CsGy3G042580 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G042580
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein ROOT PRIMORDIUM DEFECTIVE 1
Location	Chr3 : 39641600 .. 39642769 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGGCGCCTTCTCGTCACCAACCTCAAGTCTACTCAAAGACAAACCCTAACCCTAACAAACCTCCTTCGCCATTCTTCTCCATACTCCACCTCCTTCCTCGTCACCAAACTCCCCAAGAAATTCAGGAAGAAACGCAAGAAACAGGATAGCCCTAGAACCAAGCTCGTCCAATCCGAACCTGATCGCATTTCTCACTTCGAGCGCATCCTCCAAACTGATACCGTCTTCCGATTCCTTTTTAAATCCAAGGATTTTCTCTCCAAGCAGCCGGAGCATGTTCTTCGTCTCGATGATGCCGGCAAGCTCTATCGCGAACTTGGCTTTCCAAGAGGTCGCAAAGTCGCTCGATCTATTGAACGCCATCCGCTTCTTTTCGAACCCTATCGTCACTCCGATGGGAAAATGTGGTTTGGATTTACGGAGTTCATGGAGGAGTTGATGGAGGAAGAGAGGAAGATTATGGACTCGATGGAGATGGATAGGGTTAGAACTGTCAGGAAGTTGCTGATGATGTCGGCGAATAAACGAATTCCATTGACGAAAATCTATCGTTGCAGGTCGGTGTTTGGAATTCCAGAGGATTTTAGAGATCGAGTGAGCCAGTATCCGGATTACTTCCGACTTGTGGTTGAAGATGATGGGAAGAGGGTGTTGGAATTGGTGAATTGGGACCCTTCTTTGGCTGTTAGTCAGCTCGAGAGAGAGTTTGTGGTGAACGAGGATAAGGTGAAAAGGCTGTTCAAGTTTCCTGTGAAACATGGCAAGGATTTGGATTTGAATATGGATGATACGAGGAAGCTAAATTTGTTGAATACACTCCCATTGGTTTCGCCATATTCAGACGGATCGAAGCTGGAGCTTTGGACATTGGAAGCAGAGAAGTACAGAGTTGGGGTGGTGCATGAGTTCTTGAGCTTGACATTAGAGAAGAAAGCTTCAATTCATCATATTGTGGAGTTCAAGGAGGAGTTTAGCTTGACTAAGCATACTTATCAGATGCTTCTGAAACAACCCAGAACCTTCTATCTGGCTGGGACAGAAATGAATTGGGTTGTTTTCTTGAAGGATGCATACGATGAAAATGGCGACTTGATTCATAAAGACCCTCAAGTGGTTTTCAATGAGAAGTTGCGTAGATATGCTCAAATGCAGAAAATGGAATGA

mRNA sequence

ATGGCTTGGCGCCTTCTCGTCACCAACCTCAAGTCTACTCAAAGACAAACCCTAACCCTAACAAACCTCCTTCGCCATTCTTCTCCATACTCCACCTCCTTCCTCGTCACCAAACTCCCCAAGAAATTCAGGAAGAAACGCAAGAAACAGGATAGCCCTAGAACCAAGCTCGTCCAATCCGAACCTGATCGCATTTCTCACTTCGAGCGCATCCTCCAAACTGATACCGTCTTCCGATTCCTTTTTAAATCCAAGGATTTTCTCTCCAAGCAGCCGGAGCATGTTCTTCGTCTCGATGATGCCGGCAAGCTCTATCGCGAACTTGGCTTTCCAAGAGGTCGCAAAGTCGCTCGATCTATTGAACGCCATCCGCTTCTTTTCGAACCCTATCGTCACTCCGATGGGAAAATGTGGTTTGGATTTACGGAGTTCATGGAGGAGTTGATGGAGGAAGAGAGGAAGATTATGGACTCGATGGAGATGGATAGGGTTAGAACTGTCAGGAAGTTGCTGATGATGTCGGCGAATAAACGAATTCCATTGACGAAAATCTATCGTTGCAGGTCGGTGTTTGGAATTCCAGAGGATTTTAGAGATCGAGTGAGCCAGTATCCGGATTACTTCCGACTTGTGGTTGAAGATGATGGGAAGAGGGTGTTGGAATTGGTGAATTGGGACCCTTCTTTGGCTGTTAGTCAGCTCGAGAGAGAGTTTGTGGTGAACGAGGATAAGGTGAAAAGGCTGTTCAAGTTTCCTGTGAAACATGGCAAGGATTTGGATTTGAATATGGATGATACGAGGAAGCTAAATTTGTTGAATACACTCCCATTGGTTTCGCCATATTCAGACGGATCGAAGCTGGAGCTTTGGACATTGGAAGCAGAGAAGTACAGAGTTGGGGTGGTGCATGAGTTCTTGAGCTTGACATTAGAGAAGAAAGCTTCAATTCATCATATTGTGGAGTTCAAGGAGGAGTTTAGCTTGACTAAGCATACTTATCAGATGCTTCTGAAACAACCCAGAACCTTCTATCTGGCTGGGACAGAAATGAATTGGGTTGTTTTCTTGAAGGATGCATACGATGAAAATGGCGACTTGATTCATAAAGACCCTCAAGTGGTTTTCAATGAGAAGTTGCGTAGATATGCTCAAATGCAGAAAATGGAATGA

Coding sequence (CDS)

ATGGCTTGGCGCCTTCTCGTCACCAACCTCAAGTCTACTCAAAGACAAACCCTAACCCTAACAAACCTCCTTCGCCATTCTTCTCCATACTCCACCTCCTTCCTCGTCACCAAACTCCCCAAGAAATTCAGGAAGAAACGCAAGAAACAGGATAGCCCTAGAACCAAGCTCGTCCAATCCGAACCTGATCGCATTTCTCACTTCGAGCGCATCCTCCAAACTGATACCGTCTTCCGATTCCTTTTTAAATCCAAGGATTTTCTCTCCAAGCAGCCGGAGCATGTTCTTCGTCTCGATGATGCCGGCAAGCTCTATCGCGAACTTGGCTTTCCAAGAGGTCGCAAAGTCGCTCGATCTATTGAACGCCATCCGCTTCTTTTCGAACCCTATCGTCACTCCGATGGGAAAATGTGGTTTGGATTTACGGAGTTCATGGAGGAGTTGATGGAGGAAGAGAGGAAGATTATGGACTCGATGGAGATGGATAGGGTTAGAACTGTCAGGAAGTTGCTGATGATGTCGGCGAATAAACGAATTCCATTGACGAAAATCTATCGTTGCAGGTCGGTGTTTGGAATTCCAGAGGATTTTAGAGATCGAGTGAGCCAGTATCCGGATTACTTCCGACTTGTGGTTGAAGATGATGGGAAGAGGGTGTTGGAATTGGTGAATTGGGACCCTTCTTTGGCTGTTAGTCAGCTCGAGAGAGAGTTTGTGGTGAACGAGGATAAGGTGAAAAGGCTGTTCAAGTTTCCTGTGAAACATGGCAAGGATTTGGATTTGAATATGGATGATACGAGGAAGCTAAATTTGTTGAATACACTCCCATTGGTTTCGCCATATTCAGACGGATCGAAGCTGGAGCTTTGGACATTGGAAGCAGAGAAGTACAGAGTTGGGGTGGTGCATGAGTTCTTGAGCTTGACATTAGAGAAGAAAGCTTCAATTCATCATATTGTGGAGTTCAAGGAGGAGTTTAGCTTGACTAAGCATACTTATCAGATGCTTCTGAAACAACCCAGAACCTTCTATCTGGCTGGGACAGAAATGAATTGGGTTGTTTTCTTGAAGGATGCATACGATGAAAATGGCGACTTGATTCATAAAGACCCTCAAGTGGTTTTCAATGAGAAGTTGCGTAGATATGCTCAAATGCAGAAAATGGAATGA

