CsGy4G008590 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G008590
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionWD40 repeat protein
LocationChr4 : 6611340 .. 6612341 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGAATCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCTCTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTATCTCCATTAAAGCCAATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCCGGCGACTCTCTCCGCCTCTGGAAACTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCGTTAACTTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCTTCTGTTTCCGCTGATGGGTCGGTAAGGATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCTGATACCCCTTTGCTCAGACTGGCATGGAACAAACAGGACCTGCGGTATATGGCCACAATTCTGATGGACAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAATTGGAGAGGCATCATTCCAGTGTCAATGCTATAGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCCCTCATCTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATTTGAAATTAACCAGTTGCAGTGGTCTGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGA

mRNA sequence

ATGGAACACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGAATCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCTCTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTATCTCCATTAAAGCCAATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCCGGCGACTCTCTCCGCCTCTGGAAACTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCGTTAACTTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCTTCTGTTTCCGCTGATGGGTCGGTAAGGATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCTGATACCCCTTTGCTCAGACTGGCATGGAACAAACAGGACCTGCGGTATATGGCCACAATTCTGATGGACAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAATTGGAGAGGCATCATTCCAGTGTCAATGCTATAGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCCCTCATCTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATTTGAAATTAACCAGTTGCAGTGGTCTGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGA

Coding sequence (CDS)

ATGGAACACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGAATCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCTCTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTATCTCCATTAAAGCCAATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCCGGCGACTCTCTCCGCCTCTGGAAACTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCGTTAACTTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCTTCTGTTTCCGCTGATGGGTCGGTAAGGATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCTGATACCCCTTTGCTCAGACTGGCATGGAACAAACAGGACCTGCGGTATATGGCCACAATTCTGATGGACAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAATTGGAGAGGCATCATTCCAGTGTCAATGCTATAGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCCCTCATCTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATTTGAAATTAACCAGTTGCAGTGGTCTGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGA

Protein sequence

MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV
Homology
[Close]
BLAST of CsGy4G008590 vs. NCBI nr
Match: NP_001267687.1 (protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus] >ABY64743.1 WD-repeat protein [Cucumis sativus] >KGN53658.1 WD-repeat protein [Cucumis sativus])

HSP 1 Score: 672.9 bits (1735), Expect = 5.5e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0 

Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]
BLAST of CsGy4G008590 vs. NCBI nr
Match: XP_008455615.1 (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo])

HSP 1 Score: 659.1 bits (1699), Expect = 8.2e-186
Identity = 326/333 (97.90%), Postives = 330/333 (99.10%), Query Frame = 0 

Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           S+SIK NPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWK+GDSSIEPLSLLNNSKT
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]
BLAST of CsGy4G008590 vs. NCBI nr
Match: XP_023551826.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 620.9 bits (1600), Expect = 2.5e-174
Identity = 306/339 (90.27%), Postives = 322/339 (94.99%), Query Frame = 0 

Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AA RSEF+ATY+SPHPLYAMAISS H HS NF +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKLGDSSIEPLSL 120
           S+SI+ +PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW++GDSSIEPLS+
Sbjct: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 339

[Close]
BLAST of CsGy4G008590 vs. NCBI nr
Match: XP_022922603.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita moschata])

HSP 1 Score: 618.2 bits (1593), Expect = 1.6e-173
Identity = 305/339 (89.97%), Postives = 320/339 (94.40%), Query Frame = 0 

Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AA RSEF+ATY+SPHPLYAMAISS H HS  F +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKLGDSSIEPLSL 120
           S+SI+ +PSLSF+HPYPPTKLMFNP  LSSL      LASSGD LRLW++GDSSIEPLS+
Sbjct: 61  SLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 339

[Close]
BLAST of CsGy4G008590 vs. NCBI nr
Match: XP_022984362.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita maxima])

HSP 1 Score: 617.1 bits (1590), Expect = 3.6e-173
Identity = 304/339 (89.68%), Postives = 321/339 (94.69%), Query Frame = 0 

Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           M +AA RSEF+ATY+SPHPLYAMAISS H HS NF +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 26  MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 85

