CsGy4G003990 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G003990
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Transcription factor GAMYB
Location	Chr4 : 2533606 .. 2535278 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAGAATGTAATATTAAATAAACCACGAGAAGGATACAAGAGTAATTACTCGAATTTGAAACCCAAAACTCAAGCGGGCGGGGAAATGCATCTTTACCACTAACCGTCAAAACCGCTACTAATGTAAAGTGGGGAAGAGACATAATCCAATGTTCCCCCCAACGCACAGAAACGAAACACAATAACATCTCATCCACTCGTCAAAATCTCATGAAGAATCTAACGGCTAACCTTCTAAGACTTCCATGGAGTAAACCACAGAGAAGCAGAGGCAAAAATAAGAAAAAAGAAAAGAAAGTTTCCAATATGACACTGTCCTACACTTAGAAGAAGAGAGTTGCAGAGAAGAGAAGAGAAAAATTGTGTTTGGAAATGGAAAGACAAAAAGGGATTGTTATGAAGAAAGGGCCATGGACGGCTGAAGAAGATGAGATTCTGATCAACTATGTCAATAAGTTTGGTCCAAGAGACTGGAGCTCCCTTCGATCCAAAGGTCTTCTTCCCCGGACTGGAAAATCCTGCCGGCTACGTTGGGTTAATCGACTTCAACCCAACTTGAAGACGTAAGTAATAAGATTTGAATTTTAGAGTGTATTTGGATTGACTTCCTAAGAGCACATATAGTGTTTATGAACACTTGAGAAAATTGTTCGAACGTGCTCTCAGTTGTTCCCTTAGTTTCCTGTTCTTGTACTAATTGTAAGGTTTTGGTTCTCTTTATAAGTAGTGATGTAAAGAATATGCATATTTGTGCAGAGGATGCAAATTTACAGCAGATGAAGAGAGGGTGGTGATTGAATTACAGGCACAATTTGGGAACAAATGGGCGAAAATCGCAACGTATTTGGAGGGAAGGACAGATAATGATGTGAAGAATTTTTGGAGCACACGAAGGAAGAGATTGGAAAAGATTTTGCAAACCCCACCACAGAAATCTCAGAAAAATAAACAGAGGAGTTTAGAGTCTCAAAGACTCCATGAAATGCCTGTCTTAGAGGTAAAATAGTTTTCTATTTAAGTTAAATGGAAGATAATTGGTTTCTTAAGTTAATAGTTACCAACTTACAACTTCTTGTAGATGTCCAACCTTCGTCTGTAATGAAGATTAGACTATCATTTTGGTGATTTTTTGGTAGTATGGCTGATGTATTTGCAGGTTCCTAGCTCCAGCTCGTCTCAGCCGGATGAACAATCATCGACCTGGAAAGATCATTTCAAGAATGCTTTCCAATTAGGAAACTCAGAGATGCACAAGATGGCGACGCTATCAGTACAGTCAAATATGCTTACAATGGAAAATGAAAATCAAATATTTGGAACTTCAACCATACACATGGTAGCACCCTTTGACCCTTTTTCTCATTGCTGTTTCTCCCAATTTGCTCAATCCTCGCAAGAGATCGGAATGTTTCCCGACTGCCATGGACTAGCACCAAACCACATTCCGTGCAATGTGCAAGACGTGTTCGAACCAGGTGAGACTTTGGAAACAAACAATTCCCTGCATTTCATGAGCAATTCAATGCCTAAAGAACAAGAGATCAAAGCAGAAAGTAGTTTAGAAGTTAAGAATGGAAACCCTTACTATACAACCCCAGATGATTGCTTTGATGATTTCACAGCTGATTTATTTGACTTCTTTGATCGATCTCCTCCTTCATTGAACTAG

