CsGy3G033940 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G033940
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionProtein MOTHER of FT and TFL1
LocationChr3 : 32790374 .. 32790964 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACAGGAAAGAAGATTGTCCCATACTCGGGACCCTGACCACCTATTGGAATTCAACGCCACATCCTATTGTTGTTCAAGCAAAAGGGACCTATTGGTATGATTGATCAGCAAATAAGTCGTGCCAATTTCAACACTCGCCTCTTTGCAAAGCATTTCAATCTAGACTTGCGAGTTGCTACCTATTTCAACTCTCAAAAGTAAAAAATGACGCACAAATATTTATTTGTCAAATAATTGTATGAGCTTGCAAATGATATAAAAGTTGAAAATCAAGCTCCTCCACTTGAGTTAAGTAATGACCGTTGTGATTTGAAGTTTTTTATTCCTATTGAAACAGGTACATTGGAGATTGCCATGTACATTGCATTTGAACCCAAGAATAATCAAGGTAAAAATAAGAAGTTTGAATGTGTTATAATTCAATATATGAAAGCAGTCGAGTTAATAATATAAATGCTCTAATTAATTACAATGAATGAATTAGACAAATCAATATAACATTGACCGTCAGGTGTATAATGTAACTTATATATTTCAGGCATATTTGATAATATTTAATAAGTTATATAGTTCACCGAAACAATAA

mRNA sequence

ATGGAACAGGAAAGAAGATTGTCCCATACTCGGGACCCTGACCACCTATTGGAATTCAACGCCACATCCTATTGTTGTTCAAGCAAAAGGGACCTATTGCAAATAAGTCGTGCCAATTTCAACACTCGCCTCTTTGCAAAGCATTTCAATCTAGACTTGCGAGTTGCTACCTATTTCAACTCTCAAAATTCACCGAAACAATAA

Coding sequence (CDS)

ATGGAACAGGAAAGAAGATTGTCCCATACTCGGGACCCTGACCACCTATTGGAATTCAACGCCACATCCTATTGTTGTTCAAGCAAAAGGGACCTATTGCAAATAAGTCGTGCCAATTTCAACACTCGCCTCTTTGCAAAGCATTTCAATCTAGACTTGCGAGTTGCTACCTATTTCAACTCTCAAAATTCACCGAAACAATAA

Protein sequence

MEQERRLSHTRDPDHLLEFNATSYCCSSKRDLLQISRANFNTRLFAKHFNLDLRVATYFNSQNSPKQ
Homology
[Close]
BLAST of CsGy3G033940 vs. NCBI nr
Match: XP_004136734.1 (PREDICTED: protein MOTHER of FT and TF 1-like [Cucumis sativus] >KGN59303.1 hypothetical protein Csa_3G807330 [Cucumis sativus])

HSP 1 Score: 52.4 bits (124), Expect = 7.0e-04
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 36  SRANFNTRLFAKHFNLDLRV-ATYFNSQNSP 66
           SRANFNTRLFA+HFNLDL V ATYFNSQ  P
Sbjct: 137 SRANFNTRLFARHFNLDLPVAATYFNSQKEP 167

[Close]
BLAST of CsGy3G033940 vs. NCBI nr
Match: XP_008443056.1 (PREDICTED: protein MOTHER of FT and TFL1-like [Cucumis melo])

HSP 1 Score: 52.4 bits (124), Expect = 7.0e-04
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 36  SRANFNTRLFAKHFNLDLRV-ATYFNSQNSP 66
           SRANFNTRLFA+HFNLDL V ATYFNSQ  P
Sbjct: 137 SRANFNTRLFARHFNLDLPVAATYFNSQKEP 167

[Close]
BLAST of CsGy3G033940 vs. TAIR10
Match: AT1G18100.1 (PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 42.4 bits (98), Expect = 1.3e-04
Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0 

Query: 36  SRANFNTRLFAKHFNLDLRVAT-YFNSQNSP 66
           SRANF+TR+FA HF+L L VAT YFN+Q  P
Sbjct: 138 SRANFSTRMFAGHFDLGLPVATVYFNAQKEP 168

[Close]
BLAST of CsGy3G033940 vs. TrEMBL
Match: tr|A0A1S3B6N6|A0A1S3B6N6_CUCME (protein MOTHER of FT and TFL1-like OS=Cucumis melo OX=3656 GN=LOC103486766 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.7e-04
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 36  SRANFNTRLFAKHFNLDLRV-ATYFNSQNSP 66
           SRANFNTRLFA+HFNLDL V ATYFNSQ  P
Sbjct: 137 SRANFNTRLFARHFNLDLPVAATYFNSQKEP 167

[Close]
BLAST of CsGy3G033940 vs. TrEMBL
Match: tr|A0A0A0LBU6|A0A0A0LBU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807330 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.7e-04
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 36  SRANFNTRLFAKHFNLDLRV-ATYFNSQNSP 66
           SRANFNTRLFA+HFNLDL V ATYFNSQ  P
Sbjct: 137 SRANFNTRLFARHFNLDLPVAATYFNSQKEP 167

The following BLAST results are available for this feature:
BLAST of CsGy3G033940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004136734.17.0e-0483.87PREDICTED: protein MOTHER of FT and TF 1-like [Cucumis sativus] >KGN59303.1 hypo... [more]
XP_008443056.17.0e-0483.87PREDICTED: protein MOTHER of FT and TFL1-like [Cucumis melo][more]
BLAST of CsGy3G033940 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18100.11.3e-0467.74PEBP (phosphatidylethanolamine-binding protein) family protein[more]
BLAST of CsGy3G033940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G033940 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B6N6|A0A1S3B6N6_CUCME4.7e-0483.87protein MOTHER of FT and TFL1-like OS=Cucumis melo OX=3656 GN=LOC103486766 PE=4 ... [more]
tr|A0A0A0LBU6|A0A0A0LBU6_CUCSA4.7e-0483.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807330 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G033940.1CsGy3G033940.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G033940CsaV3_3G038840Cucumber (Chinese Long) v3cgybcucB117
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G033940Cucurbita maxima (Rimu)cgybcmaB306
CsGy3G033940Cucurbita maxima (Rimu)cgybcmaB439
CsGy3G033940Cucurbita moschata (Rifu)cgybcmoB279
CsGy3G033940Cucurbita moschata (Rifu)cgybcmoB410
CsGy3G033940Cucurbita pepo (Zucchini)cgybcpeB395
CsGy3G033940Cucumber (Chinese Long) v2cgybcuB110
CsGy3G033940Bottle gourd (USVL1VR-Ls)cgyblsiB171
CsGy3G033940Melon (DHL92) v3.5.1cgybmeB184
CsGy3G033940Melon (DHL92) v3.6.1cgybmedB185
CsGy3G033940Watermelon (Charleston Gray)cgybwcgB179
CsGy3G033940Watermelon (97103) v1cgybwmB187
CsGy3G033940Wild cucumber (PI 183967)cgybcpiB111
CsGy3G033940Silver-seed gourdcarcgybB0167
CsGy3G033940Silver-seed gourdcarcgybB0263
CsGy3G033940Watermelon (97103) v2cgybwmbB178
CsGy3G033940Wax gourdcgybwgoB213