CsGy4G010450 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGGCTTCTGGTTCTTTTCTTCCTTAAATGCCTCTCCTCGTCTAGAACTCTCCTACAGAACTTCAATACTTATACCCTCTTAACAAAACTTCCAAAATAACAACATTTCTCTTAGGTCTTCACCCTTATTTATACTAATTCTTTGGACCAATTACTCTCTTTATCTGCCAGTTCAGAATTACAACTTTACAACATATCACCTCACCTCATTTATTTGACACAGTGTAGTTATTTGACACACTGTGTTTATTTATTTAACAACTTGTTATTTATTTCACAAACTTTATTGTTATTGTTGTTGTTGTTGTTGCTGCTGCAAAGAGTACAACAAAGTTTGGTCGGGGACTCAACTAGTATGTCTCTTTTATCTACATTTTAAACTTGTTTAACTTTGATAGACTAGCATATGAAAAGTGCGAAACGTGGTGACATAAAAAGGAAAGCAATAGACTAAATTAAGTACACAAGACATAAATATAATGTGGTTTGAGGATGTTTGGACATGCATAGGCAAACAACACTCTGGACAAGCACGCTCATGACACGTTGCAGGCTGAAGAATCTATATTTATTTGTCTATTGTTTAATTATGGATATTTCTTTTAGAAGTACCACCCATTTTACTCTTGATTGATATGTATCCTATGTTTTCTTTTTTTCATCTAGTTTACACAGTCAGAGAGTACTTTGGGTGGAGTAAGTTTATGCATTATTATGTATTTAAATATTTTTGGTATATTTGATAAGTGATAAATTTGTTCTTGTGTGTAGTTAATTTTGATCTTCACTTTAAGTATCAGACTTCAAGCTTTCACTAATGGGGATGATCATTTCTATATCTTGAATGAGTTAGTTTTATATTTTAATCTTAACCAACTGGAAGATCTTCTGTTGTGATGGTTTGGTTTTGGCTCCTTTCTCTGGGCTATTTAAGTTTGGTTTGGACCTTTTGGGTGTTTGAGTGTGGTTGCTAGGCTGTTGAAGTTCAAGCAATCATTTAACTGATTTCAGTGAGTTCATCACACATGGAATCTATCTTTTGCAACAGTTTTCCATTGCAAAAAGGAGGAGTAAGGAGGTCGTTGATGGTCAATGGAGCTCTTGATCAGTAAAGCGGCTTTATGATATTAGATTCAGGGGGAGCACGCCCTAAAGTACATGAGACGAGTTCAGTAAAGAATACTTTCAGAATATAGTTTCAATATTCTAGGAATGACTATGTACAACATGATATTCTTCTACGTTGATGTGTGTACAAATGACAATTATCATGTACTCATAAATCGTTTTATAAGGCAATACATGGATCTCGTTCTATAGGTCGAATACCACCCAAAACTAGATCACCAATTCTTCTGTGTTCGGATTCTGATTATTACTTTTACAGTCTATTATTTATGCTGTTACTTTAGTTATTAATCGCATCTATCTTAAACCATCAAGTTAATCTTGTCTTTCGTTTATCATGAAGTATGAGTAAATGTTTTCGCATTATTTATACTTAACTTGTTTTTCAATCTTATGAATGATAATATAATATATATAACCTTTCTGTGTTTAGTTTGTTTATGGTGTATGAGGTTATAGAGAATGTCATGATGAAGGAAAAACTTTCAAAATGGTTACTTACTGAAGATATGTCAGGCTATGGAAATGGGGTTTGTATAGCATTAGTTATATCTAATGTCATTACAAATCTCTGTGGTATATGA ATGCAGGCTTCTGTTTACACAGTCAGAGAGTACTTTGGGTGGAGTAATTTGTTTATGGTGTATGAGGTTATAGAGAATGTCATGATGAAGGAAAAACTTTCAAAATGGTTACTTACTGAAGATATGTCAGGCTATGGAAATGGGGTTTGTATAGCATTAGTTATATCTAATGTCATTACAAATCTCTGTGGTATATGA ATGCAGGCTTCTGTTTACACAGTCAGAGAGTACTTTGGGTGGAGTAATTTGTTTATGGTGTATGAGGTTATAGAGAATGTCATGATGAAGGAAAAACTTTCAAAATGGTTACTTACTGAAGATATGTCAGGCTATGGAAATGGGGTTTGTATAGCATTAGTTATATCTAATGTCATTACAAATCTCTGTGGTATATGA MQASVYTVREYFGWSNLFMVYEVIENVMMKEKLSKWLLTEDMSGYGNGVCIALVISNVITNLCGI
BLAST of CsGy4G010450 vs. NCBI nr
Match: XP_004137923.2 (PREDICTED: rop guanine nucleotide exchange factor 7-like isoform X1 [Cucumis sativus] >KGN58823.1 hypothetical protein Csa_3G733280 [Cucumis sativus]) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-06 Identity = 30/40 (75.00%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of CsGy4G010450 vs. NCBI nr
Match: XP_011651878.1 (PREDICTED: rop guanine nucleotide exchange factor 7-like isoform X3 [Cucumis sativus]) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-06 Identity = 30/40 (75.00%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of CsGy4G010450 vs. NCBI nr
Match: XP_008442490.1 (PREDICTED: rop guanine nucleotide exchange factor 7-like [Cucumis melo]) HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06 Identity = 30/40 (75.00%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of CsGy4G010450 vs. NCBI nr
Match: XP_010553054.1 (PREDICTED: rop guanine nucleotide exchange factor 7-like [Tarenaya hassleriana]) HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06 Identity = 32/50 (64.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of CsGy4G010450 vs. NCBI nr
Match: XP_011651877.1 (PREDICTED: rop guanine nucleotide exchange factor 7-like isoform X2 [Cucumis sativus]) HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06 Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0
BLAST of CsGy4G010450 vs. TAIR10
