CsGy4G001350 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G001350
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
LocationChr4 : 822996 .. 824195 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTCTCTGCGACCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTCCATCTACAGACACCACTGCGGCTGTATTGAATCACGTTCAGAACTCAAAATCTCTCGAGGAACCTGCCCTTGTGAAGCTTAAAGCAGAACGAGACCCCGAAAAGCTGTTCCATCTCTTTAAAGCAAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTCGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAACATCAGAAGACACTTCCACAGGGACGCCGTGAAGGATTCATTATAAGGATCATAATGCTATATGGTAAGGCTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGGTGCCTTAGGACTGTTAAGTCTTTTAATGCTGTGCTTAAGGTTTTGATGAAGAGCCGTGATTTAGGAGCCCTTGAGGCATTTTTAAGTGAAGCTCCTGAAAAATTCGATATTGAGTTGGATATTATTTCTGTTAACATTCTTGTTAAGGCGTTTTGTGATTTCGGTTTTTTAAATAGAGCTTATCTTCTCATGTTAGAGATGGAAAAACTGGGAATAAAACCAGATGTGGTTACCTATACGACATTAATTTCGGCTTCTTACAAGGATAGACAATCTGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTACTACTTTCAATGTGAGAATTCAACATTTGATTGAGAGGAGAAGAGCGTGGGATGCTAATAAATTGATGAAAATGATGAGGAACATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGTCAAGCCGGGTTGCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGTTATAAACCGAATGTCAAAATTTATCAAACCATGATTCATTATCTGTGCAAAAGTGAGGATTTTAATCTTGCACACACAATATGCAAAGATGCCATGAACAAGAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAGGGCCTCAACAAGATGGGAGAGGCTGGTAAGGCTCAATTGATCCTAGCATTGGCAAGGAAAAGGGTACCTCCTTTCTCTAAAAATCAGTTGGAAGCTTTGAATACCACACTGGCCAATAGCTGA

mRNA sequence

ATGCTCTCTCTGCGACCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTCCATCTACAGACACCACTGCGGCTGTATTGAATCACGTTCAGAACTCAAAATCTCTCGAGGAACCTGCCCTTGTGAAGCTTAAAGCAGAACGAGACCCCGAAAAGCTGTTCCATCTCTTTAAAGCAAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTCGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAACATCAGAAGACACTTCCACAGGGACGCCGTGAAGGATTCATTATAAGGATCATAATGCTATATGGTAAGGCTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGGTGCCTTAGGACTGTTAAGTCTTTTAATGCTGTGCTTAAGGTTTTGATGAAGAGCCGTGATTTAGGAGCCCTTGAGGCATTTTTAAGTGAAGCTCCTGAAAAATTCGATATTGAGTTGGATATTATTTCTGTTAACATTCTTGTTAAGGCGTTTTGTGATTTCGGTTTTTTAAATAGAGCTTATCTTCTCATGTTAGAGATGGAAAAACTGGGAATAAAACCAGATGTGGTTACCTATACGACATTAATTTCGGCTTCTTACAAGGATAGACAATCTGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTACTACTTTCAATGTGAGAATTCAACATTTGATTGAGAGGAGAAGAGCGTGGGATGCTAATAAATTGATGAAAATGATGAGGAACATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGTCAAGCCGGGTTGCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGTTATAAACCGAATGTCAAAATTTATCAAACCATGATTCATTATCTGTGCAAAAGTGAGGATTTTAATCTTGCACACACAATATGCAAAGATGCCATGAACAAGAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAGGGCCTCAACAAGATGGGAGAGGCTGGTAAGGCTCAATTGATCCTAGCATTGGCAAGGAAAAGGGTACCTCCTTTCTCTAAAAATCAGTTGGAAGCTTTGAATACCACACTGGCCAATAGCTGA

Coding sequence (CDS)

ATGCTCTCTCTGCGACCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTCCATCTACAGACACCACTGCGGCTGTATTGAATCACGTTCAGAACTCAAAATCTCTCGAGGAACCTGCCCTTGTGAAGCTTAAAGCAGAACGAGACCCCGAAAAGCTGTTCCATCTCTTTAAAGCAAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTCGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAACATCAGAAGACACTTCCACAGGGACGCCGTGAAGGATTCATTATAAGGATCATAATGCTATATGGTAAGGCTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGGTGCCTTAGGACTGTTAAGTCTTTTAATGCTGTGCTTAAGGTTTTGATGAAGAGCCGTGATTTAGGAGCCCTTGAGGCATTTTTAAGTGAAGCTCCTGAAAAATTCGATATTGAGTTGGATATTATTTCTGTTAACATTCTTGTTAAGGCGTTTTGTGATTTCGGTTTTTTAAATAGAGCTTATCTTCTCATGTTAGAGATGGAAAAACTGGGAATAAAACCAGATGTGGTTACCTATACGACATTAATTTCGGCTTCTTACAAGGATAGACAATCTGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTACTACTTTCAATGTGAGAATTCAACATTTGATTGAGAGGAGAAGAGCGTGGGATGCTAATAAATTGATGAAAATGATGAGGAACATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGTCAAGCCGGGTTGCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGTTATAAACCGAATGTCAAAATTTATCAAACCATGATTCATTATCTGTGCAAAAGTGAGGATTTTAATCTTGCACACACAATATGCAAAGATGCCATGAACAAGAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAGGGCCTCAACAAGATGGGAGAGGCTGGTAAGGCTCAATTGATCCTAGCATTGGCAAGGAAAAGGGTACCTCCTTTCTCTAAAAATCAGTTGGAAGCTTTGAATACCACACTGGCCAATAGCTGA

Protein sequence

MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKGLNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS
Homology
[Close]
BLAST of CsGy4G001350 vs. NCBI nr
Match: XP_004152207.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucumis sativus] >KGN52878.1 hypothetical protein Csa_4G004890 [Cucumis sativus])

HSP 1 Score: 481.5 bits (1238), Expect = 2.8e-132
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0 

Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLXXXX 240
           ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLXXXX
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 400
           XXXXGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS
Sbjct: 361 XXXXGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 399

[Close]
BLAST of CsGy4G001350 vs. NCBI nr
Match: XP_016901584.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucumis melo])

HSP 1 Score: 458.8 bits (1179), Expect = 1.9e-125
Identity = 231/236 (97.88%), Postives = 235/236 (99.58%), Query Frame = 0 

Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIPST TTAAVLNHVQNSK+LEEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTGTTAAVLNHVQNSKALEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFL+EAPEKFDIELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLNEAPEKFDIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNL 237
           ILVKAFCDFGFLNRAYLLML+MEKLGIKPDVVTYTTLISASYKDR+SEISNGLWNL
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLDMEKLGIKPDVVTYTTLISASYKDRRSEISNGLWNL 236

[Close]
BLAST of CsGy4G001350 vs. NCBI nr
Match: XP_023527765.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527766.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527767.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527768.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527769.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527770.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.9 bits (1091), Expect = 3.1e-115
Identity = 363/398 (91.21%), Postives = 378/398 (94.97%), Query Frame = 0 

Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVI S++T AAVLNHVQNSK +EEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHA+DTFY+MHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL EAPEKF+IELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLXXXX 240
           I+VKAFCD G LNRAYL +LEMEK+GI+PDVVTYTTLISA YK  Q EISNGLWNL    
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKVGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXGEAGKAQLILALARKRVPPFSKNQLEALNTTLAN 399
           XXXX + GKAQLIL+LARKRVPPFS  QLEALNTT+AN
Sbjct: 361 XXXXXQPGKAQLILSLARKRVPPFSTTQLEALNTTMAN 398

