CsGy4G001360 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G001360
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPentatricopeptide repeat (PPR) superfamily protein
LocationChr4 : 825920 .. 828424 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAAACCCTTCTCTCTCGTATCAATCCCCTCCGCAACTGCAAACCGAAATCATCTCCCCCCTTCTCCATCCCTTTCAGAGGCGAAATCAAGAGGCTTGTTAATGACACCATTCAAATTCTCAAGTCCCACGAGAAATGGGAGCAATCCCTTCAAACCCATTTCACTGAATCCGATATACCCATCATAGACGTTACCCATTTCGTTTTAGACCGAATTAATGATGTAGAACTGGGTTTGAAGTTCTTTGATTGGGCGTCAAAGAATTCCCTCTCCGGTTCTTTAAATGGGACTTCCTACTCTTCGCTGTTAAAGCTACTATCGAGGTTTAGAGTGTTTCCGGAGATTGAGTTCACACTCGAAGAAATGAAAACTAAAGAAACCATCCCGACCCGTGAAGCGTTAAGTGATGTACTATGCGCATATGCGGATGTTGGGTTGGTTGATAAAGCTCTTGAGGTTTATCATGGCGTCGTCAAGTTGCACAACAGTCTTCCAAGTACGTATGCTTGCAATTCCTTGCTTAATTTGCTCGTTAAACACCGTAGGATTGAAACTGCACACCAACTGTATGATGAAATGATTGATAGAGATAATGGGGATGACATTTGTGTGGATAATTATACCACTTCTATCATGGTGAAGGGCTTATGTTTGAAAGGTAGAATTGAGGATGGTATAAAGCTGATTGAATCTAGATGGGGGAAAGGATGTGTACCCAACATTGTGTTTTACAATACACTCATTGATGGATATTGCAAGAAAGGTGAGGTTGAAAGTGCGTATAAACTTTTTAAGAAATTGAAGATGAAAGGATTTATTCCTACGTTACAAACTTTTGGTTCTTTGGTAAATGGTTTTTGCAAGATGGGAATGTTTGAAGCTATTGATCTTCTTTTGTTGGAAATGAAAGACAGGGGCTTGAGTGTAAATGTTCAGATGTATAATAACATTATTGATGCTCGATATAAGCTCGGTTTTGATATTAAAGCAAAGGATACACTTAAAGAAATGTCTGAGAATTGCTGTGAACCAGATCTTGTGACTTATAATACTCTAATAAACCATTTCTGTAGCAGGGGGGAGGTCGAGGAAGCTGAGAAGCTCTTGGAACAAACAATAAGAAGAGGATTGGCACCGAATAAGCTCACTTATACCCCTCTTGTTCATGGGTACTGTAAACAAGGGGAATATACTAAGGCCACAGATTATCTTATTGAGATGTCAACAAGTGGGCTTGAAGTTGATATGATTTCGTATGGAGCTTTAATCCATGGACTTGTTGTTGCAGGGGAAGTCGATACTGCATTGACAATCCGCGACAGAATGATGAACCGAGGAATCTTGCCTGATGCGAATATCTACAATGTTTTGATGAATGGACTTTTCAAGAAAGGGAAACTTTCCATGGCAAAGGTGATGCTTACTGAGATGCTTGACCAAAATATAGCTCCTGATGCATTTGTTTATGCTACTTTAGTGGATGGGTTCATTAGGCATGGCAACCTTGATGAGGCCAAGAAACTCTTTCAGCTCATTATTGAAAAGGGTCTAGACCCCGGTGTTGTTGGATATAATGTCATGATCAAAGGTTTCTCAAAATCTGGGATGATGGACAATGCAATTTTATGCATTGATAAAATGCGGCGTGCACATCATGTTCCTGACATATTTACTTTCTCCACCATAATTGACGGATACGTAAAACAACACAACATGAATGCTGTGCTGAAGATCTTTGGACTGATGGTGAAGCAGAACTGCAAGCCTAACGTTGTTACTTACACCTCTTTGATCAATGGATATTGCCGCAAAGGGGAAACTAAGATGGCTGAAAAACTTTTTAGCATGATGCGATCTCATGGGTTGAAGCCTAGTGTTGTGACATACAGTATACTTATAGGAAGCTTTTGCAAAGAAGCTAAGCTTGGAAAAGCTGTGTCATATTTTGAGCTAATGTTGATTAACAAATGCACTCCTAATGATGCTGCATTTCATTATCTAGTCAATGGGTTTACAAATACAAAAGCTACTGCAGTTTCAAGAGAACCAAATAATCTTCATGAAAATTCCAGATCGATGTTTGAGGACTTCTTTTCGAGAATGATAGGTGATGGATGGACGCAAAAGGCTGCTGCTTACAATTGTATTCTCATTTGCCTTTGTCAGCAAAGAATGGTTAAAACTGCCTTGCAATTGCGCAATAAAATGCTGGCTTTTGGACTTTGTTCTGATGCTGTTTCTTTTGTTGCATTGATACATGGCATTTGCTTGGAAGGAAACTCAAAAGAGTGGAGGAACATGATTTCTTGTGATTTGAATGAAGGAGAACTTCAAATTGCCTTGAAATACTCACTTGAACTAGACAAGTTCATACCTGAGGGAGGTATTTCTGAGGCTTCAGGCATTTTGCAGGCTATGATTAAGGGTTACGTGTCTCCTAATCAGGATTTGAACAATTTGAAGGAGCCAAATATGGAGAATGGTAAGGAACTGAGATAG