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKLGDSSIEPLSL 120
           S+SI+ +PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW++GDSSIEPLS+
Sbjct: 86  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 145

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 146 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 205

Query: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 206 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 265

Query: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 266 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 325

Query: 301 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 326 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 364

[Close]
BLAST of CsGy4G008590 vs. TAIR10
Match: AT5G24520.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 536.6 bits (1381), Expect = 1.1e-152
Identity = 262/335 (78.21%), Postives = 298/335 (88.96%), Query Frame = 0 

Query: 6   SRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIK 65
           SRSE   TY+SP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+SFD DS+++K
Sbjct: 10  SRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILSFDSDSMTVK 69

Query: 66  ANPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKLGD--SSIEPLSLLNNS 125
             P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++EP+S+LNNS
Sbjct: 70  PLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNS 129

Query: 126 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 185
           KTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKEV+DIAWGEA
Sbjct: 130 KTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA 189

Query: 186 RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIV 245
           RVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+V
Sbjct: 190 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 249

Query: 246 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPM 305
           ILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP VAGPNGIDPM
Sbjct: 250 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPM 309

Query: 306 SMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           S+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 310 SVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]
BLAST of CsGy4G008590 vs. TAIR10
Match: AT1G12910.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 409.8 bits (1052), Expect = 1.6e-114
Identity = 205/334 (61.38%), Postives = 255/334 (76.35%), Query Frame = 0 

Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           RSE + TYE+P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSVRR----DKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  NPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKLGD--SSIEPLSLLNNSKTS 126
           +P+LSFEHPYPPTK +F P        LLA+S D LRLW++ D  S +E  S LN++K S
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 137

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG   VF
Sbjct: 138 EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF 197

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVR+FD+RDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS K+V+LD
Sbjct: 198 ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 257

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGIDPMS 306
           IR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+DP+ 
Sbjct: 258 IRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPIL 317

Query: 307 MYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 AYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]
BLAST of CsGy4G008590 vs. TAIR10
Match: AT3G26640.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 404.8 bits (1039), Expect = 5.0e-113
Identity = 203/339 (59.88%), Postives = 254/339 (74.93%), Query Frame = 0 

Query: 2   EHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDS 61
           E  + RSE + TYE+P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSIRR----DKKYRLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  ISIKANPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKLGD--SSIEPLSLLN 121
             I+++P+L FEHPYPPTK  F P        LLA+S D LRLW++ D  S +E  S L+
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLS 132

Query: 122 NSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWG 181
           + K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG
Sbjct: 133 SDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG 192

Query: 182 EARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 241
              VFASVS DGSVR+FD+RDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K
Sbjct: 193 GVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAK 252

Query: 242 IVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNG 301
           IV+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G
Sbjct: 253 IVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGG 312

Query: 302 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           +DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 LDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]
BLAST of CsGy4G008590 vs. TAIR10
Match: AT2G19540.1 (Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 43.9 bits (102), Expect = 2.3e-04
Identity = 33/165 (20.00%), Postives = 52/165 (31.52%), Query Frame = 0 

Query: 129 SFDWNEVEPKRIGTSSIDTTCTIWDIEK---SVVETQFIAHDKEVYDIAW--GEARVFAS 188
           + DW+     R+ +    +   +W+      +V    F  H   V D+ W   E  VFAS
Sbjct: 228 AIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFAS 287

Query: 189 VSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILDIR 248
            S DGSV ++D+R  +                                            
Sbjct: 288 CSVDGSVAVWDIRLGKSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 347

Query: 249 SPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 289
                VA  E H   + +I W+      +     D Q  IW+L +
Sbjct: 348 GGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSL 392

[Close]
BLAST of CsGy4G008590 vs. Swiss-Prot
Match: sp|Q9XGN1|TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 2.0e-151
Identity = 262/335 (78.21%), Postives = 298/335 (88.96%), Query Frame = 0 

Query: 6   SRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIK 65
           SRSE   TY+SP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+SFD DS+++K
Sbjct: 10  SRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILSFDSDSMTVK 69

Query: 66  ANPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKLGD--SSIEPLSLLNNS 125
             P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++EP+S+LNNS
Sbjct: 70  PLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNS 129

