CsGy4G004530 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCTGGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCCAACCACCCTCTTCGTCTCAAAGGTACGCTTCTTCTACTATTTCGAACGACACGTCGTTTTGGGTCTCATCGTATTCAATGTGACGACAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGGTATAAAAATGAAAAAGAGAAAGGAGGAAAAATAAAAACAGGGGGTTCTCTGTTCTGTAAGACGACATGTCGTTTAGCGAGTCTCAGGGTTCTTTTTATTTTTATTGTTTGGTTTATTTTAGGAACTATAAAAGTGGATATGTGTGGAACGACTTGTCGGAAAATGACGTGGTTTATCCCGCTGAAGGTTATGAATACGTTCTCAAGGCATCTCAACTTGTTGATCTTCATGCCTCCTGTGGTGATTTTTTGTCTTTATATCTATCTATAATTTTCTTCATAAATGATTTTGCAGTTTAAATTTAATATTCAAACTTTACATATATTTAAAAATTAATTGCGAAGAGATTACTATTTATTATTATTATTATTGGGAGAAATCACCATTTTAATTTGTTATAATTTAAATTCAACTTGCTTTTAGTATGATCATGGGTGTACGAATGGTGTACATTTGATCGGTGAAATATGATGGGCAAAATGAAATTACATGCTCATCATCATAGAGAGATTTTGCAGATTCATAATTATTCTTGAATTAATGAGTTCATGATTCTTGAATTCTCATTAATGAGCTTCTTTTCTTTTGGTTAAGTGTTTTAAAAGTAACTGAAAATTTGAATGATGTGTCAAGCTTTTAAATAATGTTTAATAGGTCTTTCAATTTTTAACTCATGATTGTACTATAATAATATTATATTTGAACAGTTTTATTTGCTATAAAAATTAAATTCAAATTTATAAAGTTATTAAAAAAATTTAAAAAAATATGAAATTTTGGGCTACCAATTATAAAACAATTTGTGATGTCACGGAAATACTGTATCATAATTCATTTCAAAATAGTTTATATTATATTTATTTCTCAGAAAAATTGCAGCAAGTACACATACCCAACAACAACCCAAGGCAACCGGTTCAAGAACCCAACCTCCCAACTAAAACTCGGAAACAGCAACTCGCACCCACTCCACTCCCCCACCACCCACATTCCGATTTAGAATACGACGAAGACGAAGATTACGAATACGACGATGGCGATAAGAACGCTGGGGAACCCCCCGGGACAACTCAGACTCCGACCGAGTCGGCTCGATGTTCCACTTCGAAACGGTTTGCCTTGAATAACGACGACGAACTAGGGATCGAGTCGGGTCCGAGTCGGAATTCGGTTCTGATGCAGTTTATAGGGTGTGGTGGGTCAGTGGGTTCGAAGGGGAAAACCGTGAGAAGAACGGAGAAGGGGATAGGGAAAGGGGTTGTGTGTAAAATGGGGGGAAATATGATGAGAGAAGAGGAAATGATAAAGTATATGTCAGAGAATCCGAGGTTGGGGAAATTGCAGAGAGAGGAGAAGGAGTATTTTAGTGGCTCCATTGTGGAGTCCATTAGAGAAGATCGGCATGTCATCCCACCTATGCTCAACAAGTCCAACTCCTATAAAGAAGAAAAGTAAGTACGATTTTCCATTCTTTTTAATACAATAAAAGTCCTATAAAAACAATTTTAGATAAATACAGCAATTATTAAGCATTGCCTAATTATTTTATTTTTGGTTTTGAAAATTAATCTTACTTTTTTTTTGCATTATTATTCAGGCTGAAAAGGTTTTTTTTTTTTTTTTTGGCTTTCGACTTTTAATTTTGCAAAATTGGGCTGTAGATACTATTTTTAACTATGAGTTCCTTTGTTTACTTAATTTTTTGGGTTTTTCTTAAAAAAAATTGGTAAAAAAGTCCAAATTATTTAGGACTAAAATCAATTACACTTAATTTTTTTATAAAATATAAATATTTTGTCCATTTTTTTACAATTTTTTTAATTAATTTAACTTTTTACAAGGTCAAAAACTTTGAAAGAAACATGTAGTTTGTAATTGTTTTTAAATTTAACCTTGTGATTCATGAAAATCACCTATATAAAAAAAAGACTTTGATAAAAAATCGAGTGGCACCAGTCTTTCGTGCATTTTGACTAGCACTAAATAGGAATGTGTCAAACAACATTATTTTCAAGTGTGTAAAAGAGAGGGAATGATAAGATTCGGTGTATCCAACCATCGTTAATAAAACAGTCATACCATTAAAAAAAATTAAAAACAAAAAGAACAAAAGAATCTATCACATTTTCTAAAACTAAATTATTGATATTGATGAGTACCAAAATTGTTATATAATAATAACTATCAAAATGTCACAATCATATAGGTTTGTTTAGTATTTGTCCATTTGAATAGTTATGAAAATGTTGAGAATATTATGAGATTTTATATTTAGGAGCAAAAGGGAAGAATTGGAAGAGAAAAAAGATGAAGATGAAGATGAAGAGAATGAGAATGAGAATGGTGGGATCAAAGGAAGGTGCCTTCCTCTCATGATATTGACCTCAACCTCATCAAAGCAACCCAAGAAGCCTTGAAACTCACTTCCATGCAAACCCCCCACATTGCTTTTGTTCAAGTTTTGATTGTAGTTAAAAATTTTATGGTGAGCTCCAAATTTTGTGTTTTCTAAGAGTTTGTTTGTTTTGCACAATGCTTGCTTCTTGACTACATATTTTGTGATCTCGTGACAAAAATTTGAAGGGACAAATACATCTTAGGTATAAGGGTTTAAATGTTTGCTGTTTATATGTATAATGTACTACTAACAACTACAGTATACATACTTCTATATTTTTCTTCATTAACTTTGAGTTAAGTTTTAGATACATACTTTAAACGATTCTTTTAGTAATTTTTATTTCTACTTTTCATTTTTTTAAGAAACATACA ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCTGGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCCAACCACCCTCTTCGTCTCAAAGGTACGCTTCTTCTACTATTTCGAACGACACGTCGTTTTGGGTCTCATCGTATTCAATGTGACGACAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGGAACTATAAAAGTGGATATGTGTGGAACGACTTGTCGGAAAATGACGTGGTTTATCCCGCTGAAGGTTATGAATACGTTCTCAAGGCATCTCAACTTGTTGATCTTCATGCCTCCTGTGAAAAATTGCAGCAAGTACACATACCCAACAACAACCCAAGGCAACCGGTTCAAGAACCCAACCTCCCAACTAAAACTCGGAAACAGCAACTCGCACCCACTCCACTCCCCCACCACCCACATTCCGATTTAGAATACGACGAAGACGAAGATTACGAATACGACGATGGCGATAAGAACGCTGGGGAACCCCCCGGGACAACTCAGACTCCGACCGAGTCGGCTCGATGTTCCACTTCGAAACGGTTTGCCTTGAATAACGACGACGAACTAGGGATCGAGTCGGGTCCGAGTCGGAATTCGGTTCTGATGCAGTTTATAGGGTGTGGTGGGTCAGTGGGTTCGAAGGGGAAAACCGTGAGAAGAACGGAGAAGGGGATAGGGAAAGGGGTTGTGTGTAAAATGGGGGGAAATATGATGAGAGAAGAGGAAATGATAAAGTATATGTCAGAGAATCCGAGGTTGGGGAAATTGCAGAGAGAGGAGAAGGAGTATTTTAGTGGCTCCATTGTGGAGTCCATTAGAGAAGATCGGCATGTCATCCCACCTATGCTCAACAAGTCCAACTCCTATAAAGAAGAAAAGAGCAAAAGGGAAGAATTGGAAGAGAAAAAAGATGAAGATGAAGATGAAGAGAATGAGAATGAGAATGGTGGGATCAAAGGAAGGTGCCTTCCTCTCATGATATTGACCTCAACCTCATCAAAGCAACCCAAGAAGCCTTGAAACTCACTTCCATGCAAACCCCCCACATTGCTTTTGTTCAAGTTTTGATTGTAGTTAAAAATTTTATGGTGAGCTCCAAATTTTGTGTTTTCTAAGAGTTTGTTTGTTTTGCACAATGCTTGCTTCTTGACTACATATTTTGTGATCTCGTGACAAAAATTTGAAGGGACAAATACATCTTAGGTATAAGGGTTTAAATGTTTGCTGTTTATATGTATAATGTACTACTAACAACTACAGTATACATACTTCTATATTTTTCTTCATTAACTTTGAGTTAAGTTTTAGATACATACTTTAAACGATTCTTTTAGTAATTTTTATTTCTACTTTTCATTTTTTTAAGAAACATACA ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCTGGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCCAACCACCCTCTTCGTCTCAAAGGTACGCTTCTTCTACTATTTCGAACGACACGTCGTTTTGGGTCTCATCGTATTCAATGTGACGACAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGGAACTATAAAAGTGGATATGTGTGGAACGACTTGTCGGAAAATGACGTGGTTTATCCCGCTGAAGGTTATGAATACGTTCTCAAGGCATCTCAACTTGTTGATCTTCATGCCTCCTGTGAAAAATTGCAGCAAGTACACATACCCAACAACAACCCAAGGCAACCGGTTCAAGAACCCAACCTCCCAACTAAAACTCGGAAACAGCAACTCGCACCCACTCCACTCCCCCACCACCCACATTCCGATTTAGAATACGACGAAGACGAAGATTACGAATACGACGATGGCGATAAGAACGCTGGGGAACCCCCCGGGACAACTCAGACTCCGACCGAGTCGGCTCGATGTTCCACTTCGAAACGGTTTGCCTTGAATAACGACGACGAACTAGGGATCGAGTCGGGTCCGAGTCGGAATTCGGTTCTGATGCAGTTTATAGGGTGTGGTGGGTCAGTGGGTTCGAAGGGGAAAACCGTGAGAAGAACGGAGAAGGGGATAGGGAAAGGGGTTGTGTGTAAAATGGGGGGAAATATGATGAGAGAAGAGGAAATGATAAAGTATATGTCAGAGAATCCGAGGTTGGGGAAATTGCAGAGAGAGGAGAAGGAGTATTTTAGTGGCTCCATTGTGGAGTCCATTAGAGAAGATCGGCATGTCATCCCACCTATGCTCAACAAGTCCAACTCCTATAAAGAAGAAAAGAGCAAAAGGGAAGAATTGGAAGAGAAAAAAGATGAAGATGAAGATGAAGAGAATGAGAATGAGAATGGTGGGATCAAAGGAAGGTGCCTTCCTCTCATGATATTGACCTCAACCTCATCAAAGCAACCCAAGAAGCCTTGA MEEKDRDHHHRHHRRRDSPTPMKKPKFFTISPETAVWNNPIFSKSLSSPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKRNYKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNAGEPPGTTQTPTESARCSTSKRFALNNDDELGIESGPSRNSVLMQFIGCGGSVGSKGKTVRRTEKGIGKGVVCKMGGNMMREEEMIKYMSENPRLGKLQREEKEYFSGSIVESIREDRHVIPPMLNKSNSYKEEKSKREELEEKKDEDEDEENENENGGIKGRCLPLMILTSTSSKQPKKP
BLAST of CsGy4G004530 vs. NCBI nr
Match: KGN53217.1 (hypothetical protein Csa_4G027920 [Cucumis sativus]) HSP 1 Score: 484.6 bits (1246), Expect = 3.2e-133 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CsGy4G004530 vs. NCBI nr
Match: XP_011653119.1 (PREDICTED: protein UPSTREAM OF FLC isoform X2 [Cucumis sativus]) HSP 1 Score: 460.3 bits (1183), Expect = 6.4e-126 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of CsGy4G004530 vs. NCBI nr
Match: XP_011653118.1 (PREDICTED: protein UPSTREAM OF FLC isoform X1 [Cucumis sativus]) HSP 1 Score: 436.0 bits (1120), Expect = 1.3e-118 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of CsGy4G004530 vs. NCBI nr
Match: XP_023525139.1 (protein UPSTREAM OF FLC isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 291.2 bits (744), Expect = 5.1e-75 Identity = 205/405 (50.62%), Postives = 235/405 (58.02%), Query Frame = 0
BLAST of CsGy4G004530 vs. NCBI nr
Match: XP_022980967.1 (protein UPSTREAM OF FLC isoform X1 [Cucurbita maxima]) HSP 1 Score: 289.7 bits (740), Expect = 1.5e-74 Identity = 201/373 (53.89%), Postives = 228/373 (61.13%), Query Frame = 0
BLAST of CsGy4G004530 vs. TAIR10
Match: AT5G10150.1 (Domain of unknown function (DUF966)) HSP 1 Score: 137.5 bits (345), Expect = 1.7e-32 Identity = 102/308 (33.12%), Postives = 145/308 (47.08%), Query Frame = 0
