CsGy4G004240 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G004240
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionSuperoxide dismutase
LocationChr4 : 2776550 .. 2781168 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAATGGAACATCTATTTTAATAATATTTACATAATTTGGTTTATAGTAAAAATTAAAAAAGAAGGTAAAAACAAACTGGGCTGGGTCGAGTATACGAAGCCCAGCCCACGATGTTGGGCGTCGGCTTCTTCTTTCATAACCATTGTCCAATATGCAGGAGCAAACGCACAGGGCAAGACACGAGCAAAACGGATATGGCCGCATCTATCGCTTTGCCACCTTCCACTAAACTACACCAAAATCAACTTCACCATTCAAGCTTCCGCGGTAGCCCACTGCCACCTTCTGCCACTCCTTGTACCTCAATTAAGCAGGTATTCGTTTTCTGTTGCTTGTTATTTGTTTAATCTCCCGTGAAATTTCATCTCGATACATATGCTTGGTTTGATGGCCATTTCTATGAAAATTGTTCGAACAAGTTGATGGAACTCGGAGTGTTTGTGCGTCTTTTATACACGTATCTTTATACGTGTTTGTATGTCTATGTATGTATGTATGTACAAAAAGTGCTAGAACATGTTGCTGGAGCTTGAACTGTAATCTCTCACTCGTTTTAAAATGAACGTGACTCGAAAATTGGCTATGAGAGTTGAATAGGGAGGAGATGAAGTTAAAAAATTGGATGATAAGAAGCATGGGAATGGATACGAGACACTGGTATAAAAAGATACGGACATGCACGGCACCATATAATTTCATGATAATCTAGGGCAGAAACACAACGAGTACACGTTTTTTTAAATTTATATCAATTTTATACCCGAAGAATGCTCAATTTCAAATTTTATTGATCGTGTTTGGATGCTCGGACACGGACACAGACACTTTACCCAAACTAAAGTTTTTGTGCGTCTTGGTAGACTTATTTAATCCTTTATGTACGCTATAAACAGGCATATTAAGTTTAGATAAGTAATAATTAGTATAGTATCAGAGAGAGAGAGAGAGAGACAAAACTCTTCAATCTATGTTCTCTTTGTTTGGTTTTGGTAGTTTACATGTGACTTCTTGTGCTATTGGCAGTGTTATGAAAATATTGTAGAGATTAAATTTAATATTTTGGAACTTGTCTTGAGAAGTTTTGAAATTTTCATCAGCAAACCTTTTGATGGAATGAATACAAGTGCGGCTAAATTAAGCTCGAACTTTGTTTTTTTTGTGTGGGGCAGAAACAACATGGTTCAAAGACTTATCTCACCAAAATCAGTGCGAAGTTTGAACTGAAGCCTCCTCCATATCCTCTGGTATGTCAGCATGTAATATCACTTGGTTCAACTTTTAACGCTCTCTAGTTTTTAGAAAATAGTAGCTGTAAATGTTTCCTGGGTTTTAGTTGGAGTTTACTTGATTTAACAGCATAATGCCTCTACGATGTTCTTGTCGAGTCTTTAGATTTTAGGAAAACTTGATCTTGTTATCAACCACTTTTGGATAATTTCCCTAAGCTTGAACTCAAGATTCAGAAGGTGTTCCTAGATTCGACGTATTGTCAGTTCTTACCTACAGAATCGCTCCTTGAGGACTCTAGTTAAATATGAAAAACGATACACATGATCATGAATTTGTTATTTGTACCAGTGAACACTACAAGATTTGCATCCCAACGTAACTCATCATTTATTTGAGAATAACGGCCATGAATAAAATCATCTGCCATGGTCAAATGAATTAACTCTCTAGTTTGGTATCTCTTCTTGATGTATCACTCGTTGATTATTTCATTTGCTTCTGTTCACAACAAATGTACGATTGAAAGTTCACCATAACCCAAAAACTTTAGCTTGGTACAGTTGAAATTTAGAAATGTAACAAAAAAGAAAAAAGAAAGAAGACGCTAAGATTCATCGCTTTACTTGTTTGCATTATATGTACTTGTAAATAGGACTACCTCTTTGTCAAAAGAGAGTAAGACTACCTCTTATTTCTACAAAGTGTGCTTCATAGGATGCTTTGGAACCACATATGAGTCGTTCAACCCTTGAGTATCATTGGGGAAAACATCACAGAGCTTATGTGGACAACCTTAACAGACAGATAGAGGGAACTGAGCTGGAGGAATTATCACTAGAAGATATCATAATGAAAACATACAAAAAAGGCAATATCCTTCAGCAATTCAACAATGCAGCACAGGTACACACCTTTCACATAATTACCAACGTCTGTCGCATCGGTTTTTCACGAGATAGTAATCTTACGAGTAAAGAGTGAATTGTGGGTTGGCGATTGATGTTCTTTTATGGTTAAAATAATTTTTTATTTCGTGTATTTTGTTGGTCCCTAAACTTTCAAACATTATGTTTTGGTTCAAGAACATTGTATTGACTATTTTGATCTTGGCTCCTTGCTATAAACATGTATTTTATTAATTTAGCTAATGAGTGGATATCCACAGAAATAAGCGTTCAAAGCTGTTTGATGTTTAGTTTTCAAATGTATTTATATGTTCTTGTTAAGTGCTTATTGAAAAATTACGGACAATTGTTTTTATCTCAAAGTTTAAGGAGCCTATGATAAAGTACAAAAAAAATTCAATCCAAGGAATATACACATAGAAGTCTATAACATGCCATCATAACTGCAAATTTGTAGATCTGGAACCACGATTTTCTCTGGGAGTCCATCAAACCTGGGGGAGGAGGGAGGCCAACAGGGGAACTCCTAGAACTGATTGAAAGAGACTTTGGTTCTTTTGAAAAGTTTTTAGAAGAATTCAAGTCCGCTGCTGCAACGCAGTTTGGTTCTGGTTGGGCTTGGCTTGCATGTAAGCCATATATTCATACTACTTTTGGTTATTTGGATTGAATTTTGAAGTGTTTAAATAGGTGTTTCTAGGTGCAAATTTTTGTAAGCACTTGAGAAAAGCAATTCAAACAAGTCATTGGTCTATTTATATGAATCAATTTTGCTTGAAATTATTCTAAGTTGGGTCTCATTTTCTGTTTTCTAGATAAGGATAACACGGTTGACCATCCACGTCCATCAGAGAAGGACAAAAAGCTTGTTATTCTAAAGAGTCCTAATGCCGTTAACCCACTTGTTTGGGACTATGCTGTGAGTACTGCATCATCTCTTTATCGCATTAACATAGAGAAAAAAGGTATTGGATGTTAAATAGAACAATATAGTATAAACAGAGGAAGCATAGTTTCAGTTTGGTTTTAATTTTGTCCTCTATAGTTCAGAAGTTTCATAATGATCTTCCCAATGGTTTTTTTAAATCTACCAAAAAAAACTTGTTATTAATAGATGCTAACGGTGTTCTTACATCTCAAAAGGGACAACGAGTTGACCTCTAATGGTACTTAACTTATTTGAAAGTTAAACGCTAGCTCACCATTCCATTTTATGCACATCAGCAACTTCTTAACTGCTAGTAGAGCCAGTGGAGACATGGATGGTTAATGTCCCGTTTGATAGCTTATGTTACTACTCCTATCTTTAAATTTCTTTGTTTTGGTATTCATTTTCAACCGTGGTTTTAAAACACCAAGTAAAATTTTGGAAAACAAGACATAATAAATATTTGTTTTCATTTTTGAAATTTGCCTATAATTCAAAGTTTATGTTTATTAAGAAATTTGAAAACTGTGGTAAGAAAATGGGAGCCCCCAAGCATAAAAACAGAAAACTAAATGCAAAATTGTTATTAACATATGGAGGAAAAGCAATTTAAACTTATTTTTACTCTTCCATGTTTTGCAGCCACTTCTTACAATCGACGTTTGGGAGGTAATTTATAATATTTACCATTTTGTTTCCTTTATTTTTCGCTTCGGGTTTCTGGGGTGGGATTTAGAGTTATGTTTGCTTTTGAGAAAAAGAGGAATGACCTTTCTTCAGTACTAATGTTGTGGTTTTTTCCCCGTTCTTTTTTCTCCTTTCCCTTGGATTTGATCTCAACAGCATGCTTATTACCTAGACTTCCAGGTTAGACTTGATCTCATGTCTTATCACTTGTATTATCTTGTTCTTCATTTTTCAATCTCCATTCTTCTGTCCTTATAACATCATTACTTGTTAAAACCGTCCTCCTTGCAGAATCGGCGACCTGATTATATATCAACTTTTGTTTCAAACCTCATATCATGGGAAGCAGCAGACTTGAGGCTACAGAAAGCCAAGATTGAAGCTGCTGAAAGAGTAAAGGAAAAAGAAAAGAAAAAGGAGAAGAAAAAGGACGAAGATAGCGACGAAGAGGTGTACGTCGACAACAGTTCAAGCGAGTCGGATTCGGATTCTGACTAACATTTGCTTCTCTCTTCTCTGGGTTACAGTCTTCATAAAGGTGCATACCATATTTTATTTCTATGCTCTAAAGTCTTGTGGTTTGTTGCTGTGATGAGTTCGTAGACTTTTGAGTCAATGGGTGTAAAGTGAGGATGAAGTGTGTAATTTTGTAGTTTGAGAACATAGGGACTCTTACTTCCACTTTATGCATTATAGAATGCTATGGTCCTTTTGGGAAAAGTATTGGATAATTACATTATATTTTTAGTGATAATAACTTAAGTATATCTTAGGTCGATATTATATTATATTCAAATGTTTATCAATAAGTAGAAACAATTTAGGTATATTCACATCTTTCAATATAATATACATGTGTTTTAAACAA