Query: 126 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 185
           KTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKEV+DIAWGEA
Sbjct: 130 KTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA 189

Query: 186 RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIV 245
           RVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+V
Sbjct: 190 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 249

Query: 246 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPM 305
           ILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP VAGPNGIDPM
Sbjct: 250 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPM 309

Query: 306 SMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           S+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 310 SVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]
BLAST of CsGy4G008590 vs. Swiss-Prot
Match: sp|Q9LPV9|LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.8e-113
Identity = 205/334 (61.38%), Postives = 255/334 (76.35%), Query Frame = 0 

Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           RSE + TYE+P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSVRR----DKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  NPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKLGD--SSIEPLSLLNNSKTS 126
           +P+LSFEHPYPPTK +F P        LLA+S D LRLW++ D  S +E  S LN++K S
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 137

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG   VF
Sbjct: 138 EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF 197

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVR+FD+RDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS K+V+LD
Sbjct: 198 ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 257

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGIDPMS 306
           IR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+DP+ 
Sbjct: 258 IRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPIL 317

Query: 307 MYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 AYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]
BLAST of CsGy4G008590 vs. Swiss-Prot
Match: sp|Q38960|LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 9.1e-112
Identity = 203/339 (59.88%), Postives = 254/339 (74.93%), Query Frame = 0 

Query: 2   EHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDS 61
           E  + RSE + TYE+P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSIRR----DKKYRLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  ISIKANPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKLGD--SSIEPLSLLN 121
             I+++P+L FEHPYPPTK  F P        LLA+S D LRLW++ D  S +E  S L+
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLS 132

Query: 122 NSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWG 181
           + K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG
Sbjct: 133 SDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG 192

Query: 182 EARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 241
              VFASVS DGSVR+FD+RDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K
Sbjct: 193 GVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAK 252

Query: 242 IVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNG 301
           IV+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G
Sbjct: 253 IVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGG 312

Query: 302 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           +DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 LDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]
BLAST of CsGy4G008590 vs. Swiss-Prot
Match: sp|Q552R1|DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr68 PE=3 SV=2)

HSP 1 Score: 342.4 bits (877), Expect = 5.5e-93
Identity = 182/327 (55.66%), Postives = 233/327 (71.25%), Query Frame = 0 

Query: 13  TYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKANPSLSF 72
           TY SP  +Y ++ SS     +N   R+A+GSF+E+Y NRVD++  + ++   +      F
Sbjct: 8   TYNSPWVIYGLSWSS----RVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEV--VCGF 67

Query: 73  EHPYPPTKLMFNPSPLSS---LLASSGDSLRLWKLGDS--SIEPLSLLNNSKTSEFCAPL 132
           EHPYPPTK M+ P   S+   LLA++GD LRLW++G +  SI+  SLL N   SEFCAPL
Sbjct: 68  EHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTN-VISEFCAPL 127

Query: 133 TSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEAR-VFASVSA 192
           +SFDWNE +P  + TSSIDTTCTIW+IE    +TQ IAHDKEV+DIA+     +FASV A
Sbjct: 128 SSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGA 187

Query: 193 DGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILDIRSPS 252
           DGS+R+FD+R+ EHSTIIYE+P    PLLRL WNKQD  Y+ATI  DS K++ILDIR PS
Sbjct: 188 DGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRVPS 247

Query: 253 VPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAAFE 312
           VP AEL  H S+VN I+WAP S  HIC+  DDKQALIW+L  +  P   DP+  Y+A  E
Sbjct: 248 VPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE-DPLLTYNALAE 307

Query: 313 INQLQWSAAQPDWIALAFSNKMQLLKV 334
           INQL WS++QPDWIA+AFS+ +Q+LKV
Sbjct: 308 INQLSWSSSQPDWIAIAFSSHLQILKV 325

[Close]
BLAST of CsGy4G008590 vs. Swiss-Prot
Match: sp|P61962|DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 7.5e-90
Identity = 179/339 (52.80%), Postives = 226/339 (66.67%), Query Frame = 0 

Query: 14  YESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKANPSLSFE 73
           YE+P  +YAM  S           R+ALGSFVEEYNN+V +V  D +S         +F+
Sbjct: 13  YEAPWTVYAMNWSVRPDKRF----RLALGSFVEEYNNKVQLVGLDEESSEFICRN--TFD 72

Query: 74  HPYPPTKLMFNPSP---LSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTSEFCAPLTSF 133
           HPYP TKLM+ P        LLA+SGD LR+W++G++      LLNN+K S+FCAPLTSF
Sbjct: 73  HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 132

Query: 134 DWNEVEPKRIGTSSIDTTCTIWDIE-----------KSVVETQFIAHDKEVYDIAWGEA- 193
           DWNEV+P  +GTSSIDTTCTIW +E              V+TQ IAHDKEVYDIA+  A 
Sbjct: 133 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 192

Query: 194 ---RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN 253
               +FASV ADGSVR+FD+R  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+ MD  
Sbjct: 193 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAMDGM 252

Query: 254 KIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGI 313
           ++VILD+R P  PVA L  H + VN IAWAP S  HIC+A DD QALIW++  +  P  I
Sbjct: 253 EVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQM--PRAI 312

Query: 314 -DPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            DP+  Y+A  EIN +QW++ QPDWIA+ ++N +++L+V
Sbjct: 313 EDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342

[Close]
BLAST of CsGy4G008590 vs. TrEMBL
Match: tr|B7SBL6|B7SBL6_CUCSA (WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 3.6e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0 

Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]
BLAST of CsGy4G008590 vs. TrEMBL
Match: tr|A0A1S3C1G5|A0A1S3C1G5_CUCME (protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 5.4e-186
Identity = 326/333 (97.90%), Postives = 330/333 (99.10%), Query Frame = 0 

Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           S+SIK NPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWK+GDSSIEPLSLLNNSKT
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]
BLAST of CsGy4G008590 vs. TrEMBL
Match: tr|Q9M610|Q9M610_MALDO (TTG1 OS=Malus domestica OX=3750 GN=TTG1 PE=2 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 3.1e-157
Identity = 269/332 (81.02%), Postives = 303/332 (91.27%), Query Frame = 0 

Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           R+E   TYESP+PLYAMA +SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11  RAENSVTYESPYPLYAMAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  NPSLSFEHPYPPTKLMFNPSP-----LSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTS 126
           NP+LSF+HPYPPTKLMF+P+P      + +LASSGD LRLW++GDS++EP+ +LNNSKTS
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131 EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191 ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMY 306
           IRSP++PVAELERH  SVNAIAWAP+SCRHICSAGDD QALIW+LP VAGPNGIDPMSMY
Sbjct: 251 IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAGPNGIDPMSMY 310

Query: 307 SAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           SA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 311 SAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]
BLAST of CsGy4G008590 vs. TrEMBL
Match: tr|X2EXM4|X2EXM4_9ROSA (TTG1 protein OS=Malus hybrid cultivar OX=604297 GN=TTG1 PE=2 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 5.3e-157
Identity = 268/332 (80.72%), Postives = 303/332 (91.27%), Query Frame = 0 

Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           R+E   TYESP+PLYAMA++SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11  RAENSVTYESPYPLYAMALASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  NPSLSFEHPYPPTKLMFNPSP-----LSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTS 126
           NP+LSF+HPYPPTKLMF+P+P      + +LASSGD LRLW++GDS++EP+ +LNNSKTS
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131 EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191 ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMY 306
           IRSP++PVAELERH  SVNAIAWAP+SCRHICS GDD QALIW+LP VAGPNGIDPMSMY
Sbjct: 251 IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSGGDDTQALIWDLPTVAGPNGIDPMSMY 310

Query: 307 SAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           SA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 311 SAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]
BLAST of CsGy4G008590 vs. TrEMBL
Match: tr|A0A059U7J8|A0A059U7J8_9ROSA (Transcription factor WD40 OS=Malus hybrid cultivar OX=604297 PE=2 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 1.2e-156
Identity = 268/332 (80.72%), Postives = 302/332 (90.96%), Query Frame = 0 

Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           R+E   TYESP+PLYAMA +SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11  RAENSVTYESPYPLYAMAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  NPSLSFEHPYPPTKLMFNPSP-----LSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTS 126
           NP+LSF+HPYPPTKLMF+P+P      + +LASSGD LRLW++GDS++EP+ +LNNSKTS
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131 EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191 ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMY 306
           IRSP++PVAELERH  SVNAIAWAP+SCRHICSAGDD QALIW+LP VAGPNGIDPMSMY
Sbjct: 251 IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAGPNGIDPMSMY 310

Query: 307 SAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           SA  EINQLQWSAAQPDWI++AF NKMQLLKV
Sbjct: 311 SAGAEINQLQWSAAQPDWISIAFPNKMQLLKV 342

The following BLAST results are available for this feature:
BLAST of CsGy4G008590 vs. NCBI nr
Match NameE-valueIdentityDescription
NP_001267687.15.5e-190100.00protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus] >ABY64743.1 WD-repeat ... [more]
XP_008455615.18.2e-18697.90PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo][more]
XP_023551826.12.5e-17490.27protein TRANSPARENT TESTA GLABRA 1 [Cucurbita pepo subsp. pepo][more]
XP_022922603.11.6e-17389.97protein TRANSPARENT TESTA GLABRA 1 [Cucurbita moschata][more]
XP_022984362.13.6e-17389.68protein TRANSPARENT TESTA GLABRA 1 [Cucurbita maxima][more]
BLAST of CsGy4G008590 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24520.11.1e-15278.21Transducin/WD40 repeat-like superfamily protein[more]
AT1G12910.11.6e-11461.38Transducin/WD40 repeat-like superfamily protein[more]
AT3G26640.15.0e-11359.88Transducin/WD40 repeat-like superfamily protein[more]
AT2G19540.12.3e-0420.00Transducin family protein / WD-40 repeat family protein[more]
BLAST of CsGy4G008590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9XGN1|TTG1_ARATH2.0e-15178.21Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 ... [more]
sp|Q9LPV9|LWD1_ARATH2.8e-11361.38WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 S... [more]
sp|Q38960|LWD2_ARATH9.1e-11259.88WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 S... [more]
sp|Q552R1|DCAF7_DICDI5.5e-9355.66DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 ... [more]
sp|P61962|DCAF7_HUMAN7.5e-9052.80DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1[more]
BLAST of CsGy4G008590 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|B7SBL6|B7SBL6_CUCSA3.6e-190100.00WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1[more]
tr|A0A1S3C1G5|A0A1S3C1G5_CUCME5.4e-18697.90protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 ... [more]
tr|Q9M610|Q9M610_MALDO3.1e-15781.02TTG1 OS=Malus domestica OX=3750 GN=TTG1 PE=2 SV=1[more]
tr|X2EXM4|X2EXM4_9ROSA5.3e-15780.72TTG1 protein OS=Malus hybrid cultivar OX=604297 GN=TTG1 PE=2 SV=1[more]
tr|A0A059U7J8|A0A059U7J8_9ROSA1.2e-15680.72Transcription factor WD40 OS=Malus hybrid cultivar OX=604297 PE=2 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045165 cell fate commitment
biological_process GO:0032880 regulation of protein localization
biological_process GO:0009733 response to auxin
biological_process GO:0009723 response to ethylene
biological_process GO:0010026 trichome differentiation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G008590.1CsGy4G008590.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 156..194
e-value: 1.4E-4
score: 31.3
coord: 108..153
e-value: 2.0
score: 15.2
coord: 245..285
e-value: 1.2E-5
score: 34.8
coord: 65..103
e-value: 8.9
score: 11.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 163..194
e-value: 0.088
score: 13.6
coord: 249..284
e-value: 0.023
score: 15.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 163..203
score: 9.305
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 252..286
score: 9.74
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 3..332
e-value: 1.6E-38
score: 134.8
NoneNo IPR availablePANTHERPTHR19919:SF2PROTEIN TRANSPARENT TESTA GLABRA 1coord: 3..333
NoneNo IPR availablePANTHERPTHR19919WD REPEAT CONTAINING PROTEINcoord: 3..333
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 272..286
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 140..154
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 71..294
score: 13.606
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 38..287