CsGy4G005550 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G005550
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	DUF4228 domain-containing protein
Location	Chr4 : 3972562 .. 3973230 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAACTGCTTATTCGCCGGAGGGGCAGGGGAGATTCAGGGGAAAATCAAAGTAATTACATCTAATGGTGGGATTATGGAGTTGGGTTCTCCGATTACTGTTGGTTGTATCGCCGATGAGTTTCCCGGTTACGGAATATTCAAGAGTCATGATCTTTTTTGGAACCCACTTCCTCACAATGAGGAGCTGCTTCCCGGAAAATCATACTACTTGCTTCCGAGAAACAGGGGAAGAAATAGAGGAGGAGAAGATGGGGTGGAGATGGGGATTATAAGGGCGCGTGAAGGGCACGTACGGTCGAATAGTGTGCCGGAAGCGGCGGCGGCGATGGCGGCGATGGCGCCGTATAGAATGTCGTTTGATTATCAGGGGGTTTTGAGGAGGTCACAAACGGAGGTGTTTTCACGGTATAGTGAGAAGAATGGTGGGGTTTGGAAAGTGAAATTGGTGATTAGTCCAAAGAGACTGGTGGAGATTTTGGAAGAAGAAGGACATACTCAAGAATTGATTGAAAGTGTCAGAACTGTGGCGAAATGTGGAAGCACAAGCACGAGCAGTAGCTTCTCGTCGTCAATGGCGTTTTCCGATCAATGGAGTTTGTCGACGGCCACTGCCAATGCTACTCCAAGTGTTTCTTCCAAAAGTGGTGGCTTGTTGGAGATTTAA

mRNA sequence

ATGGGTAACTGCTTATTCGCCGGAGGGGCAGGGGAGATTCAGGGGAAAATCAAAGTAATTACATCTAATGGTGGGATTATGGAGTTGGGTTCTCCGATTACTGTTGGTTGTATCGCCGATGAGTTTCCCGGTTACGGAATATTCAAGAGTCATGATCTTTTTTGGAACCCACTTCCTCACAATGAGGAGCTGCTTCCCGGAAAATCATACTACTTGCTTCCGAGAAACAGGGGAAGAAATAGAGGAGGAGAAGATGGGGTGGAGATGGGGATTATAAGGGCGCGTGAAGGGCACGTACGGTCGAATAGTGTGCCGGAAGCGGCGGCGGCGATGGCGGCGATGGCGCCGTATAGAATGTCGTTTGATTATCAGGGGGTTTTGAGGAGGTCACAAACGGAGGTGTTTTCACGGTATAGTGAGAAGAATGGTGGGGTTTGGAAAGTGAAATTGGTGATTAGTCCAAAGAGACTGGTGGAGATTTTGGAAGAAGAAGGACATACTCAAGAATTGATTGAAAGTGTCAGAACTGTGGCGAAATGTGGAAGCACAAGCACGAGCAGTAGCTTCTCGTCGTCAATGGCGTTTTCCGATCAATGGAGTTTGTCGACGGCCACTGCCAATGCTACTCCAAGTGTTTCTTCCAAAAGTGGTGGCTTGTTGGAGATTTAA

Coding sequence (CDS)

ATGGGTAACTGCTTATTCGCCGGAGGGGCAGGGGAGATTCAGGGGAAAATCAAAGTAATTACATCTAATGGTGGGATTATGGAGTTGGGTTCTCCGATTACTGTTGGTTGTATCGCCGATGAGTTTCCCGGTTACGGAATATTCAAGAGTCATGATCTTTTTTGGAACCCACTTCCTCACAATGAGGAGCTGCTTCCCGGAAAATCATACTACTTGCTTCCGAGAAACAGGGGAAGAAATAGAGGAGGAGAAGATGGGGTGGAGATGGGGATTATAAGGGCGCGTGAAGGGCACGTACGGTCGAATAGTGTGCCGGAAGCGGCGGCGGCGATGGCGGCGATGGCGCCGTATAGAATGTCGTTTGATTATCAGGGGGTTTTGAGGAGGTCACAAACGGAGGTGTTTTCACGGTATAGTGAGAAGAATGGTGGGGTTTGGAAAGTGAAATTGGTGATTAGTCCAAAGAGACTGGTGGAGATTTTGGAAGAAGAAGGACATACTCAAGAATTGATTGAAAGTGTCAGAACTGTGGCGAAATGTGGAAGCACAAGCACGAGCAGTAGCTTCTCGTCGTCAATGGCGTTTTCCGATCAATGGAGTTTGTCGACGGCCACTGCCAATGCTACTCCAAGTGTTTCTTCCAAAAGTGGTGGCTTGTTGGAGATTTAA