mRNA sequence

AGAATGGAACATCTATTTTAATAATATTTACATAATTTGGTTTATAGTAAAAATTAAAAAAGAAGGTAAAAACAAACTGGGCTGGGTCGAGTATACGAAGCCCAGCCCACGATGTTGGGCGTCGGCTTCTTCTTTCATAACCATTGTCCAATATGCAGGAGCAAACGCACAGGGCAAGACACGAGCAAAACGGATATGGCCGCATCTATCGCTTTGCCACCTTCCACTAAACTACACCAAAATCAACTTCACCATTCAAGCTTCCGCGGTAGCCCACTGCCACCTTCTGCCACTCCTTGTACCTCAATTAAGCAGAAACAACATGGTTCAAAGACTTATCTCACCAAAATCAGTGCGAAGTTTGAACTGAAGCCTCCTCCATATCCTCTGGATGCTTTGGAACCACATATGAGTCGTTCAACCCTTGAGTATCATTGGGGAAAACATCACAGAGCTTATGTGGACAACCTTAACAGACAGATAGAGGGAACTGAGCTGGAGGAATTATCACTAGAAGATATCATAATGAAAACATACAAAAAAGGCAATATCCTTCAGCAATTCAACAATGCAGCACAGATCTGGAACCACGATTTTCTCTGGGAGTCCATCAAACCTGGGGGAGGAGGGAGGCCAACAGGGGAACTCCTAGAACTGATTGAAAGAGACTTTGGTTCTTTTGAAAAGTTTTTAGAAGAATTCAAGTCCGCTGCTGCAACGCAGTTTGATAAGGATAACACGGTTGACCATCCACGTCCATCAGAGAAGGACAAAAAGCTTGTTATTCTAAAGAGTCCTAATGCCGTTAACCCACTTGTTTGGGACTATGCTAATCGGCGACCTGATTATATATCAACTTTTGTTTCAAACCTCATATCATGGGAAGCAGCAGACTTGAGGCTACAGAAAGCCAAGATTGAAGCTGCTGAAAGAGTAAAGGAAAAAGAAAAGAAAAAGGAGAAGAAAAAGGACGAAGATAGCGACGAAGAGGTGTACGTCGACAACAGTTCAAGCGAGTCGGATTCGGATTCTGACTAACATTTGCTTCTCTCTTCTCTGGGTTACAGTCTTCATAAAGGTGCATACCATATTTTATTTCTATGCTCTAAAGTCTTGTGGTTTGTTGCTGTGATGAGTTCGTAGACTTTTGAGTCAATGGGTGTAAAGTGAGGATGAAGTGTGTAATTTTGTAGTTTGAGAACATAGGGACTCTTACTTCCACTTTATGCATTATAGAATGCTATGGTCCTTTTGGGAAAAGTATTGGATAATTACATTATATTTTTAGTGATAATAACTTAAGTATATCTTAGGTCGATATTATATTATATTCAAATGTTTATCAATAAGTAGAAACAATTTAGGTATATTCACATCTTTCAATATAATATACATGTGTTTTAAACAA