Protein sequence

MAWRLLVTNLKSTQRQTLTLTNLLRHSSPYSTSFLVTKLPKKFRKKRKKQDSPRTKLVQSEPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSIERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIPLTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVVNEDKVKRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAYDENGDLIHKDPQVVFNEKLRRYAQMQKME

Homology

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BLAST of CsGy3G042580 vs. NCBI nr
Match: XP_004136286.1 (PREDICTED: uncharacterized protein LOC101212691 [Cucumis sativus] >KGN60216.1 hypothetical protein Csa_3G889735 [Cucumis sativus])

HSP 1 Score: 769.2 bits (1985), Expect = 6.5e-219
Identity = 387/389 (99.49%), Postives = 388/389 (99.74%), Query Frame = 0


Query: 1   MAWRLLVTNLKSTQRQTLTLTNLLRHSSPYSTSFLVTKLPKKFRKKRKKQDSPRTKLVQS 60
           MAWRLLVTNLKSTQRQTLTLTNLLRHSSPYSTSFLVTKLPKKFRKKRKK DSPRTKLVQS
Sbjct: 1   MAWRLLVTNLKSTQRQTLTLTNLLRHSSPYSTSFLVTKLPKKFRKKRKKHDSPRTKLVQS 60

Query: 61  EPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI 120
           EPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI
Sbjct: 61  EPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI 120

Query: 121 ERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIP 180
           ERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIP
Sbjct: 121 ERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIP 180

Query: 181 LTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVV 240
           LTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVV
Sbjct: 181 LTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVV 240

Query: 241 NEDKVKRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKYRVG 300
           NEDKVKRLFKFPVKHGKDLDLNMDDTR+LNLLNTLPLVSPYSDGSKLELWTLEAEKYRVG
Sbjct: 241 NEDKVKRLFKFPVKHGKDLDLNMDDTRRLNLLNTLPLVSPYSDGSKLELWTLEAEKYRVG 300

Query: 301 VVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY 360
           VVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY
Sbjct: 301 VVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY 360

Query: 361 DENGDLIHKDPQVVFNEKLRRYAQMQKME 390
           DENGDLIHKDPQVVFNEKLRRYAQMQKME
Sbjct: 361 DENGDLIHKDPQVVFNEKLRRYAQMQKME 389

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BLAST of CsGy3G042580 vs. NCBI nr
Match: XP_008466225.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 744.6 bits (1921), Expect = 1.7e-211
Identity = 371/389 (95.37%), Postives = 385/389 (98.97%), Query Frame = 0


Query: 1   MAWRLLVTNLKSTQRQTLTLTNLLRHSSPYSTSFLVTKLPKKFRKKRKKQDSPRTKLVQS 60
           MAWRLLVTNLKSTQ QTLTLTNLLRHSSP+STSFLVTKLPKKFRKKRKK +SPRTKLVQS
Sbjct: 1   MAWRLLVTNLKSTQTQTLTLTNLLRHSSPFSTSFLVTKLPKKFRKKRKKHESPRTKLVQS 60

Query: 61  EPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI 120
           EPDRISHFERILQTD+ FRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI
Sbjct: 61  EPDRISHFERILQTDSFFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI 120

Query: 121 ERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIP 180
           ERHPLLFEPYRHSDGKMWFGFTEFMEEL+EEER+IMDSMEMDRVRTVRKLLMMSANKRIP
Sbjct: 121 ERHPLLFEPYRHSDGKMWFGFTEFMEELIEEEREIMDSMEMDRVRTVRKLLMMSANKRIP 180

Query: 181 LTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVV 240
           LTKIYRCRSVFGIPEDFRDRVS+YPDYFRLVVEDDGKRVLELVNW+PSLAVSQLEREFVV
Sbjct: 181 LTKIYRCRSVFGIPEDFRDRVSKYPDYFRLVVEDDGKRVLELVNWEPSLAVSQLEREFVV 240

Query: 241 NEDKVKRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKYRVG 300
           NEDKVKR+F FPVKHG+DLDL++DDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKYR+G
Sbjct: 241 NEDKVKRMFMFPVKHGRDLDLDLDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKYRLG 300

Query: 301 VVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY 360
           +VHEFLSLTLEK+ASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY
Sbjct: 301 LVHEFLSLTLEKRASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY 360

Query: 361 DENGDLIHKDPQVVFNEKLRRYAQMQKME 390
           DENGDLIHKDPQVVFNEKLRRYAQMQKME
Sbjct: 361 DENGDLIHKDPQVVFNEKLRRYAQMQKME 389

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BLAST of CsGy3G042580 vs. NCBI nr
Match: XP_022975598.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima])

HSP 1 Score: 702.6 bits (1812), Expect = 7.5e-199
Identity = 355/397 (89.42%), Postives = 375/397 (94.46%), Query Frame = 0


Query: 1   MAWRLLVTNLKSTQRQTLTLTNLLRHSS--------PYSTSFLVTKLPKKFRKKRKKQDS 60
           MAWRLLVTNLKS   +TLTLTN LRHSS        P+STSFL+TKLPKKFRKKRKKQ+S
Sbjct: 15  MAWRLLVTNLKSP--ETLTLTNSLRHSSASFFNQKLPFSTSFLITKLPKKFRKKRKKQES 74

Query: 61  PRTKLVQSEPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPR 120
           PRTKLVQSEP+RIS+FERI++TD+ FRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPR
Sbjct: 75  PRTKLVQSEPNRISYFERIVETDSFFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPR 134

Query: 121 GRKVARSIERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLM 180
           GRKVARSIERHPL+FEPYRH DGKMWFGFTEFME L+EEE++IMDSMEMDRVRTVRKLLM
Sbjct: 135 GRKVARSIERHPLMFEPYRHVDGKMWFGFTEFMERLIEEEKRIMDSMEMDRVRTVRKLLM 194

