CsGy3G041180 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G041180
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPentatricopeptide repeat (PPR) superfamily protein
LocationChr3 : 38519002 .. 38520606 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTGATCAAATCGAAGCTTAATCTTCCTCCCTTTCTATCATCTCTCTCCCACCGTATTCAGAATCACCGTTCCTTCTCATCCTCTCCTTCAATTTCAGACCCTCCCCTTCAAGACGACCTCGCCACCGATTCACCTCAAAATGCCTCAATTCCTCTCCTCTCGCCGGAGCAAATCCAGGTTTCCGAAAAATTCCACGCTCTAATCAAGGAATACTATCGAAGAAATCCCGGTCCCGATTCAACTCCACCATGCCCTAATTTCACTATTTCCTCTCTTTCCAACGACCTGTCCCAAATCTCAGCCCCCCATTCCGTCTCTCCGGCCGTCGTTCGTTACGTCATCGAGAAATCCGGTGCCGTCCGTCATGGCATCCCTTTTCTTCCAGCCCTCGCGTTCTTCAACTGGGCGACGGCGGGAGAGGGTTTCGAGCACTCTCCACAGCCATACAACGAGATGATTGACCTAGCCGGTAAGGTAAAACAATTTGGATTAGCTTGGTATTTGATTGATTTGATGAAAGCTAGAAATGTAGAAATTACTGTTGTAACTTTCTCCATGCTTGTGCGGCGGTATGTGAGAGCTGGATTGGCGGCGGAGGCAGTTCATGCGTTTAATCGCATGGAGGACTATGGCTGTAATGCTGACATCATTGCTTTTTCCAATGTTATCAGCATTCTGTGCAAGAAGAGAAGGGCAGTTGAAGCCCAATCATTTTTTGATAATCTAAAACATAAATTCGAACCTGATGTTATTGTGTACACTAGCTTAGTTCATGGATGGTGTCGAGCAGGTGATATCTCAGAGGCTGAAAGTGTATTTAGAGAGATGAAGATGGCAGGTATTAGCCCTAATGTTTATACTTATAGCATTGTGATTGATGCCTTGTGTAGATCTGGTCAAATTACTCGTGCCCATGATGTTTTCGCTGAGATGCTCGATGCTGGTTGCAATCCAAATTCAGTTACATTTAACAATCTTATAAGAGTTCATCTGAGAGCTGGTAGAACAGAGAAGGTGCTGCAAGTTTATAACCAAATGAAGAGATTGCGTTGTGCTGCTGACTTAATTACTTATAACTTCCTCATCGAAACTCATTGCAAGGATGACAATCTTGGAGAGGCTATAAAAGTTCTCAACTCAATGGCTAAGAATGATTGCACCCCCAATGCATCGTCTTTTAACCCTATATTCAGGTGTATTGCAAAGTCGCAAGATGTAAACGGTGCACATCGGATGTTTGCTAGGATGAAGGAAGTAGGTTGTAAGCCAAATACAGTGACATACAATATCTTGATGCGAATGTTTGCCGTACCGAAATCTGCTGATATGATTTTCAAGTTGAAGAAGGAGATGGACGAGGAAGAAGTTGAGCCTAACTTTAATACATACCGAGAACTGATAGCATTATATTGTGGGATGGGGCATTGGAACCATGCTTACATGTTCTTCAGGGAAATGATTGATGAGAAATGCATAAAACCCAGCATGCCTTTGTATAAGATGGTTTTGGAAGAGCTAAGAAAGGCAGGACAGTTGAAGAAGCATGAGGAATTGGTGGATAAGATGGTTGAGAGAGGGTTCGCCTCAAGGAACCTGTAG

mRNA sequence

ATGGCTTTGATCAAATCGAAGCTTAATCTTCCTCCCTTTCTATCATCTCTCTCCCACCGTATTCAGAATCACCGTTCCTTCTCATCCTCTCCTTCAATTTCAGACCCTCCCCTTCAAGACGACCTCGCCACCGATTCACCTCAAAATGCCTCAATTCCTCTCCTCTCGCCGGAGCAAATCCAGGTTTCCGAAAAATTCCACGCTCTAATCAAGGAATACTATCGAAGAAATCCCGGTCCCGATTCAACTCCACCATGCCCTAATTTCACTATTTCCTCTCTTTCCAACGACCTGTCCCAAATCTCAGCCCCCCATTCCGTCTCTCCGGCCGTCGTTCGTTACGTCATCGAGAAATCCGGTGCCGTCCGTCATGGCATCCCTTTTCTTCCAGCCCTCGCGTTCTTCAACTGGGCGACGGCGGGAGAGGGTTTCGAGCACTCTCCACAGCCATACAACGAGATGATTGACCTAGCCGGTAAGGTAAAACAATTTGGATTAGCTTGGTATTTGATTGATTTGATGAAAGCTAGAAATGTAGAAATTACTGTTGTAACTTTCTCCATGCTTGTGCGGCGGTATGTGAGAGCTGGATTGGCGGCGGAGGCAGTTCATGCGTTTAATCGCATGGAGGACTATGGCTGTAATGCTGACATCATTGCTTTTTCCAATGTTATCAGCATTCTGTGCAAGAAGAGAAGGGCAGTTGAAGCCCAATCATTTTTTGATAATCTAAAACATAAATTCGAACCTGATGTTATTGTGTACACTAGCTTAGTTCATGGATGGTGTCGAGCAGGTGATATCTCAGAGGCTGAAAGTGTATTTAGAGAGATGAAGATGGCAGGTATTAGCCCTAATGTTTATACTTATAGCATTGTGATTGATGCCTTGTGTAGATCTGGTCAAATTACTCGTGCCCATGATGTTTTCGCTGAGATGCTCGATGCTGGTTGCAATCCAAATTCAGTTACATTTAACAATCTTATAAGAGTTCATCTGAGAGCTGGTAGAACAGAGAAGGTGCTGCAAGTTTATAACCAAATGAAGAGATTGCGTTGTGCTGCTGACTTAATTACTTATAACTTCCTCATCGAAACTCATTGCAAGGATGACAATCTTGGAGAGGCTATAAAAGTTCTCAACTCAATGGCTAAGAATGATTGCACCCCCAATGCATCGTCTTTTAACCCTATATTCAGGTGTATTGCAAAGTCGCAAGATGTAAACGGTGCACATCGGATGTTTGCTAGGATGAAGGAAGTAGGTTGTAAGCCAAATACAGTGACATACAATATCTTGATGCGAATGTTTGCCGTACCGAAATCTGCTGATATGATTTTCAAGTTGAAGAAGGAGATGGACGAGGAAGAAGTTGAGCCTAACTTTAATACATACCGAGAACTGATAGCATTATATTGTGGGATGGGGCATTGGAACCATGCTTACATGTTCTTCAGGGAAATGATTGATGAGAAATGCATAAAACCCAGCATGCCTTTGTATAAGATGGTTTTGGAAGAGCTAAGAAAGGCAGGACAGTTGAAGAAGCATGAGGAATTGGTGGATAAGATGGTTGAGAGAGGGTTCGCCTCAAGGAACCTGTAG

Coding sequence (CDS)

ATGGCTTTGATCAAATCGAAGCTTAATCTTCCTCCCTTTCTATCATCTCTCTCCCACCGTATTCAGAATCACCGTTCCTTCTCATCCTCTCCTTCAATTTCAGACCCTCCCCTTCAAGACGACCTCGCCACCGATTCACCTCAAAATGCCTCAATTCCTCTCCTCTCGCCGGAGCAAATCCAGGTTTCCGAAAAATTCCACGCTCTAATCAAGGAATACTATCGAAGAAATCCCGGTCCCGATTCAACTCCACCATGCCCTAATTTCACTATTTCCTCTCTTTCCAACGACCTGTCCCAAATCTCAGCCCCCCATTCCGTCTCTCCGGCCGTCGTTCGTTACGTCATCGAGAAATCCGGTGCCGTCCGTCATGGCATCCCTTTTCTTCCAGCCCTCGCGTTCTTCAACTGGGCGACGGCGGGAGAGGGTTTCGAGCACTCTCCACAGCCATACAACGAGATGATTGACCTAGCCGGTAAGGTAAAACAATTTGGATTAGCTTGGTATTTGATTGATTTGATGAAAGCTAGAAATGTAGAAATTACTGTTGTAACTTTCTCCATGCTTGTGCGGCGGTATGTGAGAGCTGGATTGGCGGCGGAGGCAGTTCATGCGTTTAATCGCATGGAGGACTATGGCTGTAATGCTGACATCATTGCTTTTTCCAATGTTATCAGCATTCTGTGCAAGAAGAGAAGGGCAGTTGAAGCCCAATCATTTTTTGATAATCTAAAACATAAATTCGAACCTGATGTTATTGTGTACACTAGCTTAGTTCATGGATGGTGTCGAGCAGGTGATATCTCAGAGGCTGAAAGTGTATTTAGAGAGATGAAGATGGCAGGTATTAGCCCTAATGTTTATACTTATAGCATTGTGATTGATGCCTTGTGTAGATCTGGTCAAATTACTCGTGCCCATGATGTTTTCGCTGAGATGCTCGATGCTGGTTGCAATCCAAATTCAGTTACATTTAACAATCTTATAAGAGTTCATCTGAGAGCTGGTAGAACAGAGAAGGTGCTGCAAGTTTATAACCAAATGAAGAGATTGCGTTGTGCTGCTGACTTAATTACTTATAACTTCCTCATCGAAACTCATTGCAAGGATGACAATCTTGGAGAGGCTATAAAAGTTCTCAACTCAATGGCTAAGAATGATTGCACCCCCAATGCATCGTCTTTTAACCCTATATTCAGGTGTATTGCAAAGTCGCAAGATGTAAACGGTGCACATCGGATGTTTGCTAGGATGAAGGAAGTAGGTTGTAAGCCAAATACAGTGACATACAATATCTTGATGCGAATGTTTGCCGTACCGAAATCTGCTGATATGATTTTCAAGTTGAAGAAGGAGATGGACGAGGAAGAAGTTGAGCCTAACTTTAATACATACCGAGAACTGATAGCATTATATTGTGGGATGGGGCATTGGAACCATGCTTACATGTTCTTCAGGGAAATGATTGATGAGAAATGCATAAAACCCAGCATGCCTTTGTATAAGATGGTTTTGGAAGAGCTAAGAAAGGCAGGACAGTTGAAGAAGCATGAGGAATTGGTGGATAAGATGGTTGAGAGAGGGTTCGCCTCAAGGAACCTGTAG

Protein sequence

MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQIQVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL
Homology
[Close]
BLAST of CsGy3G041180 vs. NCBI nr
Match: XP_004136485.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucumis sativus] >KGN60063.1 hypothetical protein Csa_3G874400 [Cucumis sativus])

HSP 1 Score: 613.6 bits (1581), Expect = 6.3e-172
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0 

Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI
Sbjct: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60

Query: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120
           QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG
Sbjct: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120

Query: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180
           AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE
Sbjct: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180

Query: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240
           ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF
Sbjct: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGXXXXXXXXXXXXXXXXXX 300
           FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGXXXXXXXXXXXXXXXXXX
Sbjct: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGHWNH 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGHWNH
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGHWNH 480

Query: 481 AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL
Sbjct: 481 AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 534

[Close]
BLAST of CsGy3G041180 vs. NCBI nr
Match: XP_008466457.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucumis melo])

HSP 1 Score: 518.8 bits (1335), Expect = 2.1e-143
Identity = 258/282 (91.49%), Postives = 268/282 (95.04%), Query Frame = 0 

Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MALIKSKLNLPPFLSSLSHRIQNHRSFS SPSISD PLQD+LA+DSPQN S P+LSP+QI
Sbjct: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSFSPSISDSPLQDELASDSPQNPSNPVLSPDQI 60

Query: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120
           QVSEKFHALIKEYYRRNP PDSTPP PNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG
Sbjct: 61  QVSEKFHALIKEYYRRNPSPDSTPPSPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120

Query: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180
           AVRHGIPFLPALAFFNW TAGEGF HS QPYNEMIDLAGKV+QFGLAWYLIDLMKARNVE
Sbjct: 121 AVRHGIPFLPALAFFNWVTAGEGFVHSTQPYNEMIDLAGKVRQFGLAWYLIDLMKARNVE 180

Query: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240
           ITV TFS+LVRRYVRAGLAAEAVHAFNRME+YGC AD +AFS VISILCKKRRAVEAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEEYGCTADTVAFSIVISILCKKRRAVEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAG 283
           FDNLKHKFEPDV+VYTSLVHGWCRAGDISEAE VF+EMKMAG
Sbjct: 241 FDNLKHKFEPDVVVYTSLVHGWCRAGDISEAERVFKEMKMAG 282

[Close]
BLAST of CsGy3G041180 vs. NCBI nr
Match: XP_022140589.1 (pentatricopeptide repeat-containing protein At1g20300, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 466.8 bits (1200), Expect = 9.5e-128
Identity = 235/288 (81.60%), Postives = 257/288 (89.24%), Query Frame = 0 

Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPL------QDDLATDSPQNASIPL 60
           MALI+SK NLP FLSSLSHRIQNHRSFSSSPSIS+         QD+ A+ SPQNAS PL
Sbjct: 1   MALIRSKPNLPRFLSSLSHRIQNHRSFSSSPSISEADAEVHLQNQDEDASQSPQNASKPL 60

Query: 61  LSPEQIQVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRY 120
           LSPE++Q ++KF+ALIKEYYRRNP PD TPPCPNFTIS+ SN+LS ISA HSVSPAVVR+
Sbjct: 61  LSPEEMQTADKFYALIKEYYRRNPNPDPTPPCPNFTISAFSNELSHISAVHSVSPAVVRH 120

Query: 121 VIEKSGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLM 180
           VIEKSG VRHGIPFL ALAFFNWATA EGF+HS +PYNEMIDLAGKV+QFGLAW+LIDLM
Sbjct: 121 VIEKSGGVRHGIPFLQALAFFNWATAREGFQHSAEPYNEMIDLAGKVRQFGLAWHLIDLM 180

Query: 181 KARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRA 240
           KAR VEITV TFS+LVRRYVRAGLAAEAVHAFNRMEDYGCN D IAFS V+SILCKKRRA
Sbjct: 181 KARTVEITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFSIVVSILCKKRRA 240

Query: 241 VEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAG 283
            EAQSFFD+LKHKFEPDV+VYTSLVHGWCRAG+ISEAE VF+EMKMAG
Sbjct: 241 SEAQSFFDSLKHKFEPDVVVYTSLVHGWCRAGEISEAERVFKEMKMAG 288

[Close]
BLAST of CsGy3G041180 vs. NCBI nr
Match: XP_022941057.1 (pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucurbita moschata])

HSP 1 Score: 458.8 bits (1179), Expect = 2.6e-125
Identity = 231/282 (81.91%), Postives = 250/282 (88.65%), Query Frame = 0 

Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MAL KSK NLPPFLSSLS  +QNHR FSSS SIS+  LQD+ A+++   AS P+L PE+I
Sbjct: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDASNTTPKASKPVLLPEEI 60

Query: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120
           Q ++KFH+LIKEYYRRNP PD TPP PNFTIS+LSN+LSQIS  H+VSP VVRYVIEKSG
Sbjct: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFTISALSNELSQISPVHAVSPGVVRYVIEKSG 120

Query: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180
            VRHGIPFL ALAFFNWATA E FEHS QPYNEMIDLAGKVKQFGLAW+LIDLMKARNVE
Sbjct: 121 GVRHGIPFLQALAFFNWATASETFEHSAQPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180

Query: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240
           ITV TFS+LVRRYVRAGLAAEAVHAFNRMEDYGCN D IAF+ VISILCKKRRA EAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAG 283
           FDNLKHKFEPDVIVYT+LVHGWCRAGDISEAE VF+EMKMAG
Sbjct: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAG 282

[Close]
BLAST of CsGy3G041180 vs. NCBI nr
Match: XP_023524986.1 (pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.4 bits (1160), Expect = 4.1e-123
Identity = 230/282 (81.56%), Postives = 248/282 (87.94%), Query Frame = 0 

Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MAL KSK NLPPFLSSLS  +QNHR FSSS SIS+  LQD+ A+++   AS P+L PE+I
Sbjct: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDNDASNTTPKASKPVLLPEEI 60

Query: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120
           Q ++KF +LIKEYYRRNP PD TPP PNFTIS+LSN+LSQIS    VSPAVVRYVIEKSG
Sbjct: 61  QAADKFLSLIKEYYRRNPSPDPTPPSPNFTISALSNELSQISPVQVVSPAVVRYVIEKSG 120

Query: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180
            VRHGIPFL ALAFFNWATA E FEHS QPYNEMIDLAGKVKQFGLAW+LIDLMKARNVE
Sbjct: 121 GVRHGIPFLQALAFFNWATASETFEHSAQPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180

Query: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240
           ITV TFS+LVRRYVRAGLAAEAVHAFNRMEDYGCN D IAF+ VISILCKKRRA EAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAG 283
           FDNLKHKFEPDVIVYT+LVHGWCRAGDISEAE VF+EMKMAG
Sbjct: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAG 282

[Close]
BLAST of CsGy3G041180 vs. TAIR10
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 306.6 bits (784), Expect = 3.0e-83
Identity = 167/285 (58.60%), Postives = 211/285 (74.04%), Query Frame = 0 

Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNA--SIPLLSPE 60
           MAL++SKL+L   LS +S  +    S S++  +SD    +  AT +   +    PLL+PE
Sbjct: 1   MALLRSKLHLSRTLSFISPLLPKTFSTSATSLLSDHENDESAATITAAVSVPISPLLTPE 60

Query: 61  QIQVSEKFHALIKEYYRRNP-GPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIE 120
             Q  EKFH++IK++YR+NP  P+     P+ T+ +LS D SQ          VVR VIE
Sbjct: 61  DTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQ-XXXXXXXXXVVRCVIE 120

Query: 121 KSGAVRHGIPFLPALAFFNWATAGEGFEH-SPQPYNEMIDLAGKVKQFGLAWYLIDLMKA 180
           K G+VRHGIP   +LAFFNWAT+ + ++H SP PYNEMIDL+GKV+QF LAW+LIDLMK+
Sbjct: 121 KCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKS 180

Query: 181 RNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVE 240
           RNVEI++ TF++L+RRYVRAGLA+EAVH FNRMEDYGC  D IAFS VIS L +KRRA E
Sbjct: 181 RNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASE 240

Query: 241 AQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMA 282
           AQSFFD+LK +FEPDVIVYT+LV GWCRAG+ISEAE VF+EMK+A
Sbjct: 241 AQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLA 284

[Close]
BLAST of CsGy3G041180 vs. TAIR10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 9.5e-21
Identity = 45/123 (36.59%), Postives = 77/123 (62.60%), Query Frame = 0 

Query: 134 FFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRY 193
           FF W+     +EHS + Y+ MI+   K++Q+ L W LI+ M+ + + + V TF +++R+Y
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKY 179

Query: 194 VRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDVI 253
            RA    EA++AFN ME Y    +++AF+ ++S LCK +   +AQ  F+N++ +F PD  
Sbjct: 180 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK 239

Query: 254 VYT 257
            Y+
Sbjct: 240 TYS 241

[Close]
BLAST of CsGy3G041180 vs. TAIR10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-20
Identity = 48/150 (32.00%), Postives = 81/150 (54.00%), Query Frame = 0 

Query: 134 FFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE-ITVVTFSMLVRR 193
           FF WA     + HS + Y  M+ +  K++QFG  W LI+ M+  N + I    F +LV+R
Sbjct: 133 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQR 192

Query: 194 YVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDV 253
           +  A +  +A+   + M  +G   D   F  ++  LCK     +A   F++++ +F  ++
Sbjct: 193 FASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNL 252

Query: 254 IVYTSLVHGWCRAGDISEAESVFREMKMAG 283
             +TSL++GWCR G + EA+ V  +M  AG
Sbjct: 253 RYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 282

[Close]
BLAST of CsGy3G041180 vs. TAIR10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-19
Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = 0 

Query: 131 ALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE---ITVVTFS 190
           A  FF WA +  G+ HS   YN M+D+ GK + F L W L++ M  +N E   +T+ T S
Sbjct: 149 AYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMN-KNEESKLVTLDTMS 208

Query: 191 MLVRRYVRAGLAAEAVHAFNRME-DYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKH 250
            ++RR  ++G   +AV AF  ME  YG   D IA ++++  L K+     A   F  L  
Sbjct: 209 KVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD 268

Query: 251 KFEPDVIVYTSLVHGWCRAGDISEAESVFREMKM 281
             +PD   +  L+HG+C+A    +A ++   MK+
Sbjct: 269 TIKPDARTFNILIHGFCKARKFDDARAMMDLMKV 301

[Close]
BLAST of CsGy3G041180 vs. TAIR10
Match: AT1G80550.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 86.7 bits (213), Expect = 4.9e-17
Identity = 47/157 (29.94%), Postives = 86/157 (54.78%), Query Frame = 0 

Query: 131 ALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEI-TVVTFSML 190
           AL FFNW     GF H+ + +N +ID+ GK  +F ++W LI+ M      +   VTF ++
Sbjct: 64  ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIV 123

Query: 191 VRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQS--FFDN-LKH 250
            +RYV A L  EA+ A+++++D+    D  +F N++  LC+ +  VEA+   F  N + +
Sbjct: 124 FKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKNVIGN 183

Query: 251 KFE-PDVIVYTSLVHGWCRAGDISEAESVFREMKMAG 283
            F   +  ++  ++ GW + G   + +  +++M   G
Sbjct: 184 GFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEG 219

[Close]
BLAST of CsGy3G041180 vs. Swiss-Prot
Match: sp|Q9LN22|PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.4e-82
Identity = 167/285 (58.60%), Postives = 211/285 (74.04%), Query Frame = 0 

Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNA--SIPLLSPE 60
           MAL++SKL+L   LS +S  +    S S++  +SD    +  AT +   +    PLL+PE
Sbjct: 1   MALLRSKLHLSRTLSFISPLLPKTFSTSATSLLSDHENDESAATITAAVSVPISPLLTPE 60

Query: 61  QIQVSEKFHALIKEYYRRNP-GPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIE 120
             Q  EKFH++IK++YR+NP  P+     P+ T+ +LS D SQ          VVR VIE
Sbjct: 61  DTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQ-XXXXXXXXXVVRCVIE 120

Query: 121 KSGAVRHGIPFLPALAFFNWATAGEGFEH-SPQPYNEMIDLAGKVKQFGLAWYLIDLMKA 180
           K G+VRHGIP   +LAFFNWAT+ + ++H SP PYNEMIDL+GKV+QF LAW+LIDLMK+
Sbjct: 121 KCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKS 180

Query: 181 RNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVE 240
           RNVEI++ TF++L+RRYVRAGLA+EAVH FNRMEDYGC  D IAFS VIS L +KRRA E
Sbjct: 181 RNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASE 240

Query: 241 AQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMA 282
           AQSFFD+LK +FEPDVIVYT+LV GWCRAG+ISEAE VF+EMK+A
Sbjct: 241 AQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLA 284

[Close]
BLAST of CsGy3G041180 vs. Swiss-Prot
Match: sp|Q9FVX2|PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 1.7e-19
Identity = 45/123 (36.59%), Postives = 77/123 (62.60%), Query Frame = 0 

Query: 134 FFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRY 193
           FF W+     +EHS + Y+ MI+   K++Q+ L W LI+ M+ + + + V TF +++R+Y
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKY 179

Query: 194 VRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDVI 253
            RA    EA++AFN ME Y    +++AF+ ++S LCK +   +AQ  F+N++ +F PD  
Sbjct: 180 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK 239

Query: 254 VYT 257
            Y+
Sbjct: 240 TYS 241

[Close]
BLAST of CsGy3G041180 vs. Swiss-Prot
Match: sp|Q9FH87|PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.2e-19
Identity = 48/150 (32.00%), Postives = 81/150 (54.00%), Query Frame = 0 

Query: 134 FFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE-ITVVTFSMLVRR 193
           FF WA     + HS + Y  M+ +  K++QFG  W LI+ M+  N + I    F +LV+R
Sbjct: 133 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQR 192

Query: 194 YVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDV 253
           +  A +  +A+   + M  +G   D   F  ++  LCK     +A   F++++ +F  ++
Sbjct: 193 FASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNL 252

Query: 254 IVYTSLVHGWCRAGDISEAESVFREMKMAG 283
             +TSL++GWCR G + EA+ V  +M  AG
Sbjct: 253 RYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 282

[Close]
BLAST of CsGy3G041180 vs. Swiss-Prot
Match: sp|Q9LUJ4|PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.9e-18
Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = 0 

Query: 131 ALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE---ITVVTFS 190
           A  FF WA +  G+ HS   YN M+D+ GK + F L W L++ M  +N E   +T+ T S
Sbjct: 149 AYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMN-KNEESKLVTLDTMS 208

Query: 191 MLVRRYVRAGLAAEAVHAFNRME-DYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKH 250
            ++RR  ++G   +AV AF  ME  YG   D IA ++++  L K+     A   F  L  
Sbjct: 209 KVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD 268

Query: 251 KFEPDVIVYTSLVHGWCRAGDISEAESVFREMKM 281
             +PD   +  L+HG+C+A    +A ++   MK+
Sbjct: 269 TIKPDARTFNILIHGFCKARKFDDARAMMDLMKV 301

[Close]
BLAST of CsGy3G041180 vs. Swiss-Prot
Match: sp|Q9M8M3|PP136_ARATH (Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80550 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 8.8e-16
Identity = 47/157 (29.94%), Postives = 86/157 (54.78%), Query Frame = 0 

Query: 131 ALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEI-TVVTFSML 190
           AL FFNW     GF H+ + +N +ID+ GK  +F ++W LI+ M      +   VTF ++
Sbjct: 64  ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIV 123

Query: 191 VRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQS--FFDN-LKH 250
            +RYV A L  EA+ A+++++D+    D  +F N++  LC+ +  VEA+   F  N + +
Sbjct: 124 FKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKNVIGN 183

Query: 251 KFE-PDVIVYTSLVHGWCRAGDISEAESVFREMKMAG 283
            F   +  ++  ++ GW + G   + +  +++M   G
Sbjct: 184 GFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEG 219

[Close]
BLAST of CsGy3G041180 vs. TrEMBL
Match: tr|A0A0A0LE95|A0A0A0LE95_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G874400 PE=4 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 4.2e-172
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0 

Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI
Sbjct: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60

Query: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120
           QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG
Sbjct: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120

Query: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180
           AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE
Sbjct: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180

Query: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240
           ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF
Sbjct: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGXXXXXXXXXXXXXXXXXX 300
           FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGXXXXXXXXXXXXXXXXXX
Sbjct: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGHWNH 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGHWNH
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGHWNH 480

Query: 481 AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL
Sbjct: 481 AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 534

[Close]
BLAST of CsGy3G041180 vs. TrEMBL
Match: tr|A0A1S3CRA5|A0A1S3CRA5_CUCME (pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503855 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.4e-143
Identity = 258/282 (91.49%), Postives = 268/282 (95.04%), Query Frame = 0 

Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MALIKSKLNLPPFLSSLSHRIQNHRSFS SPSISD PLQD+LA+DSPQN S P+LSP+QI
Sbjct: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSFSPSISDSPLQDELASDSPQNPSNPVLSPDQI 60

Query: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120
           QVSEKFHALIKEYYRRNP PDSTPP PNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG
Sbjct: 61  QVSEKFHALIKEYYRRNPSPDSTPPSPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120

Query: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180
           AVRHGIPFLPALAFFNW TAGEGF HS QPYNEMIDLAGKV+QFGLAWYLIDLMKARNVE
Sbjct: 121 AVRHGIPFLPALAFFNWVTAGEGFVHSTQPYNEMIDLAGKVRQFGLAWYLIDLMKARNVE 180

Query: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240
           ITV TFS+LVRRYVRAGLAAEAVHAFNRME+YGC AD +AFS VISILCKKRRAVEAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEEYGCTADTVAFSIVISILCKKRRAVEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAG 283
           FDNLKHKFEPDV+VYTSLVHGWCRAGDISEAE VF+EMKMAG
Sbjct: 241 FDNLKHKFEPDVVVYTSLVHGWCRAGDISEAERVFKEMKMAG 282

[Close]
BLAST of CsGy3G041180 vs. TrEMBL
Match: tr|A0A2P5E5R4|A0A2P5E5R4_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_233670 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 7.8e-94
Identity = 185/284 (65.14%), Postives = 221/284 (77.82%), Query Frame = 0 

Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MAL++SKL LP  +S    R     +FSS+   S   L ++   ++PQ      LSP++ 
Sbjct: 44  MALMESKLRLPCHISQPFQRQIGLYAFSSA---SGAHLLEEDINENPQTVPKTNLSPKET 103

Query: 61  QVSEKFHALIKEYYRRNPGPDS--TPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEK 120
            ++EKFH+LIK ++R+NP PDS  +PP P FTI +LS D SQISA HSVSP VV  VIEK
Sbjct: 104 LIAEKFHSLIKGHHRKNPSPDSNPSPPNPGFTIPTLSFDFSQISAVHSVSPTVVSRVIEK 163

Query: 121 SGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARN 180
              VRHGIP L ALAFFNWATA +GFE SP+PYNEM+DLAGKV+QF LAW++IDLMKARN
Sbjct: 164 CAGVRHGIPVLQALAFFNWATARDGFEQSPKPYNEMVDLAGKVRQFDLAWHIIDLMKARN 223

Query: 181 VEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQ 240
           VEIT+ TF++LVRRYVRAG AAEAVHAFNRMEDYGC  D IAFS VIS LCKKRRA EAQ
Sbjct: 224 VEITIETFAILVRRYVRAGFAAEAVHAFNRMEDYGCKPDKIAFSVVISNLCKKRRASEAQ 283

Query: 241 SFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAG 283
           SFFD+LK +FE DV++YT+L+HGWCR+G+ISEAE VFREMK AG
Sbjct: 284 SFFDSLKDRFEFDVVLYTNLIHGWCRSGNISEAERVFREMKTAG 324

[Close]
BLAST of CsGy3G041180 vs. TrEMBL
Match: tr|A5AG77|A5AG77_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033177 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 6.6e-93
Identity = 347/534 (64.98%), Postives = 385/534 (72.10%), Query Frame = 0 

Query: 1    MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
            MAL+KSK+ L     SLS   Q+  SF    S            +S  +A   +LS E+ 
Sbjct: 1033 MALVKSKVRLSLLRYSLSPVSQH--SFRLYSSSXXXXXXXXXXKESGNSAVNIVLSSEET 1092

Query: 61   QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120
             V EKFH+LIK + R+N  PD   P P++TI+SLS D SQIS+  SVS A+VR VIEK G
Sbjct: 1093 LVVEKFHSLIKSHQRKNTNPDPISPNPHYTIASLSFDFSQISSADSVSSAIVRRVIEKCG 1152

Query: 121  AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180
             VRHGIPF   LAFFNWAT  E F HSP+PY EMIDLAGKV+QF LAW LIDLMK RNVE
Sbjct: 1153 GVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVE 1212

Query: 181  ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240
            I V TF++LVRRYV+AGLAAEAVHAFNRMEDYGC  D IAFS VIS L KKRRA+EAQSF
Sbjct: 1213 IPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSF 1272

Query: 241  FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGXXXXXXXXXXXXXXXXXX 300
            FD+LK +FEPDV+VYTSLVHGWCRAG+ISEAE VF EMKMAG XXXXXXXXXXXXXXXXX
Sbjct: 1273 FDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAG-XXXXXXXXXXXXXXXXX 1332

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1333 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1392

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
            XXXXXXXXXXXXXXXXXXXXXXXXXX                                  
Sbjct: 1393 XXXXXXXXXXXXXXXXXXXXXXXXXXGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKD 1452

Query: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGHWNH 480
                                             XXXXXXXXXXXXXXXXXX   +GHWN+
Sbjct: 1453 LKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMXXXXXXXXXXXXXXXXXXFCGIGHWNN 1512

Query: 481  AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
            AY FF+EMI+EKC++PS+P+Y+MVL++LRKAGQLKKHEELV+KMV RGF +R L
Sbjct: 1513 AYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 1563

[Close]
BLAST of CsGy3G041180 vs. TrEMBL
Match: tr|A0A2P5CFQ4|A0A2P5CFQ4_PARAD (Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_157200 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.1e-92
Identity = 183/284 (64.44%), Postives = 220/284 (77.46%), Query Frame = 0 

Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           M+L++SKL LP  +S    R     +FSS+   S   L ++   ++P+      LSPE+ 
Sbjct: 44  MSLMESKLCLPCHISQPFQRQIGLYAFSSA---SGAHLLEEDTNENPRTVPKTNLSPEET 103

Query: 61  QVSEKFHALIKEYYRRNPGPDS--TPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEK 120
            +SEKFH+LIK ++R+NP PDS  +PP P FTI +LS D SQISA HSVSP VV  VIEK
Sbjct: 104 LISEKFHSLIKGHHRKNPSPDSNPSPPNPGFTIPTLSFDFSQISAVHSVSPTVVSRVIEK 163

Query: 121 SGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARN 180
              VRHGIP L ALAFFNWATA +GFE S +PYNEM+DLAGKV+QF LAW++IDLMKARN
Sbjct: 164 CAGVRHGIPVLQALAFFNWATARDGFEQSLKPYNEMVDLAGKVRQFDLAWHIIDLMKARN 223

Query: 181 VEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQ 240
           VEIT+ TF++LVRRYVRAG AAEAVHAFNRMEDYGC  D IAFS VIS LCKKRRA EAQ
Sbjct: 224 VEITIETFAILVRRYVRAGFAAEAVHAFNRMEDYGCKPDKIAFSVVISNLCKKRRASEAQ 283

Query: 241 SFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAG 283
           SFFD+LK +FE DV++YT+L+HGWCR+G+ISEAE +FREMK AG
Sbjct: 284 SFFDSLKDRFESDVVLYTNLIHGWCRSGNISEAERIFREMKTAG 324

The following BLAST results are available for this feature:
BLAST of CsGy3G041180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004136485.16.3e-172100.00PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial ... [more]
XP_008466457.12.1e-14391.49PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial ... [more]
XP_022140589.19.5e-12881.60pentatricopeptide repeat-containing protein At1g20300, mitochondrial isoform X1 ... [more]
XP_022941057.12.6e-12581.91pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucurbita ... [more]
XP_023524986.14.1e-12381.56pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucurbita ... [more]
BLAST of CsGy3G041180 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G20300.13.0e-8358.60Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G77360.19.5e-2136.59Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G65820.11.2e-2032.00Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G22670.11.0e-1934.42Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G80550.14.9e-1729.94Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsGy3G041180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LN22|PPR54_ARATH5.4e-8258.60Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidop... [more]
sp|Q9FVX2|PP129_ARATH1.7e-1936.59Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
sp|Q9FH87|PP447_ARATH2.2e-1932.00Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
sp|Q9LUJ4|PP248_ARATH1.9e-1834.42Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... [more]
sp|Q9M8M3|PP136_ARATH8.8e-1629.94Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidop... [more]
BLAST of CsGy3G041180 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LE95|A0A0A0LE95_CUCSA4.2e-172100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G874400 PE=4 SV=1[more]
tr|A0A1S3CRA5|A0A1S3CRA5_CUCME1.4e-14391.49pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Cucumis ... [more]
tr|A0A2P5E5R4|A0A2P5E5R4_9ROSA7.8e-9465.14Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=... [more]
tr|A5AG77|A5AG77_VITVI6.6e-9364.98Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033177 PE=4 SV=1[more]
tr|A0A2P5CFQ4|A0A2P5CFQ4_PARAD1.1e-9264.44Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_157200 P... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G041180.1CsGy3G041180.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 253..287
e-value: 2.6E-10
score: 37.8
coord: 323..356
e-value: 1.9E-7
score: 28.8
coord: 184..217
e-value: 2.5E-5
score: 22.2
coord: 464..493
e-value: 2.5E-4
score: 19.0
coord: 151..182
e-value: 0.0024
score: 15.9
coord: 358..392
e-value: 7.9E-7
score: 26.9
coord: 394..427
e-value: 8.8E-6
score: 23.6
coord: 288..321
e-value: 2.2E-10
score: 38.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 448..505
e-value: 4.1E-4
score: 20.3
coord: 171..228
e-value: 2.4E-4
score: 21.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 250..299
e-value: 1.6E-18
score: 66.5
coord: 320..369
e-value: 1.1E-12
score: 47.8
coord: 394..438
e-value: 1.4E-9
score: 37.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 147..181
score: 7.377
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 356..390
score: 11.137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 251..285
score: 13.778
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 461..495
score: 9.251
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..355
score: 10.698
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 217..247
score: 7.596
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 426..460
score: 9.065
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 9.843
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 391..425
score: 10.326
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 497..531
score: 8.079
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 286..320
score: 13.208
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 117..236
e-value: 1.5E-20
score: 75.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 347..533
e-value: 6.0E-36
score: 126.3
coord: 239..346
e-value: 1.2E-36
score: 128.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 217..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..54
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..533
NoneNo IPR availablePANTHERPTHR24015:SF979SUBFAMILY NOT NAMEDcoord: 1..533

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G041180Cla007423Watermelon (97103) v1cgybwmB235
CsGy3G041180Csa3G874400Cucumber (Chinese Long) v2cgybcuB110
CsGy3G041180MELO3C003729Melon (DHL92) v3.5.1cgybmeB185
CsGy3G041180ClCG05G015430Watermelon (Charleston Gray)cgybwcgB219
CsGy3G041180CSPI03G43660Wild cucumber (PI 183967)cgybcpiB111
CsGy3G041180Lsi04G017760Bottle gourd (USVL1VR-Ls)cgyblsiB176
CsGy3G041180MELO3C003729.2Melon (DHL92) v3.6.1cgybmedB186
CsGy3G041180CsaV3_3G046110Cucumber (Chinese Long) v3cgybcucB117
CsGy3G041180Cla97C05G096480Watermelon (97103) v2cgybwmbB211
CsGy3G041180Carg17216Silver-seed gourdcarcgybB0934
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G041180Cucumber (Gy14) v2cgybcgybB050
CsGy3G041180Cucurbita maxima (Rimu)cgybcmaB287
CsGy3G041180Cucurbita maxima (Rimu)cgybcmaB302
CsGy3G041180Cucurbita maxima (Rimu)cgybcmaB358
CsGy3G041180Cucurbita maxima (Rimu)cgybcmaB421
CsGy3G041180Cucurbita moschata (Rifu)cgybcmoB260
CsGy3G041180Cucurbita moschata (Rifu)cgybcmoB275
CsGy3G041180Cucurbita moschata (Rifu)cgybcmoB330
CsGy3G041180Cucurbita moschata (Rifu)cgybcmoB399
CsGy3G041180Cucurbita pepo (Zucchini)cgybcpeB298
CsGy3G041180Cucurbita pepo (Zucchini)cgybcpeB387
CsGy3G041180Cucurbita pepo (Zucchini)cgybcpeB438
CsGy3G041180Cucurbita pepo (Zucchini)cgybcpeB443
CsGy3G041180Cucumber (Chinese Long) v2cgybcuB106
CsGy3G041180Watermelon (Charleston Gray)cgybwcgB187
CsGy3G041180Wild cucumber (PI 183967)cgybcpiB106
CsGy3G041180Silver-seed gourdcarcgybB0111