Coding sequence (CDS)

ATGTTGGGCGTCGGCTTCTTCTTTCATAACCATTGTCCAATATGCAGGAGCAAACGCACAGGGCAAGACACGAGCAAAACGGATATGGCCGCATCTATCGCTTTGCCACCTTCCACTAAACTACACCAAAATCAACTTCACCATTCAAGCTTCCGCGGTAGCCCACTGCCACCTTCTGCCACTCCTTGTACCTCAATTAAGCAGAAACAACATGGTTCAAAGACTTATCTCACCAAAATCAGTGCGAAGTTTGAACTGAAGCCTCCTCCATATCCTCTGGATGCTTTGGAACCACATATGAGTCGTTCAACCCTTGAGTATCATTGGGGAAAACATCACAGAGCTTATGTGGACAACCTTAACAGACAGATAGAGGGAACTGAGCTGGAGGAATTATCACTAGAAGATATCATAATGAAAACATACAAAAAAGGCAATATCCTTCAGCAATTCAACAATGCAGCACAGATCTGGAACCACGATTTTCTCTGGGAGTCCATCAAACCTGGGGGAGGAGGGAGGCCAACAGGGGAACTCCTAGAACTGATTGAAAGAGACTTTGGTTCTTTTGAAAAGTTTTTAGAAGAATTCAAGTCCGCTGCTGCAACGCAGTTTGATAAGGATAACACGGTTGACCATCCACGTCCATCAGAGAAGGACAAAAAGCTTGTTATTCTAAAGAGTCCTAATGCCGTTAACCCACTTGTTTGGGACTATGCTAATCGGCGACCTGATTATATATCAACTTTTGTTTCAAACCTCATATCATGGGAAGCAGCAGACTTGAGGCTACAGAAAGCCAAGATTGAAGCTGCTGAAAGAGTAAAGGAAAAAGAAAAGAAAAAGGAGAAGAAAAAGGACGAAGATAGCGACGAAGAGGTGTACGTCGACAACAGTTCAAGCGAGTCGGATTCGGATTCTGACTAA

Protein sequence

MLGVGFFFHNHCPICRSKRTGQDTSKTDMAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKSAAATQFDKDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYANRRPDYISTFVSNLISWEAADLRLQKAKIEAAERVKEKEKKKEKKKDEDSDEEVYVDNSSSESDSDSD
Homology
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BLAST of CsGy4G004240 vs. NCBI nr
Match: KGN53188.1 (hypothetical protein Csa_4G025180 [Cucumis sativus])

HSP 1 Score: 495.7 bits (1275), Expect = 1.1e-136
Identity = 249/280 (88.93%), Postives = 252/280 (90.00%), Query Frame = 0 

Query: 18  KRTGQDTSKTDMAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYL 77
           ++T  DTSKTDMAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYL
Sbjct: 3   EQTHSDTSKTDMAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYL 62

Query: 78  TKISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDI 137
           TKISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDI
Sbjct: 63  TKISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDI 122

Query: 138 IMKTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEF 197
           IMKTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGG+PTGELLELIERDFGSFEKFLEEF
Sbjct: 123 IMKTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGGKPTGELLELIERDFGSFEKFLEEF 182

Query: 198 KSAAATQFD--------KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA--------- 257
           KSAAATQF         KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA         
Sbjct: 183 KSAAATQFGSGWAWLAYKDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYAPLLTIDVWE 242

Query: 258 --------NRRPDYISTFVSNLISWEAADLRLQKAKIEAA 273
                   NRRPDYISTFVSNLISWEAADLRLQKAKIEAA
Sbjct: 243 HAYYLDFQNRRPDYISTFVSNLISWEAADLRLQKAKIEAA 282

[Close]
BLAST of CsGy4G004240 vs. NCBI nr
Match: XP_011653103.1 (PREDICTED: superoxide dismutase [Fe], chloroplastic-like isoform X2 [Cucumis sativus])

HSP 1 Score: 484.6 bits (1246), Expect = 2.5e-133
Identity = 242/261 (92.72%), Postives = 243/261 (93.10%), Query Frame = 0 

Query: 29  MAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKP 88
           MAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKP
Sbjct: 1   MAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKP 60

Query: 89  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNIL 148
           PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNIL
Sbjct: 61  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNIL 120

Query: 149 QQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKSAAATQFD-- 208
           QQFNNAAQIWNHDFLWESIKPGGGG+PTGELLELIERDFGSFEKFLEEFKSAAATQF   
Sbjct: 121 QQFNNAAQIWNHDFLWESIKPGGGGKPTGELLELIERDFGSFEKFLEEFKSAAATQFGSG 180

Query: 209 ------KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA---------NRRPDYISTFV 268
                 KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA         NRRPDYISTFV
Sbjct: 181 WAWLAYKDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYAPLLTIDVWENRRPDYISTFV 240

Query: 269 SNLISWEAADLRLQKAKIEAA 273
           SNLISWEAADLRLQKAKIEAA
Sbjct: 241 SNLISWEAADLRLQKAKIEAA 261

[Close]
BLAST of CsGy4G004240 vs. NCBI nr
Match: XP_004146889.1 (PREDICTED: superoxide dismutase [Fe], chloroplastic-like isoform X1 [Cucumis sativus])

HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132
Identity = 242/269 (89.96%), Postives = 243/269 (90.33%), Query Frame = 0 

Query: 29  MAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKP 88
           MAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKP
Sbjct: 1   MAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKP 60

Query: 89  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNIL 148
           PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNIL
Sbjct: 61  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNIL 120