[Close]
BLAST of CsGy4G001350 vs. NCBI nr
Match: XP_022979497.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979498.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979499.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979500.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979501.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979502.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 424.5 bits (1090), Expect = 4.1e-115
Identity = 366/398 (91.96%), Postives = 382/398 (95.98%), Query Frame = 0 

Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVI ST+T+ AVLNHVQNSK +EEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIVSTETSMAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHA+DTFY+MHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL EAPEKF+IELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLXXXX 240
           I+VKAFCD G LNRAYLL+LEMEK+GI+PDVVTYTTLISA YK  Q EISNGLWNL XXX
Sbjct: 181 IVVKAFCDMGILNRAYLLILEMEKVGIRPDVVTYTTLISALYKYNQCEISNGLWNLMXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXGEAGKAQLILALARKRVPPFSKNQLEALNTTLAN 399
           XXXX + GKAQLIL+LARKRVPPFS  QLEALNTT+AN
Sbjct: 361 XXXXXQPGKAQLILSLARKRVPPFSTTQLEALNTTMAN 398

[Close]
BLAST of CsGy4G001350 vs. NCBI nr
Match: XP_022153643.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 422.9 bits (1086), Expect = 1.2e-114
Identity = 213/236 (90.25%), Postives = 223/236 (94.49%), Query Frame = 0 

Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFC AATVI ST+T AAV N V NSKS+EEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCRAATVIVSTETPAAVFNQVLNSKSVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHA+DTFYDMHLYGC RTVKSFNAVLKVLMK+RDLGA+EAFLSEAPEKFDIELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGAIEAFLSEAPEKFDIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNL 237
           I+VKAFCD G L+RAYLLMLEMEK+GI+PDVVTYTTLISA YKD   EISNGLWNL
Sbjct: 181 IVVKAFCDIGILSRAYLLMLEMEKVGIRPDVVTYTTLISAFYKDNLCEISNGLWNL 236

[Close]
BLAST of CsGy4G001350 vs. TAIR10
Match: AT1G80150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 306.6 bits (784), Expect = 2.2e-83
Identity = 161/240 (67.08%), Postives = 186/240 (77.50%), Query Frame = 0 

Query: 1   MLSLRPIRRFCH----AATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHL 60
           MLSLR IRRFCH    AAT I    T +   N +Q  K LEEPALVKLK+ERDPEKL++L
Sbjct: 1   MLSLRHIRRFCHFPSSAATGIAYVSTES---NQIQGLKPLEEPALVKLKSERDPEKLYNL 60

Query: 61  FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYG 120
           FKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGFI+RIIMLYG
Sbjct: 61  FKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYG 120

Query: 121 KAEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDI 180
           KA M K ALDTF++M LYGC R+VKSFNA L+VL  + DL  +  FL +AP K+ I++D 
Sbjct: 121 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 180

Query: 181 ISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNL 237
           +S NI +K+FC+ G L+ AY+ M EMEK G+ PDVVTYTTLISA YK  +  I NGLWNL
Sbjct: 181 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 237

[Close]
BLAST of CsGy4G001350 vs. TAIR10
Match: AT2G18520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-27
Identity = 79/235 (33.62%), Postives = 128/235 (54.47%), Query Frame = 0 

Query: 2   LSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANA 61
           L LR +RRF   AT I S  T       +  +KS       KL+  +DP+K   ++K+ +
Sbjct: 6   LYLRFLRRF-STATGIDSQTTAYPGAITMSKAKS-------KLRKVQDPDKALAIYKSVS 65

Query: 62  HNRL-VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
           +N    + +R+A E TV RLA ++RF  IE L+E  K  P+ + E F+  +I  YG+A M
Sbjct: 66  NNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASM 125

Query: 122 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKF-DIELDIISV 181
             HA+  F +M   G  RTV SFNA+L   + S     +     E P+++ +I  D IS 
Sbjct: 126 FDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISY 185