Query: 181 MSANKRIPLTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVS 240
           MSANKRIPL+KIY CRSVFGIPEDFRDRV +YPD+FR+VVEDDGKRVLELVNWDP LAVS
Sbjct: 195 MSANKRIPLSKIYHCRSVFGIPEDFRDRVGKYPDFFRVVVEDDGKRVLELVNWDPLLAVS 254

Query: 241 QLEREFVVNEDKVKRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTL 300
           +LEREFVVNEDK KR FKFPVKHGKDLDL+ DDTRKLNLLNTLPLVSPYSDGSKLELWTL
Sbjct: 255 ELEREFVVNEDKAKRAFKFPVKHGKDLDLDEDDTRKLNLLNTLPLVSPYSDGSKLELWTL 314

Query: 301 EAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNW 360
           EAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNW
Sbjct: 315 EAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNW 374

Query: 361 VVFLKDAYDENGDLIHKDPQVVFNEKLRRYAQMQKME 390
           VVFLKDAY+ENGDLI KDPQVVFNEKLRRYAQMQKME
Sbjct: 375 VVFLKDAYNENGDLIEKDPQVVFNEKLRRYAQMQKME 409

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BLAST of CsGy3G042580 vs. NCBI nr
Match: XP_022936609.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022936610.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])

HSP 1 Score: 696.8 bits (1797), Expect = 4.1e-197
Identity = 352/397 (88.66%), Postives = 372/397 (93.70%), Query Frame = 0


Query: 1   MAWRLLVTNLKSTQRQTLTLTNLLRHSS--------PYSTSFLVTKLPKKFRKKRKKQDS 60
           MAWRLLVTNLKS   +TLTLTN LRHSS        P+STSFL+TKLPKKFRKKRKKQ+S
Sbjct: 1   MAWRLLVTNLKSP--ETLTLTNTLRHSSASFFNQELPFSTSFLITKLPKKFRKKRKKQES 60

Query: 61  PRTKLVQSEPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPR 120
           PRTKLVQSEP+RIS+FERI++TD+ FRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPR
Sbjct: 61  PRTKLVQSEPNRISYFERIVETDSFFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPR 120

Query: 121 GRKVARSIERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLM 180
           GRKVARSIERHPL+FEPYRH DGKMWFGFTEFME L+EEE++IMDSMEMDRVRTVRKLLM
Sbjct: 121 GRKVARSIERHPLIFEPYRHVDGKMWFGFTEFMERLIEEEKRIMDSMEMDRVRTVRKLLM 180

Query: 181 MSANKRIPLTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVS 240
           MSANKRIPL+KIY CRSVFGIPEDFRDRV +YPD+FR+VVEDDGKRVLELVNWDP LAVS
Sbjct: 181 MSANKRIPLSKIYHCRSVFGIPEDFRDRVGKYPDFFRVVVEDDGKRVLELVNWDPLLAVS 240

Query: 241 QLEREFVVNEDKVKRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTL 300
            LEREFV+NEDK KR FKFPVKHGKDLDL+ DDTRKLNLLNTLPLVSPYSDGSKLELWTL
Sbjct: 241 DLEREFVMNEDKAKRAFKFPVKHGKDLDLDEDDTRKLNLLNTLPLVSPYSDGSKLELWTL 300

Query: 301 EAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNW 360
           EAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEF LTKHTYQML KQPRTFYLAGTEMNW
Sbjct: 301 EAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFCLTKHTYQMLRKQPRTFYLAGTEMNW 360

Query: 361 VVFLKDAYDENGDLIHKDPQVVFNEKLRRYAQMQKME 390
           VVFLKDAY+ENGDLI KDPQVVFNEKLRRYAQMQKME
Sbjct: 361 VVFLKDAYNENGDLIEKDPQVVFNEKLRRYAQMQKME 395

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BLAST of CsGy3G042580 vs. NCBI nr
Match: XP_023535672.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 696.0 bits (1795), Expect = 7.0e-197
Identity = 353/397 (88.92%), Postives = 372/397 (93.70%), Query Frame = 0


Query: 1   MAWRLLVTNLKSTQRQTLTLTNLLRHSS--------PYSTSFLVTKLPKKFRKKRKKQDS 60
           MAWRLLVTNLKS   +TLTLTN LRHSS        P+STSFLVTKLPKKFRKKRKKQ+S
Sbjct: 15  MAWRLLVTNLKSP--ETLTLTNTLRHSSASFLNQKLPFSTSFLVTKLPKKFRKKRKKQES 74

Query: 61  PRTKLVQSEPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPR 120
           PRTKLVQSEP+RIS+FERI++TD+ FRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPR
Sbjct: 75  PRTKLVQSEPNRISYFERIVETDSFFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPR 134

Query: 121 GRKVARSIERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLM 180
           GRKVARSIERHPL+FEPYRH DGKMWFGFTEFME L+EEE+ IMDSMEMDRVRTVRKLLM
Sbjct: 135 GRKVARSIERHPLIFEPYRHVDGKMWFGFTEFMERLIEEEKGIMDSMEMDRVRTVRKLLM 194

Query: 181 MSANKRIPLTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVS 240
           MSANKRIPL+KIY CRSVFGIPEDFRDRV +YPD+FR+VVEDDGKRVLELVNWDP LAVS
Sbjct: 195 MSANKRIPLSKIYHCRSVFGIPEDFRDRVGKYPDFFRVVVEDDGKRVLELVNWDPLLAVS 254

Query: 241 QLEREFVVNEDKVKRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTL 300
            LEREFV+NEDK KR FKFPVKHGKDLDL+ DDTRKLNLLNTLPLVSPYSDGSKLELWTL
Sbjct: 255 DLEREFVMNEDKAKRAFKFPVKHGKDLDLDEDDTRKLNLLNTLPLVSPYSDGSKLELWTL 314

Query: 301 EAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNW 360
           EAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQML KQPRTFYLAGTEMNW
Sbjct: 315 EAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLRKQPRTFYLAGTEMNW 374

Query: 361 VVFLKDAYDENGDLIHKDPQVVFNEKLRRYAQMQKME 390
           VVFLKDAY+ENGDLI KDPQVVFNEKLRRYAQM+KME
Sbjct: 375 VVFLKDAYNENGDLIEKDPQVVFNEKLRRYAQMKKME 409

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BLAST of CsGy3G042580 vs. TAIR10
Match: AT4G08940.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 535.4 bits (1378), Expect = 2.9e-152
Identity = 257/363 (70.80%), Postives = 311/363 (85.67%), Query Frame = 0


Query: 27  SSPYSTSFLVTKLPKKFRKKRKKQDSPRTKLVQSEPDRISHFERILQTDTVFRFLFKSKD 86
           +SP+STSFL+TK P K +KKRKK +S RTK +Q E  ++ H E ++  D  FRFL +SK+
Sbjct: 30  TSPFSTSFLITKTPDKLKKKRKKPESARTKSIQHESTKLPHLESLVSRDAHFRFLIRSKE 89