mRNA sequence

ATGTCTAAAACCCTTCTCTCTCGTATCAATCCCCTCCGCAACTGCAAACCGAAATCATCTCCCCCCTTCTCCATCCCTTTCAGAGGCGAAATCAAGAGGCTTGTTAATGACACCATTCAAATTCTCAAGTCCCACGAGAAATGGGAGCAATCCCTTCAAACCCATTTCACTGAATCCGATATACCCATCATAGACGTTACCCATTTCGTTTTAGACCGAATTAATGATGTAGAACTGGGTTTGAAGTTCTTTGATTGGGCGTCAAAGAATTCCCTCTCCGGTTCTTTAAATGGGACTTCCTACTCTTCGCTGTTAAAGCTACTATCGAGGTTTAGAGTGTTTCCGGAGATTGAGTTCACACTCGAAGAAATGAAAACTAAAGAAACCATCCCGACCCGTGAAGCGTTAAGTGATGTACTATGCGCATATGCGGATGTTGGGTTGGTTGATAAAGCTCTTGAGGTTTATCATGGCGTCGTCAAGTTGCACAACAGTCTTCCAAGTACGTATGCTTGCAATTCCTTGCTTAATTTGCTCGTTAAACACCGTAGGATTGAAACTGCACACCAACTGTATGATGAAATGATTGATAGAGATAATGGGGATGACATTTGTGTGGATAATTATACCACTTCTATCATGGTGAAGGGCTTATGTTTGAAAGGTAGAATTGAGGATGGTATAAAGCTGATTGAATCTAGATGGGGGAAAGGATGTGTACCCAACATTGTGTTTTACAATACACTCATTGATGGATATTGCAAGAAAGGTGAGGTTGAAAGTGCGTATAAACTTTTTAAGAAATTGAAGATGAAAGGATTTATTCCTACGTTACAAACTTTTGGTTCTTTGGTAAATGGTTTTTGCAAGATGGGAATGTTTGAAGCTATTGATCTTCTTTTGTTGGAAATGAAAGACAGGGGCTTGAGTGTAAATGTTCAGATGTATAATAACATTATTGATGCTCGATATAAGCTCGGTTTTGATATTAAAGCAAAGGATACACTTAAAGAAATGTCTGAGAATTGCTGTGAACCAGATCTTGTGACTTATAATACTCTAATAAACCATTTCTGTAGCAGGGGGGAGGTCGAGGAAGCTGAGAAGCTCTTGGAACAAACAATAAGAAGAGGATTGGCACCGAATAAGCTCACTTATACCCCTCTTGTTCATGGGTACTGTAAACAAGGGGAATATACTAAGGCCACAGATTATCTTATTGAGATGTCAACAAGTGGGCTTGAAGTTGATATGATTTCGTATGGAGCTTTAATCCATGGACTTGTTGTTGCAGGGGAAGTCGATACTGCATTGACAATCCGCGACAGAATGATGAACCGAGGAATCTTGCCTGATGCGAATATCTACAATGTTTTGATGAATGGACTTTTCAAGAAAGGGAAACTTTCCATGGCAAAGGTGATGCTTACTGAGATGCTTGACCAAAATATAGCTCCTGATGCATTTGTTTATGCTACTTTAGTGGATGGGTTCATTAGGCATGGCAACCTTGATGAGGCCAAGAAACTCTTTCAGCTCATTATTGAAAAGGGTCTAGACCCCGGTGTTGTTGGATATAATGTCATGATCAAAGGTTTCTCAAAATCTGGGATGATGGACAATGCAATTTTATGCATTGATAAAATGCGGCGTGCACATCATGTTCCTGACATATTTACTTTCTCCACCATAATTGACGGATACGTAAAACAACACAACATGAATGCTGTGCTGAAGATCTTTGGACTGATGGTGAAGCAGAACTGCAAGCCTAACGTTGTTACTTACACCTCTTTGATCAATGGATATTGCCGCAAAGGGGAAACTAAGATGGCTGAAAAACTTTTTAGCATGATGCGATCTCATGGGTTGAAGCCTAGTGTTGTGACATACAGTATACTTATAGGAAGCTTTTGCAAAGAAGCTAAGCTTGGAAAAGCTGTGTCATATTTTGAGCTAATGTTGATTAACAAATGCACTCCTAATGATGCTGCATTTCATTATCTAGTCAATGGGTTTACAAATACAAAAGCTACTGCAGTTTCAAGAGAACCAAATAATCTTCATGAAAATTCCAGATCGATGTTTGAGGACTTCTTTTCGAGAATGATAGGTGATGGATGGACGCAAAAGGCTGCTGCTTACAATTGTATTCTCATTTGCCTTTGTCAGCAAAGAATGGTTAAAACTGCCTTGCAATTGCGCAATAAAATGCTGGCTTTTGGACTTTGTTCTGATGCTGTTTCTTTTGTTGCATTGATACATGGCATTTGCTTGGAAGGAAACTCAAAAGAGTGGAGGAACATGATTTCTTGTGATTTGAATGAAGGAGAACTTCAAATTGCCTTGAAATACTCACTTGAACTAGACAAGTTCATACCTGAGGGAGGTATTTCTGAGGCTTCAGGCATTTTGCAGGCTATGATTAAGGGTTACGTGTCTCCTAATCAGGATTTGAACAATTTGAAGGAGCCAAATATGGAGAATGGTAAGGAACTGAGATAG

Coding sequence (CDS)