Protein sequence

MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPHNEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMSFDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLLEI

Homology

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BLAST of CsGy4G005550 vs. NCBI nr
Match: XP_004146558.1 (PREDICTED: uncharacterized protein LOC101218947 [Cucumis sativus] >KGN53328.1 hypothetical protein Csa_4G047890 [Cucumis sativus])

HSP 1 Score: 391.7 bits (1005), Expect = 1.6e-105
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120
           NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
           FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 223
           GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI
Sbjct: 181 GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 222

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BLAST of CsGy4G005550 vs. NCBI nr
Match: XP_008452047.1 (PREDICTED: uncharacterized protein LOC103493172 [Cucumis melo])

HSP 1 Score: 384.8 bits (987), Expect = 2.0e-103
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120
           NEELLPGKSYYLLPRNRGRNRGGEDG EMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGEEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
           FDYQGVLRRSQTEVFSR SEKNGGVWKVKLVISP+RLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 223
           GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI
Sbjct: 181 GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 222

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BLAST of CsGy4G005550 vs. NCBI nr
Match: XP_023552343.1 (uncharacterized protein LOC111810037 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95
Identity = 188/223 (84.30%), Postives = 190/223 (85.20%), Query Frame = 0


Query: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120
           NEELLPGKSYYLL RNRGRNRG  +  EMGIIRAREGHVRSNSVPEA AA A MAPYRMS
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATAAAAGMAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRYSEKN-GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK 180
           FDYQGVLRRSQTEVFSR SEKN GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK
Sbjct: 121 FDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK 180

Query: 181 CGSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 223
           CGSTS     XXX                TPS SSKSGGLLEI
Sbjct: 181 CGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLLEI 223

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BLAST of CsGy4G005550 vs. NCBI nr
Match: XP_022985129.1 (uncharacterized protein LOC111483212 [Cucurbita maxima])

HSP 1 Score: 357.5 bits (916), Expect = 3.4e-95
Identity = 191/222 (86.04%), Postives = 195/222 (87.84%), Query Frame = 0


Query: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120
           NEELLPGKSYYLL RNRGRNRG  +  EMG+IRAREGHVRSNSVPEA AA A MA YRMS
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVRSNSVPEATAAAAGMASYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
           FDYQGVLRRSQTEVFSR SEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRSSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 223
           GSTS   XXXXXXXXX            TPS S+KSGGLLEI
Sbjct: 181 GSTSTSSXXXXXXXXXDHWSLSSTTANATPSASAKSGGLLEI 222

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BLAST of CsGy4G005550 vs. NCBI nr
Match: XP_022931324.1 (uncharacterized protein LOC111437546 [Cucurbita moschata])

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92
Identity = 186/224 (83.04%), Postives = 189/224 (84.38%), Query Frame = 0


Query: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEA-AAAMAAMAPYRM 120
           NEELLPGKSYYLL RNRGRNRG  +  EMG+IRAREGHVRSNSVPEA AAA A MAPYRM
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVRSNSVPEATAAAAAGMAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRYSEKN-GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180
           SFDYQGVLRRSQTEVFSR SEKN GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA
Sbjct: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180

Query: 181 KCGSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 223
           KCGSTS     XXX                TPS SSKSGGL EI
Sbjct: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLPEI 224