Query: 149 QQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKSAAATQFD-- 208
           QQFNNAAQIWNHDFLWESIKPGGGG+PTGELLELIERDFGSFEKFLEEFKSAAATQF   
Sbjct: 121 QQFNNAAQIWNHDFLWESIKPGGGGKPTGELLELIERDFGSFEKFLEEFKSAAATQFGSG 180

Query: 209 ------KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA-----------------NRR 268
                 KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA                 NRR
Sbjct: 181 WAWLAYKDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYAPLLTIDVWEHAYYLDFQNRR 240

Query: 269 PDYISTFVSNLISWEAADLRLQKAKIEAA 273
           PDYISTFVSNLISWEAADLRLQKAKIEAA
Sbjct: 241 PDYISTFVSNLISWEAADLRLQKAKIEAA 269

[Close]
BLAST of CsGy4G004240 vs. NCBI nr
Match: XP_016901582.1 (PREDICTED: superoxide dismutase [Fe], chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 459.5 bits (1181), Expect = 8.8e-126
Identity = 228/253 (90.12%), Postives = 231/253 (91.30%), Query Frame = 0 

Query: 29  MAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKP 88
           MAASIALPPSTKLHQN  HHSSFRGSPLPPSA PC+SIKQKQHGSKTYLTKISAKFELKP
Sbjct: 1   MAASIALPPSTKLHQNHFHHSSFRGSPLPPSAFPCSSIKQKQHGSKTYLTKISAKFELKP 60

Query: 89  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNIL 148
           PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDII KTYKKGNIL
Sbjct: 61  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIITKTYKKGNIL 120

Query: 149 QQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKSAAATQFD-- 208
           QQFNNAAQIWNHDFLWES+KPGGGG+PTGELLELIERDFGSFEKFLEEFKSAAATQF   
Sbjct: 121 QQFNNAAQIWNHDFLWESMKPGGGGKPTGELLELIERDFGSFEKFLEEFKSAAATQFGSG 180

Query: 209 ------KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA---------NRRPDYISTFV 265
                 KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA         NRRPDYISTFV
Sbjct: 181 WAWLAYKDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYAPLLTIDVWENRRPDYISTFV 240

[Close]
BLAST of CsGy4G004240 vs. NCBI nr
Match: XP_008453838.1 (PREDICTED: superoxide dismutase [Fe], chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 456.4 bits (1173), Expect = 7.4e-125
Identity = 228/261 (87.36%), Postives = 231/261 (88.51%), Query Frame = 0 

Query: 29  MAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKP 88
           MAASIALPPSTKLHQN  HHSSFRGSPLPPSA PC+SIKQKQHGSKTYLTKISAKFELKP
Sbjct: 1   MAASIALPPSTKLHQNHFHHSSFRGSPLPPSAFPCSSIKQKQHGSKTYLTKISAKFELKP 60

Query: 89  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNIL 148
           PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDII KTYKKGNIL
Sbjct: 61  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIITKTYKKGNIL 120

Query: 149 QQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKSAAATQFD-- 208
           QQFNNAAQIWNHDFLWES+KPGGGG+PTGELLELIERDFGSFEKFLEEFKSAAATQF   
Sbjct: 121 QQFNNAAQIWNHDFLWESMKPGGGGKPTGELLELIERDFGSFEKFLEEFKSAAATQFGSG 180

Query: 209 ------KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA-----------------NRR 265
                 KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA                 NRR
Sbjct: 181 WAWLAYKDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYAPLLTIDVWEHAYYLDFQNRR 240

[Close]
BLAST of CsGy4G004240 vs. TAIR10
Match: AT5G51100.1 (Fe superoxide dismutase 2)

HSP 1 Score: 278.1 bits (710), Expect = 6.6e-75
Identity = 144/256 (56.25%), Postives = 178/256 (69.53%), Query Frame = 0 

Query: 49  SSFRGSP-LPPSATPCTSIKQKQHGSKTYLTK------ISAKFELKPPPYPLDALEPHMS 108
           SS   SP L PS  P   ++ K++G +   TK      I+A FELKPPPYPLDALEPHMS
Sbjct: 11  SSLLYSPLLLPSQGPNRRMQWKRNGKRRLGTKVAVSGVITAGFELKPPPYPLDALEPHMS 70

Query: 109 RSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNILQQFNNAAQIWNHD 168
           R TL+YHWGKHH+ YV+NLN+QI GT+L+ LSLE++++ +Y KGN+L  FNNAAQ WNH+
Sbjct: 71  RETLDYHWGKHHKTYVENLNKQILGTDLDALSLEEVVLLSYNKGNMLPAFNNAAQAWNHE 130

Query: 169 FLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKSAAATQFD--------KDNTVD- 228
           F WESI+PGGGG+PTGELL LIERDFGSFE+FLE FKSAAA+ F         K N +D 
Sbjct: 131 FFWESIQPGGGGKPTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYKANRLDV 190

Query: 229 ----HPRPSEKDKKLVILKSPNAVNPLVWDYA-----------------NRRPDYISTFV 268
               +P P E+DKKLVI+K+PNAVNPLVWDY+                 NRR +YI+TF+
Sbjct: 191 ANAVNPLPKEEDKKLVIVKTPNAVNPLVWDYSPLLTIDTWEHAYYLDFENRRAEYINTFM 250

[Close]
BLAST of CsGy4G004240 vs. TAIR10
Match: AT4G25100.1 (Fe superoxide dismutase 1)

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-64
Identity = 120/210 (57.14%), Postives = 149/210 (70.95%), Query Frame = 0 

Query: 80  ISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIM 139
           ++A + LKPPP+ LDALEPHMS+ TLE+HWGKHHRAYVDNL +Q+ GTELE   LE II 
Sbjct: 7   VTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEHIIH 66

Query: 140 KTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKS 199
            TY  G++L  FNNAAQ WNH+F WES+KPGGGG+P+GELL L+ERDF S+EKF EEF +
Sbjct: 67  STYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFNA 126

Query: 200 AAATQFDKDNTVDHPRPSEKDKKLVILKSPNAVNPL-----------VW------DYANR 259
           AAATQF           +  ++KL ++K+PNAVNPL           VW      D+ NR
Sbjct: 127 AAATQFG----AGWAWLAYSNEKLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNR 186

Query: 260 RPDYISTFVSNLISWEAADLRLQKAKIEAA 273
           RPDYI TF++NL+SWEA   RL+ AK  +A
Sbjct: 187 RPDYIKTFMTNLVSWEAVSARLEAAKAASA 212

[Close]
BLAST of CsGy4G004240 vs. TAIR10
Match: AT5G23310.1 (Fe superoxide dismutase 3)

HSP 1 Score: 199.1 bits (505), Expect = 3.9e-51
Identity = 100/208 (48.08%), Postives = 136/208 (65.38%), Query Frame = 0 

Query: 79  KISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQI-EGTELEELSLEDI 138
           K+ A + LK PPYPLDALEP+MSR TLE HWGKHHR YVDNLN+Q+ +   L   ++E++
Sbjct: 45  KVEAYYGLKTPPYPLDALEPYMSRRTLEVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEEL 104

Query: 139 IMKTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEF 198
           I  TY  GN L +FNNAAQ++NHDF WES++PGGG  P   +LE I++DFGSF  F E+F
Sbjct: 105 IKATYNNGNPLPEFNNAAQVYNHDFFWESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKF 164

Query: 199 KSAAATQFDKDNTVDHPRPSEKDKKLVILKSPNAVNPLVW-----------------DYA 258
            +AA TQF             ++++L ++K+ NA+NPLVW                 DY 
Sbjct: 165 TNAALTQFGSGWV--WLVLKREERRLEVVKTSNAINPLVWDDIPIICVDVWEHSYYLDYK 224

Query: 259 NRRPDYISTFVSNLISWEAADLRLQKAK 269
           N R  YI+TF+++L+SW AA  R+ +A+
Sbjct: 225 NDRAKYINTFLNHLVSWNAAMSRMARAE 250

[Close]
BLAST of CsGy4G004240 vs. TAIR10
Match: AT3G56350.1 (Iron/manganese superoxide dismutase family protein)

HSP 1 Score: 59.3 bits (142), Expect = 4.8e-09
Identity = 35/116 (30.17%), Postives = 53/116 (45.69%), Query Frame = 0 

Query: 90  PYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNILQ 149
           PY  DALEP +S   +  H  KHH+ YV   N+ +        ++ D    +  K   L 
Sbjct: 42  PYAYDALEPAISEEIMRLHHQKHHQTYVTQYNKALNSL---RSAMADGDHSSVVKLQSLI 101

Query: 150 QFNNAAQIWNHDFLWESIKP---GGGGRPTGELLELIERDFGSFEKFLEEFKSAAA 203
           +FN    + NH   W+++ P   GGG  P   L   I+  FGS E  +++  +  A
Sbjct: 102 KFNGGGHV-NHAIFWKNLAPVHEGGGKPPHDPLASAIDAHFGSLEGLIQKMNAEGA 153

[Close]
BLAST of CsGy4G004240 vs. Swiss-Prot
Match: sp|Q9LU64|SODF2_ARATH (Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD2 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.2e-73
Identity = 144/256 (56.25%), Postives = 178/256 (69.53%), Query Frame = 0 

Query: 49  SSFRGSP-LPPSATPCTSIKQKQHGSKTYLTK------ISAKFELKPPPYPLDALEPHMS 108
           SS   SP L PS  P   ++ K++G +   TK      I+A FELKPPPYPLDALEPHMS
Sbjct: 11  SSLLYSPLLLPSQGPNRRMQWKRNGKRRLGTKVAVSGVITAGFELKPPPYPLDALEPHMS 70

Query: 109 RSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNILQQFNNAAQIWNHD 168
           R TL+YHWGKHH+ YV+NLN+QI GT+L+ LSLE++++ +Y KGN+L  FNNAAQ WNH+
Sbjct: 71  RETLDYHWGKHHKTYVENLNKQILGTDLDALSLEEVVLLSYNKGNMLPAFNNAAQAWNHE 130

Query: 169 FLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKSAAATQFD--------KDNTVD- 228
           F WESI+PGGGG+PTGELL LIERDFGSFE+FLE FKSAAA+ F         K N +D 
Sbjct: 131 FFWESIQPGGGGKPTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYKANRLDV 190

Query: 229 ----HPRPSEKDKKLVILKSPNAVNPLVWDYA-----------------NRRPDYISTFV 268
               +P P E+DKKLVI+K+PNAVNPLVWDY+                 NRR +YI+TF+
Sbjct: 191 ANAVNPLPKEEDKKLVIVKTPNAVNPLVWDYSPLLTIDTWEHAYYLDFENRRAEYINTFM 250

[Close]
BLAST of CsGy4G004240 vs. Swiss-Prot
Match: sp|P28759|SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max OX=3847 GN=SODB PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 7.2e-71
Identity = 131/222 (59.01%), Postives = 160/222 (72.07%), Query Frame = 0 

Query: 79  KISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDII 138
           K++AKFELKPPPYPL+ LEP MS+ TLE+HWGKHH+ YV+NL +Q+ GTEL+  SLE+II
Sbjct: 22  KVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTELDGKSLEEII 81

Query: 139 MKTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFK 198
           + +Y KG+IL  FNNAAQ+WNHDF WE +KPGGGG+P+GELLELIERDFGSF KFL+EFK
Sbjct: 82  VTSYNKGDILPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFVKFLDEFK 141

Query: 199 SAAATQ--------------FDKDNTVDHPRPSEKDKKLVILKSPNAVNPLVW------- 258
           +AAATQ              FD +N  + P P E D KLV+LKSPNAVNPLVW       
Sbjct: 142 AAAATQFGSGWAWLAYRARKFDGENVANPPSPDE-DNKLVVLKSPNAVNPLVWGGYYPLL 201

Query: 259 -----------DYANRRPDYISTFVSNLISWEAADLRLQKAK 269
                      D+ NRRPDYIS F+  L+SW+A   RL++AK
Sbjct: 202 TIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAK 242

