CsGy4G013050 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G013050
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Lipoxygenase
Location	Chr4 : 18186184 .. 18187802 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTTGAGGTTATTGCTTCTGTTACTGTGAAACCCAAAACGAAGGGACCTACTTATCCTTACGCAAACATCATTCTCAAGTTTGCTAGCATTGAATTGGATTCGGGTATGTCATTCTTTATGTTTGTTAGATCATATAATATTAAATTTATATTAGTAAAGTGTTGTATATGTTTTAAGTAAGGTTATAAGGTTTTGGGTGAATTGATGATTGAATAATAATAATGATATGTAAATGGATTTGATGTACACATAGATCAACAACAAAAGCCATTTATCAAATGTGTGGTGGAACCAATACTGCCTGATGATGAAACTGAGGAGTACAAGAAGTACGTAGGTGAAGTTGAGGTTCCAGAAGGTTATGGGGAGATTGGAGCAGTGATTGTTGAATTGGAAGGTGATACGACCAAGTATGAAAAATTTATTGACACTATTTCTATTACGGACAAAAAGTCTAGGAACTCAACTACGTTCAGTTGCAAATCATGGGTGCAATCCAAATCGGTTCTTGACCAGCGAAGGGTCTTCTTTTCCACCAAGGTTCATATATATAATTAAAATCTTCTTTCACTCATGAGCTTAACTTTTTACGTCTAGAATACCATGTGTTTAAACTCTCCATCAAACTTTTGGATCAATTTGTGATTTAAGAATAATTAAGTTATTTAAATTTATTCTGATGAGTTAATAGTGGAAATGGTTGACAGTCGTATTTACCGGAAAAAACACCAGGCGGATTGTTGAAGCTGAGAGCAGAAGACCTTTCGAATCTAAGAGGCATAAAAGCAGATGAAACAGTGGATATGAATGAGCGTAAGGCATTCGAAAGAATTTATGATTACGACTTCTACAATGACCTTGGAGATTGTGATGGTCCCGCAGAATGGAAAAGGCCTGTTCTTGGTGGTTCCGATCACCCTTATCCTCGTCGTTGTAGAACGGGTCGTCTTCATTGTAAAACAGGTATCTTCTGTTTATGTTTTTTCTGTATTTAAAATTTCTTTCTAAAATTTTTGTTCATTAAAAACAAAGGAAAATATGATAATAATATGGTTGCATTTTGTGAAATGGTAACTATTAGATCCGGTCTCAGAGAAAAGGAGTAAAGAAAGGTTTTATGTTCCAAGAGATGAAGAATTCTCAGAGGTGAAGCAACATTATTTCCCTTCAAGTGAACCAGATAACAAGGATTTATTGGGAAAAGATTCTTTCTCTGACCTCCCTCATATTGAGTCAATGTTTAGAGAAGGAATTAAAGCCCCTCATGCTCCTCACAAACTTCTCACGTTTAATTTATCAACCATAGTTACCCCAGACAAACCTGACCTTCATTCCAATTCCAATTCATCTGTGCCCAGTTCTCTCCTTCATTATCCACCACCAGAGTCCTATAGGAGTAAGTAATTATATATATATTTTTTCTTTTTATGTTAATTGGAACTTTTTAAAGTGTGCCAATTGTAGCATTTGCCTTACTAATCCTTATAAATGTTTGGTTATTTTTCTCAGGAGATAGGTACAGTTGGCTCAGTGATACCGAATTTGCAAGACAGACACTGGCTGGTCTCAATCCTTACTCCATACAGCTTGTCACAGTAAGTGGCGATCGATAA

mRNA sequence

ATGGGTGTTGAGGTTATTGCTTCTGTTACTGTGAAACCCAAAACGAAGGGACCTACTTATCCTTACGCAAACATCATTCTCAAGTTTGCTAGCATTGAATTGGATTCGGGAGATAGGTACAGTTGGCTCAGTGATACCGAATTTGCAAGACAGACACTGGCTGGTCTCAATCCTTACTCCATACAGCTTGTCACAGTAAGTGGCGATCGATAA

Coding sequence (CDS)