mRNA sequence

ATGATTAGAATAGGATGCAAATTTACAGCAGATGAAGAGAGGGTGGTGATTGAATTACAGGCACAATTTGGGAACAAATGGGCGAAAATCGCAACGTATTTGGAGGGAAGGACAGATAATGATGTGAAGAATTTTTGGAGCACACGAAGGAAGAGATTGGAAAAGATTTTGCAAACCCCACCACAGAAATCTCAGAAAAATAAACAGAGGAGTTTAGAGTCTCAAAGACTCCATGAAATGCCTGTCTTAGAGGTTCCTAGCTCCAGCTCGTCTCAGCCGGATGAACAATCATCGACCTGGAAAGATCATTTCAAGAATGCTTTCCAATTAGGAAACTCAGAGATGCACAAGATGGCGACGCTATCAGTACAGTCAAATATGCTTACAATGGAAAATGAAAATCAAATATTTGGAACTTCAACCATACACATGGTAGCACCCTTTGACCCTTTTTCTCATTGCTGTTTCTCCCAATTTGCTCAATCCTCGCAAGAGATCGGAATGTTTCCCGACTGCCATGGACTAGCACCAAACCACATTCCGTGCAATGTGCAAGACGTGTTCGAACCAGGTGAGACTTTGGAAACAAACAATTCCCTGCATTTCATGAGCAATTCAATGCCTAAAGAACAAGAGATCAAAGCAGAAAGTAGTTTAGAAGTTAAGAATGGAAACCCTTACTATACAACCCCAGATGATTGCTTTGATGATTTCACAGCTGATTTATTTGACTTCTTTGATCGATCTCCTCCTTCATTGAACTAG

Coding sequence (CDS)

ATGATTAGAATAGGATGCAAATTTACAGCAGATGAAGAGAGGGTGGTGATTGAATTACAGGCACAATTTGGGAACAAATGGGCGAAAATCGCAACGTATTTGGAGGGAAGGACAGATAATGATGTGAAGAATTTTTGGAGCACACGAAGGAAGAGATTGGAAAAGATTTTGCAAACCCCACCACAGAAATCTCAGAAAAATAAACAGAGGAGTTTAGAGTCTCAAAGACTCCATGAAATGCCTGTCTTAGAGGTTCCTAGCTCCAGCTCGTCTCAGCCGGATGAACAATCATCGACCTGGAAAGATCATTTCAAGAATGCTTTCCAATTAGGAAACTCAGAGATGCACAAGATGGCGACGCTATCAGTACAGTCAAATATGCTTACAATGGAAAATGAAAATCAAATATTTGGAACTTCAACCATACACATGGTAGCACCCTTTGACCCTTTTTCTCATTGCTGTTTCTCCCAATTTGCTCAATCCTCGCAAGAGATCGGAATGTTTCCCGACTGCCATGGACTAGCACCAAACCACATTCCGTGCAATGTGCAAGACGTGTTCGAACCAGGTGAGACTTTGGAAACAAACAATTCCCTGCATTTCATGAGCAATTCAATGCCTAAAGAACAAGAGATCAAAGCAGAAAGTAGTTTAGAAGTTAAGAATGGAAACCCTTACTATACAACCCCAGATGATTGCTTTGATGATTTCACAGCTGATTTATTTGACTTCTTTGATCGATCTCCTCCTTCATTGAACTAG

Protein sequence

MIRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPPQKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMATLSVQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNHIPCNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFTADLFDFFDRSPPSLN

Homology

[Close]

BLAST of CsGy4G003990 vs. NCBI nr
Match: KGN53158.1 (hypothetical protein Csa_4G022940 [Cucumis sativus])

HSP 1 Score: 513.5 bits (1321), Expect = 4.2e-142
Identity = 250/253 (98.81%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 2   IRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 61
           ++ GCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP
Sbjct: 62  LKTGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 121

Query: 62  QKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMATL 121
           QKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMATL
Sbjct: 122 QKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMATL 181

Query: 122 SVQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNHIP 181
           SVQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNHIP
Sbjct: 182 SVQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNHIP 241

Query: 182 CNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFTAD 241
           CNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFTAD
Sbjct: 242 CNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFTAD 301

Query: 242 LFDFFDRSPPSLN 255
           LFDFFDRSPPSLN
Sbjct: 302 LFDFFDRSPPSLN 314

[Close]

BLAST of CsGy4G003990 vs. NCBI nr
Match: XP_022922554.1 (transcription factor DUO1-like [Cucurbita moschata])

HSP 1 Score: 427.2 bits (1097), Expect = 4.0e-116
Identity = 209/254 (82.28%), Postives = 229/254 (90.16%), Query Frame = 0


Query: 2   IRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 61
           ++ GCKF+A+EERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLE+ILQ PP
Sbjct: 62  LKTGCKFSAEEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLERILQIPP 121

Query: 62  QKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMATL 121
           QKSQKNKQRSLE Q L+E+P LEVPSSSSSQ DEQSSTWKDH +NAFQLGNSEMHK+ +L
Sbjct: 122 QKSQKNKQRSLEPQGLYELPALEVPSSSSSQLDEQSSTWKDHLENAFQLGNSEMHKIPSL 181

Query: 122 SVQSNMLTMENENQIFGTSTIHMV-APFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNHI 181
           SVQSNMLTMENENQ+FGT + HM+ APFDPFSHCC SQF  SSQEIGMFPDCHGLAPNH 
Sbjct: 182 SVQSNMLTMENENQVFGTPSTHMLAAPFDPFSHCCISQFTHSSQEIGMFPDCHGLAPNHA 241

Query: 182 PCNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFTA 241
           P N+QDVFEPGE  ETN+SL+FMS+SMPKEQE+K ES+LEVKN N Y  T DDCFDDFTA
Sbjct: 242 PFNLQDVFEPGEPSETNSSLNFMSSSMPKEQEMKGESNLEVKNENSYQATADDCFDDFTA 301

Query: 242 DLFDFFDRSPPSLN 255
           DLFDFFD+ PPSLN
Sbjct: 302 DLFDFFDQPPPSLN 315

[Close]

BLAST of CsGy4G003990 vs. NCBI nr
Match: XP_022985110.1 (transcription factor DUO1-like [Cucurbita maxima])

HSP 1 Score: 427.2 bits (1097), Expect = 4.0e-116
Identity = 209/254 (82.28%), Postives = 229/254 (90.16%), Query Frame = 0


Query: 2   IRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 61
           ++ GCKF+A+EERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLE+ILQ PP
Sbjct: 54  LKTGCKFSAEEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLERILQIPP 113

Query: 62  QKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMATL 121
           QKSQKNKQRSLE Q L+E+P LEVPSSSSSQ DEQSSTWKDH +NAFQLGNSEMHK  +L
Sbjct: 114 QKSQKNKQRSLEPQGLYELPALEVPSSSSSQLDEQSSTWKDHLENAFQLGNSEMHKTTSL 173

Query: 122 SVQSNMLTMENENQIFGTSTIHMV-APFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNHI 181
           SVQSNMLTMENENQ+FGT + HM+ APFDPFSHCC SQF  SSQEIGMFPDCHGLAPNH 
Sbjct: 174 SVQSNMLTMENENQVFGTPSTHMLAAPFDPFSHCCISQFTHSSQEIGMFPDCHGLAPNHA 233

Query: 182 PCNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFTA 241
           P N+QDVFEPGE  ETN+SL F+S+SMPKEQE+KAES+LEVKN N Y+ T DDCFDDFTA
Sbjct: 234 PFNLQDVFEPGEPSETNSSLKFISSSMPKEQEMKAESNLEVKNENSYHATADDCFDDFTA 293

Query: 242 DLFDFFDRSPPSLN 255
           DLFDFFD+ PPSLN
Sbjct: 294 DLFDFFDQPPPSLN 307

[Close]

BLAST of CsGy4G003990 vs. NCBI nr
Match: XP_022943234.1 (transcription factor MYB21-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100
Identity = 184/252 (73.02%), Postives = 216/252 (85.71%), Query Frame = 0


Query: 2   IRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 61
           ++ GC+F+ADEERVVIELQAQFGNKWAKIATYL GRTDNDVKNFWSTRRKRL +ILQTPP
Sbjct: 63  LKTGCRFSADEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSTRRKRLGRILQTPP 122

Query: 62  QKSQKNKQRSLESQRLHE-MPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMAT 121
           QKSQK+ Q+  ES+RLH  +P LEVP+S SSQ +++SSTW DHF+N F+LGN+EMHKMA+
Sbjct: 123 QKSQKHNQKISESRRLHHVLPDLEVPTSVSSQLEKRSSTWNDHFENEFELGNAEMHKMAS 182

Query: 122 LSVQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNHI 181
           LSVQSNM+ ME ENQIFGT +IHM+APFDPF HCC SQ  QSSQ IGM PDC GLAP+HI
Sbjct: 183 LSVQSNMIAMETENQIFGTPSIHMLAPFDPFPHCCISQITQSSQGIGMVPDCLGLAPHHI 242

Query: 182 PCNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFTA 241
             N+QD  EPG+T +  +SL FMS+SMPKEQ++KAESSLEV+NGNPY+ T  DCFDDF+A
Sbjct: 243 ASNLQDGLEPGQTSKIESSLQFMSSSMPKEQDMKAESSLEVENGNPYHATVVDCFDDFSA 302

Query: 242 DLFDFFDRSPPS 253
           DLFDFF + PPS
Sbjct: 303 DLFDFFYQPPPS 314

[Close]

BLAST of CsGy4G003990 vs. NCBI nr
Match: XP_022943235.1 (transcription factor MYB21-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 367.9 bits (943), Expect = 2.9e-98
Identity = 182/246 (73.98%), Postives = 211/246 (85.77%), Query Frame = 0


Query: 8   FTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPPQKSQKN 67
           F+ADEERVVIELQAQFGNKWAKIATYL GRTDNDVKNFWSTRRKRL +ILQTPPQKSQK+
Sbjct: 66  FSADEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSTRRKRLGRILQTPPQKSQKH 125

Query: 68  KQRSLESQRLHE-MPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMATLSVQSN 127
            Q+  ES+RLH  +P LEVP+S SSQ +++SSTW DHF+N F+LGN+EMHKMA+LSVQSN
Sbjct: 126 NQKISESRRLHHVLPDLEVPTSVSSQLEKRSSTWNDHFENEFELGNAEMHKMASLSVQSN 185

Query: 128 MLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNHIPCNVQD 187
           M+ ME ENQIFGT +IHM+APFDPF HCC SQ  QSSQ IGM PDC GLAP+HI  N+QD
Sbjct: 186 MIAMETENQIFGTPSIHMLAPFDPFPHCCISQITQSSQGIGMVPDCLGLAPHHIASNLQD 245

Query: 188 VFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFTADLFDFF 247
             EPG+T +  +SL FMS+SMPKEQ++KAESSLEV+NGNPY+ T  DCFDDF+ADLFDFF
Sbjct: 246 GLEPGQTSKIESSLQFMSSSMPKEQDMKAESSLEVENGNPYHATVVDCFDDFSADLFDFF 305

Query: 248 DRSPPS 253
            + PPS
Sbjct: 306 YQPPPS 311

[Close]

BLAST of CsGy4G003990 vs. TAIR10
Match: AT3G60460.1 (myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 83/260 (31.92%), Postives = 121/260 (46.54%), Query Frame = 0


Query: 2   IRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 61
           ++ GCKF+ADEER VIELQ++FGNKWA+IATYL GRTDNDVKNFWS+R+KRL +IL    
Sbjct: 61  LKNGCKFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLARILHNSS 120

Query: 62  QKSQKN-KQRSLESQRLHEMPVLEVPSSSS-----SQPDEQSSTWKDHFKNAFQLGNSEM 121
             S  +   +S  S RL    V  +  SS       +    SS+       +      E+
Sbjct: 121 DASSSSFNPKSSSSHRLKGKNVKPIRQSSQGFGLVEEEVTVSSSCSQMVPYSSDQVGDEV 180

Query: 122 HKMATLSVQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMF-PDCHG 181
            ++  L V+     +E++   FGT  +         +    SQ   + Q I  F P+   
Sbjct: 181 LRLPDLGVK-----LEHQPFAFGTDLV--------LAEYSDSQNDANQQAISPFSPESRE 240

Query: 182 LAPNHIPCNVQDVFEPGETLETNNSL---HFMSNSMPKE-QEIKAESSLEVKNGNPYYTT 241
           L          D+  P ++ E   +L    F  + +P+  + +  +   +V         
Sbjct: 241 LLARLDDPFYYDILGPADSSEPLFALPQPFFEPSPVPRRCRHVSKDEEADV--------- 295

Query: 242 PDDCFDDFTADLFDFFDRSP 251
                DDF AD+FD  D  P
Sbjct: 301 ---FLDDFPADMFDQVDPIP 295

[Close]

BLAST of CsGy4G003990 vs. TAIR10
Match: AT4G26930.1 (myb domain protein 97)

HSP 1 Score: 76.3 bits (186), Expect = 3.1e-14
Identity = 38/88 (43.18%), Postives = 59/88 (67.05%), Query Frame = 0


Query: 8   FTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEK--ILQTPPQKSQ 67
           FT +EER++I+L +Q GNKWA++A  L GRTDN++KN+W+TR KR ++  +   PP+ SQ
Sbjct: 77  FTPEEERLIIQLHSQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRFQRQGLPLYPPEYSQ 136

Query: 68  KNKQRSLESQRLHEMPVLEVPSSSSSQP 94
            N Q+ +  Q+       + P+SS + P
Sbjct: 137 NNHQQQMYPQQPSSPLPSQTPASSFTFP 164

[Close]

BLAST of CsGy4G003990 vs. TAIR10
Match: AT5G55020.1 (myb domain protein 120)

HSP 1 Score: 73.2 bits (178), Expect = 2.6e-13
Identity = 30/46 (65.22%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 8   FTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRL 54
           FT DEER++I+L AQ GNKWA++A  L GRTDN++KN+W+TR KRL
Sbjct: 84  FTGDEERLIIQLHAQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRL 129

[Close]

BLAST of CsGy4G003990 vs. TAIR10
Match: AT2G32460.1 (myb domain protein 101)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-12
Identity = 27/48 (56.25%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 8   FTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEK 56
           FT DEE+++I+L A+ GNKWA++A+ L GRTDN++KN+W+TR KR ++
Sbjct: 76  FTPDEEKIIIDLHAKLGNKWARMASQLPGRTDNEIKNYWNTRMKRRQR 123

[Close]

BLAST of CsGy4G003990 vs. TAIR10
Match: AT2G26960.1 (myb domain protein 81)

HSP 1 Score: 68.6 bits (166), Expect = 6.5e-12
Identity = 30/49 (61.22%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 8   FTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKI 57
           FT  EE+ VIEL A  GNKWA++A  L GRTDN++KNFW+TR KRL+++
Sbjct: 78  FTEKEEKRVIELHALLGNKWARMAEELPGRTDNEIKNFWNTRLKRLQRL 126

[Close]

BLAST of CsGy4G003990 vs. Swiss-Prot
Match: sp|Q0JB89|MYB58_ORYSJ (Probable transcription factor MYB58 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB58 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-22
Identity = 58/99 (58.59%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 2   IRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 61
           ++ GCKFTA+EERVVIELQAQFGNKWA+IATYL+GRTDNDVKNFWSTR+KRL ++L+ P 
Sbjct: 82  LKSGCKFTAEEERVVIELQAQFGNKWARIATYLQGRTDNDVKNFWSTRQKRLARLLRGPL 141

Query: 62  QKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQSSTW 101
             ++ NK  S +          + PSSSS   D Q++T+
Sbjct: 142 PAARPNKHNSGKG---------KAPSSSSL--DSQTATF 169

[Close]

BLAST of CsGy4G003990 vs. Swiss-Prot
Match: sp|A0A178VEK7|DUO1_ARATH (Transcription factor DUO1 OS=Arabidopsis thaliana OX=3702 GN=DUO1 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.6e-18
Identity = 83/260 (31.92%), Postives = 121/260 (46.54%), Query Frame = 0


Query: 2   IRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 61
           ++ GCKF+ADEER VIELQ++FGNKWA+IATYL GRTDNDVKNFWS+R+KRL +IL    
Sbjct: 64  LKNGCKFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLARILHNSS 123

Query: 62  QKSQKN-KQRSLESQRLHEMPVLEVPSSSS-----SQPDEQSSTWKDHFKNAFQLGNSEM 121
             S  +   +S  S RL    V  +  SS       +    SS+       +      E+
Sbjct: 124 DASSSSFNPKSSSSHRLKGKNVKPIRQSSQGFGLVEEEVTVSSSCSQMVPYSSDQVGDEV 183

Query: 122 HKMATLSVQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMF-PDCHG 181
            ++  L V+     +E++   FGT  +         +    SQ   + Q I  F P+   
Sbjct: 184 LRLPDLGVK-----LEHQPFAFGTDLV--------LAEYSDSQNDANQQAISPFSPESRE 243

Query: 182 LAPNHIPCNVQDVFEPGETLETNNSL---HFMSNSMPKE-QEIKAESSLEVKNGNPYYTT 241
           L          D+  P ++ E   +L    F  + +P+  + +  +   +V         
Sbjct: 244 LLARLDDPFYYDILGPADSSEPLFALPQPFFEPSPVPRRCRHVSKDEEADV--------- 298

Query: 242 PDDCFDDFTADLFDFFDRSP 251
                DDF AD+FD  D  P
Sbjct: 304 ---FLDDFPADMFDQVDPIP 298

[Close]

BLAST of CsGy4G003990 vs. Swiss-Prot
Match: sp|Q9S773|MYB97_ARATH (Transcription factor MYB97 OS=Arabidopsis thaliana OX=3702 GN=MYB97 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.6e-13
Identity = 38/88 (43.18%), Postives = 59/88 (67.05%), Query Frame = 0


Query: 8   FTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEK--ILQTPPQKSQ 67
           FT +EER++I+L +Q GNKWA++A  L GRTDN++KN+W+TR KR ++  +   PP+ SQ
Sbjct: 77  FTPEEERLIIQLHSQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRFQRQGLPLYPPEYSQ 136

Query: 68  KNKQRSLESQRLHEMPVLEVPSSSSSQP 94
            N Q+ +  Q+       + P+SS + P
Sbjct: 137 NNHQQQMYPQQPSSPLPSQTPASSFTFP 164

[Close]

BLAST of CsGy4G003990 vs. Swiss-Prot
Match: sp|Q94FL7|MY120_ARATH (Transcription factor MYB120 OS=Arabidopsis thaliana OX=3702 GN=MYB120 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.8e-12
Identity = 30/46 (65.22%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 8   FTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRL 54
           FT DEER++I+L AQ GNKWA++A  L GRTDN++KN+W+TR KRL
Sbjct: 84  FTGDEERLIIQLHAQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRL 129

[Close]

BLAST of CsGy4G003990 vs. Swiss-Prot
Match: sp|A2WW87|GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica OX=39946 GN=GAM1 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.1e-11
Identity = 27/48 (56.25%), Postives = 42/48 (87.50%), Query Frame = 0


Query: 8   FTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEK 56
           FTA+EER++I+L ++ GNKWA++A +L GRTDN++KN+W+TR KR ++
Sbjct: 98  FTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQR 145

[Close]

BLAST of CsGy4G003990 vs. TrEMBL
Match: tr|A0A0A0KUD2|A0A0A0KUD2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022940 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 2.8e-142
Identity = 250/253 (98.81%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 2   IRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 61
           ++ GCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP
Sbjct: 62  LKTGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 121

Query: 62  QKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMATL 121
           QKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMATL
Sbjct: 122 QKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMATL 181

Query: 122 SVQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNHIP 181
           SVQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNHIP
Sbjct: 182 SVQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNHIP 241

Query: 182 CNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFTAD 241
           CNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFTAD
Sbjct: 242 CNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFTAD 301

Query: 242 LFDFFDRSPPSLN 255
           LFDFFDRSPPSLN
Sbjct: 302 LFDFFDRSPPSLN 314

[Close]

BLAST of CsGy4G003990 vs. TrEMBL
Match: tr|A0A2N9GPA8|A0A2N9GPA8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29122 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 8.9e-48
Identity = 120/254 (47.24%), Postives = 159/254 (62.60%), Query Frame = 0


Query: 5   GCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPPQKS 64
           GCKF+A+EERVVIELQAQFGNKWAKIATYL GRTDNDVKNFWS+RRKRLE+IL+TPP K 
Sbjct: 66  GCKFSAEEERVVIELQAQFGNKWAKIATYLHGRTDNDVKNFWSSRRKRLERILRTPPAKQ 125

Query: 65  QKNKQRSLESQRLHEMPVLEVPS-SSSSQPDEQSSTWKDHFKNAFQLG---NSEMHKMAT 124
           QKNK +       HE+P+LEVP+  S+S P E+  +    FKN  Q     NSE +KM  
Sbjct: 126 QKNKGK---DPVFHELPILEVPACGSTSTPIEEEGSLS--FKNQCQPSYPENSEEYKMVA 185

Query: 125 LS--VQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPN 184
           L   V+SN+        +   +   MV PF+  S+  F Q  +  Q+I + P+CH L P+
Sbjct: 186 LPDLVRSNLQICVPSLPMLEPTP--MVPPFESSSNNPFPQLPEPQQDISLMPECHDLTPD 245

Query: 185 HIPCNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDF 244
           H   N  D+F+  ETL T + L FM++  P   +   +++ +  N NP  ++PD  FDDF
Sbjct: 246 HCDPNFLDMFKQPETLGTEHGLKFMTSMPPLGLKCNTQNAKQGGNANP--SSPDCSFDDF 305

Query: 245 TADLFDFFDRSPPS 253
             ++FDF +  P S
Sbjct: 306 PIEMFDFLEPLPSS 310

[Close]

BLAST of CsGy4G003990 vs. TrEMBL
Match: tr|A0A061G0B1|A0A061G0B1_THECC (Myb-like HTH transcriptional regulator family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_014872 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.4e-37
Identity = 103/253 (40.71%), Postives = 140/253 (55.34%), Query Frame = 0


Query: 2   IRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 61
           ++ GCKF+A+EERVVIELQAQFGNKWAKIA YL GRTDNDVKNFWS RRKRLE+IL TP 
Sbjct: 63  LKTGCKFSAEEERVVIELQAQFGNKWAKIARYLPGRTDNDVKNFWSARRKRLERILLTPT 122

Query: 62  QKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQSSTWKDHFKNAFQLGNSEMHKMATL 121
             S KNK +      LHEMP++EVP S+    ++ SS+  D  K     GN E  +M  L
Sbjct: 123 SNSHKNKGK---DPVLHEMPMVEVPPSNFIPLEQGSSSHHDQAKRPSFSGNFEEFRMVPL 182

Query: 122 S--VQSNMLTMENENQIFGTSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCHGLAPNH 181
              VQ ++  +E    I   +TI M+   +P ++   S   Q   ++     C  LAP  
Sbjct: 183 PDLVQPDLPNLETGLPILDIATIQMIPSIEPSANYPVSLQPQLQLDLPSLTQCQDLAPEP 242

Query: 182 IPCNVQDVFEPGETLETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYTTPDDCFDDFT 241
              N + +F+  E  E+++   + +          A+   +    NP    PD  FD+F 
Sbjct: 243 NGLNFEGMFKHQEASESDSKPKWFTRFPSTGMNNNAQIGKKEDRRNP--AIPDSFFDEFP 302

Query: 242 ADLFDFFDRSPPS 253
           +D+FD+ D  P S
Sbjct: 303 SDMFDYLDPLPNS 310

[Close]

BLAST of CsGy4G003990 vs. TrEMBL
Match: tr|A0A1S3BY40|A0A1S3BY40_CUCME (myb-related protein 306-like OS=Cucumis melo OX=3656 GN=LOC103494472 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.5e-36
Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 2   IRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 61
           ++ GCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLE+ILQTP 
Sbjct: 104 LKTGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLERILQTPQ 163

Query: 62  QKSQKNKQRSLESQRLHEMPVLEV 86
           QKSQKNKQRSLESQRLHEMPVLEV
Sbjct: 164 QKSQKNKQRSLESQRLHEMPVLEV 187

[Close]

BLAST of CsGy4G003990 vs. TrEMBL
Match: tr|A0A1R3JJ14|A0A1R3JJ14_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_05763 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.1e-32
Identity = 101/263 (38.40%), Postives = 140/263 (53.23%), Query Frame = 0


Query: 2   IRIGCKFTADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRRKRLEKILQTPP 61
           ++ GCKF+A+EERVVIELQAQ+GNKWAKIA++L GRTDNDVKNFWS RRKRLE+ILQTP 
Sbjct: 63  LKSGCKFSAEEERVVIELQAQYGNKWAKIASHLSGRTDNDVKNFWSARRKRLERILQTPT 122

Query: 62  QKSQKNKQRSLESQRLHEMPVLEVPSSSSSQPDEQ--SSTWKDHFKNAFQL---GNSEMH 121
            KS KNK +      LHEMP++EV  S+ + P EQ  SS+ +D  +    +   GNSE  
Sbjct: 123 SKSNKNKGK---DPVLHEMPIMEVTPSNCNVPLEQGSSSSHEDQSRKPPSISFSGNSEDF 182

Query: 122 KMATLS--VQSNMLTMENENQIFG-TSTIHMVAPFDPFSHCCFSQFAQSSQEIGMFPDCH 181
           +M  L   +  ++L +E    I      + M+ P +P            +  + + P   
Sbjct: 183 RMVPLPDLINPDLLNLETCLPILDIPQPLQMIPPVEP----------SMNYPVTLLPQLQ 242

Query: 182 -GLAPNHIPCNVQDVFEPGETL---ETNNSLHFMSNSMPKEQEIKAESSLEVKNGNPYYT 241
             LAP  I  N  D+ +  + +   E +          P     K ++ +  K       
Sbjct: 243 LDLAPEPIDINFMDMLKHQQQIVESEESKPKSLTLTRSPPSTVTKGKAQVGDKEDRRILA 302

Query: 242 TPDDCFDDFTADLFDFFDRSPPS 253
           TPD  FD+F  D+FD  +  P S
Sbjct: 303 TPDSFFDEFPTDMFDCLEPLPNS 312

The following BLAST results are available for this feature:

BLAST of CsGy4G003990 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN53158.1	4.2e-142	98.81	hypothetical protein Csa_4G022940 [Cucumis sativus]	[more]
XP_022922554.1	4.0e-116	82.28	transcription factor DUO1-like [Cucurbita moschata]	[more]
XP_022985110.1	4.0e-116	82.28	transcription factor DUO1-like [Cucurbita maxima]	[more]
XP_022943234.1	1.4e-100	73.02	transcription factor MYB21-like isoform X1 [Cucurbita moschata]	[more]
XP_022943235.1	2.9e-98	73.98	transcription factor MYB21-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CsGy4G003990 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60460.1	1.4e-19	31.92	myb-like HTH transcriptional regulator family protein	[more]
AT4G26930.1	3.1e-14	43.18	myb domain protein 97	[more]
AT5G55020.1	2.6e-13	65.22	myb domain protein 120	[more]
AT2G32460.1	1.7e-12	56.25	myb domain protein 101	[more]
AT2G26960.1	6.5e-12	61.22	myb domain protein 81	[more]

BLAST of CsGy4G003990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0JB89\|MYB58_ORYSJ	2.3e-22	58.59	Probable transcription factor MYB58 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
sp\|A0A178VEK7\|DUO1_ARATH	2.6e-18	31.92	Transcription factor DUO1 OS=Arabidopsis thaliana OX=3702 GN=DUO1 PE=1 SV=1	[more]
sp\|Q9S773\|MYB97_ARATH	5.6e-13	43.18	Transcription factor MYB97 OS=Arabidopsis thaliana OX=3702 GN=MYB97 PE=2 SV=1	[more]
sp\|Q94FL7\|MY120_ARATH	4.8e-12	65.22	Transcription factor MYB120 OS=Arabidopsis thaliana OX=3702 GN=MYB120 PE=2 SV=1	[more]
sp\|A2WW87\|GAM1_ORYSI	3.1e-11	56.25	Transcription factor GAMYB OS=Oryza sativa subsp. indica OX=39946 GN=GAM1 PE=2 S...	[more]

BLAST of CsGy4G003990 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KUD2\|A0A0A0KUD2_CUCSA	2.8e-142	98.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022940 PE=4 SV=1	[more]
tr\|A0A2N9GPA8\|A0A2N9GPA8_FAGSY	8.9e-48	47.24	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29122 PE=4 SV=1	[more]
tr\|A0A061G0B1\|A0A061G0B1_THECC	2.4e-37	40.71	Myb-like HTH transcriptional regulator family protein, putative OS=Theobroma cac...	[more]
tr\|A0A1S3BY40\|A0A1S3BY40_CUCME	3.5e-36	94.05	myb-related protein 306-like OS=Cucumis melo OX=3656 GN=LOC103494472 PE=4 SV=1	[more]
tr\|A0A1R3JJ14\|A0A1R3JJ14_COCAP	3.1e-32	38.40	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_05763 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G003990.1	CsGy4G003990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 4..52 e-value: 6.0E-11 score: 52.4
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 7..47 e-value: 1.8E-11 score: 43.9
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 7..46 e-value: 2.37924E-10 score: 53.3482
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 7..78 e-value: 1.4E-15 score: 58.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..99
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 7..249
None	No IPR available	PANTHER	PTHR10641:SF488	DUO POLLEN 1	coord: 7..249
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..54 score: 22.293
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 7..57

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G003990	Cla010722	Watermelon (97103) v1	cgybwmB290
CsGy4G003990	Csa4G022940	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G003990	CSPI04G04070	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G003990	CmaCh04G003550	Cucurbita maxima (Rimu)	cgybcmaB542
CsGy4G003990	CmaCh16G002100	Cucurbita maxima (Rimu)	cgybcmaB493
CsGy4G003990	CmoCh04G003730	Cucurbita moschata (Rifu)	cgybcmoB516
CsGy4G003990	CmoCh16G002280	Cucurbita moschata (Rifu)	cgybcmoB464
CsGy4G003990	Lsi07G001100	Bottle gourd (USVL1VR-Ls)	cgyblsiB277
CsGy4G003990	Cp4.1LG01g03550	Cucurbita pepo (Zucchini)	cgybcpeB503
CsGy4G003990	Cp4.1LG14g05310	Cucurbita pepo (Zucchini)	cgybcpeB484
CsGy4G003990	CsaV3_4G004130	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G003990	Cla97C07G143920	Watermelon (97103) v2	cgybwmbB298
CsGy4G003990	Bhi01G002035	Wax gourd	cgybwgoB355
CsGy4G003990	Carg08028	Silver-seed gourd	carcgybB0382

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G003990	Wax gourd	cgybwgoB361
CsGy4G003990	Melon (DHL92) v3.5.1	cgybmeB269
CsGy4G003990	Melon (DHL92) v3.6.1	cgybmedB266
CsGy4G003990	Watermelon (Charleston Gray)	cgybwcgB297
CsGy4G003990	Silver-seed gourd	carcgybB0860