[Close]
BLAST of CsGy4G004240 vs. Swiss-Prot
Match: sp|P22302|SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia OX=4092 GN=SODB PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.0e-64
Identity = 122/202 (60.40%), Postives = 145/202 (71.78%), Query Frame = 0 

Query: 83  KFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTY 142
           KFEL+PPPYP+DALEPHMS  T E+HWGKHHRAYVDNLN+QI+GTEL+  +LEDII+ TY
Sbjct: 1   KFELQPPPYPMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQIDGTELDGKTLEDIILVTY 60

Query: 143 KKGNILQQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKSAAA 202
            KG  L  FNNAAQ WNH F WES+KP GGG P+GELLELI RDFGS++ F++EFK+AAA
Sbjct: 61  NKGAPLPAFNNAAQAWNHQFFWESMKPNGGGEPSGELLELINRDFGSYDAFVKEFKAAAA 120

Query: 203 TQFDKDNTVDHPRPSEKDKKLVILKSPNAVNPL-----------VW------DYANRRPD 262
           TQF         +P E  KKL ++K+PNA NPL           VW      D+ NRRPD
Sbjct: 121 TQFGSGWAWLAYKPEE--KKLALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQNRRPD 180

Query: 263 YISTFVSNLISWEAADLRLQKA 268
           YIS F+  L+SWEA   RL+ A
Sbjct: 181 YISIFMEKLVSWEAVSSRLKAA 200

[Close]
BLAST of CsGy4G004240 vs. Swiss-Prot
Match: sp|P21276|SODF1_ARATH (Superoxide dismutase [Fe] 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD1 PE=1 SV=4)

HSP 1 Score: 244.2 bits (622), Expect = 1.9e-63
Identity = 120/210 (57.14%), Postives = 149/210 (70.95%), Query Frame = 0 

Query: 80  ISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIM 139
           ++A + LKPPP+ LDALEPHMS+ TLE+HWGKHHRAYVDNL +Q+ GTELE   LE II 
Sbjct: 7   VTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEHIIH 66

Query: 140 KTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKS 199
            TY  G++L  FNNAAQ WNH+F WES+KPGGGG+P+GELL L+ERDF S+EKF EEF +
Sbjct: 67  STYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFNA 126

Query: 200 AAATQFDKDNTVDHPRPSEKDKKLVILKSPNAVNPL-----------VW------DYANR 259
           AAATQF           +  ++KL ++K+PNAVNPL           VW      D+ NR
Sbjct: 127 AAATQFG----AGWAWLAYSNEKLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNR 186

Query: 260 RPDYISTFVSNLISWEAADLRLQKAKIEAA 273
           RPDYI TF++NL+SWEA   RL+ AK  +A
Sbjct: 187 RPDYIKTFMTNLVSWEAVSARLEAAKAASA 212

[Close]
BLAST of CsGy4G004240 vs. Swiss-Prot
Match: sp|Q9FMX0|SODF3_ARATH (Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD3 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.0e-50
Identity = 100/208 (48.08%), Postives = 136/208 (65.38%), Query Frame = 0 

Query: 79  KISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQI-EGTELEELSLEDI 138
           K+ A + LK PPYPLDALEP+MSR TLE HWGKHHR YVDNLN+Q+ +   L   ++E++
Sbjct: 45  KVEAYYGLKTPPYPLDALEPYMSRRTLEVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEEL 104

Query: 139 IMKTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEF 198
           I  TY  GN L +FNNAAQ++NHDF WES++PGGG  P   +LE I++DFGSF  F E+F
Sbjct: 105 IKATYNNGNPLPEFNNAAQVYNHDFFWESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKF 164

Query: 199 KSAAATQFDKDNTVDHPRPSEKDKKLVILKSPNAVNPLVW-----------------DYA 258
            +AA TQF             ++++L ++K+ NA+NPLVW                 DY 
Sbjct: 165 TNAALTQFGSGWV--WLVLKREERRLEVVKTSNAINPLVWDDIPIICVDVWEHSYYLDYK 224

Query: 259 NRRPDYISTFVSNLISWEAADLRLQKAK 269
           N R  YI+TF+++L+SW AA  R+ +A+
Sbjct: 225 NDRAKYINTFLNHLVSWNAAMSRMARAE 250

[Close]
BLAST of CsGy4G004240 vs. TrEMBL
Match: tr|A0A0A0KUG0|A0A0A0KUG0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025180 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 7.3e-137
Identity = 249/280 (88.93%), Postives = 252/280 (90.00%), Query Frame = 0 

Query: 18  KRTGQDTSKTDMAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYL 77
           ++T  DTSKTDMAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYL
Sbjct: 3   EQTHSDTSKTDMAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYL 62

Query: 78  TKISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDI 137
           TKISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDI
Sbjct: 63  TKISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDI 122

Query: 138 IMKTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEF 197
           IMKTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGG+PTGELLELIERDFGSFEKFLEEF
Sbjct: 123 IMKTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGGKPTGELLELIERDFGSFEKFLEEF 182

Query: 198 KSAAATQFD--------KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA--------- 257
           KSAAATQF         KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA         
Sbjct: 183 KSAAATQFGSGWAWLAYKDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYAPLLTIDVWE 242

Query: 258 --------NRRPDYISTFVSNLISWEAADLRLQKAKIEAA 273
                   NRRPDYISTFVSNLISWEAADLRLQKAKIEAA
Sbjct: 243 HAYYLDFQNRRPDYISTFVSNLISWEAADLRLQKAKIEAA 282

[Close]
BLAST of CsGy4G004240 vs. TrEMBL
Match: tr|A0A1S4E016|A0A1S4E016_CUCME (superoxide dismutase [Fe], chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494442 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 5.8e-126
Identity = 228/253 (90.12%), Postives = 231/253 (91.30%), Query Frame = 0 

Query: 29  MAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKP 88
           MAASIALPPSTKLHQN  HHSSFRGSPLPPSA PC+SIKQKQHGSKTYLTKISAKFELKP
Sbjct: 1   MAASIALPPSTKLHQNHFHHSSFRGSPLPPSAFPCSSIKQKQHGSKTYLTKISAKFELKP 60

Query: 89  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNIL 148
           PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDII KTYKKGNIL
Sbjct: 61  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIITKTYKKGNIL 120