Query: 182 NILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLW 235
            +L+K++CD G   +A  +M +ME  G++  ++ +TT++ + YK+   + +  LW
Sbjct: 186 GMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLW 232

[Close]
BLAST of CsGy4G001350 vs. TAIR10
Match: AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-27
Identity = 78/232 (33.62%), Postives = 123/232 (53.02%), Query Frame = 0 

Query: 2   LSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLF-KAN 61
           +SLR +RRF  AA       TTA     +  SK     A   L+ E DP+K   ++   +
Sbjct: 6   ISLRLVRRFASAAA---DGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65

Query: 62  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
            H+   + +R+A E TV RLA  RRF  IE L+E  K  P+ + E F   +I  YG+A M
Sbjct: 66  DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125

Query: 122 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFD-IELDIISV 181
             HA+ TF  M  YG  R+  SFNA+L   + S++   +         +++ I  D IS 
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDXXXXRYNKIIPDKISY 185

Query: 182 NILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISN 232
            IL+K++CD G   +A  +M +M+  G++   + +TT++S+ YK  + E+++
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVAD 229

[Close]
BLAST of CsGy4G001350 vs. TAIR10
Match: AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 119.0 bits (297), Expect = 6.6e-27
Identity = 74/198 (37.37%), Postives = 104/198 (52.53%), Query Frame = 0 

Query: 6   PIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRL 65
           PIRRF  AATV+       A ++  Q S +    +LV    ER+P+++   FK    +  
Sbjct: 16  PIRRFSSAATVVSEPTAVTAAISPPQKSLT----SLV--NGERNPKRIVEKFKKACESER 75

Query: 66  VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAL 125
              N   ++ TV RL  A+R  Y+E +LE QK      +EGF  RII LYGKA M ++A 
Sbjct: 76  FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135

Query: 126 DTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKA 185
             F +M    C R+V SFNA+L     S+    +E   +E P K  I+ DI+S N L+KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195

Query: 186 FCDFGFLNRAYLLMLEME 204
            C+   L  A  L+ E+E
Sbjct: 196 LCEKDSLPEAVALLDEIE 207

[Close]
BLAST of CsGy4G001350 vs. TAIR10
Match: AT3G13160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-24
Identity = 69/197 (35.03%), Postives = 97/197 (49.24%), Query Frame = 0 

Query: 8   RRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKL-KAERDPEKLFHLFKANAHNRLV 67
           RRF  A T   +T              S  +P+L+ L   ERDP+ +   FK        
Sbjct: 21  RRFFSAVTAAAAT-------------PSPPKPSLITLVNDERDPKFITEKFKKACQAEWF 80

Query: 68  IENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHALD 127
            +N   +E TV RLA A++F+++E +LE Q   P   +EGF+ RII LYG+  M ++A  
Sbjct: 81  RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 140

Query: 128 TFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKAF 187
            F +M    C RT  SFNA+L   + S+    +E    E P K  IE D+ S N L+K  
Sbjct: 141 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 200

Query: 188 CDFGFLNRAYLLMLEME 204
           C  G    A  L+ E+E
Sbjct: 201 CGKGSFTEAVALIDEIE 204

[Close]
BLAST of CsGy4G001350 vs. Swiss-Prot
Match: sp|Q8GW57|PP134_ARATH (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 306.6 bits (784), Expect = 4.0e-82
Identity = 161/240 (67.08%), Postives = 186/240 (77.50%), Query Frame = 0 

Query: 1   MLSLRPIRRFCH----AATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHL 60
           MLSLR IRRFCH    AAT I    T +   N +Q  K LEEPALVKLK+ERDPEKL++L
Sbjct: 1   MLSLRHIRRFCHFPSSAATGIAYVSTES---NQIQGLKPLEEPALVKLKSERDPEKLYNL 60

Query: 61  FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYG 120
           FKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGFI+RIIMLYG
Sbjct: 61  FKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYG 120