ATGTCTAAAACCCTTCTCTCTCGTATCAATCCCCTCCGCAACTGCAAACCGAAATCATCTCCCCCCTTCTCCATCCCTTTCAGAGGCGAAATCAAGAGGCTTGTTAATGACACCATTCAAATTCTCAAGTCCCACGAGAAATGGGAGCAATCCCTTCAAACCCATTTCACTGAATCCGATATACCCATCATAGACGTTACCCATTTCGTTTTAGACCGAATTAATGATGTAGAACTGGGTTTGAAGTTCTTTGATTGGGCGTCAAAGAATTCCCTCTCCGGTTCTTTAAATGGGACTTCCTACTCTTCGCTGTTAAAGCTACTATCGAGGTTTAGAGTGTTTCCGGAGATTGAGTTCACACTCGAAGAAATGAAAACTAAAGAAACCATCCCGACCCGTGAAGCGTTAAGTGATGTACTATGCGCATATGCGGATGTTGGGTTGGTTGATAAAGCTCTTGAGGTTTATCATGGCGTCGTCAAGTTGCACAACAGTCTTCCAAGTACGTATGCTTGCAATTCCTTGCTTAATTTGCTCGTTAAACACCGTAGGATTGAAACTGCACACCAACTGTATGATGAAATGATTGATAGAGATAATGGGGATGACATTTGTGTGGATAATTATACCACTTCTATCATGGTGAAGGGCTTATGTTTGAAAGGTAGAATTGAGGATGGTATAAAGCTGATTGAATCTAGATGGGGGAAAGGATGTGTACCCAACATTGTGTTTTACAATACACTCATTGATGGATATTGCAAGAAAGGTGAGGTTGAAAGTGCGTATAAACTTTTTAAGAAATTGAAGATGAAAGGATTTATTCCTACGTTACAAACTTTTGGTTCTTTGGTAAATGGTTTTTGCAAGATGGGAATGTTTGAAGCTATTGATCTTCTTTTGTTGGAAATGAAAGACAGGGGCTTGAGTGTAAATGTTCAGATGTATAATAACATTATTGATGCTCGATATAAGCTCGGTTTTGATATTAAAGCAAAGGATACACTTAAAGAAATGTCTGAGAATTGCTGTGAACCAGATCTTGTGACTTATAATACTCTAATAAACCATTTCTGTAGCAGGGGGGAGGTCGAGGAAGCTGAGAAGCTCTTGGAACAAACAATAAGAAGAGGATTGGCACCGAATAAGCTCACTTATACCCCTCTTGTTCATGGGTACTGTAAACAAGGGGAATATACTAAGGCCACAGATTATCTTATTGAGATGTCAACAAGTGGGCTTGAAGTTGATATGATTTCGTATGGAGCTTTAATCCATGGACTTGTTGTTGCAGGGGAAGTCGATACTGCATTGACAATCCGCGACAGAATGATGAACCGAGGAATCTTGCCTGATGCGAATATCTACAATGTTTTGATGAATGGACTTTTCAAGAAAGGGAAACTTTCCATGGCAAAGGTGATGCTTACTGAGATGCTTGACCAAAATATAGCTCCTGATGCATTTGTTTATGCTACTTTAGTGGATGGGTTCATTAGGCATGGCAACCTTGATGAGGCCAAGAAACTCTTTCAGCTCATTATTGAAAAGGGTCTAGACCCCGGTGTTGTTGGATATAATGTCATGATCAAAGGTTTCTCAAAATCTGGGATGATGGACAATGCAATTTTATGCATTGATAAAATGCGGCGTGCACATCATGTTCCTGACATATTTACTTTCTCCACCATAATTGACGGATACGTAAAACAACACAACATGAATGCTGTGCTGAAGATCTTTGGACTGATGGTGAAGCAGAACTGCAAGCCTAACGTTGTTACTTACACCTCTTTGATCAATGGATATTGCCGCAAAGGGGAAACTAAGATGGCTGAAAAACTTTTTAGCATGATGCGATCTCATGGGTTGAAGCCTAGTGTTGTGACATACAGTATACTTATAGGAAGCTTTTGCAAAGAAGCTAAGCTTGGAAAAGCTGTGTCATATTTTGAGCTAATGTTGATTAACAAATGCACTCCTAATGATGCTGCATTTCATTATCTAGTCAATGGGTTTACAAATACAAAAGCTACTGCAGTTTCAAGAGAACCAAATAATCTTCATGAAAATTCCAGATCGATGTTTGAGGACTTCTTTTCGAGAATGATAGGTGATGGATGGACGCAAAAGGCTGCTGCTTACAATTGTATTCTCATTTGCCTTTGTCAGCAAAGAATGGTTAAAACTGCCTTGCAATTGCGCAATAAAATGCTGGCTTTTGGACTTTGTTCTGATGCTGTTTCTTTTGTTGCATTGATACATGGCATTTGCTTGGAAGGAAACTCAAAAGAGTGGAGGAACATGATTTCTTGTGATTTGAATGAAGGAGAACTTCAAATTGCCTTGAAATACTCACTTGAACTAGACAAGTTCATACCTGAGGGAGGTATTTCTGAGGCTTCAGGCATTTTGCAGGCTATGATTAAGGGTTACGTGTCTCCTAATCAGGATTTGAACAATTTGAAGGAGCCAAATATGGAGAATGGTAAGGAACTGAGATAG

Protein sequence

MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESDIPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR
Homology
[Close]
BLAST of CsGy4G001360 vs. NCBI nr
Match: XP_004152354.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g52620 isoform X1 [Cucumis sativus] >KGN52880.1 hypothetical protein Csa_4G004900 [Cucumis sativus])

HSP 1 Score: 658.3 bits (1697), Expect = 3.5e-185
Identity = 834/834 (100.00%), Postives = 834/834 (100.00%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD
Sbjct: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120
           IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT
Sbjct: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120

Query: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
           LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240
           KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240

Query: 241 PNIVFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           PNIVFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PNIVFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660

Query: 661 XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 720
           XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI
Sbjct: 661 XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 720

Query: 721 CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ 780
           CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ
Sbjct: 721 CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ 780

Query: 781 IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR 835
           IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR
Sbjct: 781 IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR 834

[Close]
BLAST of CsGy4G001360 vs. NCBI nr
Match: XP_008454246.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g52620 [Cucumis melo])

HSP 1 Score: 584.3 bits (1505), Expect = 6.4e-163
Identity = 799/834 (95.80%), Postives = 811/834 (97.24%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSKTLLSRI  LRNCKPKSS PFS   RG+IKRLVND+IQILKSHE+WEQSLQTHFTESD
Sbjct: 1   MSKTLLSRIETLRNCKPKSSSPFSSHLRGDIKRLVNDSIQILKSHEQWEQSLQTHFTESD 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120
           IPIIDVTHFVLDRI+DVELGLKFFDWASKNS SGSLNGTSYSSLLKLLSRFRVFPEIEFT
Sbjct: 61  IPIIDVTHFVLDRIDDVELGLKFFDWASKNSPSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120

Query: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
           LEEMKTKETIPTREALS+VLCAY DVG VDKALEVYHGV KLHNSLPS YACNSLLNLLV
Sbjct: 121 LEEMKTKETIPTREALSNVLCAYVDVGSVDKALEVYHGVAKLHNSLPSLYACNSLLNLLV 180

Query: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240
           KHRR ETAHQLYDEM+DRDNGD I VD YTT IMV+GLCL+GRIEDG KLIESRWGKGCV
Sbjct: 181 KHRRFETAHQLYDEMVDRDNGDGIHVDYYTTCIMVRGLCLEGRIEDGRKLIESRWGKGCV 240

Query: 241 PNIVFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           PNIVFYN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PNIVFYNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660

Query: 661 XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 720
           XXXXXXXXXXXXXXNTKATAVS  PNNL ENSRSMFEDFFSRMIGDGWT+KAAAYNCILI
Sbjct: 661 XXXXXXXXXXXXXXNTKATAVSGGPNNLRENSRSMFEDFFSRMIGDGWTRKAAAYNCILI 720

Query: 721 CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ 780
           CLCQQRMVKTALQLRNKML+ GLCSDAVSFVAL+HGICLEGNSKEWRN+ISCDLNEGELQ
Sbjct: 721 CLCQQRMVKTALQLRNKMLSLGLCSDAVSFVALMHGICLEGNSKEWRNIISCDLNEGELQ 780

Query: 781 IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR 835
           IALKYSLELDKFI EGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR
Sbjct: 781 IALKYSLELDKFITEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR 834

[Close]
BLAST of CsGy4G001360 vs. NCBI nr
Match: XP_011652970.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g52620 isoform X2 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 1.4e-133
Identity = 540/834 (64.75%), Postives = 551/834 (66.07%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD
Sbjct: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120
           IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT
Sbjct: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120

Query: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
           LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLP             
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLP------------- 180

Query: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240
             R ++TA  + D M++R     I  D    ++++ GL  KG++                
Sbjct: 181 --REVDTALTIRDRMMNR----GILPDANIYNVLMNGLFKKGKLS--------------- 240

Query: 241 PNIVFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                                                                       
Sbjct: 361 ------------------------------------------------------------ 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
                                                                XXXXXXX
Sbjct: 421 --------------------------------------------------MAKXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 570

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 570

Query: 661 XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 720
           XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI
Sbjct: 661 XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 570

Query: 721 CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ 780
           CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ
Sbjct: 721 CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ 570

Query: 781 IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR 835
           IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR
Sbjct: 781 IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR 570

[Close]
BLAST of CsGy4G001360 vs. NCBI nr
Match: XP_022153568.1 (pentatricopeptide repeat-containing protein At1g52620 [Momordica charantia])

HSP 1 Score: 478.4 bits (1230), Expect = 4.9e-131
Identity = 739/823 (89.79%), Postives = 776/823 (94.29%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSK LLSRI PLRN KPK S PFS P + +IK+LVNDTI+ILKSHEKWEQSL+T F ESD
Sbjct: 1   MSKALLSRIKPLRNLKPKPSSPFSFPLKCDIKKLVNDTIKILKSHEKWEQSLETQFNESD 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120
           IP+ID++HFVLDRI+DVELGLKFFDWASKNS S SLNG++YSSLLKLLSRFRVFPEIEFT
Sbjct: 61  IPVIDISHFVLDRIDDVELGLKFFDWASKNSSSCSLNGSAYSSLLKLLSRFRVFPEIEFT 120

Query: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
           LE+M+TKE +PTR+ALS+VLCAYAD+G VDKAL  YHGVVKLHNSLPSTYACNSLLNLLV
Sbjct: 121 LEDMRTKEIVPTRDALSNVLCAYADLGFVDKALVFYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240
           KHRR+ TAHQLYDEM+ RDNGDD C DNYTT IMV+GLCL+GR EDG KLIESRWGKGCV
Sbjct: 181 KHRRLGTAHQLYDEMVKRDNGDDKCTDNYTTCIMVRGLCLEGRTEDGRKLIESRWGKGCV 240

Query: 241 PNIVFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           PNIVFYN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PNIVFYNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660

Query: 661 XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 720
           XXXXXXXXXXXX  N  A AVS+  NN  EN++SMFE+FF RMIGDGWT+KAAAYNCILI
Sbjct: 661 XXXXXXXXXXXXFANMNAAAVSKGLNNFSENAKSMFEEFFLRMIGDGWTRKAAAYNCILI 720

Query: 721 CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ 780
           CLCQ RMVKTALQLR+KML+ GLC DAVSF ALIHGICL G+SKE +N+ISC L+E EL+
Sbjct: 721 CLCQHRMVKTALQLRDKMLSLGLCPDAVSFAALIHGICLGGSSKECKNVISCYLSEKELR 780

Query: 781 IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLK 824
           IALKYSLELDK I +GGISEAS ILQAM++ Y SPNQDLN+LK
Sbjct: 781 IALKYSLELDKSITQGGISEASDILQAMVEDYESPNQDLNSLK 823

[Close]
BLAST of CsGy4G001360 vs. NCBI nr
Match: XP_021830199.1 (pentatricopeptide repeat-containing protein At1g52620 [Prunus avium] >XP_021830200.1 pentatricopeptide repeat-containing protein At1g52620 [Prunus avium])

HSP 1 Score: 302.8 bits (774), Expect = 3.7e-78
Identity = 151/247 (61.13%), Postives = 191/247 (77.33%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSKTLLSRI PL N KP S    S P    IKRLVNDTIQIL++ ++WEQSL T F+E++
Sbjct: 1   MSKTLLSRIKPLHNPKPASLSSSSPP---HIKRLVNDTIQILRADDQWEQSLATQFSETE 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120
             + DV HFVLDRI+DVELGLKFFDWA K     S +G +YSSLLKLL+RF+V  EIE  
Sbjct: 61  TLVSDVAHFVLDRIHDVELGLKFFDWAFKRPYCCSPDGFAYSSLLKLLARFKVLSEIELV 120

Query: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
           +E+MK +E  PT +ALS VL AYAD GLVDKAL+ Y  VVK+++ +P  +ACN+LLN+LV
Sbjct: 121 MEQMKFEEVKPTIDALSFVLRAYADSGLVDKALDFYCFVVKVYDCVPDVFACNTLLNVLV 180

Query: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240
           K+RR++ AH++YDEM ++  GD +C+DNY+T IMVKGLC  G++E+G KLIE RWG+ CV
Sbjct: 181 KNRRVDVAHRVYDEMAEKGGGDHVCMDNYSTCIMVKGLCKAGKVEEGRKLIEDRWGESCV 240

Query: 241 PNIVFYN 248
           PN+VFYN
Sbjct: 241 PNVVFYN 244

[Close]
BLAST of CsGy4G001360 vs. TAIR10
Match: AT1G52620.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 244.2 bits (622), Expect = 2.8e-64
Identity = 128/248 (51.61%), Postives = 169/248 (68.15%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSKTLLSRI PL N    +S    +P    IK+LV+DT+ ILK+ + W Q L   F + +
Sbjct: 1   MSKTLLSRIKPLSNPHASNSFRSHLPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEE 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSL-NGTSYSSLLKLLSRFRVFPEIEF 120
           +  +D++ FV DRI DVE+G+K FDW S         NG + SS LKLL+R+R+F EIE 
Sbjct: 61  VRFVDISPFVFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIED 120

Query: 121 TLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLL 180
            L  ++ +    T EALS VL AYA+ G + KA+E+Y  VV+L++S+P   ACNSLL+LL
Sbjct: 121 VLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLL 180

Query: 181 VKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGC 240
           VK RR+  A ++YDEM DR  GD   VDNY+T I+VKG+C +G++E G KLIE RWGKGC
Sbjct: 181 VKSRRLGDARKVYDEMCDR--GDS--VDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGC 240

Query: 241 VPNIVFYN 248
           +PNIVFYN
Sbjct: 241 IPNIVFYN 244

[Close]
BLAST of CsGy4G001360 vs. TAIR10
Match: AT2G17525.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-09
Identity = 55/184 (29.89%), Postives = 85/184 (46.20%), Query Frame = 0 

Query: 66  VTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTS-YSSLLKLLSRFRVFPEIEFTLEEM 125
           +   +LD+       L+ F WAS  +  G ++  S Y +L   L  FR F  +   L+EM
Sbjct: 46  IVRLILDQ-KSASGALETFRWAS--TFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEM 105

Query: 126 KTKETIPTREAL-SDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHR 185
                +P  +A+   ++  +    L+ + + V   V K     PS    NS+L++LVK  
Sbjct: 106 PDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKF-GIKPSLKVFNSILDVLVK-E 165

Query: 186 RIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNI 245
            I+ A + +   +       I  D YT  I++KGL L  RI DG KL++     G  PN 
Sbjct: 166 DIDIAREFFTRKM---MASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNA 221

Query: 246 VFYN 248
           V YN
Sbjct: 226 VVYN 221

[Close]
BLAST of CsGy4G001360 vs. TAIR10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 2.2e-08
Identity = 43/153 (28.10%), Postives = 80/153 (52.29%), Query Frame = 0 

Query: 83  FFDWASKNSLSGSL-NGTSYSSLLKLLSRFRVFPEIEFTLEEMKTKE--TIPTREALSDV 142
           FF WA  NS +G + +G +Y++++ +L + R F  +   + EM   E   + T + +S V
Sbjct: 152 FFIWA--NSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKV 211

Query: 143 LCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRD 202
           +   A  G  +KA++ +  + K +     T A NSL++ LVK   IE AH+++ ++    
Sbjct: 212 MRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF--- 271

Query: 203 NGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIE 233
             D I  D  T +I++ G C   + +D   +++
Sbjct: 272 --DTIKPDARTFNILIHGFCKARKFDDARAMMD 297

[Close]
BLAST of CsGy4G001360 vs. TAIR10
Match: AT1G02060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.0e-05
Identity = 35/119 (29.41%), Postives = 59/119 (49.58%), Query Frame = 0 

Query: 80  GLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFR---VFPEIEFTLEEMKTKETIPTREAL 139
           GL+FFDW S    S      S+  +L+ L R R   V     F++E              
Sbjct: 84  GLRFFDWVSNKGFSH--KEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYF 143

Query: 140 SDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEM 196
           + ++ +Y + GL  ++++++  + ++  S PS    NSLL++L+K  R   AH L+DEM
Sbjct: 144 NSLIRSYGNAGLFQESVKLFQTMKQMGIS-PSVLTFNSLLSILLKRGRTGMAHDLFDEM 199

[Close]
BLAST of CsGy4G001360 vs. TAIR10
Match: AT2G26790.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 47.8 bits (112), Expect = 3.9e-05
Identity = 47/205 (22.93%), Postives = 88/205 (42.93%), Query Frame = 0 

Query: 49  EQSLQTHFTESDIPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLL 108
           EQ    H   S +    +   +    +D  L L F     ++ +S ++N  +Y++L+++L
Sbjct: 42  EQQQVNHLNLSKLTQHGLQRLLNSTRDDPNLALSFLRQLKEHGVSPNVN--AYATLVRIL 101

Query: 109 SR---------------------FRVFPEIEFTLEEMKTKETIPTREALSDVLC-AYADV 168
           +                      F V   IE   E+ + K+       +S  L  AY  +
Sbjct: 102 TTWGLDIKLDSVLVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSL 161

Query: 169 GLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICV 228
           G+ D+A +V     +L + +    ACN L+N + +  +I     L+ ++        +C 
Sbjct: 162 GMFDEATDVLFQSKRL-DCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQL----GLCA 221

Query: 229 DNYTTSIMVKGLCLKGRIEDGIKLI 232
           + YT +I+VK LC KG +E+   L+
Sbjct: 222 NEYTYAIVVKALCRKGNLEEAAMLL 239

[Close]
BLAST of CsGy4G001360 vs. Swiss-Prot
Match: sp|Q9SSR4|PPR77_ARATH (Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana OX=3702 GN=At1g52620 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 5.1e-63
Identity = 128/248 (51.61%), Postives = 169/248 (68.15%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSKTLLSRI PL N    +S    +P    IK+LV+DT+ ILK+ + W Q L   F + +
Sbjct: 1   MSKTLLSRIKPLSNPHASNSFRSHLPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEE 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSL-NGTSYSSLLKLLSRFRVFPEIEF 120
           +  +D++ FV DRI DVE+G+K FDW S         NG + SS LKLL+R+R+F EIE 
Sbjct: 61  VRFVDISPFVFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIED 120

Query: 121 TLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLL 180
            L  ++ +    T EALS VL AYA+ G + KA+E+Y  VV+L++S+P   ACNSLL+LL
Sbjct: 121 VLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLL 180

Query: 181 VKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGC 240
           VK RR+  A ++YDEM DR  GD   VDNY+T I+VKG+C +G++E G KLIE RWGKGC
Sbjct: 181 VKSRRLGDARKVYDEMCDR--GDS--VDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGC 240

Query: 241 VPNIVFYN 248
           +PNIVFYN
Sbjct: 241 IPNIVFYN 244

[Close]
BLAST of CsGy4G001360 vs. Swiss-Prot
Match: sp|Q84VG6|PP160_ARATH (Pentatricopeptide repeat-containing protein At2g17525, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g17525 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-08
Identity = 55/184 (29.89%), Postives = 85/184 (46.20%), Query Frame = 0 

Query: 66  VTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTS-YSSLLKLLSRFRVFPEIEFTLEEM 125
           +   +LD+       L+ F WAS  +  G ++  S Y +L   L  FR F  +   L+EM
Sbjct: 46  IVRLILDQ-KSASGALETFRWAS--TFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEM 105

Query: 126 KTKETIPTREAL-SDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHR 185
                +P  +A+   ++  +    L+ + + V   V K     PS    NS+L++LVK  
Sbjct: 106 PDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKF-GIKPSLKVFNSILDVLVK-E 165

Query: 186 RIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNI 245
            I+ A + +   +       I  D YT  I++KGL L  RI DG KL++     G  PN 
Sbjct: 166 DIDIAREFFTRKM---MASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNA 221

Query: 246 VFYN 248
           V YN
Sbjct: 226 VVYN 221

[Close]
BLAST of CsGy4G001360 vs. Swiss-Prot
Match: sp|Q9LUJ4|PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.0e-07
Identity = 43/153 (28.10%), Postives = 80/153 (52.29%), Query Frame = 0 

Query: 83  FFDWASKNSLSGSL-NGTSYSSLLKLLSRFRVFPEIEFTLEEMKTKE--TIPTREALSDV 142
           FF WA  NS +G + +G +Y++++ +L + R F  +   + EM   E   + T + +S V
Sbjct: 152 FFIWA--NSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKV 211

Query: 143 LCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRD 202
           +   A  G  +KA++ +  + K +     T A NSL++ LVK   IE AH+++ ++    
Sbjct: 212 MRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF--- 271

Query: 203 NGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIE 233
             D I  D  T +I++ G C   + +D   +++
Sbjct: 272 --DTIKPDARTFNILIHGFCKARKFDDARAMMD 297

[Close]
BLAST of CsGy4G001360 vs. Swiss-Prot
Match: sp|O81908|PPR2_ARATH (Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g02060 PE=2 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-04
Identity = 35/119 (29.41%), Postives = 59/119 (49.58%), Query Frame = 0 

Query: 80  GLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFR---VFPEIEFTLEEMKTKETIPTREAL 139
           GL+FFDW S    S      S+  +L+ L R R   V     F++E              
Sbjct: 84  GLRFFDWVSNKGFSH--KEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYF 143

Query: 140 SDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEM 196
           + ++ +Y + GL  ++++++  + ++  S PS    NSLL++L+K  R   AH L+DEM
Sbjct: 144 NSLIRSYGNAGLFQESVKLFQTMKQMGIS-PSVLTFNSLLSILLKRGRTGMAHDLFDEM 199

[Close]
BLAST of CsGy4G001360 vs. Swiss-Prot
Match: sp|O81028|PP171_ARATH (Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g26790 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 7.1e-04
Identity = 47/205 (22.93%), Postives = 88/205 (42.93%), Query Frame = 0 

Query: 49  EQSLQTHFTESDIPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLL 108
           EQ    H   S +    +   +    +D  L L F     ++ +S ++N  +Y++L+++L
Sbjct: 42  EQQQVNHLNLSKLTQHGLQRLLNSTRDDPNLALSFLRQLKEHGVSPNVN--AYATLVRIL 101

Query: 109 SR---------------------FRVFPEIEFTLEEMKTKETIPTREALSDVLC-AYADV 168
           +                      F V   IE   E+ + K+       +S  L  AY  +
Sbjct: 102 TTWGLDIKLDSVLVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSL 161

Query: 169 GLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICV 228
           G+ D+A +V     +L + +    ACN L+N + +  +I     L+ ++        +C 
Sbjct: 162 GMFDEATDVLFQSKRL-DCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQL----GLCA 221

Query: 229 DNYTTSIMVKGLCLKGRIEDGIKLI 232
           + YT +I+VK LC KG +E+   L+
Sbjct: 222 NEYTYAIVVKALCRKGNLEEAAMLL 239

[Close]
BLAST of CsGy4G001360 vs. TrEMBL
Match: tr|A0A0A0KTD1|A0A0A0KTD1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004900 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 2.3e-185
Identity = 834/834 (100.00%), Postives = 834/834 (100.00%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD
Sbjct: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120
           IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT
Sbjct: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120

Query: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
           LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240
           KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240

Query: 241 PNIVFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           PNIVFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PNIVFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660

Query: 661 XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 720
           XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI
Sbjct: 661 XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 720

Query: 721 CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ 780
           CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ
Sbjct: 721 CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ 780

Query: 781 IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR 835
           IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR
Sbjct: 781 IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR 834

[Close]
BLAST of CsGy4G001360 vs. TrEMBL
Match: tr|A0A1S3BYA4|A0A1S3BYA4_CUCME (pentatricopeptide repeat-containing protein At1g52620 OS=Cucumis melo OX=3656 GN=LOC103494710 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 4.2e-163
Identity = 799/834 (95.80%), Postives = 811/834 (97.24%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSKTLLSRI  LRNCKPKSS PFS   RG+IKRLVND+IQILKSHE+WEQSLQTHFTESD
Sbjct: 1   MSKTLLSRIETLRNCKPKSSSPFSSHLRGDIKRLVNDSIQILKSHEQWEQSLQTHFTESD 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120
           IPIIDVTHFVLDRI+DVELGLKFFDWASKNS SGSLNGTSYSSLLKLLSRFRVFPEIEFT
Sbjct: 61  IPIIDVTHFVLDRIDDVELGLKFFDWASKNSPSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120

Query: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
           LEEMKTKETIPTREALS+VLCAY DVG VDKALEVYHGV KLHNSLPS YACNSLLNLLV
Sbjct: 121 LEEMKTKETIPTREALSNVLCAYVDVGSVDKALEVYHGVAKLHNSLPSLYACNSLLNLLV 180

Query: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240
           KHRR ETAHQLYDEM+DRDNGD I VD YTT IMV+GLCL+GRIEDG KLIESRWGKGCV
Sbjct: 181 KHRRFETAHQLYDEMVDRDNGDGIHVDYYTTCIMVRGLCLEGRIEDGRKLIESRWGKGCV 240

Query: 241 PNIVFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           PNIVFYN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PNIVFYNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660

Query: 661 XXXXXXXXXXXXXXNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 720
           XXXXXXXXXXXXXXNTKATAVS  PNNL ENSRSMFEDFFSRMIGDGWT+KAAAYNCILI
Sbjct: 661 XXXXXXXXXXXXXXNTKATAVSGGPNNLRENSRSMFEDFFSRMIGDGWTRKAAAYNCILI 720

Query: 721 CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQ 780
           CLCQQRMVKTALQLRNKML+ GLCSDAVSFVAL+HGICLEGNSKEWRN+ISCDLNEGELQ
Sbjct: 721 CLCQQRMVKTALQLRNKMLSLGLCSDAVSFVALMHGICLEGNSKEWRNIISCDLNEGELQ 780

Query: 781 IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR 835
           IALKYSLELDKFI EGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR
Sbjct: 781 IALKYSLELDKFITEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR 834

[Close]
BLAST of CsGy4G001360 vs. TrEMBL
Match: tr|A0A251PX80|A0A251PX80_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G082900 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 7.2e-78
Identity = 151/247 (61.13%), Postives = 190/247 (76.92%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSKTLLSRI PL N KP S    S P    IKRLVNDTIQIL++ ++WEQSL T F+E++
Sbjct: 1   MSKTLLSRIKPLHNPKPASLSSSSPP---HIKRLVNDTIQILRADDQWEQSLATQFSETE 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120
             + DV HFVLDRI+DVELGLKFFDWA K     S +G +YSSLLKLL+RFRV  EIE  
Sbjct: 61  TLVSDVAHFVLDRIHDVELGLKFFDWAFKRPYCCSPDGFAYSSLLKLLARFRVLSEIELV 120

Query: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
           +E+MK +E  PT +ALS V+ AYAD GLVDKALE Y  VVK+++ +P  +ACN+LLN+LV
Sbjct: 121 MEQMKFEEVKPTIDALSFVIRAYADSGLVDKALEFYCFVVKVYDCVPDVFACNTLLNVLV 180

Query: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240
           K+RR++ A ++YDEM ++  GD +C+DNY+T IMVKGLC  G++E+G KLIE RWG+ CV
Sbjct: 181 KNRRVDVARRVYDEMAEKGGGDHVCMDNYSTCIMVKGLCKAGKVEEGRKLIEDRWGESCV 240

Query: 241 PNIVFYN 248
           PN+VFYN
Sbjct: 241 PNVVFYN 244

[Close]
BLAST of CsGy4G001360 vs. TrEMBL
Match: tr|A0A2P4HCQ7|A0A2P4HCQ7_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_47758 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.3e-75
Identity = 149/247 (60.32%), Postives = 192/247 (77.73%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSKTLLSRI PL N KP SS   ++PFR   K  V  TIQILK+ ++WEQSL++ F+ES+
Sbjct: 1   MSKTLLSRIKPLHNRKPTSSSS-TLPFRHFAKH-VQGTIQILKTQDQWEQSLESFFSESN 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120
           + + D  HFVLDRI+DVELGLKFFDWASK   S SLNG++YSSLL LL+RF+VF EIE  
Sbjct: 61  VVVSDFAHFVLDRIHDVELGLKFFDWASKRPYSCSLNGSAYSSLLILLARFKVFLEIELV 120

Query: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
           LE MK ++  P  EALS V+ AYAD GLVDKA+E+Y+ V ++HN +PS +ACNSLLN+LV
Sbjct: 121 LERMKLEQLNPACEALSVVIQAYADSGLVDKAVELYYVVGEIHNCVPSVFACNSLLNVLV 180

Query: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240
           KH+R ETA Q+Y++M++       CVDNY+T IMV+GLC  G++++G +LIE RWG+GC+
Sbjct: 181 KHQRNETACQVYNKMLENS-----CVDNYSTCIMVRGLCRDGKVKEGRELIEDRWGEGCI 240

Query: 241 PNIVFYN 248
           PN+VFYN
Sbjct: 241 PNVVFYN 240

[Close]
BLAST of CsGy4G001360 vs. TrEMBL
Match: tr|F6HXB8|F6HXB8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g06530 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 9.1e-73
Identity = 140/247 (56.68%), Postives = 179/247 (72.47%), Query Frame = 0 

Query: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60
           MSKTLL  I      K K +PP     +  I  LV D +++L +H +WE++LQT F+ES+
Sbjct: 1   MSKTLLCLI----KSKAKPTPPSKPSLKPRINNLVKDILEVLHTHNQWEENLQTRFSESE 60

Query: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120
           +   DV H VLDRI DVELGLKFFDW S+   SG +NG +YSSLLKLL+R RVF E+E  
Sbjct: 61  VLASDVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVV 120

Query: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
           LE M+ +E  PTREA+S V+ AY+D GLV+KALE+Y+ V+K +   P   ACNSLLN+LV
Sbjct: 121 LENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLV 180

Query: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240
           K  RIE A +LYDEM++ D   D CVDNY+T IMVKGLC +G++E+G KLIE RWG+GC+
Sbjct: 181 KLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCI 240

Query: 241 PNIVFYN 248
           PNI+FYN
Sbjct: 241 PNIIFYN 243

The following BLAST results are available for this feature:
BLAST of CsGy4G001360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152354.13.5e-185100.00PREDICTED: pentatricopeptide repeat-containing protein At1g52620 isoform X1 [Cuc... [more]
XP_008454246.16.4e-16395.80PREDICTED: pentatricopeptide repeat-containing protein At1g52620 [Cucumis melo][more]
XP_011652970.11.4e-13364.75PREDICTED: pentatricopeptide repeat-containing protein At1g52620 isoform X2 [Cuc... [more]
XP_022153568.14.9e-13189.79pentatricopeptide repeat-containing protein At1g52620 [Momordica charantia][more]
XP_021830199.13.7e-7861.13pentatricopeptide repeat-containing protein At1g52620 [Prunus avium] >XP_0218302... [more]
BLAST of CsGy4G001360 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G52620.12.8e-6451.61Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G17525.11.2e-0929.89Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G22670.12.2e-0828.10Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G02060.11.0e-0529.41Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G26790.13.9e-0522.93Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsGy4G001360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SSR4|PPR77_ARATH5.1e-6351.61Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana OX... [more]
sp|Q84VG6|PP160_ARATH2.1e-0829.89Pentatricopeptide repeat-containing protein At2g17525, mitochondrial OS=Arabidop... [more]
sp|Q9LUJ4|PP248_ARATH4.0e-0728.10Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... [more]
sp|O81908|PPR2_ARATH1.9e-0429.41Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidop... [more]
sp|O81028|PP171_ARATH7.1e-0422.93Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidop... [more]
BLAST of CsGy4G001360 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KTD1|A0A0A0KTD1_CUCSA2.3e-185100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004900 PE=4 SV=1[more]
tr|A0A1S3BYA4|A0A1S3BYA4_CUCME4.2e-16395.80pentatricopeptide repeat-containing protein At1g52620 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A251PX80|A0A251PX80_PRUPE7.2e-7861.13Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G082900 PE=4 SV=1[more]
tr|A0A2P4HCQ7|A0A2P4HCQ7_QUESU4.3e-7560.32Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_4... [more]
tr|F6HXB8|F6HXB8_VITVI9.1e-7356.68Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g06530 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G001360.1CsGy4G001360.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 341..410
e-value: 1.2E-20
score: 75.8
coord: 550..619
e-value: 7.5E-22
score: 79.7
coord: 620..683
e-value: 8.1E-12
score: 47.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 235..340
e-value: 5.3E-25
score: 90.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 35..161
e-value: 2.0E-8
score: 35.7
coord: 162..234
e-value: 4.9E-10
score: 41.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 684..831
e-value: 7.5E-10
score: 40.7
coord: 411..549
e-value: 2.1E-36
score: 127.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 167..219
e-value: 7.5E-9
score: 35.5
coord: 241..290
e-value: 2.5E-16
score: 59.5
coord: 451..498
e-value: 8.0E-10
score: 38.6
coord: 346..395
e-value: 2.0E-15
score: 56.6
coord: 591..640
e-value: 2.4E-19
score: 69.2
coord: 521..570
e-value: 5.0E-12
score: 45.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 714..742
e-value: 0.013
score: 15.6
coord: 419..449
e-value: 0.0015
score: 18.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 629..662
e-value: 2.9E-7
score: 28.2
coord: 209..243
e-value: 5.9E-4
score: 17.8
coord: 385..417
e-value: 4.2E-6
score: 24.6
coord: 594..628
e-value: 2.3E-10
score: 38.0
coord: 280..313
e-value: 1.0E-5
score: 23.4
coord: 245..277
e-value: 7.2E-9
score: 33.3
coord: 455..488
e-value: 1.6E-6
score: 25.9
coord: 170..199
e-value: 6.3E-6
score: 24.0
coord: 490..521
e-value: 2.0E-6
score: 25.6
coord: 526..558
e-value: 2.0E-6
score: 25.6
coord: 419..453
e-value: 5.0E-7
score: 27.5
coord: 559..593
e-value: 3.5E-8
score: 31.1
coord: 714..746
e-value: 2.4E-5
score: 22.2
coord: 349..382
e-value: 2.0E-8
score: 31.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 627..661
score: 10.413
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 168..198
score: 9.12
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 746..781
score: 5.59
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 452..486
score: 10.797
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 592..626
score: 14.25
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 487..521
score: 12.299
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 522..556
score: 10.183
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 557..591
score: 10.961
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 347..381
score: 13.252
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 382..416
score: 10.479
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 242..276
score: 13.515
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 132..167
score: 6.073
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 277..311
score: 9.876
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 97..131
score: 7.651
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 8.166
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 207..241
score: 9.273
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 417..451
score: 10.983
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 711..745
score: 8.495
NoneNo IPR availablePANTHERPTHR44149:SF1SUBFAMILY NOT NAMEDcoord: 547..761
NoneNo IPR availablePANTHERPTHR44149FAMILY NOT NAMEDcoord: 403..581
coord: 299..475
coord: 472..677
NoneNo IPR availablePANTHERPTHR44149:SF1SUBFAMILY NOT NAMEDcoord: 299..475
coord: 472..677
NoneNo IPR availablePANTHERPTHR44149:SF1SUBFAMILY NOT NAMEDcoord: 403..581
NoneNo IPR availablePANTHERPTHR44149:SF1SUBFAMILY NOT NAMEDcoord: 696..818
coord: 167..322
NoneNo IPR availablePANTHERPTHR44149FAMILY NOT NAMEDcoord: 696..818
coord: 167..322
NoneNo IPR availablePANTHERPTHR44149FAMILY NOT NAMEDcoord: 547..761
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 143..274
coord: 451..551

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G001360Cla012705Watermelon (97103) v1cgybwmB282
CsGy4G001360Csa4G004900Cucumber (Chinese Long) v2cgybcuB165
CsGy4G001360MELO3C017894Melon (DHL92) v3.5.1cgybmeB269
CsGy4G001360ClCG07G012740Watermelon (Charleston Gray)cgybwcgB304
CsGy4G001360CSPI04G01470Wild cucumber (PI 183967)cgybcpiB168
CsGy4G001360Lsi07G004720Bottle gourd (USVL1VR-Ls)cgyblsiB285
CsGy4G001360MELO3C017894.2Melon (DHL92) v3.6.1cgybmedB266
CsGy4G001360CsaV3_4G001460Cucumber (Chinese Long) v3cgybcucB171
CsGy4G001360Cla97C07G139540Watermelon (97103) v2cgybwmbB306
CsGy4G001360Bhi01G002768Wax gourdcgybwgoB362
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G001360Watermelon (97103) v2cgybwmbB295
CsGy4G001360Watermelon (97103) v2cgybwmbB316
CsGy4G001360Wax gourdcgybwgoB403
CsGy4G001360Cucumber (Gy14) v2cgybcgybB023
CsGy4G001360Cucumber (Gy14) v2cgybcgybB055
CsGy4G001360Cucumber (Gy14) v2cgybcgybB139
CsGy4G001360Cucurbita maxima (Rimu)cgybcmaB475
CsGy4G001360Cucurbita maxima (Rimu)cgybcmaB485
CsGy4G001360Cucurbita maxima (Rimu)cgybcmaB506
CsGy4G001360Cucurbita moschata (Rifu)cgybcmoB444
CsGy4G001360Cucurbita moschata (Rifu)cgybcmoB455
CsGy4G001360Cucurbita moschata (Rifu)cgybcmoB478
CsGy4G001360Cucurbita pepo (Zucchini)cgybcpeB549
CsGy4G001360Cucurbita pepo (Zucchini)cgybcpeB497
CsGy4G001360Cucurbita pepo (Zucchini)cgybcpeB552
CsGy4G001360Cucumber (Chinese Long) v2cgybcuB159
CsGy4G001360Cucumber (Chinese Long) v2cgybcuB195
CsGy4G001360Bottle gourd (USVL1VR-Ls)cgyblsiB251
CsGy4G001360Bottle gourd (USVL1VR-Ls)cgyblsiB275
CsGy4G001360Melon (DHL92) v3.5.1cgybmeB238
CsGy4G001360Melon (DHL92) v3.6.1cgybmedB239
CsGy4G001360Watermelon (Charleston Gray)cgybwcgB249
CsGy4G001360Watermelon (Charleston Gray)cgybwcgB295
CsGy4G001360Watermelon (97103) v1cgybwmB267
CsGy4G001360Watermelon (97103) v1cgybwmB332
CsGy4G001360Wild cucumber (PI 183967)cgybcpiB198
CsGy4G001360Silver-seed gourdcarcgybB0127
CsGy4G001360Silver-seed gourdcarcgybB0140
CsGy4G001360Silver-seed gourdcarcgybB0215
CsGy4G001360Cucumber (Chinese Long) v3cgybcucB166
CsGy4G001360Cucumber (Chinese Long) v3cgybcucB199