CsGy4G002920 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G002920
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	probable WRKY transcription factor 48
Location	Chr4 : 1877426 .. 1879007 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAAAATTTCCCTAATTTTCTCTCAACTTCATCCTCTTCATCCGCCCTTTCTCTCCAACAAATCTTGTTTTCTCGAGCTTCCAACCACGGGGGAGACCATTTTCGACAGCCACCCTTCGTCTCTGATGGCTATCCGATCTTGTTTCGTGACGTTTCAACAGACGACATGTCGTTTGATGCAACGAGTAGTGTGAAGGATGATGATCGTAATAATGTTGCTGTTTCGGTTAGTGAAAGGTTTCGTGTTGATGGGTCGTCGGGTAGAAGTGGAGTAGTGGAATATGGGTTGAAGAAGGAGGAGGGGGAGGGAGGGACGAGGGGAGGATTGTGATAAGAAGAAGAAGATGAGAAATAGAAGATTTGCTTTTCAAACAAGAAGTCAAGTTGATATTCTTGATGATGGTTATAGATGGAGGAAGTATGGACAGAAGGCTGTGAAGAACAACAAATTCCCAAGGTATAATTCCATTCTTTATTTTTTACAATTTTTACTTTCCTACTACTCCACAATTCAATTTGATAAAATATAATATATACACACTTCAATTAAAATTGATAAATTTTATAGCAAATTAAACTAACTTTGAGATATATGATAATTAATTATTTCTTGGCATTAAAAGATATCCAAAAAAGTCAATTTTGATGGTTAGCATTGAATGATACCATCAATTATTTCTATTAGCACTACTTATCTTTTTTTCTTCCAATGGGTATATATATATATATCACTTTCTTCTTATGATTTTTCTTCCTAAAGTTATTTATAATATTTATGAGTTGGTCGGAATAGACCTCCCAAACACAAACATAAATCTTAGAACTATATATTTACAAAATTAGCTCTATTATAAATTTAACTATGGTTTTCATTTTCGTGGAGTAAAAATTGAATTATTAGCCTAATTCTAAAAATGAAAATATGGGTTTAAAAAATATATTTTCAAAGTTTTCCAAACTTCACTTGTGGGTATTGATGAGGAAGAGATGTGTATTAAACATTTTCAGAAGCTACTATAGATGTACACACCAAGGGTGCAAAGTGAAGAAGCAAGTTCAAAGGCTAACAAGAGATGAAGGAGTGGTGGTGACAACTTATGAAGGCATTCATTCTCATCCCATTGAGAAATCCACTGATAATTTTGAGCATATTTTGTCTCAAATGCAAATTTACACTACTTCTTATTGACATTATCATCATCTTAGATAGCATAGGCTATTACATACACACACACACACACACACTTTCAATTTTCCTTTTTAATTATATACAAAAACTTTACTCATCTCTTCTGTACATTTCTTTTATTTAATTTGTTGCATAAAGGAAACAATATCATTTATTTCATTCCTATTTGTGTGTTGGAAATGACGACTTGGGCTTTTAGCCCAATGCTCAAATGGATGTTAGAGAAAAGTTGCAAACGTTTTTTCGAGGCCGAATTATATATATTTATATAAGTCATTCAACTTCGTGGTTAGTTCAAAAATCATAGATACCCTCATTAATTTATTTTTTTATGCCAAATTTGTTAGTATTCAAAATAAAAATAAACATTTTAATAACATAGTCTTAA