Query: 87  FLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSIERHPLLFEPYRHSDGKMWFGFTEFME 146
           F+SKQPE +LRLDDAGKLYRELGFPRGRKV + I +HPL+F+ YRHSDGK+W GFTEFME
Sbjct: 90  FISKQPERILRLDDAGKLYRELGFPRGRKVTKFIPKHPLIFQTYRHSDGKIWLGFTEFME 149

Query: 147 ELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIPLTKIYRCRSVFGIPEDFRDRVSQYPD 206
           +L++EE+ +M+SME+DRV  VRKLLMM+ +KRI L+KI+  R +FGIPEDFRDRV++YPD
Sbjct: 150 DLLDEEKGLMESMELDRVNCVRKLLMMTKDKRILLSKIHHTRLLFGIPEDFRDRVAKYPD 209

Query: 207 YFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVVNEDKVKRLFKFPVKHGKDLDLNMDDT 266
           YFR+V   DG RVLELVNWD +LAVS+LER F+++EDK KR+FKFPVKHGK+L+L   DT
Sbjct: 210 YFRVVTGGDGNRVLELVNWDTNLAVSELERLFMIDEDKAKRVFKFPVKHGKELELEEKDT 269

Query: 267 RKLNLLNTLPLVSPYSDGSKLELWTLEAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEF 326
           RKLNLLNT PLVSPYSDG KL++W+LEAEKYRVG+VHEFL+LTLEK+ASIHHIVEFK+EF
Sbjct: 270 RKLNLLNTFPLVSPYSDGWKLDVWSLEAEKYRVGIVHEFLNLTLEKRASIHHIVEFKDEF 329

Query: 327 SLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAYDENGDLIHKDPQVVFNEKLRRYAQMQ 386
           SLT+ TYQML KQ  +FYLAGTEMNW VFLKDAYDENG L+ KDPQVVFNEKL +YA MQ
Sbjct: 330 SLTRQTYQMLKKQSMSFYLAGTEMNWTVFLKDAYDENGVLVSKDPQVVFNEKLYKYADMQ 389

Query: 387 KME 390
           +ME
Sbjct: 390 QME 392

[Close]

BLAST of CsGy3G042580 vs. TAIR10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 185.3 bits (469), Expect = 7.3e-47
Identity = 117/323 (36.22%), Postives = 174/323 (53.87%), Query Frame = 0


Query: 68  FERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSIERHPLLF 127
           F+ ++Q D   + +   +  L  QP+ ++ L   GK  R+LG  + R+    + ++P +F
Sbjct: 84  FDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVF 143

Query: 128 EPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIPLTKIYRC 187
           E        + F  T   E L  +E +I + +E   V  +RKL+MMS +KRI L KI   
Sbjct: 144 EIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHL 203

Query: 188 RSVFGIPEDFRDRVSQ-YPDYFRLVVEDDGKRVLELVNWDPSLAVSQLE--------REF 247
           ++  G+P +FRD + Q YP YFR+V    G   LEL +WDP LAVS  E        RE 
Sbjct: 204 KTDLGLPLEFRDTICQRYPQYFRVVPTPRGP-ALELTHWDPELAVSAAELSEDDNRTRES 263

Query: 248 VVNEDKVKRLFKF-PVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKY 307
                 + R  KF  VK  + L+L+  +TRK++    +  +SPY D S L   TLE EK+
Sbjct: 264 EERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKH 323

Query: 308 RVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLK 367
             GV+HE LSLT EK+  + H+  F+EEF  ++    ML++ P  FY++       VFL+
Sbjct: 324 ACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLR 383

Query: 368 DAYDENGDLIHKDPQVVFNEKLR 381
           +AY  N +LI KDP  +  EK+R
Sbjct: 384 EAY-RNSELIDKDPLTLVKEKMR 404

[Close]

BLAST of CsGy3G042580 vs. TAIR10
Match: AT5G21970.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-38
Identity = 93/283 (32.86%), Postives = 154/283 (54.42%), Query Frame = 0


Query: 106 RELGFPRGRKVARSIERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVR 165
           R++  P+  K++  I + P LFE Y+   G +W G TE  E+L++E  K+++        
Sbjct: 99  RQINLPKPHKISDFIRKSPKLFELYKDQRGVLWCGLTEGGEDLLDEHDKLLEENGDKAAE 158

Query: 166 TVRKLLMMSANKRIPLTKIYRCRSVFGIPEDFR-DRVSQYPDYFRLVVEDDGKRVLELVN 225
            V + LMMS +K++PL KI   R  FG+P DFR + V  +P +F++V   DG+  LELV+
Sbjct: 159 HVTRCLMMSVDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEEYLELVS 218

Query: 226 WDPSLAVSQLEREFV-VNEDKVKR----LFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVS 285
           W+P+ A+++LE++ + + ED   +       FP+K             K+        +S
Sbjct: 219 WNPAWAITELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMYRYRGKIEHFQKRSYLS 278

Query: 286 PYSDGSKLELWTLEAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQ 345
           PY+D   LE  + E +K  + V+HE LS TLEK+    H+  F+ EF + +   ++ LK 
Sbjct: 279 PYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKH 338

Query: 346 PRTFYLAGTEMNWVVFLKDAYDENGDLIHKDPQVVFNEKLRRY 383
              FY++     + VFL + Y E  +LI K P +++ EKL ++
Sbjct: 339 CGIFYVSERGKRFSVFLTEGY-EGPELIEKCPLILWKEKLLKF 380

[Close]

BLAST of CsGy3G042580 vs. TAIR10
Match: AT2G31290.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 132.9 bits (333), Expect = 4.3e-31
Identity = 100/303 (33.00%), Postives = 145/303 (47.85%), Query Frame = 0


Query: 85  KDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSIERHPLLFEPYRHSDGKMWFGFTEF 144
           K+ + + P  V  +    K ++ L      K    ++++P  F  Y  +D + +   T+ 
Sbjct: 51  KNIILRCPNQVASIKFLQKKFKTLDLQ--GKALNWLKKYPCCFHVYLEND-EYYCRLTKP 110

Query: 145 MEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIPLTKIYRCRSVFGIPEDFRDR-VSQ 204
           M  L+EEE  + D+ E      + KLLM+S N+R+ + K+   +  FG P+D+  R V +
Sbjct: 111 MMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRLNVVKLNEFKRSFGFPDDYVIRIVPK 170

Query: 205 YPDYFRLVVEDDGK--RVLELVNWDPSLAVSQLEREFVVNEDKVKRLFKFPVKHGKDLDL 264
           Y D FRLV     K    +EL+ W P LAVS +E        +       P    K  + 
Sbjct: 171 YSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEAAAKKCGSEPSFSCSLPSTWTKPWER 230

Query: 265 NMDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKYRVGVVHEFLSLTLEKKASIHHIVE 324
            M+        N  P +SPY D   L   + E+EK  VG+VHE LSLTL KK SI  +  
Sbjct: 231 FME-------FNAFPYISPYEDHGDLVEGSKESEKRSVGLVHELLSLTLWKKLSIVKLSH 290

Query: 325 FKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAYDENGDLIHKDPQVVFNEKLRR 384
           FK EF L +    MLLK P  FY+        V L++ Y+   +LIHKDP VV  +K   
Sbjct: 291 FKREFGLPEKLNGMLLKHPGIFYVGNKYQVHTVILREGYN-GSELIHKDPLVVVKDKFGE 342

[Close]

BLAST of CsGy3G042580 vs. TAIR10
Match: AT5G62990.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 122.9 bits (307), Expect = 4.5e-28
Identity = 107/375 (28.53%), Postives = 178/375 (47.47%), Query Frame = 0


Query: 32  TSFLVTKLPKKFRKKRKKQDSPRTKLVQSEPDRISHFERILQTDTV---------FRFLF 91
           +SF +  +P + R+      +   KL     +      +I+++ ++          RF+ 
Sbjct: 20  SSFFLPSIPLEIRRSNVTTKTSSKKLGSLSLNISCSAHKIVRSPSLDRHVVKQNRVRFVQ 79

Query: 92  KSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSIERHPLLFEPYRHSDGKMWFGFT 151
           K    L  +P+H + ++   K    L       +   I R+P +FE +      +    T
Sbjct: 80  KLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFELFTTPTPHLPMNAT 139

Query: 152 EFMEELMEEERKIMDSMEM----------DRVRT-VRKLLMMSANKRIPLTKIYRCRSVF 211
           + + +L         S+ M          D++ T ++KLLM+S+++R+ L+K+      F
Sbjct: 140 KPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSHRRLLLSKLVHIAPDF 199

Query: 212 GIPEDFRDRV-SQYPDYFRLVVEDDGKRVLELVNWDPSLA----VSQLEREFVVNED-KV 271
           G P +FR R+ + YPD F+ V    G R LELV+ DP LA      +++R  +V+   K 
Sbjct: 200 GFPPNFRSRLCNDYPDKFKTVDTSYG-RALELVSSDPELANQMPSPEVDRGLIVDRPLKF 259

Query: 272 KRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSK-LELWTLEAEKYRVGVVHE 331
           KRL        + L+L       L      P V PY   S  L   ++EAEK    VV E
Sbjct: 260 KRL-----NLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDYLASESIEAEKRACAVVRE 319

Query: 332 FLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAYDENG 380
            L LT+EK+  I H+  F++EFSL      ++++ P  FY++   M   VFL +AY++NG
Sbjct: 320 VLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVSIKGMRDSVFLVEAYNDNG 379

[Close]

BLAST of CsGy3G042580 vs. Swiss-Prot
Match: sp|A0MFS5|WTF1_ARATH (Protein WHAT'S THIS FACTOR 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-45
Identity = 117/323 (36.22%), Postives = 174/323 (53.87%), Query Frame = 0


Query: 68  FERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSIERHPLLF 127
           F+ ++Q D   + +   +  L  QP+ ++ L   GK  R+LG  + R+    + ++P +F
Sbjct: 84  FDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVF 143

Query: 128 EPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIPLTKIYRC 187
           E        + F  T   E L  +E +I + +E   V  +RKL+MMS +KRI L KI   
Sbjct: 144 EIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHL 203

Query: 188 RSVFGIPEDFRDRVSQ-YPDYFRLVVEDDGKRVLELVNWDPSLAVSQLE--------REF 247
           ++  G+P +FRD + Q YP YFR+V    G   LEL +WDP LAVS  E        RE 
Sbjct: 204 KTDLGLPLEFRDTICQRYPQYFRVVPTPRGP-ALELTHWDPELAVSAAELSEDDNRTRES 263

Query: 248 VVNEDKVKRLFKF-PVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKY 307
                 + R  KF  VK  + L+L+  +TRK++    +  +SPY D S L   TLE EK+
Sbjct: 264 EERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKH 323

Query: 308 RVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLK 367
             GV+HE LSLT EK+  + H+  F+EEF  ++    ML++ P  FY++       VFL+
Sbjct: 324 ACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLR 383

Query: 368 DAYDENGDLIHKDPQVVFNEKLR 381
           +AY  N +LI KDP  +  EK+R
Sbjct: 384 EAY-RNSELIDKDPLTLVKEKMR 404

[Close]

BLAST of CsGy3G042580 vs. Swiss-Prot
Match: sp|Q65XL5|WTF1_ORYSJ (Protein WHAT'S THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.3e-45
Identity = 117/323 (36.22%), Postives = 174/323 (53.87%), Query Frame = 0


Query: 68  FERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSIERHPLLF 127
           F+ ++Q D   + + K ++ L   P+ V+ L D G+  R+LG  R R++   ++R P +F
Sbjct: 69  FDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIALLKRFPGVF 128

Query: 128 EPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIPLTKIYRC 187
           E        + F  T   E L  +E  + +  E   V  +RKLLMMS +KRI + KI   
Sbjct: 129 EVVEEGVYSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKRILIEKIAHL 188

Query: 188 RSVFGIPEDFRDRVS-QYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLE--------REF 247
           ++  G+P +FRD +  +YP YFR+V  D G   LEL +WDP LAVS  E        RE 
Sbjct: 189 KNDLGLPPEFRDTICLRYPQYFRVVQMDRGPG-LELTHWDPELAVSAAEVAEEENRAREE 248

Query: 248 VVNEDKVKRLFKF-PVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKY 307
                 + R  KF  VK  + L L+  + R++     +P +SPYSD S L   + E EK+
Sbjct: 249 QERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHLRSGSAEKEKH 308

Query: 308 RVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLK 367
             GVVHE LSLTLEK+  + H+  F+EEF  ++    ML++ P  FY++       VFL+
Sbjct: 309 ACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSLKGDRDSVFLR 368

Query: 368 DAYDENGDLIHKDPQVVFNEKLR 381
           +AY +N  L+ K   V+  EK+R
Sbjct: 369 EAY-KNSQLVEKSKLVLLKEKMR 389

[Close]

BLAST of CsGy3G042580 vs. Swiss-Prot
Match: sp|B6TTV8|WTF1_MAIZE (Protein WHAT'S THIS FACTOR 1 OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.6e-43
Identity = 112/323 (34.67%), Postives = 173/323 (53.56%), Query Frame = 0


Query: 68  FERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSIERHPLLF 127
           F+ ++Q D   + + K ++ L  QP+ V+ L + G+  R+LG  R R++   + R P +F
Sbjct: 63  FDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRRFPGVF 122

Query: 128 EPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIPLTKIYRC 187
           +        + F  T   E L  +E ++ +  E   V  +RKLLMMS  KRI + K+   
Sbjct: 123 DVVEEGVYSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKRILIEKVAHL 182

Query: 188 RSVFGIPEDFRDRVS-QYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLE--------REF 247
           +   G+P +FRD V  +YP YFR+V  D G   LEL +WDP LAVS  E        RE 
Sbjct: 183 KHDLGLPPEFRDTVCLRYPQYFRVVRMDRGP-ALELTHWDPELAVSAAELAEEESRAREA 242

Query: 248 VVNEDKVKRLFKF-PVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKY 307
                 + R  KF  V+  K L L   + R++     +P +SPY+D S L   + E EK+
Sbjct: 243 EERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSHLRSGSDEKEKH 302

Query: 308 RVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLK 367
             GVVHE LSLT+EK+  + H+  F+EEF  ++    M+++ P  FY++       VFL+
Sbjct: 303 ACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVSFKGDRDSVFLR 362

Query: 368 DAYDENGDLIHKDPQVVFNEKLR 381
           +AY ++  L+ K+  V+  EK+R
Sbjct: 363 EAY-KDSQLVEKNQLVLLKEKMR 383

[Close]

BLAST of CsGy3G042580 vs. Swiss-Prot
Match: sp|Q689D6|RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.1e-23
Identity = 97/352 (27.56%), Postives = 172/352 (48.86%), Query Frame = 0


Query: 58  VQSEPDRISH--FERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFP-RGR 117
           +  + DR+    ++  ++ +   R + K    +  QP H + +     L R LG   +  
Sbjct: 40  IPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQH 99

Query: 118 KVARSIERHPLLFEPYRHSDGKMWFG--FTEFMEELMEEERKIMDSMEMDRVRTVRKLLM 177
           +    + + P +FE Y H   ++ +     + ++++  E   ++D +  D V  +RKL+M
Sbjct: 100 EPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIP-DAVTRLRKLVM 159

Query: 178 MSANKRIPLTKIYRCRSVFGIPEDFR-DRVSQYPDYFRLV-VEDDGKRVLELVNWDPSLA 237
           MS   RI L  +   R+ FG+PEDF    + ++P +FRL+  E+   + +E+V  DP+L+
Sbjct: 160 MSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLS 219

Query: 238 VSQLEREFVVNEDKVKRL------FKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDG 297
           +  +ER   + E + K +      F F V       +       +     LP  SPY D 
Sbjct: 220 ICAIERVREI-EYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDI 279

Query: 298 SKLELWTLEA----EKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQP 357
           S  +L ++EA    EK  V  +HE LSLT+EKK ++  I  F+   +L K   + LL+  
Sbjct: 280 SGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQ 339

Query: 358 RTFYLAGTEMNW----VVFLKDAYDENGDLIHKDPQVVFNEKLRRYAQMQKM 389
             FY++ T  N+     VFL++ Y + G+L+  +P  V+  + RR A++  M
Sbjct: 340 GIFYIS-TRGNYGKLHTVFLREGY-KRGELV--EPNDVYLAR-RRLAELVLM 384

[Close]

BLAST of CsGy3G042580 vs. TrEMBL
Match: tr|A0A0A0LJK0|A0A0A0LJK0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889735 PE=4 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 4.3e-219
Identity = 387/389 (99.49%), Postives = 388/389 (99.74%), Query Frame = 0


Query: 1   MAWRLLVTNLKSTQRQTLTLTNLLRHSSPYSTSFLVTKLPKKFRKKRKKQDSPRTKLVQS 60
           MAWRLLVTNLKSTQRQTLTLTNLLRHSSPYSTSFLVTKLPKKFRKKRKK DSPRTKLVQS
Sbjct: 1   MAWRLLVTNLKSTQRQTLTLTNLLRHSSPYSTSFLVTKLPKKFRKKRKKHDSPRTKLVQS 60

Query: 61  EPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI 120
           EPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI
Sbjct: 61  EPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI 120

Query: 121 ERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIP 180
           ERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIP
Sbjct: 121 ERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIP 180

Query: 181 LTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVV 240
           LTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVV
Sbjct: 181 LTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVV 240

Query: 241 NEDKVKRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKYRVG 300
           NEDKVKRLFKFPVKHGKDLDLNMDDTR+LNLLNTLPLVSPYSDGSKLELWTLEAEKYRVG
Sbjct: 241 NEDKVKRLFKFPVKHGKDLDLNMDDTRRLNLLNTLPLVSPYSDGSKLELWTLEAEKYRVG 300

Query: 301 VVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY 360
           VVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY
Sbjct: 301 VVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY 360

Query: 361 DENGDLIHKDPQVVFNEKLRRYAQMQKME 390
           DENGDLIHKDPQVVFNEKLRRYAQMQKME
Sbjct: 361 DENGDLIHKDPQVVFNEKLRRYAQMQKME 389

[Close]

BLAST of CsGy3G042580 vs. TrEMBL
Match: tr|A0A1S3CQQ5|A0A1S3CQQ5_CUCME (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103503702 PE=4 SV=1)

HSP 1 Score: 744.6 bits (1921), Expect = 1.1e-211
Identity = 371/389 (95.37%), Postives = 385/389 (98.97%), Query Frame = 0


Query: 1   MAWRLLVTNLKSTQRQTLTLTNLLRHSSPYSTSFLVTKLPKKFRKKRKKQDSPRTKLVQS 60
           MAWRLLVTNLKSTQ QTLTLTNLLRHSSP+STSFLVTKLPKKFRKKRKK +SPRTKLVQS
Sbjct: 1   MAWRLLVTNLKSTQTQTLTLTNLLRHSSPFSTSFLVTKLPKKFRKKRKKHESPRTKLVQS 60

Query: 61  EPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI 120
           EPDRISHFERILQTD+ FRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI
Sbjct: 61  EPDRISHFERILQTDSFFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI 120

Query: 121 ERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIP 180
           ERHPLLFEPYRHSDGKMWFGFTEFMEEL+EEER+IMDSMEMDRVRTVRKLLMMSANKRIP
Sbjct: 121 ERHPLLFEPYRHSDGKMWFGFTEFMEELIEEEREIMDSMEMDRVRTVRKLLMMSANKRIP 180

Query: 181 LTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVV 240
           LTKIYRCRSVFGIPEDFRDRVS+YPDYFRLVVEDDGKRVLELVNW+PSLAVSQLEREFVV
Sbjct: 181 LTKIYRCRSVFGIPEDFRDRVSKYPDYFRLVVEDDGKRVLELVNWEPSLAVSQLEREFVV 240

Query: 241 NEDKVKRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKYRVG 300
           NEDKVKR+F FPVKHG+DLDL++DDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKYR+G
Sbjct: 241 NEDKVKRMFMFPVKHGRDLDLDLDDTRKLNLLNTLPLVSPYSDGSKLELWTLEAEKYRLG 300

Query: 301 VVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY 360
           +VHEFLSLTLEK+ASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY
Sbjct: 301 LVHEFLSLTLEKRASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY 360

Query: 361 DENGDLIHKDPQVVFNEKLRRYAQMQKME 390
           DENGDLIHKDPQVVFNEKLRRYAQMQKME
Sbjct: 361 DENGDLIHKDPQVVFNEKLRRYAQMQKME 389

[Close]

BLAST of CsGy3G042580 vs. TrEMBL
Match: tr|A0A2I4GF33|A0A2I4GF33_9ROSI (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Juglans regia OX=51240 GN=LOC109007321 PE=4 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 6.8e-172
Identity = 298/363 (82.09%), Postives = 337/363 (92.84%), Query Frame = 0


Query: 27  SSPYSTSFLVTKLPKKFRKKRKKQDSPRTKLVQSEPDRISHFERILQTDTVFRFLFKSKD 86
           SSP+STSFLVTK PKKF+KKR K++SPRT+LVQSEP+RISHFE I++ D   RF+ KSKD
Sbjct: 45  SSPFSTSFLVTKTPKKFKKKRTKKESPRTQLVQSEPNRISHFEHIVERDAFLRFVTKSKD 104

Query: 87  FLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSIERHPLLFEPYRHSDGKMWFGFTEFME 146
           FLSKQPEHVLRLDDAGKL+RELGFPRGRKV+R IE++PLLF+ YRH+DGKMWFGFTE ME
Sbjct: 105 FLSKQPEHVLRLDDAGKLHRELGFPRGRKVSRFIEKYPLLFQAYRHTDGKMWFGFTELME 164

Query: 147 ELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIPLTKIYRCRSVFGIPEDFRDRVSQYPD 206
           +L+EEER I DSME+DRV TVRKLLMMSANKRIPL+KIY CRS+FGIPEDFRDRV++YP+
Sbjct: 165 DLLEEERAIADSMEVDRVNTVRKLLMMSANKRIPLSKIYHCRSLFGIPEDFRDRVAKYPN 224

Query: 207 YFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVVNEDKVKRLFKFPVKHGKDLDLNMDDT 266
           YFR++VE DGKRVLEL+NWDP LAVS LEREF+V+EDKVKR FKFPVKHGKDLDL+ DDT
Sbjct: 225 YFRIIVEGDGKRVLELLNWDPLLAVSALEREFIVDEDKVKRAFKFPVKHGKDLDLDEDDT 284

Query: 267 RKLNLLNTLPLVSPYSDGSKLELWTLEAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEF 326
           RKLN LNTLPLVSPYSDGS+L+LWTLEAEKYRVGV+HEFLSLTLEK+ASIHH+VEFKEEF
Sbjct: 285 RKLNFLNTLPLVSPYSDGSRLDLWTLEAEKYRVGVLHEFLSLTLEKRASIHHVVEFKEEF 344

Query: 327 SLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAYDENGDLIHKDPQVVFNEKLRRYAQMQ 386
           SL KHTY+MLLKQPRTFYLAGTEMNWVVFLKDAYDENG LI KDPQVVFNEKL + AQM+
Sbjct: 345 SLNKHTYRMLLKQPRTFYLAGTEMNWVVFLKDAYDENGVLIKKDPQVVFNEKLYKLAQMR 404

Query: 387 KME 390
           ++E
Sbjct: 405 ELE 407

[Close]

BLAST of CsGy3G042580 vs. TrEMBL
Match: tr|A0A2P5BF44|A0A2P5BF44_PARAD (Plant organelle RNA recognition domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_244600 PE=4 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 8.3e-170
Identity = 308/400 (77.00%), Postives = 347/400 (86.75%), Query Frame = 0


Query: 1   MAWRLL---VTNLKSTQRQTLTLTN----------LLRHSSPYSTSFLVTKLPKKFRKKR 60
           MAWRL    ++N KS+Q  T T+ N              +S +STSFLVTK PKKFRKKR
Sbjct: 1   MAWRLFLSRISNPKSSQTSTFTIFNPRAPFQNPNYFSLLASHFSTSFLVTKTPKKFRKKR 60

Query: 61  KKQDSPRTKLVQSEPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRE 120
           KK++SPRTKLVQSEP+R+   ERI++ D  FRFL +SK+FLSKQP HVLRLDDAGKLYRE
Sbjct: 61  KKKESPRTKLVQSEPNRVPALERIVERDAFFRFLIRSKEFLSKQPHHVLRLDDAGKLYRE 120

Query: 121 LGFPRGRKVARSIERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTV 180
           LGFPRGRKVAR I+RHPL+FE YRH DGKMW GFT+FMEEL+EEER IMDSME+DRV  V
Sbjct: 121 LGFPRGRKVARFIQRHPLIFETYRHDDGKMWLGFTDFMEELLEEERAIMDSMEVDRVAKV 180

Query: 181 RKLLMMSANKRIPLTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDP 240
           RKLLMMSA KRIPL+KIY CR +FGIP+DFRDRV++YP+YFR+VVEDDG+RVLELVNWDP
Sbjct: 181 RKLLMMSAGKRIPLSKIYHCRLLFGIPDDFRDRVAKYPNYFRVVVEDDGRRVLELVNWDP 240

Query: 241 SLAVSQLEREFVVNEDKVKRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKL 300
           SLAVS LE EF+V+E+KVKR FKF VKHGKDLDL+ +DTRKLNLLNTLPLVSPYSDGSKL
Sbjct: 241 SLAVSALESEFMVDEEKVKRAFKFAVKHGKDLDLDENDTRKLNLLNTLPLVSPYSDGSKL 300

Query: 301 ELWTLEAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAG 360
           +LWTLEAEKYRVGV+HEFLSLTLEK+ASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAG
Sbjct: 301 DLWTLEAEKYRVGVLHEFLSLTLEKRASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAG 360

Query: 361 TEMNWVVFLKDAYDENGDLIHKDPQVVFNEKLRRYAQMQK 388
           TEMNWVVFLKDAYDENG LI+K PQV F EKL ++AQMQ+
Sbjct: 361 TEMNWVVFLKDAYDENGVLINKGPQVDFTEKLFKHAQMQE 400

[Close]

BLAST of CsGy3G042580 vs. TrEMBL
Match: tr|A0A2P5BNI3|A0A2P5BNI3_9ROSA (Plant organelle RNA recognition domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_314860 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.1e-169
Identity = 308/402 (76.62%), Postives = 346/402 (86.07%), Query Frame = 0


Query: 1   MAWRLL---VTNLKSTQRQTLTLTNLLRH----------SSPYSTSFLVTKLPKKFRKKR 60
           MAWRL    + N K +Q  T T+ N +            +S +STSFLVTK PKKFRKKR
Sbjct: 1   MAWRLFLSRIPNPKRSQTSTFTIFNPIAPLQNPNYFSLLASHFSTSFLVTKTPKKFRKKR 60

Query: 61  KKQDSPRTKLVQSEPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRE 120
           KK++SPRTKLVQSEP+R+   ERI++ D  FRFL +SK+FLSKQP HVLRLDDAGKLYRE
Sbjct: 61  KKKESPRTKLVQSEPNRVPALERIVERDAFFRFLIRSKEFLSKQPHHVLRLDDAGKLYRE 120

Query: 121 LGFPRGRKVARSIERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTV 180
           LGFPRGRKVAR I+RHPL+FE YRH DGKMW GFT+FMEEL+EEER IMDSME+DRV  V
Sbjct: 121 LGFPRGRKVARFIQRHPLIFETYRHDDGKMWLGFTDFMEELLEEERAIMDSMEVDRVAKV 180

Query: 181 RKLLMMSANKRIPLTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDP 240
           RKLLMMSA KRIPL+KIY CR +FGIP+DFRDRV++YP+YFR+VVEDDG+RVLELVNWDP
Sbjct: 181 RKLLMMSAGKRIPLSKIYHCRLLFGIPDDFRDRVTKYPNYFRVVVEDDGRRVLELVNWDP 240

Query: 241 SLAVSQLEREFVVNEDKVKRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKL 300
           SL+VS LE EF+V+E+KVKR FKF VKHGKDLDL+ DDTRKLNLLNTLPLVSPYSDGSKL
Sbjct: 241 SLSVSALESEFMVDEEKVKRAFKFAVKHGKDLDLDEDDTRKLNLLNTLPLVSPYSDGSKL 300

Query: 301 ELWTLEAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAG 360
           +LWTLEAEKYRVGV+HEFLSLTLEK+ASIHHIVEFKE FSLTKHTYQMLLKQPRTFYLAG
Sbjct: 301 DLWTLEAEKYRVGVLHEFLSLTLEKRASIHHIVEFKEVFSLTKHTYQMLLKQPRTFYLAG 360

Query: 361 TEMNWVVFLKDAYDENGDLIHKDPQVVFNEKLRRYAQMQKME 390
           TEMNWVVFLKDAYDENG LI KDPQV F EKL ++AQMQ+ E
Sbjct: 361 TEMNWVVFLKDAYDENGVLIKKDPQVDFTEKLFKHAQMQERE 402

The following BLAST results are available for this feature:

BLAST of CsGy3G042580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136286.1	6.5e-219	99.49	PREDICTED: uncharacterized protein LOC101212691 [Cucumis sativus] >KGN60216.1 hy...	[more]
XP_008466225.1	1.7e-211	95.37	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]	[more]
XP_022975598.1	7.5e-199	89.42	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima]	[more]
XP_022936609.1	4.1e-197	88.66	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022936610.1 protei...	[more]
XP_023535672.1	7.0e-197	88.92	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G042580 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08940.1	2.9e-152	70.80	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G01037.1	7.3e-47	36.22	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G21970.1	2.8e-38	32.86	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT2G31290.1	4.3e-31	33.00	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G62990.1	4.5e-28	28.53	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

BLAST of CsGy3G042580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A0MFS5\|WTF1_ARATH	1.3e-45	36.22	Protein WHAT'S THIS FACTOR 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g0103...	[more]
sp\|Q65XL5\|WTF1_ORYSJ	2.3e-45	36.22	Protein WHAT'S THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
sp\|B6TTV8\|WTF1_MAIZE	1.6e-43	34.67	Protein WHAT'S THIS FACTOR 1 OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1	[more]
sp\|Q689D6\|RPD1_ARATH	4.1e-23	27.56	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]

BLAST of CsGy3G042580 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJK0\|A0A0A0LJK0_CUCSA	4.3e-219	99.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889735 PE=4 SV=1	[more]
tr\|A0A1S3CQQ5\|A0A1S3CQQ5_CUCME	1.1e-211	95.37	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103503702 PE=4...	[more]
tr\|A0A2I4GF33\|A0A2I4GF33_9ROSI	6.8e-172	82.09	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Juglans regia OX=51240 GN=LOC109007321 PE...	[more]
tr\|A0A2P5BF44\|A0A2P5BF44_PARAD	8.3e-170	77.00	Plant organelle RNA recognition domain containing protein OS=Parasponia anderson...	[more]
tr\|A0A2P5BNI3\|A0A2P5BNI3_9ROSA	1.1e-169	76.62	Plant organelle RNA recognition domain containing protein OS=Trema orientalis OX...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021099	PORR_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G042580.1	CsGy3G042580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 64..387 e-value: 6.5E-98 score: 327.6
None	No IPR available	PANTHER	PTHR31476:SF14	SUBFAMILY NOT NAMED	coord: 19..389
None	No IPR available	PANTHER	PTHR31476	FAMILY NOT NAMED	coord: 19..389

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G042580	Cla023015	Watermelon (97103) v1	cgybwmB254
CsGy3G042580	MELO3C003570	Melon (DHL92) v3.5.1	cgybmeB185
CsGy3G042580	ClCG11G014140	Watermelon (Charleston Gray)	cgybwcgB183
CsGy3G042580	CSPI03G45110	Wild cucumber (PI 183967)	cgybcpiB111
CsGy3G042580	CmaCh09G005590	Cucurbita maxima (Rimu)	cgybcmaB285
CsGy3G042580	CmoCh09G005500	Cucurbita moschata (Rifu)	cgybcmoB258
CsGy3G042580	Lsi04G022370	Bottle gourd (USVL1VR-Ls)	cgyblsiB175
CsGy3G042580	Cp4.1LG06g04330	Cucurbita pepo (Zucchini)	cgybcpeB436
CsGy3G042580	MELO3C003570.2	Melon (DHL92) v3.6.1	cgybmedB186
CsGy3G042580	CsaV3_3G047540	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G042580	Cla97C11G220130	Watermelon (97103) v2	cgybwmbB182
CsGy3G042580	Bhi09G002067	Wax gourd	cgybwgoB329
CsGy3G042580	Carg02973	Silver-seed gourd	carcgybB0632

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G042580	Cucumber (Gy14) v2	cgybcgybB047
CsGy3G042580	Cucurbita maxima (Rimu)	cgybcmaB359
CsGy3G042580	Cucurbita moschata (Rifu)	cgybcmoB329
CsGy3G042580	Cucurbita moschata (Rifu)	cgybcmoB398
CsGy3G042580	Cucurbita pepo (Zucchini)	cgybcpeB297
CsGy3G042580	Cucurbita pepo (Zucchini)	cgybcpeB388
CsGy3G042580	Cucumber (Chinese Long) v2	cgybcuB103
CsGy3G042580	Cucumber (Chinese Long) v2	cgybcuB110
CsGy3G042580	Bottle gourd (USVL1VR-Ls)	cgyblsiB224
CsGy3G042580	Melon (DHL92) v3.5.1	cgybmeB171
CsGy3G042580	Melon (DHL92) v3.6.1	cgybmedB171
CsGy3G042580	Watermelon (Charleston Gray)	cgybwcgB243
CsGy3G042580	Watermelon (97103) v1	cgybwmB195
CsGy3G042580	Wild cucumber (PI 183967)	cgybcpiB102
CsGy3G042580	Silver-seed gourd	carcgybB0062
CsGy3G042580	Silver-seed gourd	carcgybB0995
CsGy3G042580	Cucumber (Chinese Long) v3	cgybcucB111
CsGy3G042580	Watermelon (97103) v2	cgybwmbB236
CsGy3G042580	Wax gourd	cgybwgoB305