Query: 121 KAEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDI 180
           KA M K ALDTF++M LYGC R+VKSFNA L+VL  + DL  +  FL +AP K+ I++D 
Sbjct: 121 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 180

Query: 181 ISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNL 237
           +S NI +K+FC+ G L+ AY+ M EMEK G+ PDVVTYTTLISA YK  +  I NGLWNL
Sbjct: 181 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 237

[Close]
BLAST of CsGy4G001350 vs. Swiss-Prot
Match: sp|Q9ZU67|PP162_ARATH (Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g18520 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.1e-26
Identity = 79/235 (33.62%), Postives = 128/235 (54.47%), Query Frame = 0 

Query: 2   LSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANA 61
           L LR +RRF   AT I S  T       +  +KS       KL+  +DP+K   ++K+ +
Sbjct: 6   LYLRFLRRF-STATGIDSQTTAYPGAITMSKAKS-------KLRKVQDPDKALAIYKSVS 65

Query: 62  HNRL-VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
           +N    + +R+A E TV RLA ++RF  IE L+E  K  P+ + E F+  +I  YG+A M
Sbjct: 66  NNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASM 125

Query: 122 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKF-DIELDIISV 181
             HA+  F +M   G  RTV SFNA+L   + S     +     E P+++ +I  D IS 
Sbjct: 126 FDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISY 185

Query: 182 NILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLW 235
            +L+K++CD G   +A  +M +ME  G++  ++ +TT++ + YK+   + +  LW
Sbjct: 186 GMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLW 232

[Close]
BLAST of CsGy4G001350 vs. Swiss-Prot
Match: sp|Q9M065|PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36680 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.1e-26
Identity = 78/232 (33.62%), Postives = 123/232 (53.02%), Query Frame = 0 

Query: 2   LSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLF-KAN 61
           +SLR +RRF  AA       TTA     +  SK     A   L+ E DP+K   ++   +
Sbjct: 6   ISLRLVRRFASAAA---DGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65

Query: 62  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
            H+   + +R+A E TV RLA  RRF  IE L+E  K  P+ + E F   +I  YG+A M
Sbjct: 66  DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125

Query: 122 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFD-IELDIISV 181
             HA+ TF  M  YG  R+  SFNA+L   + S++   +         +++ I  D IS 
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDXXXXRYNKIIPDKISY 185

Query: 182 NILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISN 232
            IL+K++CD G   +A  +M +M+  G++   + +TT++S+ YK  + E+++
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVAD 229

[Close]
BLAST of CsGy4G001350 vs. Swiss-Prot
Match: sp|Q9LG23|PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-25
Identity = 74/198 (37.37%), Postives = 104/198 (52.53%), Query Frame = 0 

Query: 6   PIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRL 65
           PIRRF  AATV+       A ++  Q S +    +LV    ER+P+++   FK    +  
Sbjct: 16  PIRRFSSAATVVSEPTAVTAAISPPQKSLT----SLV--NGERNPKRIVEKFKKACESER 75

Query: 66  VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAL 125
              N   ++ TV RL  A+R  Y+E +LE QK      +EGF  RII LYGKA M ++A 
Sbjct: 76  FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135

Query: 126 DTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKA 185
             F +M    C R+V SFNA+L     S+    +E   +E P K  I+ DI+S N L+KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195

Query: 186 FCDFGFLNRAYLLMLEME 204
            C+   L  A  L+ E+E
Sbjct: 196 LCEKDSLPEAVALLDEIE 207

[Close]
BLAST of CsGy4G001350 vs. Swiss-Prot
Match: sp|Q9LK57|PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g13160 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.2e-23
Identity = 69/197 (35.03%), Postives = 97/197 (49.24%), Query Frame = 0 