mRNA sequence

ATGATGGAAAATTTCCCTAATTTTCTCTCAACTTCATCCTCTTCATCCGCCCTTTCTCTCCAACAAATCTTGTTTTCTCGAGCTTCCAACCACGGGGGAGACCATTTTCGACAGCCACCCTTCGTCTCTGATGGCTATCCGATCTTGTTTCGTGACGTTTCAACAGACGACATGTCGTTTGATGCAACGAGTAGTGTGAAGGATGATGATCGTAATAATGTTGCTGTTTCGGTTAGTGAAAGGTTTCGTGTTGATGGGTCGTCGGGTAGAAGTGGAGTAGTGGAATATGGGTTGAAGAAGGAGGAGGGGGAGGGAGGGACGAGGGGAGGATTATGGAGGAAGTATGGACAGAAGGCTGTGAAGAACAACAAATTCCCAAGAAGCTACTATAGATGTACACACCAAGGGTGCAAAGTGAAGAAGCAAGTTCAAAGGCTAACAAGAGATGAAGGAGTGGTGGTGACAACTTATGAAGGCATTCATTCTCATCCCATTGAGAAATCCACTGATAATTTTGAGCATATTTTGTCTCAAATGCAAATTTACACTACTTCTTATTGACATTATCATCATCTTAGATAGCATAGGCTATTACATACACACACACACACACACACTTTCAATTTTCCTTTTTAATTATATACAAAAACTTTACTCATCTCTTCTGTACATTTCTTTTATTTAATTTGTTGCATAAAGGAAACAATATCATTTATTTCATTCCTATTTGTGTGTTGGAAATGACGACTTGGGCTTTTAGCCCAATGCTCAAATGGATGTTAGAGAAAAGTTGCAAACGTTTTTTCGAGGCCGAATTATATATATTTATATAAGTCATTCAACTTCGTGGTTAGTTCAAAAATCATAGATACCCTCATTAATTTATTTTTTTATGCCAAATTTGTTAGTATTCAAAATAAAAATAAACATTTTAATAACATAGTCTTAA

Coding sequence (CDS)

ATGATGGAAAATTTCCCTAATTTTCTCTCAACTTCATCCTCTTCATCCGCCCTTTCTCTCCAACAAATCTTGTTTTCTCGAGCTTCCAACCACGGGGGAGACCATTTTCGACAGCCACCCTTCGTCTCTGATGGCTATCCGATCTTGTTTCGTGACGTTTCAACAGACGACATGTCGTTTGATGCAACGAGTAGTGTGAAGGATGATGATCGTAATAATGTTGCTGTTTCGGTTAGTGAAAGGTTTCGTGTTGATGGGTCGTCGGGTAGAAGTGGAGTAGTGGAATATGGGTTGAAGAAGGAGGAGGGGGAGGGAGGGACGAGGGGAGGATTATGGAGGAAGTATGGACAGAAGGCTGTGAAGAACAACAAATTCCCAAGAAGCTACTATAGATGTACACACCAAGGGTGCAAAGTGAAGAAGCAAGTTCAAAGGCTAACAAGAGATGAAGGAGTGGTGGTGACAACTTATGAAGGCATTCATTCTCATCCCATTGAGAAATCCACTGATAATTTTGAGCATATTTTGTCTCAAATGCAAATTTACACTACTTCTTATTGA

Protein sequence

MMENFPNFLSTSSSSSALSLQQILFSRASNHGGDHFRQPPFVSDGYPILFRDVSTDDMSFDATSSVKDDDRNNVAVSVSERFRVDGSSGRSGVVEYGLKKEEGEGGTRGGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTTSY

Homology

[Close]

BLAST of CsGy4G002920 vs. NCBI nr
Match: XP_004152302.2 (PREDICTED: probable WRKY transcription factor 75 [Cucumis sativus] >KGN53043.1 hypothetical protein Csa_4G012390 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 1.2e-85
Identity = 177/215 (82.33%), Postives = 179/215 (83.26%), Query Frame = 0


Query: 1   MMENFPNFLSTSSSSSALSLQQILFSRASNHGGDHFRQPPFVSDGYPILFRDVSTDDMSF 60
           MMENFP+FLSTSSSSSALSLQQILFSRASNHGGDHFRQPPFVSDG+PILFRDVSTDDMSF
Sbjct: 1   MMENFPSFLSTSSSSSALSLQQILFSRASNHGGDHFRQPPFVSDGFPILFRDVSTDDMSF 60

Query: 61  DATSSVKDDDRNNVAVSVS-ERFRVDGSSGRSGVVEYGLKKE------------------ 120
           DATSSVKDDDRNNVAVSVS ERFRVDGSSGRSGVVEYGLKKE                  
Sbjct: 61  DATSSVKDDDRNNVAVSVSTERFRVDGSSGRSGVVEYGLKKEXXXXXXXXXXXXXXXXXX 120

Query: 121 --EGEGGTR--------GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEG 180
                  TR        G  WRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEG
Sbjct: 121 XXXXXXXTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEG 180

Query: 181 VVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTTSY 187
           VVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTTSY
Sbjct: 181 VVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTTSY 215

[Close]

BLAST of CsGy4G002920 vs. NCBI nr
Match: XP_008454014.1 (PREDICTED: probable WRKY transcription factor 48 [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 145/219 (66.21%), Postives = 151/219 (68.95%), Query Frame = 0


Query: 1   MMENFPNFLSTSSSSSALSLQQILFSRASNHGGDHFRQPPFVSDGYPILFRDVSTDDMSF 60
           MMENFPNFLSTSSSSS+LSLQQILFSRAS+H G HFR PP VSDG+P+LFRDVSTDDMSF
Sbjct: 1   MMENFPNFLSTSSSSSSLSLQQILFSRASDHRGHHFRHPPSVSDGFPMLFRDVSTDDMSF 60

Query: 61  DATSSV------KDDDRNNVAVSVSERFRVDGSSGRSGVVEYGLKKEEGEGGTRGG---- 120
           DATSSV                   ERFRVDGSS      E G  +     G RGG    
Sbjct: 61  DATSSVXXXXXXXXXXXXXXXXXXXERFRVDGSSALKKAEEEGEVRAGAMMGERGGGDCD 120

Query: 121 -------------------------LWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQR 180
                                     WRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQR
Sbjct: 121 KKKKMRSRRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQR 180

Query: 181 LTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTT 185
           LTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYT+
Sbjct: 181 LTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTS 219

[Close]

BLAST of CsGy4G002920 vs. NCBI nr
Match: XP_022972157.1 (probable WRKY transcription factor 75 [Cucurbita maxima])

HSP 1 Score: 198.7 bits (504), Expect = 1.7e-47
Identity = 121/214 (56.54%), Postives = 140/214 (65.42%), Query Frame = 0


Query: 1   MMENFPNFLSTSSSSSALSLQQILFSRASNH---GGDHFRQPPFVSDGYPILFRDVSTDD 60
           MME++P+FLS SSSS++LS Q+ L SRAS      G HFR+   +S G+P LF DVS   
Sbjct: 1   MMESYPDFLSASSSSNSLSFQKTLISRASEPTGIHGSHFREAG-ISGGFP-LFPDVSRSY 60

Query: 61  MSFDATSSVKDDDRNNVAVSVSERFRVDGSSGRSGVVEYGLKKEEGEGGTRGG------- 120
           MS D  SS+K+D      VSVS+ F  DGS+G   VVE G +  E     +G        
Sbjct: 61  MSVDTRSSMKED-----MVSVSKGFHADGSAGE--VVEGGAETTEMAAARQGDNDKKKKT 120

Query: 121 --------------------LWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDE 180
                                WRKYGQK VKNNKFPRSYY+CTHQGCKVKKQVQRLTRDE
Sbjct: 121 RSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFPRSYYKCTHQGCKVKKQVQRLTRDE 180

Query: 181 GVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTT 185
           GVVVTTYEGIHSHPI+KSTDNFEHIL+QMQIYT+
Sbjct: 181 GVVVTTYEGIHSHPIQKSTDNFEHILTQMQIYTS 205

[Close]

BLAST of CsGy4G002920 vs. NCBI nr
Match: XP_022932710.1 (probable WRKY transcription factor 75 [Cucurbita moschata])

HSP 1 Score: 186.4 bits (472), Expect = 8.7e-44
Identity = 115/207 (55.56%), Postives = 138/207 (66.67%), Query Frame = 0


Query: 1   MMENFPNFLSTSSSSSALSLQQILFSRASNH---GGDHFRQPPFVSDGYPILFRDVSTDD 60
           MME++P+FLS SSSS++LS Q++L SRAS      G HFR+   +S G+P LF DVS   
Sbjct: 1   MMESYPDFLSASSSSTSLSFQKMLISRASEPTGIHGSHFREAG-ISGGFP-LFPDVSGSY 60

Query: 61  MSFDATSSVKDDDRNNVAVSVSERFRVDGSSGRSGVVEYGLKKE---EGEGGTR------ 120
           MS    SS+K+D      VSVS+   V+   G +   E    ++   + +  TR      
Sbjct: 61  MSVGTRSSMKED-----MVSVSKGSAVEVVEGGAETTEMTAARQGDNDKKKKTRSRRFAF 120

Query: 121 -----------GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTY 180
                      G  WRKYGQK VKNNKFPRSYY+CTHQGCKVKKQVQRLTRDEGVVVTTY
Sbjct: 121 QTRSQVDILDDGYRWRKYGQKGVKNNKFPRSYYKCTHQGCKVKKQVQRLTRDEGVVVTTY 180

Query: 181 EGIHSHPIEKSTDNFEHILSQMQIYTT 185
           EGIHSHPI+KSTDNFEHIL+QMQIYT+
Sbjct: 181 EGIHSHPIQKSTDNFEHILTQMQIYTS 200

[Close]

BLAST of CsGy4G002920 vs. NCBI nr
Match: XP_023539084.1 (probable WRKY transcription factor 75 isoform X1 [Cucurbita pepo subsp. pepo] >AXF54192.1 WRKY1 [Cucurbita pepo])

HSP 1 Score: 185.3 bits (469), Expect = 1.9e-43
Identity = 115/207 (55.56%), Postives = 137/207 (66.18%), Query Frame = 0


Query: 1   MMENFPNFLSTSSSSSALSLQQILFSRASNHGGDH---FRQPPFVSDGYPILFRDVSTDD 60
           MME++P+FLS SSSS++LS Q++L SRAS   G H   FR+   +S G+P LF DVS   
Sbjct: 1   MMESYPDFLSASSSSTSLSFQKMLISRASEPTGIHGSQFREAA-ISGGFP-LFPDVSGSY 60

Query: 61  MSFDATSSVKDDDRNNVAVSVSERFRVDGSSGRSGVVEYGLKKE---EGEGGTR------ 120
           MS    SS K+D      VSVS+   V+   G +   E    ++   + +  TR      
Sbjct: 61  MSVGTRSSTKED-----MVSVSKGSAVEVVEGGAETTEMTAARQGDNDKKKKTRSRRFAF 120

Query: 121 -----------GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTY 180
                      G  WRKYGQK VKNNKFPRSYY+CTHQGCKVKKQVQRLTRDEGVVVTTY
Sbjct: 121 QTRSQVDILDDGYRWRKYGQKGVKNNKFPRSYYKCTHQGCKVKKQVQRLTRDEGVVVTTY 180

Query: 181 EGIHSHPIEKSTDNFEHILSQMQIYTT 185
           EGIHSHPI+KSTDNFEHIL+QMQIYT+
Sbjct: 181 EGIHSHPIQKSTDNFEHILTQMQIYTS 200

[Close]

BLAST of CsGy4G002920 vs. TAIR10
Match: AT5G13080.1 (WRKY DNA-binding protein 75)

HSP 1 Score: 136.3 bits (342), Expect = 1.9e-32
Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQKAVKNNKFPRSYYRCT+ GC VKKQVQRLT D+ VVVTTYEG+HSHPIEKS
Sbjct: 69  GYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHPIEKS 128

Query: 169 TDNFEHILSQMQIYTT 185
           T+NFEHIL+QMQIY++
Sbjct: 129 TENFEHILTQMQIYSS 144

[Close]

BLAST of CsGy4G002920 vs. TAIR10
Match: AT3G01970.1 (WRKY DNA-binding protein 45)

HSP 1 Score: 119.4 bits (298), Expect = 2.4e-27
Identity = 52/74 (70.27%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQKAVKNN FPRSYY+CT +GC+VKKQVQR   DEGVVVTTY+G+H+H ++K 
Sbjct: 67  GYRWRKYGQKAVKNNPFPRSYYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHTHAVDKP 126

Query: 169 TDNFEHILSQMQIY 183
           +DNF HIL+QM I+
Sbjct: 127 SDNFHHILTQMHIF 140

[Close]

BLAST of CsGy4G002920 vs. TAIR10
Match: AT1G64000.1 (WRKY DNA-binding protein 56)

HSP 1 Score: 102.1 bits (253), Expect = 3.9e-22
Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQK+VKNN  PRSYYRCT+  C VKKQVQRL +D  VVVTTYEG+H+HP EK 
Sbjct: 116 GYRWRKYGQKSVKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKL 175

Query: 169 TDNFEHILSQMQ 181
            +    +L Q+Q
Sbjct: 176 METLSPLLRQLQ 187

[Close]

BLAST of CsGy4G002920 vs. TAIR10
Match: AT5G41570.1 (WRKY DNA-binding protein 24)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21
Identity = 45/76 (59.21%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQK+VK+N  PRSYYRCT+  C VKKQVQRL +D  VVVTTYEG+H+HP EK 
Sbjct: 100 GYRWRKYGQKSVKHNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKL 159

Query: 169 TDNFEHILSQMQIYTT 185
            +    +L Q+Q  ++
Sbjct: 160 METLNPLLRQLQFLSS 175

[Close]

BLAST of CsGy4G002920 vs. TAIR10
Match: AT2G46130.1 (WRKY DNA-binding protein 43)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQK+VKN+ +PRSYYRCT   C VKKQVQRL+++  +V TTYEGIH+HP E+ 
Sbjct: 32  GYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSIVETTYEGIHNHPCEEL 91

Query: 169 TDNFEHILSQMQ 181
                 +L Q+Q
Sbjct: 92  MQTLTPLLHQLQ 103

[Close]

BLAST of CsGy4G002920 vs. Swiss-Prot
Match: sp|Q9FYA2|WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.4e-31
Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQKAVKNNKFPRSYYRCT+ GC VKKQVQRLT D+ VVVTTYEG+HSHPIEKS
Sbjct: 69  GYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHPIEKS 128

Query: 169 TDNFEHILSQMQIYTT 185
           T+NFEHIL+QMQIY++
Sbjct: 129 TENFEHILTQMQIYSS 144

[Close]

BLAST of CsGy4G002920 vs. Swiss-Prot
Match: sp|Q9S763|WRK45_ARATH (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana OX=3702 GN=WRKY45 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.3e-26
Identity = 52/74 (70.27%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQKAVKNN FPRSYY+CT +GC+VKKQVQR   DEGVVVTTY+G+H+H ++K 
Sbjct: 67  GYRWRKYGQKAVKNNPFPRSYYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHTHAVDKP 126

Query: 169 TDNFEHILSQMQIY 183
           +DNF HIL+QM I+
Sbjct: 127 SDNFHHILTQMHIF 140

[Close]

BLAST of CsGy4G002920 vs. Swiss-Prot
Match: sp|Q8VWQ4|WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.0e-21
Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQK+VKNN  PRSYYRCT+  C VKKQVQRL +D  VVVTTYEG+H+HP EK 
Sbjct: 116 GYRWRKYGQKSVKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKL 175

Query: 169 TDNFEHILSQMQ 181
            +    +L Q+Q
Sbjct: 176 METLSPLLRQLQ 187

[Close]

BLAST of CsGy4G002920 vs. Swiss-Prot
Match: sp|Q9FFS3|WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.7e-20
Identity = 45/76 (59.21%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQK+VK+N  PRSYYRCT+  C VKKQVQRL +D  VVVTTYEG+H+HP EK 
Sbjct: 100 GYRWRKYGQKSVKHNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKL 159

Query: 169 TDNFEHILSQMQIYTT 185
            +    +L Q+Q  ++
Sbjct: 160 METLNPLLRQLQFLSS 175

[Close]

BLAST of CsGy4G002920 vs. Swiss-Prot
Match: sp|Q8GY11|WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-18
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQK+VKN+ +PRSYYRCT   C VKKQVQRL+++  +V TTYEGIH+HP E+ 
Sbjct: 32  GYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSIVETTYEGIHNHPCEEL 91

Query: 169 TDNFEHILSQMQ 181
                 +L Q+Q
Sbjct: 92  MQTLTPLLHQLQ 103

[Close]

BLAST of CsGy4G002920 vs. TrEMBL
Match: tr|A0A0A0KU50|A0A0A0KU50_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012390 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 7.9e-86
Identity = 177/215 (82.33%), Postives = 179/215 (83.26%), Query Frame = 0


Query: 1   MMENFPNFLSTSSSSSALSLQQILFSRASNHGGDHFRQPPFVSDGYPILFRDVSTDDMSF 60
           MMENFP+FLSTSSSSSALSLQQILFSRASNHGGDHFRQPPFVSDG+PILFRDVSTDDMSF
Sbjct: 1   MMENFPSFLSTSSSSSALSLQQILFSRASNHGGDHFRQPPFVSDGFPILFRDVSTDDMSF 60

Query: 61  DATSSVKDDDRNNVAVSVS-ERFRVDGSSGRSGVVEYGLKKE------------------ 120
           DATSSVKDDDRNNVAVSVS ERFRVDGSSGRSGVVEYGLKKE                  
Sbjct: 61  DATSSVKDDDRNNVAVSVSTERFRVDGSSGRSGVVEYGLKKEXXXXXXXXXXXXXXXXXX 120

Query: 121 --EGEGGTR--------GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEG 180
                  TR        G  WRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEG
Sbjct: 121 XXXXXXXTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEG 180

Query: 181 VVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTTSY 187
           VVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTTSY
Sbjct: 181 VVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTTSY 215

[Close]

BLAST of CsGy4G002920 vs. TrEMBL
Match: tr|A0A1S3BYF2|A0A1S3BYF2_CUCME (probable WRKY transcription factor 48 OS=Cucumis melo OX=3656 GN=LOC103494564 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 7.7e-65
Identity = 145/219 (66.21%), Postives = 151/219 (68.95%), Query Frame = 0


Query: 1   MMENFPNFLSTSSSSSALSLQQILFSRASNHGGDHFRQPPFVSDGYPILFRDVSTDDMSF 60
           MMENFPNFLSTSSSSS+LSLQQILFSRAS+H G HFR PP VSDG+P+LFRDVSTDDMSF
Sbjct: 1   MMENFPNFLSTSSSSSSLSLQQILFSRASDHRGHHFRHPPSVSDGFPMLFRDVSTDDMSF 60

Query: 61  DATSSV------KDDDRNNVAVSVSERFRVDGSSGRSGVVEYGLKKEEGEGGTRGG---- 120
           DATSSV                   ERFRVDGSS      E G  +     G RGG    
Sbjct: 61  DATSSVXXXXXXXXXXXXXXXXXXXERFRVDGSSALKKAEEEGEVRAGAMMGERGGGDCD 120