Query: 149 QQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKSAAATQFD-- 208
           QQFNNAAQIWNHDFLWES+KPGGGG+PTGELLELIERDFGSFEKFLEEFKSAAATQF   
Sbjct: 121 QQFNNAAQIWNHDFLWESMKPGGGGKPTGELLELIERDFGSFEKFLEEFKSAAATQFGSG 180

Query: 209 ------KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA---------NRRPDYISTFV 265
                 KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA         NRRPDYISTFV
Sbjct: 181 WAWLAYKDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYAPLLTIDVWENRRPDYISTFV 240

[Close]
BLAST of CsGy4G004240 vs. TrEMBL
Match: tr|A0A1S3BY07|A0A1S3BY07_CUCME (superoxide dismutase [Fe], chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494442 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 4.9e-125
Identity = 228/261 (87.36%), Postives = 231/261 (88.51%), Query Frame = 0 

Query: 29  MAASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKP 88
           MAASIALPPSTKLHQN  HHSSFRGSPLPPSA PC+SIKQKQHGSKTYLTKISAKFELKP
Sbjct: 1   MAASIALPPSTKLHQNHFHHSSFRGSPLPPSAFPCSSIKQKQHGSKTYLTKISAKFELKP 60

Query: 89  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNIL 148
           PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDII KTYKKGNIL
Sbjct: 61  PPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIITKTYKKGNIL 120

Query: 149 QQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKSAAATQFD-- 208
           QQFNNAAQIWNHDFLWES+KPGGGG+PTGELLELIERDFGSFEKFLEEFKSAAATQF   
Sbjct: 121 QQFNNAAQIWNHDFLWESMKPGGGGKPTGELLELIERDFGSFEKFLEEFKSAAATQFGSG 180

Query: 209 ------KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA-----------------NRR 265
                 KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA                 NRR
Sbjct: 181 WAWLAYKDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYAPLLTIDVWEHAYYLDFQNRR 240

[Close]
BLAST of CsGy4G004240 vs. TrEMBL
Match: tr|A0A1L5JHX0|A0A1L5JHX0_LUFAE (Superoxide dismutase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 3.1e-111
Identity = 207/259 (79.92%), Postives = 218/259 (84.17%), Query Frame = 0 

Query: 31  ASIALPPSTKLHQNQLHHSSFRGSPLPPSATPCTSIKQKQHGSKTYLTKISAKFELKPPP 90
           ASIALPPSTKL QN L HSSF GSPLPPSA   +S KQKQH SKT LTKI+AKF+LKPPP
Sbjct: 2   ASIALPPSTKLQQNHLRHSSFCGSPLPPSAISLSSNKQKQHVSKTCLTKITAKFDLKPPP 61

Query: 91  YPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIMKTYKKGNILQQ 150
           YPLDALEPHMSRSTLEYHWGKHHRAYVDNLN+QIEGTEL+ELSLEDII KTY KG+I  Q
Sbjct: 62  YPLDALEPHMSRSTLEYHWGKHHRAYVDNLNKQIEGTELDELSLEDIIRKTYNKGDIHPQ 121

Query: 151 FNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKSAAATQFD---- 210
           FNNAAQIWNHDFLWESIKPGGGG+PTGELLELIERDFGSFE+FLEEFKSAAATQF     
Sbjct: 122 FNNAAQIWNHDFLWESIKPGGGGKPTGELLELIERDFGSFEQFLEEFKSAAATQFGSGWA 181

Query: 211 ----KDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYA-----------------NRRPD 265
               KDNT+DHPRPSEKD+KLVILKSPNAVNPLVW YA                 NRRPD
Sbjct: 182 WLAYKDNTIDHPRPSEKDRKLVILKSPNAVNPLVWKYAPLLTIDVWEHAYYIDFQNRRPD 241

[Close]
BLAST of CsGy4G004240 vs. TrEMBL
Match: tr|A0A1R3JIZ6|A0A1R3JIZ6_COCAP (Superoxide dismutase OS=Corchorus capsularis OX=210143 GN=CCACVL1_05822 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 143/201 (71.14%), Postives = 163/201 (81.09%), Query Frame = 0 

Query: 80  ISAKFELKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIIM 139
           I+A FELKPPPY L+ALEPHMSR TLEYHWGKHHRAYVDNLN+QI GT LE LSLED I+
Sbjct: 16  ITATFELKPPPYSLNALEPHMSRETLEYHWGKHHRAYVDNLNKQIVGTGLEGLSLEDTII 75

Query: 140 KTYKKGNILQQFNNAAQIWNHDFLWESIKPGGGGRPTGELLELIERDFGSFEKFLEEFKS 199
            TY KG++L  FNNAAQ WNH+F WESIKPGGGG+P+GELL+LIERDFGSFE+F++EFKS
Sbjct: 76  VTYNKGDMLPAFNNAAQAWNHEFFWESIKPGGGGKPSGELLDLIERDFGSFEQFIQEFKS 135

Query: 200 AAATQ--------------FDKDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYANRRPD 259
           AAATQ              FD +N V +P PS+KDKKLVI+KSPNAVNPLVWDY NRRPD
Sbjct: 136 AAATQFGSGWAWLAYKANRFDVENAV-NPWPSDKDKKLVIVKSPNAVNPLVWDYFNRRPD 195