Query: 8   RRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKL-KAERDPEKLFHLFKANAHNRLV 67
           RRF  A T   +T              S  +P+L+ L   ERDP+ +   FK        
Sbjct: 21  RRFFSAVTAAAAT-------------PSPPKPSLITLVNDERDPKFITEKFKKACQAEWF 80

Query: 68  IENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHALD 127
            +N   +E TV RLA A++F+++E +LE Q   P   +EGF+ RII LYG+  M ++A  
Sbjct: 81  RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 140

Query: 128 TFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKAF 187
            F +M    C RT  SFNA+L   + S+    +E    E P K  IE D+ S N L+K  
Sbjct: 141 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 200

Query: 188 CDFGFLNRAYLLMLEME 204
           C  G    A  L+ E+E
Sbjct: 201 CGKGSFTEAVALIDEIE 204

[Close]
BLAST of CsGy4G001350 vs. TrEMBL
Match: tr|A0A0A0KTI5|A0A0A0KTI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004890 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.8e-132
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0 

Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLXXXX 240
           ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLXXXX
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 400
           XXXXGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS
Sbjct: 361 XXXXGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 399

[Close]
BLAST of CsGy4G001350 vs. TrEMBL
Match: tr|A0A1S4E048|A0A1S4E048_CUCME (pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494891 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.3e-125
Identity = 231/236 (97.88%), Postives = 235/236 (99.58%), Query Frame = 0 

Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIPST TTAAVLNHVQNSK+LEEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTGTTAAVLNHVQNSKALEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFL+EAPEKFDIELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLNEAPEKFDIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNL 237
           ILVKAFCDFGFLNRAYLLML+MEKLGIKPDVVTYTTLISASYKDR+SEISNGLWNL
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLDMEKLGIKPDVVTYTTLISASYKDRRSEISNGLWNL 236

[Close]
BLAST of CsGy4G001350 vs. TrEMBL
Match: tr|A0A251PYH5|A0A251PYH5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G083000 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.4e-100
Identity = 185/236 (78.39%), Postives = 205/236 (86.86%), Query Frame = 0 

Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLR  RRFCHAA  I S    AAV NHV ++K LEEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRTSRRFCHAAIAITSNGCPAAVSNHVFDTKPLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHN LVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFI+RII LYGKA M
Sbjct: 61  AHNTLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIMRIITLYGKAGM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
            KHA+DTF DMHLYGC RTVKSFNA LKVL ++RDLGA+EAFL+E P+KFDIE+D+ SVN
Sbjct: 121 TKHAIDTFCDMHLYGCCRTVKSFNAALKVLTQTRDLGAIEAFLNEVPQKFDIEVDVFSVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNL 237
           IL+KAFC+ G L +AY +M+EMEKLGI+PDV+TYTTL+SA YK+   EI NGLWNL
Sbjct: 181 ILIKAFCEMGILVKAYRIMVEMEKLGIRPDVITYTTLMSAFYKENWCEIGNGLWNL 236

[Close]
BLAST of CsGy4G001350 vs. TrEMBL
Match: tr|A0A2N9G3K7|A0A2N9G3K7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25169 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.6e-98
Identity = 180/235 (76.60%), Postives = 203/235 (86.38%), Query Frame = 0 

Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLR +RRF HA   I STD+ AAV N ++N K LEEPALVKLK ERDPEKLFHLFKAN
Sbjct: 1   MLSLRSVRRFYHAVAAIASTDSPAAVSNFIRNPKPLEEPALVKLKNERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGA  FDYIEHLLEHQKTLPQGRREGFI+RIIMLYGKA M
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGAGHFDYIEHLLEHQKTLPQGRREGFILRIIMLYGKAGM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
            KHALDTFYDMHLYGC RTVKSFNA LKVL ++RDL A+E F+++ P +F +E+DI SVN
Sbjct: 121 TKHALDTFYDMHLYGCRRTVKSFNAALKVLTQTRDLHAVEEFINDVPVRFGVEVDIFSVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWN 236
           I++KAFC+ G L++AYL+M+EMEKLGIKPDV+TYTTLISA YKD +  I NGLWN
Sbjct: 181 IVIKAFCEMGCLDKAYLIMIEMEKLGIKPDVITYTTLISAFYKDNRCMIGNGLWN 235