Query: 121 -------------------------LWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQR 180
                                     WRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQR
Sbjct: 121 KKKKMRSRRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQR 180

Query: 181 LTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTT 185
           LTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYT+
Sbjct: 181 LTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTS 219

[Close]

BLAST of CsGy4G002920 vs. TrEMBL
Match: tr|A0A0U1WT51|A0A0U1WT51_HEVBR (WRKY super family protein OS=Hevea brasiliensis OX=3981 GN=WRKY6 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 8.3e-35
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQKAVKNNKFPRSYYRCTHQGC VKKQVQRLTRDEG+VVTTYEG+HSHPIEKS
Sbjct: 123 GYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGIVVTTYEGMHSHPIEKS 182

Query: 169 TDNFEHILSQMQIYTTSY 187
           TDNFEHILSQMQIYTTS+
Sbjct: 183 TDNFEHILSQMQIYTTSF 200

[Close]

BLAST of CsGy4G002920 vs. TrEMBL
Match: tr|A0A140H8M3|A0A140H8M3_MANES (WRKY transcription factor 19 OS=Manihot esculenta OX=3983 GN=MANES_13G009100 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.0e-34
Identity = 70/78 (89.74%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQKAVKNNKFPRSYYRCTHQGC VKKQVQRLTRDEG+VVTTYEG+HSHPIEKS
Sbjct: 116 GYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGIVVTTYEGMHSHPIEKS 175

Query: 169 TDNFEHILSQMQIYTTSY 187
            DNFEHIL+QMQIYTTS+
Sbjct: 176 NDNFEHILTQMQIYTTSF 193

[Close]

BLAST of CsGy4G002920 vs. TrEMBL
Match: tr|S5CKE7|S5CKE7_JATCU (WRKY transcription factor 17 OS=Jatropha curcas OX=180498 GN=WRKY17 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.2e-34
Identity = 69/78 (88.46%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 109 GGLWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKS 168
           G  WRKYGQKAVKNNKFPRSYYRCTHQGC VKKQVQRLTRDEG+V+TTYEG+HSHPIEKS
Sbjct: 143 GYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGIVITTYEGMHSHPIEKS 202

Query: 169 TDNFEHILSQMQIYTTSY 187
           TDNFEHIL+QMQIYT S+
Sbjct: 203 TDNFEHILTQMQIYTNSF 220

The following BLAST results are available for this feature:

BLAST of CsGy4G002920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152302.2	1.2e-85	82.33	PREDICTED: probable WRKY transcription factor 75 [Cucumis sativus] >KGN53043.1 h...	[more]
XP_008454014.1	1.2e-64	66.21	PREDICTED: probable WRKY transcription factor 48 [Cucumis melo]	[more]
XP_022972157.1	1.7e-47	56.54	probable WRKY transcription factor 75 [Cucurbita maxima]	[more]
XP_022932710.1	8.7e-44	55.56	probable WRKY transcription factor 75 [Cucurbita moschata]	[more]
XP_023539084.1	1.9e-43	55.56	probable WRKY transcription factor 75 isoform X1 [Cucurbita pepo subsp. pepo] >A...	[more]

BLAST of CsGy4G002920 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13080.1	1.9e-32	82.89	WRKY DNA-binding protein 75	[more]
AT3G01970.1	2.4e-27	70.27	WRKY DNA-binding protein 45	[more]
AT1G64000.1	3.9e-22	63.89	WRKY DNA-binding protein 56	[more]
AT5G41570.1	1.5e-21	59.21	WRKY DNA-binding protein 24	[more]
AT2G46130.1	1.1e-19	58.33	WRKY DNA-binding protein 43	[more]

