CsGy4G011450 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G011450
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 11243437 .. 11245316 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAGTACATATTACTTATTTTCATAAATAATATCGTGAGTAACATTGTATACAAAAACGTTGTCAAGTTATTTAAGTATGACTCAATCTTTTTCTTGCCATGACATATAATTTTATCGAGATCTCCTTACTATCCTTATCTACTTTAAGGTTCTTATGAGTACTCCTTTTCAGGATTTCTTCTAGAATATCCATATTTTTAACTGAGCCATTAATCGATTTATTCTTCGAGGATCCTTTTCCTTGGAACTCGCATTTGTCTATCACGCTTCAAGCGTATAGTATTGACAACTTGTTGTACTGGCACTAGTAGAAAAGTGGTCTACGACGACAGTTATTTACTGTCGTAAACGAAAATCGCGACAGTTATTTTTAATCATAGAAGCGGGAGTCATGGAAAGTCCTTCGATGACAGTTTTAAAAAATTGTCGCAATAAGTTATTTTATGACATGAAATAAATGTCGTTAATCAGAATTCAACGACGTTGAATAACTGTCATATTTTATTTTATGACAACAAATAGCTATCATCATTTGTGTATTAACGACGGTTAAATAAATGTCGCGAATTCATTTATTGTGACAGTTTTTAATTGTCATGAATATGTTAATCGCGACAATTTTTTTTGTATAAAAATGTCATTGTTTTGCTATTGACGACTTTTTTTTCCTGTCAAATATAGGGCAATCGTGACAATTTATTTTATTAAACAACTGTCATCGTTTTCGGATTGACAACAATTAATAACTGTCACAAATTCATTTATTACGTTATTTATTTATTTTCTCTTGCAAATTTCTCAATTTACTACAGTTTTTAGTTTTTTCCTGTTCTCCTTGTCGCTCCACCATTACACGAACTATTTGAATGACAATAATATAGCTAAGAATGACAATTTTGAATTTATAATATTGACACCCATATAGAAAAAAGTAGCCAACACTTTAATATATATTTGATATAATACAATTTATAATATTCGTACATTTCCAATCAAGTGTCAACAATTTACAAGTACGGAATCCCAACCCTTAATCAAAAAATATTTTAAATAGCATTAGAATACATCTAACAAGATTTTCTACAGAAGCATAAACGACCAACCGAGAATGTTCGTCTCTGAAAATATTCTTTGAAAGAAAACTCATGAAGTTGTCGACTCCGGTTGAACCTACAAAGACAACATGAATATAAGCATCCATAACACATACATTTGTGAACCAACATTACCACAACAAAGAAGAAAATCGATAACAATGATTTTCAATCATGGAGATGTCTAAAATTCACCTTTTAGCTAGGATCTTGGGAGGTTGATCTTGTCTTTAGCTTGTTATATTATAGAAGAAATTTTTTTCCCAAAAGTTGTACCAAATGAATTACACAATATCTGCACAAAATGAAGTTCCAATGAATAAAGAGCCAAACTAAAAGGAAAAAAAAAGGTGTATCAATAACAAACCATAATATGTCGCAATGATCATGCTAGAAAGTGTAAGAGAGGGAAAATAATTGTAGCATCCTAGCAGGTATATTGTTGGAAACACAGAAACCACCCTCTCAAAATAGTGGGTCATGACAACTGGTCAGTGTGAAACCAGTCAGCCTAATACTCGAATAGTTGACAAAGGGGTGGGGGTTGATGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTCTCGCTGAATCTTCTCGACAGTTTCCGGGGAATGGGGTGTGGAGAGATGGGCTGAGGAGAATGGAAGAGAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAGGCAAGAAAGACTGCTTTATTAAAGCAGCAACTTAGAACTACAGAGACTAATGAAGATGTGAATTAG

mRNA sequence

ATGTCTAAGTACATATTACTTATTTTCATAAATAATATCCCTAATACTCGAATAGTTGACAAAGGGGTGGGGGTTGATGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTCTCGCTGAATCTTCTCGACAGTTTCCGGGGAATGGGGTGTGGAGAGATGGGCTGAGGAGAATGGAAGAGAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAGGCAAGAAAGACTGCTTTATTAAAGCAGCAACTTAGAACTACAGAGACTAATGAAGATGTGAATTAG

Coding sequence (CDS)

ATGTCTAAGTACATATTACTTATTTTCATAAATAATATCCCTAATACTCGAATAGTTGACAAAGGGGTGGGGGTTGATGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTCTCGCTGAATCTTCTCGACAGTTTCCGGGGAATGGGGTGTGGAGAGATGGGCTGAGGAGAATGGAAGAGAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAGGCAAGAAAGACTGCTTTATTAAAGCAGCAACTTAGAACTACAGAGACTAATGAAGATGTGAATTAG

Protein sequence

MSKYILLIFINNIPNTRIVDKGVGVDVDVDLKNFPVLLAESSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNEDVN
Homology
[Close]
BLAST of CsGy4G011450 vs. NCBI nr
Match: KGN58217.1 (hypothetical protein Csa_3G593690 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 1.6e-36
Identity = 83/91 (91.21%), Postives = 83/91 (91.21%), Query Frame = 0 

Query: 14  PNTRIVDKGVGVD--VDVDLKNFPVLLAESSRQFPGNGVWRDGLRRMEEKNLKDMNEKWV 73
           PNTRIVDK VGVD      LKNFPVLLAE SRQFPGNGVWRDGLRRMEEKNLKDMNEKWV
Sbjct: 11  PNTRIVDKRVGVDXXXXXXLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWV 70

Query: 74  LLHIEGAELKARKTALLKQQLRTTETNEDVN 103
           LLHIEGAELKARKTALLKQQLRTTETNEDVN
Sbjct: 71  LLHIEGAELKARKTALLKQQLRTTETNEDVN 101

[Close]
BLAST of CsGy4G011450 vs. NCBI nr
Match: KGN46890.1 (hypothetical protein Csa_6G148320 [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 6.4e-33
Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = 0 

Query: 17  RIVDKGVGVDVDVDLKNFPVLLAESSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIE 76
           R + +  GV VDVDLKNFPVL+AE SRQFPGNGVWRDGLRRM EKNLKDMNEKWVLLHIE
Sbjct: 143 RSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDGLRRMNEKNLKDMNEKWVLLHIE 202

Query: 77  GAELKARKTALLKQQLRTTETNEDVN 103
           GAELKAR+ ALLK+QLRTTETNEDVN
Sbjct: 203 GAELKARRAALLKEQLRTTETNEDVN 228

[Close]
BLAST of CsGy4G011450 vs. NCBI nr
Match: KCW87452.1 (hypothetical protein EUGRSUZ_B03921 [Eucalyptus grandis])

HSP 1 Score: 66.2 bits (160), Expect = 7.2e-08
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 0 

Query: 30  DLKNFPVLLAESSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLK 89
           DL +FP L+ E  R FPGNGVWR+GL+R+EE  L+ +NE+ V L +E A L A+K  L +
Sbjct: 179 DLGSFPALVEECERCFPGNGVWREGLKRLEEGRLRKVNERVVWLRMEEATLMAKKAELTQ 238

Query: 90  QQLR 94
              R
Sbjct: 239 DLTR 242

[Close]
BLAST of CsGy4G011450 vs. NCBI nr
Match: XP_010045293.1 (PREDICTED: uncharacterized protein LOC104434041 [Eucalyptus grandis])

HSP 1 Score: 66.2 bits (160), Expect = 7.2e-08
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 0 

Query: 30  DLKNFPVLLAESSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLK 89
           DL +FP L+ E  R FPGNGVWR+GL+R+EE  L+ +NE+ V L +E A L A+K  L +
Sbjct: 272 DLGSFPALVEECERCFPGNGVWREGLKRLEEGRLRKVNERVVWLRMEEATLMAKKAELTQ 331

Query: 90  QQLR 94
              R
Sbjct: 332 DLTR 335

[Close]
BLAST of CsGy4G011450 vs. NCBI nr
Match: XP_022756636.1 (probable transcription factor At1g61730 [Durio zibethinus])

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07
Identity = 32/72 (44.44%), Postives = 50/72 (69.44%), Query Frame = 0 

Query: 21  KGVGVDVDVDLKNFPVLLAESSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAEL 80
           KG GV    DL  FP L+AE SR  P N VW++ ++ +EE+ LK M+++WVL+ +E A+L
Sbjct: 119 KGDGV---WDLDKFPYLVAEFSRVLPDNEVWKERMKGLEEEKLKKMDQEWVLIKVEEAKL 178

Query: 81  KARKTALLKQQL 93
            A+K  L+++Q+
Sbjct: 179 VAKKAELMQKQI 187

[Close]
BLAST of CsGy4G011450 vs. TrEMBL
Match: tr|A0A0A0LBY9|A0A0A0LBY9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G593690 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-36
Identity = 83/91 (91.21%), Postives = 83/91 (91.21%), Query Frame = 0 

Query: 14  PNTRIVDKGVGVD--VDVDLKNFPVLLAESSRQFPGNGVWRDGLRRMEEKNLKDMNEKWV 73
           PNTRIVDK VGVD      LKNFPVLLAE SRQFPGNGVWRDGLRRMEEKNLKDMNEKWV
Sbjct: 11  PNTRIVDKRVGVDXXXXXXLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWV 70

Query: 74  LLHIEGAELKARKTALLKQQLRTTETNEDVN 103
           LLHIEGAELKARKTALLKQQLRTTETNEDVN
Sbjct: 71  LLHIEGAELKARKTALLKQQLRTTETNEDVN 101