Query: 260 YISTFVSNLISWEAADLRLQK 267
           YIS F+  L+SWEA   RL+K
Sbjct: 196 YISMFMEKLVSWEAVSARLEK 215

The following BLAST results are available for this feature:
BLAST of CsGy4G004240 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53188.11.1e-13688.93hypothetical protein Csa_4G025180 [Cucumis sativus][more]
XP_011653103.12.5e-13392.72PREDICTED: superoxide dismutase [Fe], chloroplastic-like isoform X2 [Cucumis sat... [more]
XP_004146889.12.2e-13289.96PREDICTED: superoxide dismutase [Fe], chloroplastic-like isoform X1 [Cucumis sat... [more]
XP_016901582.18.8e-12690.12PREDICTED: superoxide dismutase [Fe], chloroplastic-like isoform X2 [Cucumis mel... [more]
XP_008453838.17.4e-12587.36PREDICTED: superoxide dismutase [Fe], chloroplastic-like isoform X1 [Cucumis mel... [more]
BLAST of CsGy4G004240 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51100.16.6e-7556.25Fe superoxide dismutase 2[more]
AT4G25100.11.1e-6457.14Fe superoxide dismutase 1[more]
AT5G23310.13.9e-5148.08Fe superoxide dismutase 3[more]
AT3G56350.14.8e-0930.17Iron/manganese superoxide dismutase family protein[more]
BLAST of CsGy4G004240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LU64|SODF2_ARATH1.2e-7356.25Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FS... [more]
sp|P28759|SODF_SOYBN7.2e-7159.01Superoxide dismutase [Fe], chloroplastic OS=Glycine max OX=3847 GN=SODB PE=2 SV=... [more]
sp|P22302|SODF_NICPL5.0e-6460.40Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia... [more]
sp|P21276|SODF1_ARATH1.9e-6357.14Superoxide dismutase [Fe] 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FS... [more]
sp|Q9FMX0|SODF3_ARATH7.0e-5048.08Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FS... [more]
BLAST of CsGy4G004240 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KUG0|A0A0A0KUG0_CUCSA7.3e-13788.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025180 PE=4 SV=1[more]
tr|A0A1S4E016|A0A1S4E016_CUCME5.8e-12690.12superoxide dismutase [Fe], chloroplastic-like isoform X2 OS=Cucumis melo OX=3656... [more]
tr|A0A1S3BY07|A0A1S3BY07_CUCME4.9e-12587.36superoxide dismutase [Fe], chloroplastic-like isoform X1 OS=Cucumis melo OX=3656... [more]
tr|A0A1L5JHX0|A0A1L5JHX0_LUFAE3.1e-11179.92Superoxide dismutase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1[more]
tr|A0A1R3JIZ6|A0A1R3JIZ6_COCAP1.5e-7671.14Superoxide dismutase OS=Corchorus capsularis OX=210143 GN=CCACVL1_05822 PE=3 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004784superoxide dismutase activity
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006801superoxide metabolic process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR019832Mn/Fe_SOD_C
IPR036314SOD_C_sf
IPR019831Mn/Fe_SOD_N
IPR036324Mn/Fe_SOD_N_sf
IPR001189Mn/Fe_SOD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0006801 superoxide metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004784 superoxide dismutase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G004240.1CsGy4G004240.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 117..137
NoneNo IPR availableCOILSCoilCoilcoord: 262..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..308
NoneNo IPR availablePANTHERPTHR42769FAMILY NOT NAMEDcoord: 78..268
NoneNo IPR availablePANTHERPTHR42769:SF8SUPEROXIDE DISMUTASE FE 1, CHLOROPLASTICcoord: 78..268
IPR001189Manganese/iron superoxide dismutasePRINTSPR01703MNSODISMTASEcoord: 108..121
score: 61.55
coord: 87..98
score: 53.68
coord: 151..164
score: 43.28
IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilyGENE3DG3DSA:1.10.287.990coord: 102..167
e-value: 4.5E-21
score: 77.3
IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilySUPERFAMILYSSF46609Fe,Mn superoxide dismutase (SOD), N-terminal domaincoord: 82..169
IPR019831Manganese/iron superoxide dismutase, N-terminalPFAMPF00081Sod_Fe_Ncoord: 83..167
e-value: 3.7E-27
score: 94.5
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyGENE3DG3DSA:2.40.500.20coord: 173..287
e-value: 3.1E-16
score: 61.0
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilySUPERFAMILYSSF54719Fe,Mn superoxide dismutase (SOD), C-terminal domaincoord: 170..267
IPR019832Manganese/iron superoxide dismutase, C-terminalPFAMPF02777Sod_Fe_Ccoord: 175..261
e-value: 1.6E-8
score: 34.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G004240Cla010691Watermelon (97103) v1cgybwmB290
CsGy4G004240Csa4G025180Cucumber (Chinese Long) v2cgybcuB165
CsGy4G004240MELO3C017624Melon (DHL92) v3.5.1cgybmeB269
CsGy4G004240ClCG07G017220Watermelon (Charleston Gray)cgybwcgB297
CsGy4G004240CSPI04G04330Wild cucumber (PI 183967)cgybcpiB168
CsGy4G004240CmaCh04G003750Cucurbita maxima (Rimu)cgybcmaB542
CsGy4G004240CmoCh04G003970Cucurbita moschata (Rifu)cgybcmoB516
CsGy4G004240Lsi07G001390Bottle gourd (USVL1VR-Ls)cgyblsiB277
CsGy4G004240Cp4.1LG01g03240Cucurbita pepo (Zucchini)cgybcpeB503
CsGy4G004240MELO3C017624.2Melon (DHL92) v3.6.1cgybmedB266
CsGy4G004240CsaV3_4G004420Cucumber (Chinese Long) v3cgybcucB171
CsGy4G004240Cla97C07G144240Watermelon (97103) v2cgybwmbB298
CsGy4G004240Bhi01G001984Wax gourdcgybwgoB361
CsGy4G004240Carg08050Silver-seed gourdcarcgybB0382
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G004240Cucumber (Gy14) v2cgybcgybB126
CsGy4G004240Cucurbita maxima (Rimu)cgybcmaB493
CsGy4G004240Cucurbita moschata (Rifu)cgybcmoB464
CsGy4G004240Cucurbita moschata (Rifu)cgybcmoB497
CsGy4G004240Cucurbita pepo (Zucchini)cgybcpeB484
CsGy4G004240Cucumber (Chinese Long) v2cgybcuB181
CsGy4G004240Bottle gourd (USVL1VR-Ls)cgyblsiB230
CsGy4G004240Watermelon (Charleston Gray)cgybwcgB266
CsGy4G004240Wild cucumber (PI 183967)cgybcpiB184
CsGy4G004240Silver-seed gourdcarcgybB0708
CsGy4G004240Silver-seed gourdcarcgybB0860
CsGy4G004240Cucumber (Chinese Long) v3cgybcucB184
CsGy4G004240Watermelon (97103) v2cgybwmbB254
CsGy4G004240Watermelon (97103) v2cgybwmbB255