ATGGGTGTTGAGGTTATTGCTTCTGTTACTGTGAAACCCAAAACGAAGGGACCTACTTATCCTTACGCAAACATCATTCTCAAGTTTGCTAGCATTGAATTGGATTCGGGAGATAGGTACAGTTGGCTCAGTGATACCGAATTTGCAAGACAGACACTGGCTGGTCTCAATCCTTACTCCATACAGCTTGTCACAGTAAGTGGCGATCGATAA

Protein sequence

MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLVTVSGDR

Homology

[Close]

BLAST of CsGy4G013050 vs. NCBI nr
Match: XP_004142237.1 (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 2.4e-10
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1  MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDS 37
          MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDS
Sbjct: 1  MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDS 36

HSP 2 Score: 61.6 bits (148), Expect = 1.2e-06
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 38  DRYSWLSDTEFARQTLAGLNPYSIQLVT 66
           DRYSWLSDTEFARQTLAGLNPYSIQLVT
Sbjct: 324 DRYSWLSDTEFARQTLAGLNPYSIQLVT 351

[Close]

BLAST of CsGy4G013050 vs. NCBI nr
Match: KGN54131.1 (hypothetical protein Csa_4G287530 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 2.4e-10
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1  MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDS 37
          MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDS
Sbjct: 1  MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDS 36

HSP 2 Score: 61.6 bits (148), Expect = 1.2e-06
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 38  DRYSWLSDTEFARQTLAGLNPYSIQLVT 66
           DRYSWLSDTEFARQTLAGLNPYSIQLVT
Sbjct: 234 DRYSWLSDTEFARQTLAGLNPYSIQLVT 261

[Close]

BLAST of CsGy4G013050 vs. NCBI nr
Match: XP_008449754.1 (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 66.6 bits (161), Expect = 3.8e-08
Identity = 32/36 (88.89%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 1  MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDS 37
          MGVE   SVTVKPKT GPTYPYANIILKFASIELDS
Sbjct: 1  MGVEATVSVTVKPKTTGPTYPYANIILKFASIELDS 36

HSP 2 Score: 62.4 bits (150), Expect = 7.1e-07
Identity = 34/61 (55.74%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 8   SVTVKPKTKGPTYPYANI---ILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLV 66
           S  V P  K   +  +++   +L +   E    DRYSWLSDTEFARQTLAGLNPYSIQLV
Sbjct: 290 STIVTPDHKPDLHSNSSVPSSLLHYPPPESYRRDRYSWLSDTEFARQTLAGLNPYSIQLV 349

[Close]

BLAST of CsGy4G013050 vs. NCBI nr
Match: PIA53433.1 (hypothetical protein AQUCO_00900190v1 [Aquilegia coerulea])

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-06
Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 13  PKTKGPTYPYANIILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLVT 66
           P+  G      + +L F + E+ + DR+SWL+D EF+RQTLAGLNPYSIQLVT
Sbjct: 369 PRLVGSLSQIKDDLLLFDTPEIFNRDRFSWLNDEEFSRQTLAGLNPYSIQLVT 421

[Close]

BLAST of CsGy4G013050 vs. NCBI nr
Match: CDY70606.1 (BnaAnng34320D [Brassica napus])

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-06
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 23  ANIILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLVTVS 68
           A+ IL+F S  L   DR+SW+ D EFARQTLAGLNPY IQLV VS
Sbjct: 346 ADDILQFESPSLLDKDRFSWIRDDEFARQTLAGLNPYCIQLVQVS 390

[Close]

BLAST of CsGy4G013050 vs. TAIR10
Match: AT3G45140.1 (lipoxygenase 2)

HSP 1 Score: 57.8 bits (138), Expect = 3.2e-09
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0


Query: 26  ILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLV 65
           IL+F +  L + DR+SWL D EFARQTLAGLNPYSIQLV
Sbjct: 378 ILQFDAPVLINRDRFSWLRDDEFARQTLAGLNPYSIQLV 416

[Close]

BLAST of CsGy4G013050 vs. TAIR10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 47.8 bits (112), Expect = 3.3e-06
Identity = 19/40 (47.50%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 26  ILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLVT 66
           +L++ + ++ S D+Y+WL D EFARQ +AG+NP +I+ VT
Sbjct: 408 LLRYDTPKIVSKDKYAWLRDDEFARQAIAGINPVNIERVT 447

[Close]

BLAST of CsGy4G013050 vs. TAIR10
Match: AT1G17420.1 (lipoxygenase 3)

HSP 1 Score: 44.3 bits (103), Expect = 3.6e-05
Identity = 22/55 (40.00%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 10  TVKPKTKGPTYPYANIILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLV 65
           T++  TKG        +LK+ + ++ S D+ +WL D EFARQ +AG+NP +I+ V
Sbjct: 395 TLQESTKG--------LLKYDTPKILSKDKNAWLRDDEFARQAIAGINPVNIERV 441

[Close]

BLAST of CsGy4G013050 vs. TAIR10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 44.3 bits (103), Expect = 3.6e-05
Identity = 18/39 (46.15%), Postives = 28/39 (71.79%), Query Frame = 0


Query: 26  ILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLV 65
           +LK+ +  +   DR++WL D EF RQ LAG+NP +I+L+
Sbjct: 397 LLKYDTPAVIKWDRFAWLRDNEFGRQALAGVNPVNIELL 435

[Close]

BLAST of CsGy4G013050 vs. TAIR10
Match: AT1G55020.1 (lipoxygenase 1)

HSP 1 Score: 41.2 bits (95), Expect = 3.1e-04
Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 0


Query: 27  LKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLV 65
           LKF   ++   D+ +W +D EFAR+ LAGLNP  IQL+
Sbjct: 345 LKFPVPQVIKEDKTAWRTDEEFAREMLAGLNPVVIQLL 382

[Close]

BLAST of CsGy4G013050 vs. Swiss-Prot
Match: sp|P38418|LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 5.7e-08
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0


Query: 26  ILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLV 65
           IL+F +  L + DR+SWL D EFARQTLAGLNPYSIQLV
Sbjct: 378 ILQFDAPVLINRDRFSWLRDDEFARQTLAGLNPYSIQLV 416

[Close]

BLAST of CsGy4G013050 vs. Swiss-Prot
Match: sp|O24370|LOX21_SOLTU (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 9.8e-08
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 26  ILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLVT 66
           +L F S +L   D++SW  D EFARQTLAGLNPYSI+LVT
Sbjct: 380 VLLFESPQLVQRDKFSWFRDVEFARQTLAGLNPYSIRLVT 419

[Close]

BLAST of CsGy4G013050 vs. Swiss-Prot
Match: sp|P93184|LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.1e-06
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 0


Query: 26  ILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLVT 66
           + KF + E+   D+++W  D EFARQT+AG+NP SIQLVT
Sbjct: 409 VFKFETPEIHDRDKFAWFRDEEFARQTIAGMNPMSIQLVT 448

[Close]

BLAST of CsGy4G013050 vs. Swiss-Prot
Match: sp|Q8GSM3|LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.4e-06
Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 0


Query: 26  ILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLVT 66
           + KF + E+   D+ +W  D EFARQTLAG+NP SIQLVT
Sbjct: 408 VFKFETPEIHDMDKLAWFRDEEFARQTLAGMNPLSIQLVT 447

[Close]

BLAST of CsGy4G013050 vs. Swiss-Prot
Match: sp|P38419|LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 1.2e-05
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 23  ANIILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLV 65
           A  IL+F +      D+++WL D EFAR+TLAG+NPY+I+LV
Sbjct: 402 AEKILRFETPANIQKDKFAWLRDEEFARETLAGINPYAIELV 443

[Close]

BLAST of CsGy4G013050 vs. TrEMBL
Match: tr|A0A0A0L1V5|A0A0A0L1V5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287530 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-10
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1  MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDS 37
          MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDS
Sbjct: 1  MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDS 36

HSP 2 Score: 61.6 bits (148), Expect = 8.0e-07
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 38  DRYSWLSDTEFARQTLAGLNPYSIQLVT 66
           DRYSWLSDTEFARQTLAGLNPYSIQLVT
Sbjct: 234 DRYSWLSDTEFARQTLAGLNPYSIQLVT 261