[Close]
BLAST of CsGy4G001350 vs. TrEMBL
Match: tr|B9RV44|B9RV44_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0898900 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97
Identity = 186/237 (78.48%), Postives = 207/237 (87.34%), Query Frame = 0 

Query: 1   MLSLRPIRRFCH-AATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKA 60
           MLSLRPIRRFC+ AA  I STD+ AAV N V N K LEEPAL KLKAERDPEKLF+LFKA
Sbjct: 1   MLSLRPIRRFCYSAAAAISSTDSPAAVSNRVLNQKPLEEPALAKLKAERDPEKLFNLFKA 60

Query: 61  NAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAE 120
           NA NRLVIENRFAFEDT+SRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKA 
Sbjct: 61  NARNRLVIENRFAFEDTISRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAG 120

Query: 121 MIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISV 180
           M KHA+DTF DMH+YGC RTVKSFNA LKVL ++ DL A++AFLSE PEKFDI LDI SV
Sbjct: 121 MTKHAVDTFNDMHMYGCKRTVKSFNAALKVLTETCDLEAIKAFLSEVPEKFDIILDIFSV 180

Query: 181 NILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNL 237
           NI++KAFC    L++AYL+M++ME+LGI+PDVVTYTTLISA YK+ + EISNGLWNL
Sbjct: 181 NIIIKAFCKMSILDKAYLVMIQMERLGIRPDVVTYTTLISAFYKNDRWEISNGLWNL 237

The following BLAST results are available for this feature:
BLAST of CsGy4G001350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152207.12.8e-132100.00PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial ... [more]
XP_016901584.11.9e-12597.88PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial ... [more]
XP_023527765.13.1e-11591.21pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita ... [more]
XP_022979497.14.1e-11591.96pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucur... [more]
XP_022153643.11.2e-11490.25pentatricopeptide repeat-containing protein At1g80150, mitochondrial isoform X2 ... [more]
BLAST of CsGy4G001350 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80150.12.2e-8367.08Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G18520.12.3e-2733.62Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G36680.12.3e-2733.62Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G55890.16.6e-2737.37Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G13160.12.4e-2435.03Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsGy4G001350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GW57|PP134_ARATH4.0e-8267.08Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop... [more]
sp|Q9ZU67|PP162_ARATH4.1e-2633.62Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidop... [more]
sp|Q9M065|PP352_ARATH4.1e-2633.62Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop... [more]
sp|Q9LG23|PPR82_ARATH1.2e-2537.37Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop... [more]
sp|Q9LK57|PP226_ARATH4.2e-2335.03Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop... [more]
BLAST of CsGy4G001350 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KTI5|A0A0A0KTI5_CUCSA1.8e-132100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004890 PE=4 SV=1[more]
tr|A0A1S4E048|A0A1S4E048_CUCME1.3e-12597.88pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Cucumis ... [more]
tr|A0A251PYH5|A0A251PYH5_PRUPE5.4e-10078.39Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G083000 PE=4 SV=1[more]
tr|A0A2N9G3K7|A0A2N9G3K7_FAGSY6.6e-9876.60Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25169 PE=4 SV=1[more]
tr|B9RV44|B9RV44_RICCO1.1e-9778.48Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis OX=398... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G001350.1CsGy4G001350.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 111..136
e-value: 0.33
score: 11.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 244..293
e-value: 1.6E-9
score: 37.7
coord: 175..220
e-value: 7.2E-10
score: 38.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 178..211
e-value: 7.9E-4
score: 17.4
coord: 282..316
e-value: 2.7E-7
score: 28.3
coord: 318..350
e-value: 4.7E-4
score: 18.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 139..169
score: 5.568
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 280..314
score: 12.321
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 245..279
score: 8.561
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 210..244
score: 9.032
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 350..380
score: 5.601
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 315..349
score: 8.111
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 175..209
score: 10.435
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 232..399
e-value: 2.2E-30
score: 108.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 104..231
e-value: 6.1E-21
score: 76.5
NoneNo IPR availablePANTHERPTHR24015:SF1623SUBFAMILY NOT NAMEDcoord: 11..387
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 11..387