[Close]
BLAST of CsGy4G011450 vs. TrEMBL
Match: tr|A0A0A0KAX7|A0A0A0KAX7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148320 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.3e-33
Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = 0 

Query: 17  RIVDKGVGVDVDVDLKNFPVLLAESSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIE 76
           R + +  GV VDVDLKNFPVL+AE SRQFPGNGVWRDGLRRM EKNLKDMNEKWVLLHIE
Sbjct: 143 RSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDGLRRMNEKNLKDMNEKWVLLHIE 202

Query: 77  GAELKARKTALLKQQLRTTETNEDVN 103
           GAELKAR+ ALLK+QLRTTETNEDVN
Sbjct: 203 GAELKARRAALLKEQLRTTETNEDVN 228

[Close]
BLAST of CsGy4G011450 vs. TrEMBL
Match: tr|A0A059DA76|A0A059DA76_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03921 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.7e-08
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 0 

Query: 30  DLKNFPVLLAESSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLK 89
           DL +FP L+ E  R FPGNGVWR+GL+R+EE  L+ +NE+ V L +E A L A+K  L +
Sbjct: 179 DLGSFPALVEECERCFPGNGVWREGLKRLEEGRLRKVNERVVWLRMEEATLMAKKAELTQ 238

Query: 90  QQLR 94
              R
Sbjct: 239 DLTR 242

[Close]
BLAST of CsGy4G011450 vs. TrEMBL
Match: tr|A0A1U8P483|A0A1U8P483_GOSHI (uncharacterized protein LOC107954177 OS=Gossypium hirsutum OX=3635 GN=LOC107954177 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07
Identity = 32/81 (39.51%), Postives = 54/81 (66.67%), Query Frame = 0 

Query: 15  NTRIVDKG---VGVDVDVDLKNFPVLLAESSRQFPGNGVWRDGLRRMEEKNLKDMNEKWV 74
           N++  D+G   +G D    L  FP L+AE S+  P N VW+  ++R+EE+ L+ M+++WV
Sbjct: 111 NSKSEDQGAIEMGGDGVEKLDKFPYLVAEFSKVLPENEVWKQKMKRVEEEKLRKMDQEWV 170

Query: 75  LLHIEGAELKARKTALLKQQL 93
           +L +E A+L A+K  L++QQ+
Sbjct: 171 MLKVEEAKLVAKKAELIQQQI 191

[Close]
BLAST of CsGy4G011450 vs. TrEMBL
Match: tr|A0A0D2QP62|A0A0D2QP62_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G117300 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07
Identity = 32/81 (39.51%), Postives = 54/81 (66.67%), Query Frame = 0 

Query: 15  NTRIVDKG---VGVDVDVDLKNFPVLLAESSRQFPGNGVWRDGLRRMEEKNLKDMNEKWV 74
           N++  D+G   +G D    L  FP L+AE S+  P N VW+  ++R+EE+ L+ M+++WV
Sbjct: 111 NSKSEDQGAIEMGGDGVEKLDKFPYLVAEFSKVLPENEVWKQKMKRVEEEKLRKMDQEWV 170

Query: 75  LLHIEGAELKARKTALLKQQL 93
           +L +E A+L A+K  L++QQ+
Sbjct: 171 MLKVEEAKLVAKKAELIQQQI 191

The following BLAST results are available for this feature:
BLAST of CsGy4G011450 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58217.11.6e-3691.21hypothetical protein Csa_3G593690 [Cucumis sativus][more]
KGN46890.16.4e-3384.88hypothetical protein Csa_6G148320 [Cucumis sativus][more]
KCW87452.17.2e-0850.00hypothetical protein EUGRSUZ_B03921 [Eucalyptus grandis][more]
XP_010045293.17.2e-0850.00PREDICTED: uncharacterized protein LOC104434041 [Eucalyptus grandis][more]
XP_022756636.11.2e-0744.44probable transcription factor At1g61730 [Durio zibethinus][more]
BLAST of CsGy4G011450 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G011450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G011450 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LBY9|A0A0A0LBY9_CUCSA1.1e-3691.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G593690 PE=4 SV=1[more]
tr|A0A0A0KAX7|A0A0A0KAX7_CUCSA4.3e-3384.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148320 PE=4 SV=1[more]
tr|A0A059DA76|A0A059DA76_EUCGR4.7e-0850.00Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03921 PE=4 SV... [more]
tr|A0A1U8P483|A0A1U8P483_GOSHI1.1e-0739.51uncharacterized protein LOC107954177 OS=Gossypium hirsutum OX=3635 GN=LOC1079541... [more]
tr|A0A0D2QP62|A0A0D2QP62_GOSRA1.1e-0739.51Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G117300 PE=4 ... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G011450.1CsGy4G011450.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G011450Cucumber (Chinese Long) v2cgybcuB168
CsGy4G011450Wild cucumber (PI 183967)cgybcpiB171
CsGy4G011450Cucumber (Chinese Long) v3cgybcucB171