BLAST of CsGy4G004530 vs. TAIR10
Match: AT3G46110.1 (Domain of unknown function (DUF966)) HSP 1 Score: 98.6 bits (244), Expect = 8.9e-21 Identity = 82/265 (30.94%), Postives = 114/265 (43.02%), Query Frame = 0
BLAST of CsGy4G004530 vs. TAIR10
Match: AT2G28150.1 (Domain of unknown function (DUF966)) HSP 1 Score: 82.8 bits (203), Expect = 5.0e-16 Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of CsGy4G004530 vs. TAIR10
Match: AT5G59790.1 (Domain of unknown function (DUF966)) HSP 1 Score: 81.6 bits (200), Expect = 1.1e-15 Identity = 34/58 (58.62%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of CsGy4G004530 vs. TAIR10
Match: AT1G05577.1 (Domain of unknown function (DUF966)) HSP 1 Score: 71.6 bits (174), Expect = 1.2e-12 Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of CsGy4G004530 vs. Swiss-Prot
Match: sp|Q9LX14|UFC_ARATH (Protein UPSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=UFC PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.1e-31 Identity = 102/308 (33.12%), Postives = 145/308 (47.08%), Query Frame = 0
BLAST of CsGy4G004530 vs. TrEMBL
Match: tr|A0A0A0KXS9|A0A0A0KXS9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G027920 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 2.1e-133 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CsGy4G004530 vs. TrEMBL
Match: tr|D7TRB3|D7TRB3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0357g00090 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 4.5e-43 Identity = 138/356 (38.76%), Postives = 178/356 (50.00%), Query Frame = 0
BLAST of CsGy4G004530 vs. TrEMBL
Match: tr|A0A1U8AGV9|A0A1U8AGV9_NELNU (protein UPSTREAM OF FLC-like OS=Nelumbo nucifera OX=4432 GN=LOC104600101 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 1.7e-42 Identity = 130/350 (37.14%), Postives = 163/350 (46.57%), Query Frame = 0
BLAST of CsGy4G004530 vs. TrEMBL
Match: tr|A0A2K2AD62|A0A2K2AD62_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G078300v3 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 2.2e-42 Identity = 162/418 (38.76%), Postives = 205/418 (49.04%), Query Frame = 0
BLAST of CsGy4G004530 vs. TrEMBL
Match: tr|M1BUI4|M1BUI4_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 2.1e-40 Identity = 130/359 (36.21%), Postives = 167/359 (46.52%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |