CsGy4G003070 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G003070
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPentatricopeptide repeat superfamily protein
LocationChr4 : 1953729 .. 1955468 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTAACGATTAGGAGCTCTTCGGCGTTGCTCAAACTCCTTTCTCTTCATTTCCATGGCTCCTCCTCACACTTTTTCAGCACTTCAAAGACCACTAACCACATTGCCATAGCTCCAAGAGCTCTTGCAAGAAGACCCACTTCGCGAACTGCCCCAACTCCTCGGTCTCCGAACACCCTCGGCTCTTCCGATGTCGTCAACTCAGTATGTTCTTTACTTTCAAACAAAAATCCCCAAACACCTAATCTCGATCTTGATCATTTATTGAAAAGGTTCAAAGACAACTTAAGTTCGGATTTCGTGCTTCAAATTCTGATGAATTATAAGCTGTTAGGTCGGGCTAAAACGCTAGAATTCTTCTCTTGGTCCGGATTGCAAATGGGGTTTCGGTTTGATGCGTCCGTGGTTGAGTATATGGCTGATTTCTTAGGTAGGAGGAAATTGTTTGATGATATGAAGTGTCTTTTAGTGACTGTGTTGTCTCATAAGGGTCGGATTTCTTGTCGAACATTTTCAATTTGTATTAGATTTTTGGGTAGGCAGGGGAGGGTTAGAGAAGCACTTTGCTTGTTTGAAGAAATGGAACCAAAATTTGGGTGTAAACCTGATAATCTGGTCTTTAACAACATGCTTTATGCACTTTGTAAGAAGGAACCAACTGGGGAATTGATTGATACTGCTCTAAAGATTTTCAGAAGAATTGAATTGCCTGATAAATATTCATACAGTAATGTTATAATTGGATTGTGTAAATTTGGTAGGTATAGTACAGCTATTGAAGCGTTTGGTGAAATGTATAGGGCAGGTTTGGTACCTACTCGAACTGCTGTGAACATTCTCATTGGGAATTTGTGTTCTTTGAGTGCTAAAGAAGGGGCTGTAGAAAAAGTTAGGGTCAATAGTACTTATAGACCTTTTACCGTTCTAGTTCCAAATGTGAATCCGAAGAGCGGTGCCATTGAACCTGCAGTTGGGATTTTTTGGGCAGCTAATAAGCTGAGTTTAGTTCCCAGTTCTTTTGTAACAGTTCAGCTCATCTCAGAGCTTTGTCGGTTAGGTCAAATGCAAGAAGCAATTAGAGTATTGAAGGTTGTTGAGGGTGACAAGCTTAGATGTGCTGAAGAGTGTTATTCTGTTGTGATGAAAGCATTATGTGAACATCGTCACGTAGACGAAGCTAGTGATCTGTTTGGGAGGATGCTTTCTCAGGGCATGAAGCCAAAATTGGCTATTTACAATTATGTTATTTGCATGTTATGCAAATTAGGAAATTTGGATAGTGCTGAAAGGGTGTTTGGGATTATGAACAAGAAAAGATGTGCACCTGATCATGTTACTTATTCGGCGTTAATCCATGCCTACGGTGAAAATAGGGATTGGTCAGCTGCCTACGGTTTATTGAAAGAAATGTTGAGTTTAGGCATGTCTCCTCATTTTCATGTGTATAGTATAGTGGATAAACTAATGAGAGAACATGGGCAAATTGATCTGTGCTTGAAGCTGGAAATGAAATGGGAAGCCCAAATTTTGCAGAAGCTTTGTAAACAAGGACAACTGGAGGCTGCGTATGAAAAGATGAAGTCAATGCTTGAAAAGGGTTTGTCTCCTCCTATATATGTTAGAGATGCGTTTGAGAGTGCATTTCAAAAGAAGGGTAAGTTTAAGATTGCACGAGAGTTGCTGCAGAAGATGGACGGAGTCCACCAACATGAGTCAAGAACGAGAAATTCATCATGA

mRNA sequence

ATGTTGGTAACGATTAGGAGCTCTTCGGCGTTGCTCAAACTCCTTTCTCTTCATTTCCATGGCTCCTCCTCACACTTTTTCAGCACTTCAAAGACCACTAACCACATTGCCATAGCTCCAAGAGCTCTTGCAAGAAGACCCACTTCGCGAACTGCCCCAACTCCTCGGTCTCCGAACACCCTCGGCTCTTCCGATGTCGTCAACTCAGTATGTTCTTTACTTTCAAACAAAAATCCCCAAACACCTAATCTCGATCTTGATCATTTATTGAAAAGGTTCAAAGACAACTTAAGTTCGGATTTCGTGCTTCAAATTCTGATGAATTATAAGCTGTTAGGTCGGGCTAAAACGCTAGAATTCTTCTCTTGGTCCGGATTGCAAATGGGGTTTCGGTTTGATGCGTCCGTGGTTGAGTATATGGCTGATTTCTTAGGTAGGAGGAAATTGTTTGATGATATGAAGTGTCTTTTAGTGACTGTGTTGTCTCATAAGGGTCGGATTTCTTGTCGAACATTTTCAATTTGTATTAGATTTTTGGGTAGGCAGGGGAGGGTTAGAGAAGCACTTTGCTTGTTTGAAGAAATGGAACCAAAATTTGGGTGTAAACCTGATAATCTGGTCTTTAACAACATGCTTTATGCACTTTGTAAGAAGGAACCAACTGGGGAATTGATTGATACTGCTCTAAAGATTTTCAGAAGAATTGAATTGCCTGATAAATATTCATACAGTAATGTTATAATTGGATTGTGTAAATTTGGTAGGTATAGTACAGCTATTGAAGCGTTTGGTGAAATGTATAGGGCAGGTTTGGTACCTACTCGAACTGCTGTGAACATTCTCATTGGGAATTTGTGTTCTTTGAGTGCTAAAGAAGGGGCTGTAGAAAAAGTTAGGGTCAATAGTACTTATAGACCTTTTACCGTTCTAGTTCCAAATGTGAATCCGAAGAGCGGTGCCATTGAACCTGCAGTTGGGATTTTTTGGGCAGCTAATAAGCTGAGTTTAGTTCCCAGTTCTTTTGTAACAGTTCAGCTCATCTCAGAGCTTTGTCGGTTAGGTCAAATGCAAGAAGCAATTAGAGTATTGAAGGTTGTTGAGGGTGACAAGCTTAGATGTGCTGAAGAGTGTTATTCTGTTGTGATGAAAGCATTATGTGAACATCGTCACGTAGACGAAGCTAGTGATCTGTTTGGGAGGATGCTTTCTCAGGGCATGAAGCCAAAATTGGCTATTTACAATTATGTTATTTGCATGTTATGCAAATTAGGAAATTTGGATAGTGCTGAAAGGGTGTTTGGGATTATGAACAAGAAAAGATGTGCACCTGATCATGTTACTTATTCGGCGTTAATCCATGCCTACGGTGAAAATAGGGATTGGTCAGCTGCCTACGGTTTATTGAAAGAAATGTTGAGTTTAGGCATGTCTCCTCATTTTCATGTGTATAGTATAGTGGATAAACTAATGAGAGAACATGGGCAAATTGATCTGTGCTTGAAGCTGGAAATGAAATGGGAAGCCCAAATTTTGCAGAAGCTTTGTAAACAAGGACAACTGGAGGCTGCGTATGAAAAGATGAAGTCAATGCTTGAAAAGGGTTTGTCTCCTCCTATATATGTTAGAGATGCGTTTGAGAGTGCATTTCAAAAGAAGGGTAAGTTTAAGATTGCACGAGAGTTGCTGCAGAAGATGGACGGAGTCCACCAACATGAGTCAAGAACGAGAAATTCATCATGA

Coding sequence (CDS)

ATGTTGGTAACGATTAGGAGCTCTTCGGCGTTGCTCAAACTCCTTTCTCTTCATTTCCATGGCTCCTCCTCACACTTTTTCAGCACTTCAAAGACCACTAACCACATTGCCATAGCTCCAAGAGCTCTTGCAAGAAGACCCACTTCGCGAACTGCCCCAACTCCTCGGTCTCCGAACACCCTCGGCTCTTCCGATGTCGTCAACTCAGTATGTTCTTTACTTTCAAACAAAAATCCCCAAACACCTAATCTCGATCTTGATCATTTATTGAAAAGGTTCAAAGACAACTTAAGTTCGGATTTCGTGCTTCAAATTCTGATGAATTATAAGCTGTTAGGTCGGGCTAAAACGCTAGAATTCTTCTCTTGGTCCGGATTGCAAATGGGGTTTCGGTTTGATGCGTCCGTGGTTGAGTATATGGCTGATTTCTTAGGTAGGAGGAAATTGTTTGATGATATGAAGTGTCTTTTAGTGACTGTGTTGTCTCATAAGGGTCGGATTTCTTGTCGAACATTTTCAATTTGTATTAGATTTTTGGGTAGGCAGGGGAGGGTTAGAGAAGCACTTTGCTTGTTTGAAGAAATGGAACCAAAATTTGGGTGTAAACCTGATAATCTGGTCTTTAACAACATGCTTTATGCACTTTGTAAGAAGGAACCAACTGGGGAATTGATTGATACTGCTCTAAAGATTTTCAGAAGAATTGAATTGCCTGATAAATATTCATACAGTAATGTTATAATTGGATTGTGTAAATTTGGTAGGTATAGTACAGCTATTGAAGCGTTTGGTGAAATGTATAGGGCAGGTTTGGTACCTACTCGAACTGCTGTGAACATTCTCATTGGGAATTTGTGTTCTTTGAGTGCTAAAGAAGGGGCTGTAGAAAAAGTTAGGGTCAATAGTACTTATAGACCTTTTACCGTTCTAGTTCCAAATGTGAATCCGAAGAGCGGTGCCATTGAACCTGCAGTTGGGATTTTTTGGGCAGCTAATAAGCTGAGTTTAGTTCCCAGTTCTTTTGTAACAGTTCAGCTCATCTCAGAGCTTTGTCGGTTAGGTCAAATGCAAGAAGCAATTAGAGTATTGAAGGTTGTTGAGGGTGACAAGCTTAGATGTGCTGAAGAGTGTTATTCTGTTGTGATGAAAGCATTATGTGAACATCGTCACGTAGACGAAGCTAGTGATCTGTTTGGGAGGATGCTTTCTCAGGGCATGAAGCCAAAATTGGCTATTTACAATTATGTTATTTGCATGTTATGCAAATTAGGAAATTTGGATAGTGCTGAAAGGGTGTTTGGGATTATGAACAAGAAAAGATGTGCACCTGATCATGTTACTTATTCGGCGTTAATCCATGCCTACGGTGAAAATAGGGATTGGTCAGCTGCCTACGGTTTATTGAAAGAAATGTTGAGTTTAGGCATGTCTCCTCATTTTCATGTGTATAGTATAGTGGATAAACTAATGAGAGAACATGGGCAAATTGATCTGTGCTTGAAGCTGGAAATGAAATGGGAAGCCCAAATTTTGCAGAAGCTTTGTAAACAAGGACAACTGGAGGCTGCGTATGAAAAGATGAAGTCAATGCTTGAAAAGGGTTTGTCTCCTCCTATATATGTTAGAGATGCGTTTGAGAGTGCATTTCAAAAGAAGGGTAAGTTTAAGATTGCACGAGAGTTGCTGCAGAAGATGGACGGAGTCCACCAACATGAGTCAAGAACGAGAAATTCATCATGA

Protein sequence

MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNTLGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEFFSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLGRQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELPDKYSYSNVIIGLCKFGRYSTAIEAFGEMYRAGLVPTRTAVNILIGNLCSLSAKEGAVEKVRVNSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAIRVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAIYNYVICMLCKLGNLDSAERVFGIMNKKRCAPDHVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHFHVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIYVRDAFESAFQKKGKFKIARELLQKMDGVHQHESRTRNSS
Homology
[Close]
BLAST of CsGy4G003070 vs. NCBI nr
Match: XP_004152299.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like [Cucumis sativus])

HSP 1 Score: 939.9 bits (2428), Expect = 4.2e-270
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0 

Query: 1   MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT 60
           MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT
Sbjct: 1   MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT 60

Query: 61  LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF 120
           LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF
Sbjct: 61  LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF 120

Query: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180
           FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG
Sbjct: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180

Query: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX 240
           RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX
Sbjct: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV 300

Query: 301 NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI 360
           NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI
Sbjct: 301 NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI 360

Query: 361 RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420
           RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX
Sbjct: 361 RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF 480
           XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF 480

Query: 481 HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY 540
           HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY
Sbjct: 481 HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY 540

Query: 541 VRDAFESAFQKKGKFKIARELLQKMDGVHQHESRTRNSS 580
           VRDAFESAFQKKGKFKIARELLQKMDGVHQHESRTRNSS
Sbjct: 541 VRDAFESAFQKKGKFKIARELLQKMDGVHQHESRTRNSS 579

[Close]
BLAST of CsGy4G003070 vs. NCBI nr
Match: XP_008453994.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like isoform X1 [Cucumis melo] >XP_008453996.1 PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like isoform X1 [Cucumis melo])

HSP 1 Score: 897.9 bits (2319), Expect = 1.8e-257
Identity = 551/579 (95.16%), Postives = 561/579 (96.89%), Query Frame = 0 

Query: 1   MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT 60
           MLVTIRSSSALLKLLSLHFHG SSHFFSTSKTT HIAIAPRAL RRPTSRTAPTPRSPNT
Sbjct: 1   MLVTIRSSSALLKLLSLHFHGFSSHFFSTSKTTKHIAIAPRALTRRPTSRTAPTPRSPNT 60

Query: 61  LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF 120
           +GSSDVVNSVCSLLSNKNPQTPNLD++HLLKRFKDNLSSD VLQILMNYKLLGRAKTLEF
Sbjct: 61  VGSSDVVNSVCSLLSNKNPQTPNLDINHLLKRFKDNLSSDLVLQILMNYKLLGRAKTLEF 120

Query: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180
           FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG
Sbjct: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180

Query: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX 240
           RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIEL XX
Sbjct: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELPXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AKEGA+EKVRV
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAKEGALEKVRV 300

Query: 301 NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI 360
            STYRPFTVLVPNVNPKSGAIEPAVGIFWAANKL LVPSSFVTVQLISELCR+GQMQEAI
Sbjct: 301 RSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLGLVPSSFVTVQLISELCRVGQMQEAI 360

Query: 361 RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420
           +VLKVVE DKLRCAEECYSVVMKALCEHRH+DEASDLFGRMLSQGMKPKLAXXXXXXXXX
Sbjct: 361 KVLKVVERDKLRCAEECYSVVMKALCEHRHIDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF 480
           XXXXXXXXXXXXXXXXXXXXXXXXX     LIHAYGENR+WSAAYGLLKEMLSLGMSPHF
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIHAYGENRNWSAAYGLLKEMLSLGMSPHF 480

Query: 481 HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY 540
           HVYS+VDKLMREHGQ+DLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGL PPIY
Sbjct: 481 HVYSLVDKLMREHGQVDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLCPPIY 540

Query: 541 VRDAFESAFQKKGKFKIARELLQKMDGVHQHESRTRNSS 580
           VRDAFESAFQKKGKFKIARELLQKMDGVHQHES TRNSS
Sbjct: 541 VRDAFESAFQKKGKFKIARELLQKMDGVHQHESGTRNSS 579

[Close]
BLAST of CsGy4G003070 vs. NCBI nr
Match: KGN53058.1 (hypothetical protein Csa_4G013030 [Cucumis sativus])

HSP 1 Score: 888.3 bits (2294), Expect = 1.4e-254
Identity = 552/552 (100.00%), Postives = 552/552 (100.00%), Query Frame = 0 

Query: 1   MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT 60
           MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT
Sbjct: 1   MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT 60

Query: 61  LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF 120
           LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF
Sbjct: 61  LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF 120

Query: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180
           FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG
Sbjct: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180

Query: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX 240
           RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX
Sbjct: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV 300

Query: 301 NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI 360
           NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI
Sbjct: 301 NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI 360

Query: 361 RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420
           RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX
Sbjct: 361 RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF 480
           XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF 480

Query: 481 HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY 540
           HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY
Sbjct: 481 HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY 540

Query: 541 VRDAFESAFQKK 553
           VRDAFESAFQKK
Sbjct: 541 VRDAFESAFQKK 552

[Close]
BLAST of CsGy4G003070 vs. NCBI nr
Match: XP_008453997.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Cucumis melo])

HSP 1 Score: 793.9 bits (2049), Expect = 3.7e-226
Identity = 509/579 (87.91%), Postives = 517/579 (89.29%), Query Frame = 0 

Query: 1   MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT 60
           MLVTIRSSSALLKLLSLHFHG SSHFFSTSKTT HIAIAPRAL RRPTSRTAPTPRSPNT
Sbjct: 1   MLVTIRSSSALLKLLSLHFHGFSSHFFSTSKTTKHIAIAPRALTRRPTSRTAPTPRSPNT 60

Query: 61  LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF 120
           +GSSD                                             LLGRAKTLEF
Sbjct: 61  VGSSD---------------------------------------------LLGRAKTLEF 120

Query: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180
           FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG
Sbjct: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180

Query: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX 240
           RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIEL XX
Sbjct: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELPXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AKEGA+EKVRV
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAKEGALEKVRV 300

Query: 301 NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI 360
            STYRPFTVLVPNVNPKSGAIEPAVGIFWAANKL LVPSSFVTVQLISELCR+GQMQEAI
Sbjct: 301 RSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLGLVPSSFVTVQLISELCRVGQMQEAI 360

Query: 361 RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420
           +VLKVVE DKLRCAEECYSVVMKALCEHRH+DEASDLFGRMLSQGMKPKLAXXXXXXXXX
Sbjct: 361 KVLKVVERDKLRCAEECYSVVMKALCEHRHIDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF 480
           XXXXXXXXXXXXXXXXXXXXXXXXX     LIHAYGENR+WSAAYGLLKEMLSLGMSPHF
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIHAYGENRNWSAAYGLLKEMLSLGMSPHF 480

Query: 481 HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY 540
           HVYS+VDKLMREHGQ+DLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGL PPIY
Sbjct: 481 HVYSLVDKLMREHGQVDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLCPPIY 534

Query: 541 VRDAFESAFQKKGKFKIARELLQKMDGVHQHESRTRNSS 580
           VRDAFESAFQKKGKFKIARELLQKMDGVHQHES TRNSS
Sbjct: 541 VRDAFESAFQKKGKFKIARELLQKMDGVHQHESGTRNSS 534

[Close]
BLAST of CsGy4G003070 vs. NCBI nr
Match: XP_022955543.1 (pentatricopeptide repeat-containing protein At4g20090-like [Cucurbita moschata])

HSP 1 Score: 768.8 bits (1984), Expect = 1.3e-218
Identity = 412/576 (71.53%), Postives = 444/576 (77.08%), Query Frame = 0 

Query: 4   TIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNTLGS 63
           TIR++SA LK ++   +G SS+  STS T    AIAPRALARRPTSRTAP PR+ +T   
Sbjct: 6   TIRNASAYLKFVA---YGFSSYSSSTSSTRKRTAIAPRALARRPTSRTAPIPRALDT--- 65

Query: 64  SDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEFFSW 123
            D V+SVCSLLSNKN QT NL+LDHLLKRFK+ LSSDFVLQILMNY+L GRAKTLEFFSW
Sbjct: 66  -DAVSSVCSLLSNKNHQTTNLELDHLLKRFKETLSSDFVLQILMNYRLFGRAKTLEFFSW 125

Query: 124 SGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLGRQG 183
           SGLQMG+RFD SVVEYMADFLGRRKLFDDMKCLLVTV S+KGRISCRTFSICIRFLGRQG
Sbjct: 126 SGLQMGYRFDESVVEYMADFLGRRKLFDDMKCLLVTVSSYKGRISCRTFSICIRFLGRQG 185

Query: 184 RVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXXXXX 243
           RVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTAL IFRRIEL      
Sbjct: 186 RVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALTIFRRIELPDKYSY 245

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRVNST 303
                                                         AKEGAVE+VRV ST
Sbjct: 246 SNIIIGLCKFGRFGTAVEVFDEMRRAGLVPTRSAVNILIGDLCSLSAKEGAVEQVRVRST 305

Query: 304 YRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAIRVL 363
            RPFTVLVPNVNPKSGAI+ AVG+FWAAN+L+LVPS+FV V+LISELCRLGQMQEAIRVL
Sbjct: 306 RRPFTVLVPNVNPKSGAIDHAVGVFWAANRLALVPSTFVIVRLISELCRLGQMQEAIRVL 365

Query: 364 KVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXXXXX 423
           KVVE +KLRC EECYS+VM+ALCEHR VDEASDLFGRMLSQ MKPKLA            
Sbjct: 366 KVVEVNKLRCTEECYSIVMQALCEHRRVDEASDLFGRMLSQDMKPKLAIYNSVICMLCKL 425

Query: 424 XXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHFHVY 483
                                 VTYSALIHAYGE R+WSAAY LLKEMLSLG+SPHFHVY
Sbjct: 426 GNLDDAERVFKIMNRKRCVPDHVTYSALIHAYGEARNWSAAYSLLKEMLSLGISPHFHVY 485

Query: 484 SIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIYVRD 543
           S+VDKLMRE GQ DLCLKLEMKWE+QILQKLCKQGQL  AYEK+KSMLEKG  PPIYVRD
Sbjct: 486 SMVDKLMREDGQTDLCLKLEMKWESQILQKLCKQGQLGDAYEKLKSMLEKGFYPPIYVRD 545

Query: 544 AFESAFQKKGKFKIARELLQKMDGVHQHESRTRNSS 580
           AFESAFQKKGKFKIARELLQ MDGVH+HES +R +S
Sbjct: 546 AFESAFQKKGKFKIARELLQTMDGVHEHESDSRKAS 574

[Close]
BLAST of CsGy4G003070 vs. TAIR10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-09
Identity = 46/172 (26.74%), Postives = 82/172 (47.67%), Query Frame = 0 

Query: 67  VNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEFFSWSGL 126
           ++ VC  L+ K+  T + D+   L +    ++   VLQ+L  +   G  +   FF W+  
Sbjct: 102 IDKVCDFLNKKD--TSHEDVVKELSKCDVVVTESLVLQVLRRFS-NGWNQAYGFFIWANS 161

Query: 127 QMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGR--ISCRTFSICIRFLGRQGR 186
           Q G+         M D LG+ + FD M  L+  +  ++    ++  T S  +R L + G+
Sbjct: 162 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 221

Query: 187 VREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIE 237
             +A+  F EME  +G K D +  N+++ AL K+       +  LK+F  I+
Sbjct: 222 YNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK 270

[Close]
BLAST of CsGy4G003070 vs. TAIR10
Match: AT5G08310.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 3.1e-09
Identity = 55/194 (28.35%), Postives = 86/194 (44.33%), Query Frame = 0 

Query: 41  RALARRPTSRTAPTPRSPNTLGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSD 100
           R L  RP +      R  +   S    N +  ++  + P +P+   D  L      L++ 
Sbjct: 20  RQLLHRPLTTKLDNTRFLHPNQSKLAQNLI--VIFTRQPFSPD---DPELLILSPELNTK 79

Query: 101 FVLQILMNYKLLGRAKTLEFFSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTV 160
            V  +L  +K  G A    FF+W+  Q G+R D      MA  L R +    +K L+V V
Sbjct: 80  VVETVLNGFKRWGLAYL--FFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDV 139

Query: 161 LSHKGRISCRTFSICIRFLGRQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEP 220
           L+ +  +S   F   IR LG  G V EA  +F+ +     C P+   +N +L A+ K   
Sbjct: 140 LNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNS 199

Query: 221 TG-ELIDTALKIFR 234
           +  EL++  LK  R
Sbjct: 200 SSVELVEARLKEMR 206

[Close]
BLAST of CsGy4G003070 vs. TAIR10
Match: AT1G52640.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 8.4e-07
Identity = 46/158 (29.11%), Postives = 69/158 (43.67%), Query Frame = 0 

Query: 63  SSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEFFS 122
           S D+VN +  +LS+   + P  DL+H L  +   +SS+ V Q+L   K LG      FF 
Sbjct: 34  SPDLVNEISRVLSDH--RNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLG-FPAHRFFL 93

Query: 123 WSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHK-GRISCRTFSICIRFLGR 182
           W+     F         + + LG  K F  +   L+    +    IS + F I  R   R
Sbjct: 94  WARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSR 153

Query: 183 QGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKE 220
                EA   F  M  +FG KP     + +L++LC K+
Sbjct: 154 ANLPSEACRAFNRM-VEFGIKPCVDDLDQLLHSLCDKK 187

[Close]
BLAST of CsGy4G003070 vs. TAIR10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 3.5e-05
Identity = 45/169 (26.63%), Postives = 76/169 (44.97%), Query Frame = 0 

Query: 67  VNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTL--EFFSWS 126
           V  +  +L N + + P L+L   L     +L    ++++L      G A  L   FF W+
Sbjct: 67  VEKIYRILRNHHSRVPKLEL--ALNESGIDLRPGLIIRVLSR---CGDAGNLGYRFFLWA 126

Query: 127 GLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTV-LSHKGRISCRTFSICIRFLGRQG 186
             Q G+     V + M   L + + F  +  L+  +  ++   I    F + +R      
Sbjct: 127 TKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASAN 186

Query: 187 RVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIF 233
            V++A+ + +EM PK+G +PD  VF  +L ALCK     E    A K+F
Sbjct: 187 MVKKAVEVLDEM-PKYGLEPDEYVFGCLLDALCKNGSVKE----ASKVF 225

[Close]
BLAST of CsGy4G003070 vs. TAIR10
Match: AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 46.2 bits (108), Expect = 7.9e-05
Identity = 27/96 (28.12%), Postives = 51/96 (53.12%), Query Frame = 0 

Query: 136 VVEYMADF--LGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLGRQGRVREALCLFE 195
           +V Y + F     R++FDDM  + V+       ++ +TF++ +     +G++ +AL + E
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVS-------LNVQTFNVLVNGYCLEGKLEDALGMLE 235

Query: 196 EMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTAL 230
            M  +F   PDN+ +N +L A+ KK    +L +  L
Sbjct: 236 RMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264

[Close]
BLAST of CsGy4G003070 vs. Swiss-Prot
Match: sp|Q9LUJ4|PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.9e-08
Identity = 46/172 (26.74%), Postives = 82/172 (47.67%), Query Frame = 0 

Query: 67  VNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEFFSWSGL 126
           ++ VC  L+ K+  T + D+   L +    ++   VLQ+L  +   G  +   FF W+  
Sbjct: 102 IDKVCDFLNKKD--TSHEDVVKELSKCDVVVTESLVLQVLRRFS-NGWNQAYGFFIWANS 161

Query: 127 QMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGR--ISCRTFSICIRFLGRQGR 186
           Q G+         M D LG+ + FD M  L+  +  ++    ++  T S  +R L + G+
Sbjct: 162 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 221

Query: 187 VREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIE 237
             +A+  F EME  +G K D +  N+++ AL K+       +  LK+F  I+
Sbjct: 222 YNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK 270

[Close]
BLAST of CsGy4G003070 vs. Swiss-Prot
Match: sp|P0C8Q6|PP368_ARATH (Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g08310 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 5.6e-08
Identity = 55/194 (28.35%), Postives = 86/194 (44.33%), Query Frame = 0 

Query: 41  RALARRPTSRTAPTPRSPNTLGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSD 100
           R L  RP +      R  +   S    N +  ++  + P +P+   D  L      L++ 
Sbjct: 20  RQLLHRPLTTKLDNTRFLHPNQSKLAQNLI--VIFTRQPFSPD---DPELLILSPELNTK 79

Query: 101 FVLQILMNYKLLGRAKTLEFFSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTV 160
            V  +L  +K  G A    FF+W+  Q G+R D      MA  L R +    +K L+V V
Sbjct: 80  VVETVLNGFKRWGLAYL--FFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDV 139

Query: 161 LSHKGRISCRTFSICIRFLGRQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEP 220
           L+ +  +S   F   IR LG  G V EA  +F+ +     C P+   +N +L A+ K   
Sbjct: 140 LNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNS 199

Query: 221 TG-ELIDTALKIFR 234
           +  EL++  LK  R
Sbjct: 200 SSVELVEARLKEMR 206

[Close]
BLAST of CsGy4G003070 vs. Swiss-Prot
Match: sp|Q9SSR6|PPR78_ARATH (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-05
Identity = 46/158 (29.11%), Postives = 69/158 (43.67%), Query Frame = 0 

Query: 63  SSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEFFS 122
           S D+VN +  +LS+   + P  DL+H L  +   +SS+ V Q+L   K LG      FF 
Sbjct: 34  SPDLVNEISRVLSDH--RNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLG-FPAHRFFL 93

Query: 123 WSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHK-GRISCRTFSICIRFLGR 182
           W+     F         + + LG  K F  +   L+    +    IS + F I  R   R
Sbjct: 94  WARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSR 153

Query: 183 QGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKE 220
                EA   F  M  +FG KP     + +L++LC K+
Sbjct: 154 ANLPSEACRAFNRM-VEFGIKPCVDDLDQLLHSLCDKK 187

[Close]
BLAST of CsGy4G003070 vs. Swiss-Prot
Match: sp|P0C8A0|PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 6.4e-04
Identity = 45/169 (26.63%), Postives = 76/169 (44.97%), Query Frame = 0 

Query: 67  VNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTL--EFFSWS 126
           V  +  +L N + + P L+L   L     +L    ++++L      G A  L   FF W+
Sbjct: 67  VEKIYRILRNHHSRVPKLEL--ALNESGIDLRPGLIIRVLSR---CGDAGNLGYRFFLWA 126

Query: 127 GLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTV-LSHKGRISCRTFSICIRFLGRQG 186
             Q G+     V + M   L + + F  +  L+  +  ++   I    F + +R      
Sbjct: 127 TKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASAN 186

Query: 187 RVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIF 233
            V++A+ + +EM PK+G +PD  VF  +L ALCK     E    A K+F
Sbjct: 187 MVKKAVEVLDEM-PKYGLEPDEYVFGCLLDALCKNGSVKE----ASKVF 225

[Close]
BLAST of CsGy4G003070 vs. TrEMBL
Match: tr|A0A1S3BXL0|A0A1S3BXL0_CUCME (pentatricopeptide repeat-containing protein At5g65560-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494551 PE=4 SV=1)

HSP 1 Score: 897.9 bits (2319), Expect = 1.2e-257
Identity = 551/579 (95.16%), Postives = 561/579 (96.89%), Query Frame = 0 

Query: 1   MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT 60
           MLVTIRSSSALLKLLSLHFHG SSHFFSTSKTT HIAIAPRAL RRPTSRTAPTPRSPNT
Sbjct: 1   MLVTIRSSSALLKLLSLHFHGFSSHFFSTSKTTKHIAIAPRALTRRPTSRTAPTPRSPNT 60

Query: 61  LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF 120
           +GSSDVVNSVCSLLSNKNPQTPNLD++HLLKRFKDNLSSD VLQILMNYKLLGRAKTLEF
Sbjct: 61  VGSSDVVNSVCSLLSNKNPQTPNLDINHLLKRFKDNLSSDLVLQILMNYKLLGRAKTLEF 120

Query: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180
           FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG
Sbjct: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180

Query: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX 240
           RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIEL XX
Sbjct: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELPXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AKEGA+EKVRV
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAKEGALEKVRV 300

Query: 301 NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI 360
            STYRPFTVLVPNVNPKSGAIEPAVGIFWAANKL LVPSSFVTVQLISELCR+GQMQEAI
Sbjct: 301 RSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLGLVPSSFVTVQLISELCRVGQMQEAI 360

Query: 361 RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420
           +VLKVVE DKLRCAEECYSVVMKALCEHRH+DEASDLFGRMLSQGMKPKLAXXXXXXXXX
Sbjct: 361 KVLKVVERDKLRCAEECYSVVMKALCEHRHIDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF 480
           XXXXXXXXXXXXXXXXXXXXXXXXX     LIHAYGENR+WSAAYGLLKEMLSLGMSPHF
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIHAYGENRNWSAAYGLLKEMLSLGMSPHF 480

Query: 481 HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY 540
           HVYS+VDKLMREHGQ+DLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGL PPIY
Sbjct: 481 HVYSLVDKLMREHGQVDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLCPPIY 540

Query: 541 VRDAFESAFQKKGKFKIARELLQKMDGVHQHESRTRNSS 580
           VRDAFESAFQKKGKFKIARELLQKMDGVHQHES TRNSS
Sbjct: 541 VRDAFESAFQKKGKFKIARELLQKMDGVHQHESGTRNSS 579

[Close]
BLAST of CsGy4G003070 vs. TrEMBL
Match: tr|A0A0A0KU61|A0A0A0KU61_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G013030 PE=4 SV=1)

HSP 1 Score: 888.3 bits (2294), Expect = 9.5e-255
Identity = 552/552 (100.00%), Postives = 552/552 (100.00%), Query Frame = 0 

Query: 1   MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT 60
           MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT
Sbjct: 1   MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT 60

Query: 61  LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF 120
           LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF
Sbjct: 61  LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF 120

Query: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180
           FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG
Sbjct: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180

Query: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX 240
           RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX
Sbjct: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV 300

Query: 301 NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI 360
           NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI
Sbjct: 301 NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI 360

Query: 361 RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420
           RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX
Sbjct: 361 RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF 480
           XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF 480

Query: 481 HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY 540
           HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY
Sbjct: 481 HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY 540

Query: 541 VRDAFESAFQKK 553
           VRDAFESAFQKK
Sbjct: 541 VRDAFESAFQKK 552

[Close]
BLAST of CsGy4G003070 vs. TrEMBL
Match: tr|A0A1S3BX34|A0A1S3BX34_CUCME (putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494551 PE=4 SV=1)

HSP 1 Score: 793.9 bits (2049), Expect = 2.4e-226
Identity = 509/579 (87.91%), Postives = 517/579 (89.29%), Query Frame = 0 

Query: 1   MLVTIRSSSALLKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNT 60
           MLVTIRSSSALLKLLSLHFHG SSHFFSTSKTT HIAIAPRAL RRPTSRTAPTPRSPNT
Sbjct: 1   MLVTIRSSSALLKLLSLHFHGFSSHFFSTSKTTKHIAIAPRALTRRPTSRTAPTPRSPNT 60

Query: 61  LGSSDVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEF 120
           +GSSD                                             LLGRAKTLEF
Sbjct: 61  VGSSD---------------------------------------------LLGRAKTLEF 120

Query: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180
           FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG
Sbjct: 121 FSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLG 180

Query: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXX 240
           RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIEL XX
Sbjct: 181 RQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELPXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRV 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AKEGA+EKVRV
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAKEGALEKVRV 300

Query: 301 NSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAI 360
            STYRPFTVLVPNVNPKSGAIEPAVGIFWAANKL LVPSSFVTVQLISELCR+GQMQEAI
Sbjct: 301 RSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLGLVPSSFVTVQLISELCRVGQMQEAI 360

Query: 361 RVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420
           +VLKVVE DKLRCAEECYSVVMKALCEHRH+DEASDLFGRMLSQGMKPKLAXXXXXXXXX
Sbjct: 361 KVLKVVERDKLRCAEECYSVVMKALCEHRHIDEASDLFGRMLSQGMKPKLAXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHF 480
           XXXXXXXXXXXXXXXXXXXXXXXXX     LIHAYGENR+WSAAYGLLKEMLSLGMSPHF
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIHAYGENRNWSAAYGLLKEMLSLGMSPHF 480

Query: 481 HVYSIVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIY 540
           HVYS+VDKLMREHGQ+DLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGL PPIY
Sbjct: 481 HVYSLVDKLMREHGQVDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLCPPIY 534

Query: 541 VRDAFESAFQKKGKFKIARELLQKMDGVHQHESRTRNSS 580
           VRDAFESAFQKKGKFKIARELLQKMDGVHQHES TRNSS
Sbjct: 541 VRDAFESAFQKKGKFKIARELLQKMDGVHQHESGTRNSS 534

[Close]
BLAST of CsGy4G003070 vs. TrEMBL
Match: tr|U5FMW1|U5FMW1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G033000v3 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 4.0e-152
Identity = 314/557 (56.37%), Postives = 375/557 (67.32%), Query Frame = 0 

Query: 12  LKLLSLHFHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNTLGS--SDVVNS 71
           L LLS  F  SS     +S +  +I+  P+   +RPTS     P+  +   S  S  V S
Sbjct: 12  LSLLSNLFKNSSKPSLFSSISNPNIS-NPKTATKRPTSLATLNPQETSLTVSITSSPVAS 71

Query: 72  VCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEFFSWSGLQMG 131
           +CSLLSN   +   + ++ LL+ +K+ L+SD VLQ+LMNYK LGR KTLEFFSW+G+QMG
Sbjct: 72  ICSLLSNSVKEP--VKIESLLEDYKEMLNSDIVLQVLMNYKQLGRVKTLEFFSWAGMQMG 131

Query: 132 FRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLGRQGRVREAL 191
           F+FD  V+EYM DFLGRRKLFDDMKC L+TVL H GR++CR FSICIRFLGRQGR REAL
Sbjct: 132 FKFDDCVIEYMVDFLGRRKLFDDMKCFLMTVLFHNGRVTCRAFSICIRFLGRQGRFREAL 191

Query: 192 CLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXXXXXXXXXXX 251
           CLF+EME KF C+PDN V+NNMLY LCKK+ +GELID AL IFR IE  XXXXXXXXXXX
Sbjct: 192 CLFQEMETKFNCRPDNFVYNNMLYVLCKKDTSGELIDVALSIFRGIESPXXXXXXXXXXX 251

Query: 252 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRVNSTYRPFTV 311
           XXX                                     AKEGAV +VRV+S+ +P+T+
Sbjct: 252 XXXFGRFETAIEFFQEMGRARLVPTRSAVNFLMRELCLLSAKEGAVNEVRVHSSRKPYTI 311

Query: 312 LVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAIRVLKVVEGD 371
           LVPNV PKSGAI PAVG+F A   L L+PS+FV +QLI+ELCRLG+M EA  +LKVVE  
Sbjct: 312 LVPNVGPKSGAIRPAVGVFLAVCDLGLLPSTFVIIQLITELCRLGKMTEAFEILKVVEER 371

Query: 372 KLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXXXXXXXXXXX 431
           K  C  E YS+VM+ALCE+R V+EAS LFGRMLS  +KPKL                   
Sbjct: 372 KQNCVAEGYSIVMQALCEYRLVEEASHLFGRMLSLELKPKLVVYNSIICMLCKVGRLDDA 431

Query: 432 XXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHFHVYSIVDKL 491
                           VTY+AL+HAYGE R+W  AY LL EML LG  PHFH Y++VDKL
Sbjct: 432 QRVFQIMSKKRCLPDSVTYTALVHAYGEARNWEVAYDLLMEMLGLGWIPHFHAYTLVDKL 491

Query: 492 MREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIYVRDAFESAF 551
           +REHG+IDL  KLE K E+QIL K CK GQLEAAYEK++SMLEKG  PP+YVRDAFE AF
Sbjct: 492 LREHGRIDLSNKLERKLESQILHKHCKAGQLEAAYEKLRSMLEKGFYPPMYVRDAFEHAF 551

Query: 552 QKKGKFKIARELLQKMD 567
           QK GK +IARELL+ MD
Sbjct: 552 QKYGKLEIARELLENMD 565

[Close]
BLAST of CsGy4G003070 vs. TrEMBL
Match: tr|A0A251R0H6|A0A251R0H6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G186400 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 5.2e-152
Identity = 347/564 (61.52%), Postives = 401/564 (71.10%), Query Frame = 0 

Query: 8   SSALLKLL--SLHFHGSSSHFFSTSKTTNHIAIAPR-ALARRPTSRTAPTPRSPNTLGSS 67
           SS L K+L     F   SS     S T NHI   PR +  RRP S  AP PR P+T+ S+
Sbjct: 15  SSILFKILIPFSQFSPFSSKSNPKSTTQNHITTIPRKSTTRRPISLAAPVPRVPDTV-SA 74

Query: 68  DVVNSVCSLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEFFSWS 127
            +VNSVCSLLS    +  +  +D LLK FK  LSS+ VLQILMNYK LGR+KTL+FFSW+
Sbjct: 75  SIVNSVCSLLSKDTHEITS--IDSLLKNFKKTLSSELVLQILMNYKQLGRSKTLQFFSWA 134

Query: 128 GLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLGRQGR 187
           G QM F+FD  VVEYMADFLGRRKLFDDMKCLL+TV SHKGR+SCR+ SICIRFLGRQGR
Sbjct: 135 GFQMRFQFDDCVVEYMADFLGRRKLFDDMKCLLLTVSSHKGRVSCRSVSICIRFLGRQGR 194

Query: 188 VREALCLFEEMEPKFGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELXXXXXXX 247
           ++EALC+FEEME KFGCKPDNLV+NNMLY LCKKE +G LID AL +FRRIE  XXXXXX
Sbjct: 195 IKEALCVFEEMESKFGCKPDNLVYNNMLYVLCKKESSGHLIDFALAVFRRIESPXXXXXX 254

Query: 248 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGAVEKVRVNSTY 307
           XXXXXXX                                      AKEGAVEKVRV   Y
Sbjct: 255 XXXXXXXKFGRFETAVEVFGDMCKSGLVPTRSAVNVLIGDLCLFSAKEGAVEKVRVKDPY 314

Query: 308 RPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAIRVLK 367
           R FT+LVP V     AI+PAVG+FW   KL L+PS+FV ++LIS LC+LG+ +EA++VLK
Sbjct: 315 RTFTILVPKVGGNRDAIQPAVGVFWEVYKLGLLPSAFVIIRLISGLCQLGKAEEAVKVLK 374

Query: 368 VVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAXXXXXXXXXXXXX 427
            VEG KL C EE Y +VMKALCEH +VDEA +LFGRMLS  MKPKLA    XXXXXXXXX
Sbjct: 375 AVEGKKLSCVEEGYCIVMKALCEHCYVDEACNLFGRMLSHSMKPKLAVYNHXXXXXXXXX 434

Query: 428 XXXXXXXXXXXXXXXXXXXXXVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHFHVYS 487
           XXXXXXXXXXXXXXXXXXXXX                    GLL EML LG SPHFH Y 
Sbjct: 435 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLIEMLGLGCSPHFHTYR 494

Query: 488 IVDKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIYVRDA 547
           +VDK++RE+GQ+DLCLKLE K E   LQKLCK GQLEAAYEK+KSM+EKG  PP+YVRDA
Sbjct: 495 LVDKILRENGQMDLCLKLERKLETLTLQKLCKDGQLEAAYEKLKSMIEKGFYPPVYVRDA 554

Query: 548 FESAFQKKGKFKIARELLQKMDGV 569
           F++AF++ GK KIA+ELL+K+D +
Sbjct: 555 FQNAFRRYGKSKIAQELLEKIDEI 575

The following BLAST results are available for this feature:
BLAST of CsGy4G003070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152299.14.2e-270100.00PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like [Cucumis s... [more]
XP_008453994.11.8e-25795.16PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like isoform X1... [more]
KGN53058.11.4e-254100.00hypothetical protein Csa_4G013030 [Cucumis sativus][more]
XP_008453997.13.7e-22687.91PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 isofor... [more]
XP_022955543.11.3e-21871.53pentatricopeptide repeat-containing protein At4g20090-like [Cucurbita moschata][more]
BLAST of CsGy4G003070 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G22670.11.1e-0926.74Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G08310.13.1e-0928.35Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G52640.18.4e-0729.11Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G49730.13.5e-0526.63Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G16880.17.9e-0528.13Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsGy4G003070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LUJ4|PP248_ARATH1.9e-0826.74Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... [more]
sp|P0C8Q6|PP368_ARATH5.6e-0828.35Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS... [more]
sp|Q9SSR6|PPR78_ARATH1.5e-0529.11Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop... [more]
sp|P0C8A0|PP275_ARATH6.4e-0426.63Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... [more]
BLAST of CsGy4G003070 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BXL0|A0A1S3BXL0_CUCME1.2e-25795.16pentatricopeptide repeat-containing protein At5g65560-like isoform X1 OS=Cucumis... [more]
tr|A0A0A0KU61|A0A0A0KU61_CUCSA9.5e-255100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G013030 PE=4 SV=1[more]
tr|A0A1S3BX34|A0A1S3BX34_CUCME2.4e-22687.91putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 OS=Cuc... [more]
tr|U5FMW1|U5FMW1_POPTR4.0e-15256.37Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G033000v3 PE=... [more]
tr|A0A251R0H6|A0A251R0H6_PRUPE5.2e-15261.52Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G186400 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005575 cellular_component
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G003070.1CsGy4G003070.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 171..217
e-value: 1.8E-7
score: 31.1
coord: 238..287
e-value: 2.9E-7
score: 30.5
coord: 410..455
e-value: 1.1E-11
score: 44.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 346..364
e-value: 1.0
score: 9.7
coord: 377..405
e-value: 8.5E-5
score: 22.5
coord: 512..535
e-value: 0.63
score: 10.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 446..478
e-value: 2.1E-7
score: 28.7
coord: 241..274
e-value: 4.1E-6
score: 24.6
coord: 377..408
e-value: 1.5E-7
score: 29.1
coord: 412..444
e-value: 2.1E-6
score: 25.5
coord: 171..204
e-value: 1.7E-7
score: 29.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 409..443
score: 10.304
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 444..478
score: 12.112
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 168..203
score: 8.44
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 503..537
score: 7.794
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 204..238
score: 5.744
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 239..273
score: 11.323
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 374..408
score: 11.279
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 339..373
score: 6.84
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 222..300
e-value: 2.7E-10
score: 41.8
coord: 75..221
e-value: 1.7E-14
score: 55.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 316..510
e-value: 7.3E-37
score: 129.4
coord: 511..578
e-value: 2.2E-5
score: 26.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..63
NoneNo IPR availablePANTHERPTHR44149FAMILY NOT NAMEDcoord: 131..290
coord: 317..500
NoneNo IPR availablePANTHERPTHR44149FAMILY NOT NAMEDcoord: 171..387
NoneNo IPR availablePANTHERPTHR44149:SF1SUBFAMILY NOT NAMEDcoord: 171..387
NoneNo IPR availablePANTHERPTHR44149:SF1SUBFAMILY NOT NAMEDcoord: 131..290
coord: 317..500