A0KZ89_CUCSA	4.2e-48	57.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287020 PE=4 SV=1	[more]
tr\|A0A0A0L1V5\|A0A0A0L1V5_CUCSA	2.3e-38	46.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287530 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0046872	metal ion binding
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR036392	PLAT/LH2_dom_sf
IPR000907	LipOase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0016020	membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G013070.1	CsGy4G013070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.60.60.20		coord: 13..139 e-value: 2.5E-9 score: 39.0
None	No IPR available	PANTHER	PTHR11771:SF65	SUBFAMILY NOT NAMED	coord: 31..130
IPR000907	Lipoxygenase	PANTHER	PTHR11771	LIPOXYGENASE	coord: 31..130
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	SSF49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 31..130

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G013070	Lsi10G010230	Bottle gourd (USVL1VR-Ls)	cgyblsiB232
CsGy4G013070	Lsi10G010150	Bottle gourd (USVL1VR-Ls)	cgyblsiB234

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G013070	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G013070	Watermelon (97103) v2	cgybwmbB273
CsGy4G013070	Wax gourd	cgybwgoB373
CsGy4G013070	Cucurbita maxima (Rimu)	cgybcmaB525
CsGy4G013070	Cucurbita maxima (Rimu)	cgybcmaB522
CsGy4G013070	Cucurbita moschata (Rifu)	cgybcmoB493
CsGy4G013070	Cucurbita moschata (Rifu)	cgybcmoB496
CsGy4G013070	Cucurbita pepo (Zucchini)	cgybcpeB496
CsGy4G013070	Cucurbita pepo (Zucchini)	cgybcpeB561
CsGy4G013070	Cucumber (Chinese Long) v2	cgybcuB167
CsGy4G013070	Melon (DHL92) v3.5.1	cgybmeB249
CsGy4G013070	Melon (DHL92) v3.6.1	cgybmedB247
CsGy4G013070	Watermelon (Charleston Gray)	cgybwcgB272
CsGy4G013070	Watermelon (97103) v1	cgybwmB323
CsGy4G013070	Watermelon (97103) v1	cgybwmB325
CsGy4G013070	Wild cucumber (PI 183967)	cgybcpiB170
CsGy4G013070	Silver-seed gourd	carcgybB0529
CsGy4G013070	Silver-seed gourd	carcgybB0909