Match: AT5G02010.1 (RHO guanyl-nucleotide exchange factor 7) HSP 1 Score: 58.5 bits (140), Expect = 1.7e-09 Identity = 30/41 (73.17%), Postives = 31/41 (75.61%), Query Frame = 0
BLAST of CsGy4G010450 vs. TAIR10
Match: AT5G05940.1 (ROP guanine nucleotide exchange factor 5) HSP 1 Score: 54.3 bits (129), Expect = 3.3e-08 Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of CsGy4G010450 vs. TAIR10
Match: AT4G38430.1 (rho guanyl-nucleotide exchange factor 1) HSP 1 Score: 51.2 bits (121), Expect = 2.8e-07 Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of CsGy4G010450 vs. TAIR10
Match: AT3G55660.1 (ROP (rho of plants) guanine nucleotide exchange factor 6) HSP 1 Score: 50.1 bits (118), Expect = 6.1e-07 Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of CsGy4G010450 vs. TAIR10
Match: AT1G01700.1 (RHO guanyl-nucleotide exchange factor 2) HSP 1 Score: 49.3 bits (116), Expect = 1.0e-06 Identity = 24/34 (70.59%), Postives = 26/34 (76.47%), Query Frame = 0
BLAST of CsGy4G010450 vs. Swiss-Prot
Match: sp|Q9LZN0|ROGF7_ARATH (Rop guanine nucleotide exchange factor 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF7 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 3.1e-08 Identity = 30/41 (73.17%), Postives = 31/41 (75.61%), Query Frame = 0
BLAST of CsGy4G010450 vs. Swiss-Prot
Match: sp|F4K295|ROGF5_ARATH (Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF5 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 5.9e-07 Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of CsGy4G010450 vs. Swiss-Prot
Match: sp|Q93ZY2|ROGF1_ARATH (Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF1 PE=1 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 5.0e-06 Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of CsGy4G010450 vs. Swiss-Prot
Match: sp|Q9M056|ROFG6_ARATH (Rop guanine nucleotide exchange factor 6 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF6 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.1e-05 Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of CsGy4G010450 vs. Swiss-Prot
Match: sp|Q9LQ89|ROGF2_ARATH (Rop guanine nucleotide exchange factor 2 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF2 PE=1 SV=2) HSP 1 Score: 49.3 bits (116), Expect = 1.9e-05 Identity = 24/34 (70.59%), Postives = 26/34 (76.47%), Query Frame = 0
BLAST of CsGy4G010450 vs. TrEMBL
Match: tr|A0A0A0LAD8|A0A0A0LAD8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733280 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 7.4e-07 Identity = 30/40 (75.00%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of CsGy4G010450 vs. TrEMBL
Match: tr|A0A1S3B5B2|A0A1S3B5B2_CUCME (rop guanine nucleotide exchange factor 7-like OS=Cucumis melo OX=3656 GN=LOC103486343 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-06 Identity = 30/40 (75.00%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of CsGy4G010450 vs. TrEMBL
Match: tr|A0A022RS89|A0A022RS89_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a004616mg PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06 Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 0
BLAST of CsGy4G010450 vs. TrEMBL
Match: tr|A0A022QJE0|A0A022QJE0_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a005948mg PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06 Identity = 29/36 (80.56%), Postives = 30/36 (83.33%), Query Frame = 0
BLAST of CsGy4G010450 vs. TrEMBL
Match: tr|A0A2G2YLJ6|A0A2G2YLJ6_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_25565 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.2e-06 Identity = 29/37 (78.38%), Postives = 30/37 (81.08%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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