[Close]

BLAST of CsGy4G013050 vs. TrEMBL
Match: tr|A0A1S3BNQ1|A0A1S3BNQ1_CUCME (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491544 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.5e-08
Identity = 32/36 (88.89%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 1  MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDS 37
          MGVE   SVTVKPKT GPTYPYANIILKFASIELDS
Sbjct: 1  MGVEATVSVTVKPKTTGPTYPYANIILKFASIELDS 36

HSP 2 Score: 62.4 bits (150), Expect = 4.7e-07
Identity = 34/61 (55.74%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 8   SVTVKPKTKGPTYPYANI---ILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLV 66
           S  V P  K   +  +++   +L +   E    DRYSWLSDTEFARQTLAGLNPYSIQLV
Sbjct: 290 STIVTPDHKPDLHSNSSVPSSLLHYPPPESYRRDRYSWLSDTEFARQTLAGLNPYSIQLV 349

[Close]

BLAST of CsGy4G013050 vs. TrEMBL
Match: tr|A0A2G5ECE4|A0A2G5ECE4_AQUCA (Lipoxygenase OS=Aquilegia coerulea OX=218851 GN=AQUCO_00900190v1 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-06
Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 13  PKTKGPTYPYANIILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLVT 66
           P+  G      + +L F + E+ + DR+SWL+D EF+RQTLAGLNPYSIQLVT
Sbjct: 369 PRLVGSLSQIKDDLLLFDTPEIFNRDRFSWLNDEEFSRQTLAGLNPYSIQLVT 421

[Close]

BLAST of CsGy4G013050 vs. TrEMBL
Match: tr|A0A078JYK8|A0A078JYK8_BRANA (BnaAnng34320D protein OS=Brassica napus OX=3708 GN=BnaAnng34320D PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-06
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 23  ANIILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYSIQLVTVS 68
           A+ IL+F S  L   DR+SW+ D EFARQTLAGLNPY IQLV VS
Sbjct: 346 ADDILQFESPSLLDKDRFSWIRDDEFARQTLAGLNPYCIQLVQVS 390

[Close]

BLAST of CsGy4G013050 vs. TrEMBL
Match: tr|F6GUC9|F6GUC9_VITVI (Lipoxygenase OS=Vitis vinifera OX=29760 GN=VIT_06s0004g01460 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-06
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 1   MGVEVIASVTVKPKTKGPTYPYANIILKFASIELDSGDRYSWLSDTEFARQTLAGLNPYS 60
           + VE  A VT+    K P     +++L+  S ELD  D++SWL D EF+RQTLAG+NP S
Sbjct: 69  ISVEATAGVTL----KSPNLLGGSLLLELVSAELDPQDKFSWLWDEEFSRQTLAGVNPCS 128

Query: 61  IQLVT 66
           I+LV+
Sbjct: 129 IKLVS 129

The following BLAST results are available for this feature:

BLAST of CsGy4G013050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142237.1	2.4e-10	100.00	PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus]	[more]
KGN54131.1	2.4e-10	100.00	hypothetical protein Csa_4G287530 [Cucumis sativus]	[more]
XP_008449754.1	3.8e-08	88.89	PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis melo]	[more]
PIA53433.1	2.1e-06	54.72	hypothetical protein AQUCO_00900190v1 [Aquilegia coerulea]	[more]
CDY70606.1	2.7e-06	66.67	BnaAnng34320D [Brassica napus]	[more]

BLAST of CsGy4G013050 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45140.1	3.2e-09	71.79	lipoxygenase 2	[more]
AT1G72520.1	3.3e-06	47.50	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G17420.1	3.6e-05	40.00	lipoxygenase 3	[more]
AT1G67560.1	3.6e-05	46.15	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G55020.1	3.1e-04	50.00	lipoxygenase 1	[more]