BLAST of CsGy4G002920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FYA2\|WRK75_ARATH	3.4e-31	82.89	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 ...	[more]
sp\|Q9S763\|WRK45_ARATH	4.3e-26	70.27	Probable WRKY transcription factor 45 OS=Arabidopsis thaliana OX=3702 GN=WRKY45 ...	[more]
sp\|Q8VWQ4\|WRK56_ARATH	7.0e-21	63.89	Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 ...	[more]
sp\|Q9FFS3\|WRK24_ARATH	2.7e-20	59.21	Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 ...	[more]
sp\|Q8GY11\|WRK43_ARATH	1.9e-18	58.33	Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 ...	[more]

BLAST of CsGy4G002920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KU50\|A0A0A0KU50_CUCSA	7.9e-86	82.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012390 PE=4 SV=1	[more]
tr\|A0A1S3BYF2\|A0A1S3BYF2_CUCME	7.7e-65	66.21	probable WRKY transcription factor 48 OS=Cucumis melo OX=3656 GN=LOC103494564 PE...	[more]
tr\|A0A0U1WT51\|A0A0U1WT51_HEVBR	8.3e-35	92.31	WRKY super family protein OS=Hevea brasiliensis OX=3981 GN=WRKY6 PE=2 SV=1	[more]
tr\|A0A140H8M3\|A0A140H8M3_MANES	7.0e-34	89.74	WRKY transcription factor 19 OS=Manihot esculenta OX=3983 GN=MANES_13G009100 PE=...	[more]
tr\|S5CKE7\|S5CKE7_JATCU	9.2e-34	88.46	WRKY transcription factor 17 OS=Jatropha curcas OX=180498 GN=WRKY17 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036576	WRKY_dom_sf
IPR003657	WRKY_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G002920.1	CsGy4G002920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 111..165 e-value: 1.1E-29 score: 114.6
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 111..164 e-value: 1.2E-23 score: 83.1
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 112..166 score: 25.006
IPR036576	WRKY domain superfamily	GENE3D	G3DSA:2.20.25.80		coord: 100..166 e-value: 3.5E-26 score: 92.7
IPR036576	WRKY domain superfamily	SUPERFAMILY	SSF118290	WRKY DNA-binding domain	coord: 111..165
None	No IPR available	PANTHER	PTHR31221:SF25	WRKY TRANSCRIPTION FACTOR 45-RELATED	coord: 111..184
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 111..184

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G002920	Cla010867	Watermelon (97103) v1	cgybwmB291
CsGy4G002920	Csa4G012390	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G002920	MELO3C017743	Melon (DHL92) v3.5.1	cgybmeB269
CsGy4G002920	ClCG07G015440	Watermelon (Charleston Gray)	cgybwcgB298
CsGy4G002920	CSPI04G03050	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G002920	CmaCh06G016720	Cucurbita maxima (Rimu)	cgybcmaB560
CsGy4G002920	CmoCh14G014930	Cucurbita moschata (Rifu)	cgybcmoB455
CsGy4G002920	Lsi07G000190	Bottle gourd (USVL1VR-Ls)	cgyblsiB277
CsGy4G002920	Cp4.1LG03g12920	Cucurbita pepo (Zucchini)	cgybcpeB552
CsGy4G002920	MELO3C017743.2	Melon (DHL92) v3.6.1	cgybmedB266
CsGy4G002920	CsaV3_4G003030	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G002920	Cla97C07G142410	Watermelon (97103) v2	cgybwmbB299
CsGy4G002920	Bhi01G002150	Wax gourd	cgybwgoB357
CsGy4G002920	Carg15462	Silver-seed gourd	carcgybB0693
CsGy4G002920	Carg06608	Silver-seed gourd	carcgybB0127

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G002920	Cucurbita maxima (Rimu)	cgybcmaB485
CsGy4G002920	Cucurbita moschata (Rifu)	cgybcmoB535
CsGy4G002920	Cucurbita pepo (Zucchini)	cgybcpeB575
CsGy4G002920	Cucumber (Chinese Long) v2	cgybcuB172
CsGy4G002920	Melon (DHL92) v3.6.1	cgybmedB277
CsGy4G002920	Watermelon (97103) v1	cgybwmB333