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G001350Cla012704Watermelon (97103) v1cgybwmB282
CsGy4G001350Csa4G004890Cucumber (Chinese Long) v2cgybcuB165
CsGy4G001350MELO3C017895Melon (DHL92) v3.5.1cgybmeB269
CsGy4G001350CSPI04G01460Wild cucumber (PI 183967)cgybcpiB168
CsGy4G001350CmaCh14G013440Cucurbita maxima (Rimu)cgybcmaB485
CsGy4G001350CmoCh14G013710Cucurbita moschata (Rifu)cgybcmoB455
CsGy4G001350Cp4.1LG02g14920Cucurbita pepo (Zucchini)cgybcpeB549
CsGy4G001350Cp4.1LG03g13800Cucurbita pepo (Zucchini)cgybcpeB552
CsGy4G001350MELO3C017895.2Melon (DHL92) v3.6.1cgybmedB266
CsGy4G001350CsaV3_4G001450Cucumber (Chinese Long) v3cgybcucB171
CsGy4G001350Cla97C07G139550Watermelon (97103) v2cgybwmbB306
CsGy4G001350Bhi01G002771Wax gourdcgybwgoB362
CsGy4G001350Carg06503Silver-seed gourdcarcgybB0127
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G001350Cucumber (Gy14) v2cgybcgybB023
CsGy4G001350Cucumber (Gy14) v2cgybcgybB055
CsGy4G001350Cucumber (Gy14) v2cgybcgybB139
CsGy4G001350Cucurbita maxima (Rimu)cgybcmaB475
CsGy4G001350Cucurbita maxima (Rimu)cgybcmaB506
CsGy4G001350Cucurbita moschata (Rifu)cgybcmoB444
CsGy4G001350Cucurbita moschata (Rifu)cgybcmoB478
CsGy4G001350Cucurbita pepo (Zucchini)cgybcpeB497
CsGy4G001350Cucumber (Chinese Long) v2cgybcuB159
CsGy4G001350Cucumber (Chinese Long) v2cgybcuB195
CsGy4G001350Bottle gourd (USVL1VR-Ls)cgyblsiB251
CsGy4G001350Bottle gourd (USVL1VR-Ls)cgyblsiB275
CsGy4G001350Bottle gourd (USVL1VR-Ls)cgyblsiB285
CsGy4G001350Melon (DHL92) v3.5.1cgybmeB238
CsGy4G001350Melon (DHL92) v3.6.1cgybmedB239
CsGy4G001350Watermelon (Charleston Gray)cgybwcgB249
CsGy4G001350Watermelon (Charleston Gray)cgybwcgB295
CsGy4G001350Watermelon (Charleston Gray)cgybwcgB304
CsGy4G001350Watermelon (97103) v1cgybwmB267
CsGy4G001350Watermelon (97103) v1cgybwmB332
CsGy4G001350Wild cucumber (PI 183967)cgybcpiB198
CsGy4G001350Silver-seed gourdcarcgybB0140
CsGy4G001350Silver-seed gourdcarcgybB0215
CsGy4G001350Cucumber (Chinese Long) v3cgybcucB166
CsGy4G001350Cucumber (Chinese Long) v3cgybcucB199
CsGy4G001350Watermelon (97103) v2cgybwmbB295
CsGy4G001350Watermelon (97103) v2cgybwmbB316
CsGy4G001350Wax gourdcgybwgoB403