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BLAST of CsGy4G005550 vs. TAIR10
Match: AT1G64700.1 (unknown protein)

HSP 1 Score: 141.0 bits (354), Expect = 9.0e-34
Identity = 88/204 (43.14%), Postives = 116/204 (56.86%), Query Frame = 0


Query: 1   MGNCLFAG-GAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLP 60
           MGNCLF G G  E    IKVI S+GG++E  SP+T G ++  F G+ +F + DL W PL 
Sbjct: 1   MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query: 61  HNEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREG--HVRSNSVPEAAAAMAAMAPY 120
           H+  L+PG+SYYL P            +    ++   G  HVRSNS      +++A+ PY
Sbjct: 61  HDHLLVPGQSYYLFP-----------NIVSDELKTFVGSCHVRSNS-----ESLSAITPY 120

Query: 121 RMSFDY-QGVLRRSQTEVFSRYS----------------EKNGGVWKVKLVISPKRLVEI 180
           RMS DY   VL+RS T+VFSR S                   G +WKV L+I+ + L++I
Sbjct: 121 RMSLDYNHRVLKRSYTDVFSRNSHIRTRQKEKKTRRRRTSSKGAIWKVNLIINTEELLQI 180

Query: 181 LEEEGHTQELIESVRTVAKCGSTS 185
           L E+G T ELIESVR VAK G TS
Sbjct: 181 LSEDGRTNELIESVRAVAK-GETS 187

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BLAST of CsGy4G005550 vs. TAIR10
Match: AT3G61920.1 (unknown protein)

HSP 1 Score: 115.5 bits (288), Expect = 4.1e-26
Identity = 75/189 (39.68%), Postives = 97/189 (51.32%), Query Frame = 0


Query: 1   MGNCLFAGGAG------EIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLF 60
           MGNC+F G  G      +    IKV+T NGG+MEL  PI    I +EFPG+ I  S  L 
Sbjct: 1   MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query: 61  WN--PLPHNEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMA 120
            +  PL H EEL PG  YYLLP +                        + +  +  ++  
Sbjct: 61  HSSPPLLHGEELFPGNIYYLLPLSSS----------------------AAATAQLDSSDQ 120

Query: 121 AMAPYRMSFDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIE 180
              PYRMSF         +T + +  S    GVWKV+LVISP++L EIL E+  T+ L+E
Sbjct: 121 LSTPYRMSF--------GKTPIMAALSGGGCGVWKVRLVISPEQLAEILAEDVETEALVE 159

Query: 181 SVRTVAKCG 182
           SVRTVAKCG
Sbjct: 181 SVRTVAKCG 159

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BLAST of CsGy4G005550 vs. TAIR10
Match: AT4G10910.1 (unknown protein)

HSP 1 Score: 41.2 bits (95), Expect = 9.7e-04
Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 0


Query: 140 EKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 179
           ++  GVWK K+VI  K+L EIL  EG+T  LI+ +R  A
Sbjct: 71  QRRNGVWKAKVVIGSKQLEEILAVEGNTHALIDQLRFAA 109

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BLAST of CsGy4G005550 vs. TAIR10
Match: AT5G03890.1 (unknown protein)

HSP 1 Score: 41.2 bits (95), Expect = 9.7e-04
Identity = 27/74 (36.49%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 1  MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
          MGNCL        +  IK++  +G ++E   PI+V  I  +F G+ I  SH+     L  
Sbjct: 1  MGNCLVME-----KKVIKIVRDDGKVLEYREPISVHHILTQFSGHSI--SHNN--THLLP 60

Query: 61 NEELLPGKSYYLLP 75
          + +LL G+ YYLLP
Sbjct: 61 DAKLLSGRLYYLLP 65

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BLAST of CsGy4G005550 vs. TrEMBL
Match: tr|A0A0A0KUU6|A0A0A0KUU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047890 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.1e-105
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120
           NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
           FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 223
           GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI
Sbjct: 181 GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 222

[Close]