BLAST of CsGy4G013050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P38418\|LOX2_ARATH	5.7e-08	71.79	Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1	[more]
sp\|O24370\|LOX21_SOLTU	9.8e-08	65.00	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LO...	[more]
sp\|P93184\|LOX21_HORVU	1.1e-06	55.00	Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.1 PE=1 SV=1	[more]
sp\|Q8GSM3\|LOX22_HORVU	2.4e-06	57.50	Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.2 PE=1 SV=1	[more]
sp\|P38419\|LOXC1_ORYSJ	1.2e-05	52.38	Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX...	[more]

BLAST of CsGy4G013050 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L1V5\|A0A0A0L1V5_CUCSA	1.6e-10	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287530 PE=4 SV=1	[more]
tr\|A0A1S3BNQ1\|A0A1S3BNQ1_CUCME	2.5e-08	88.89	Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491544 PE=3 SV=1	[more]
tr\|A0A2G5ECE4\|A0A2G5ECE4_AQUCA	1.4e-06	54.72	Lipoxygenase OS=Aquilegia coerulea OX=218851 GN=AQUCO_00900190v1 PE=3 SV=1	[more]
tr\|A0A078JYK8\|A0A078JYK8_BRANA	1.8e-06	66.67	BnaAnng34320D protein OS=Brassica napus OX=3708 GN=BnaAnng34320D PE=4 SV=1	[more]
tr\|F6GUC9\|F6GUC9_VITVI	2.3e-06	47.69	Lipoxygenase OS=Vitis vinifera OX=29760 GN=VIT_06s0004g01460 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872	metal ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR036226	LipOase_C_sf
IPR000907	LipOase
IPR027433	Lipoxygenase_dom_3
IPR013819	LipOase_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0031408	oxylipin biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G013050.1	CsGy4G013050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013819	Lipoxygenase, C-terminal	PFAM	PF00305	Lipoxygenase	coord: 24..65 e-value: 8.6E-9 score: 34.3
IPR013819	Lipoxygenase, C-terminal	PROSITE	PS51393	LIPOXYGENASE_3	coord: 1..70 score: 11.972
IPR027433	Lipoxygenase, domain 3	GENE3D	G3DSA:4.10.372.10		coord: 3..58 e-value: 6.2E-8 score: 34.9
IPR000907	Lipoxygenase	PANTHER	PTHR11771	LIPOXYGENASE	coord: 23..65
None	No IPR available	PANTHER	PTHR11771:SF89	LIPOXYGENASE 2, CHLOROPLASTIC	coord: 23..65
IPR036226	Lipoxigenase, C-terminal domain superfamily	SUPERFAMILY	SSF48484	Lipoxigenase	coord: 13..65

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G013050	MELO3C014631.2	Melon (DHL92) v3.6.1	cgybmedB247
CsGy4G013050	CsaV3_4G023880	Cucumber (Chinese Long) v3	cgybcucB171

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G013050	Silver-seed gourd	carcgybB0529
CsGy4G013050	Silver-seed gourd	carcgybB0909
CsGy4G013050	Watermelon (97103) v2	cgybwmbB273
CsGy4G013050	Wax gourd	cgybwgoB373
CsGy4G013050	Cucurbita maxima (Rimu)	cgybcmaB525
CsGy4G013050	Cucurbita maxima (Rimu)	cgybcmaB522
CsGy4G013050	Cucurbita moschata (Rifu)	cgybcmoB493
CsGy4G013050	Cucurbita moschata (Rifu)	cgybcmoB496
CsGy4G013050	Cucurbita pepo (Zucchini)	cgybcpeB496
CsGy4G013050	Cucurbita pepo (Zucchini)	cgybcpeB561
CsGy4G013050	Cucumber (Chinese Long) v2	cgybcuB167
CsGy4G013050	Bottle gourd (USVL1VR-Ls)	cgyblsiB232
CsGy4G013050	Bottle gourd (USVL1VR-Ls)	cgyblsiB234
CsGy4G013050	Melon (DHL92) v3.5.1	cgybmeB249
CsGy4G013050	Watermelon (Charleston Gray)	cgybwcgB272
CsGy4G013050	Watermelon (97103) v1	cgybwmB323
CsGy4G013050	Watermelon (97103) v1	cgybwmB325
CsGy4G013050	Wild cucumber (PI 183967)	cgybcpiB170