BLAST of CsGy4G005550 vs. TrEMBL
Match: tr|A0A1S3BSZ8|A0A1S3BSZ8_CUCME (uncharacterized protein LOC103493172 OS=Cucumis melo OX=3656 GN=LOC103493172 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.3e-103
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120
           NEELLPGKSYYLLPRNRGRNRGGEDG EMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGEEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
           FDYQGVLRRSQTEVFSR SEKNGGVWKVKLVISP+RLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 223
           GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI
Sbjct: 181 GSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 222

[Close]

BLAST of CsGy4G005550 vs. TrEMBL
Match: tr|A0A2N9E173|A0A2N9E173_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS289 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.4e-57
Identity = 120/182 (65.93%), Postives = 141/182 (77.47%), Query Frame = 0


Query: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG GE+ G IKV+TSNGGIME  +PITVG I  EFP +GIF+SHDLFW PL H
Sbjct: 1   MGNCLF-GGLGEVDGVIKVVTSNGGIMEFYAPITVGSITTEFPSHGIFRSHDLFWKPLSH 60

Query: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120
           +EEL+ GKSYYLLP N        D +E G I  R+GH+RSNS+P      + +APYRMS
Sbjct: 61  HEELVAGKSYYLLPLN------ATDTLEQGQI-VRQGHIRSNSIPS-----SLVAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
           FDYQGVL+RS T+VFSRY+  NG  WKVKLVISP++L+EIL +EG TQELIESVRTVAKC
Sbjct: 121 FDYQGVLKRSYTDVFSRYN--NGRFWKVKLVISPEQLLEILSQEGRTQELIESVRTVAKC 167

Query: 181 GS 183
           G+
Sbjct: 181 GN 167

[Close]

BLAST of CsGy4G005550 vs. TrEMBL
Match: tr|A0A061G2R1|A0A061G2R1_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_015620 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-56
Identity = 120/182 (65.93%), Postives = 139/182 (76.37%), Query Frame = 0


Query: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG GE  G IKVITS+GG+ME  +PIT G I DEFPG+ IF+SHDLFW PL H
Sbjct: 143 MGNCLF-GGLGEADGVIKVITSSGGVMEFSAPITAGSITDEFPGHAIFRSHDLFWKPLFH 202

Query: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120
           +EELLPGKSYYLLP N G++  G  G  +     REGHVRSNS+P      + +APYRMS
Sbjct: 203 HEELLPGKSYYLLPLN-GKDTSGNSGQIV-----REGHVRSNSIP-----ASLVAPYRMS 262

Query: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
            DYQG L+RS T+VFSRY+ K  G WKVKLVISP++L+EIL +E  TQELIESVRTVAKC
Sbjct: 263 CDYQGTLKRSHTDVFSRYN-KPAGFWKVKLVISPEQLLEILSQEARTQELIESVRTVAKC 311

Query: 181 GS 183
           GS
Sbjct: 323 GS 311

[Close]

BLAST of CsGy4G005550 vs. TrEMBL
Match: tr|A0A2P5CJF4|A0A2P5CJF4_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_282920 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.1e-55
Identity = 116/183 (63.39%), Postives = 137/183 (74.86%), Query Frame = 0


Query: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG G+ +G IKV+TSNGG+ME  +PITVG IADEFPG+GIF++ DLFW PL H
Sbjct: 1   MGNCLF-GGLGDPEGMIKVVTSNGGVMEFFAPITVGSIADEFPGHGIFRNQDLFWKPLSH 60

Query: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120
            EEL+ G SYYLLP + G   GG    ++     REGHVRSNS+P    A + +APYRMS
Sbjct: 61  QEELVAGHSYYLLPLSGG---GGSASGDINASIVREGHVRSNSIP----ASSVVAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSR---YSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTV 180
           FDYQG L+RS TEVFS    Y    GG WKVKLVI+P++L+EIL +EG TQELIESVRTV
Sbjct: 121 FDYQGTLKRSYTEVFSTRGPYYNHGGGFWKVKLVIAPEQLLEILSQEGRTQELIESVRTV 175

The following BLAST results are available for this feature:

BLAST of CsGy4G005550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146558.1	1.6e-105	100.00	PREDICTED: uncharacterized protein LOC101218947 [Cucumis sativus] >KGN53328.1 hy...	[more]
XP_008452047.1	2.0e-103	98.65	PREDICTED: uncharacterized protein LOC103493172 [Cucumis melo]	[more]
XP_023552343.1	2.0e-95	84.30	uncharacterized protein LOC111810037 [Cucurbita pepo subsp. pepo]	[more]
XP_022985129.1	3.4e-95	86.04	uncharacterized protein LOC111483212 [Cucurbita maxima]	[more]
XP_022931324.1	2.1e-92	83.04	uncharacterized protein LOC111437546 [Cucurbita moschata]	[more]

BLAST of CsGy4G005550 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64700.1	9.0e-34	43.14	unknown protein	[more]
AT3G61920.1	4.1e-26	39.68	unknown protein	[more]
AT4G10910.1	9.7e-04	48.72	unknown protein	[more]
AT5G03890.1	9.7e-04	36.49	unknown protein	[more]

BLAST of CsGy4G005550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy4G005550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KUU6\|A0A0A0KUU6_CUCSA	1.1e-105	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047890 PE=4 SV=1	[more]
tr\|A0A1S3BSZ8\|A0A1S3BSZ8_CUCME	1.3e-103	98.65	uncharacterized protein LOC103493172 OS=Cucumis melo OX=3656 GN=LOC103493172 PE=...	[more]
tr\|A0A2N9E173\|A0A2N9E173_FAGSY	2.4e-57	65.93	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS289 PE=4 SV=1	[more]
tr\|A0A061G2R1\|A0A061G2R1_THECC	2.1e-56	65.93	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_015620 PE=4 SV=1	[more]
tr\|A0A2P5CJF4\|A0A2P5CJF4_9ROSA	5.1e-55	63.39	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_282920 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G005550.1	CsGy4G005550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..163 e-value: 3.7E-17 score: 63.2
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 1..208
None	No IPR available	PANTHER	PTHR33148:SF10	SUBFAMILY NOT NAMED	coord: 1..208

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G005550	Cla014611	Watermelon (97103) v1	cgybwmB288
CsGy4G005550	Csa4G047890	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G005550	MELO3C016367	Melon (DHL92) v3.5.1	cgybmeB269
CsGy4G005550	ClCG07G008260	Watermelon (Charleston Gray)	cgybwcgB303
CsGy4G005550	CSPI04G05680	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G005550	CmaCh04G007430	Cucurbita maxima (Rimu)	cgybcmaB547
CsGy4G005550	CmaCh16G006040	Cucurbita maxima (Rimu)	cgybcmaB498
CsGy4G005550	CmoCh16G006580	Cucurbita moschata (Rifu)	cgybcmoB467
CsGy4G005550	Lsi07G002710	Bottle gourd (USVL1VR-Ls)	cgyblsiB277
CsGy4G005550	Cp4.1LG01g06650	Cucurbita pepo (Zucchini)	cgybcpeB502
CsGy4G005550	Cp4.1LG14g02130	Cucurbita pepo (Zucchini)	cgybcpeB487
CsGy4G005550	MELO3C016367.2	Melon (DHL92) v3.6.1	cgybmedB266
CsGy4G005550	CsaV3_4G005840	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G005550	Cla97C07G135390	Watermelon (97103) v2	cgybwmbB305
CsGy4G005550	Bhi01G001854	Wax gourd	cgybwgoB354
CsGy4G005550	Carg14140	Silver-seed gourd	carcgybB0931
CsGy4G005550	Carg05725	Silver-seed gourd	carcgybB1005

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G005550	Wax gourd	cgybwgoB361
CsGy4G005550	Cucurbita moschata (Rifu)	cgybcmoB521
CsGy4G005550	Cucurbita pepo (Zucchini)	cgybcpeB479
CsGy4G005550	Bottle gourd (USVL1VR-Ls)	cgyblsiB280