CsGy3G032690 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCATAAACAACTTTTCTCCTGACTTCCATCAACCACCTCTTTTCTCTACTTCCCAACTTCCCATCATGCTCAACTCCAAATCCTCTCTCTCCGTCGCCCCCGCCGACCACCTTCCCATGTTCGAGAAACCCTTGACCCCCAGCGACGTTGGCAAACTCAACCGTCTCGTCATCCCCAAGCAATACGCAGAAAAATACTTTCCCCTCTCTCCCTCCGCCGCAGTCGCCACCGCCGCCGCTGCCGCTGCCGCCGGTGACTCTGCGGATAAGGGGTTGCTCCTCAGCTTTGAAGATGAGTCCGGAAAAATATGGCGGTTCCGTTACTCTTATTGGAATAGTAGTCAGAGCTATGTGCTGACCAAAGGGTGGAGCCGGTTTGTTAAAGAGAAGAGGCTCGATGCCGGTGATGTCGTCGTTTTTGAACGCCACCGCCGTGACGGTGATAGGTTGTTCATTGGGTGGAAAAAGAGGTCGGCACCGTCTCCAACGGACAGTGCGGTGGCTACGGGGAGTGGTGGGGTTGGCGGCGGTGGAGGTTGGACTAGAATGTTCTGTTCTGCAAATTCATATCCTAATTCTCATCGTCATCTTCCTTCACCGCCATACCAGTCTTCTTCCGATACTCCTCATGCAGGTTTTTTCTTCTTCTTCATTTTTTTTTTAAAAAAATTCTTATTTGAGTAAATTTATTAACATTTTTTATTTTTTTATAAAAAAAATCTAATTTTATGGTAGTCCAACAGCTCTTCTTGAACCCAAAATTAGCTTTTACTCCTTTCCCTTTCCTAAACTTCTTTTTCTCTGTTGAAATTGGAATTTGA ATGTCCATAAACAACTTTTCTCCTGACTTCCATCAACCACCTCTTTTCTCTACTTCCCAACTTCCCATCATGCTCAACTCCAAATCCTCTCTCTCCGTCGCCCCCGCCGACCACCTTCCCATGTTCGAGAAACCCTTGACCCCCAGCGACGTTGGCAAACTCAACCGTCTCGTCATCCCCAAGCAATACGCAGAAAAATACTTTCCCCTCTCTCCCTCCGCCGCAGTCGCCACCGCCGCCGCTGCCGCTGCCGCCGGTGACTCTGCGGATAAGGGGTTGCTCCTCAGCTTTGAAGATGAGTCCGGAAAAATATGGCGGTTCCGTTACTCTTATTGGAATAGTAGTCAGAGCTATGTGCTGACCAAAGGGTGGAGCCGGTTTGTTAAAGAGAAGAGGCTCGATGCCGGTGATGTCGTCGTTTTTGAACGCCACCGCCGTGACGGTGATAGGTTGTTCATTGGGTGGAAAAAGAGGTCGGCACCGTCTCCAACGGACAGTGCGGTGGCTACGGGGAGTGGTGGGGTTGGCGGCGGTGGAGGTTGGACTAGAATGTTCTGTTCTGCAAATTCATATCCTAATTCTCATCGTCATCTTCCTTCACCGCCATACCAGTCTTCTTCCGATACTCCTCATGCAGTCCAACAGCTCTTCTTGAACCCAAAATTAGCTTTTACTCCTTTCCCTTTCCTAAACTTCTTTTTCTCTGTTGAAATTGGAATTTGA ATGTCCATAAACAACTTTTCTCCTGACTTCCATCAACCACCTCTTTTCTCTACTTCCCAACTTCCCATCATGCTCAACTCCAAATCCTCTCTCTCCGTCGCCCCCGCCGACCACCTTCCCATGTTCGAGAAACCCTTGACCCCCAGCGACGTTGGCAAACTCAACCGTCTCGTCATCCCCAAGCAATACGCAGAAAAATACTTTCCCCTCTCTCCCTCCGCCGCAGTCGCCACCGCCGCCGCTGCCGCTGCCGCCGGTGACTCTGCGGATAAGGGGTTGCTCCTCAGCTTTGAAGATGAGTCCGGAAAAATATGGCGGTTCCGTTACTCTTATTGGAATAGTAGTCAGAGCTATGTGCTGACCAAAGGGTGGAGCCGGTTTGTTAAAGAGAAGAGGCTCGATGCCGGTGATGTCGTCGTTTTTGAACGCCACCGCCGTGACGGTGATAGGTTGTTCATTGGGTGGAAAAAGAGGTCGGCACCGTCTCCAACGGACAGTGCGGTGGCTACGGGGAGTGGTGGGGTTGGCGGCGGTGGAGGTTGGACTAGAATGTTCTGTTCTGCAAATTCATATCCTAATTCTCATCGTCATCTTCCTTCACCGCCATACCAGTCTTCTTCCGATACTCCTCATGCAGTCCAACAGCTCTTCTTGAACCCAAAATTAGCTTTTACTCCTTTCCCTTTCCTAAACTTCTTTTTCTCTGTTGAAATTGGAATTTGA MSINNFSPDFHQPPLFSTSQLPIMLNSKSSLSVAPADHLPMFEKPLTPSDVGKLNRLVIPKQYAEKYFPLSPSAAVATAAAAAAAGDSADKGLLLSFEDESGKIWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVVFERHRRDGDRLFIGWKKRSAPSPTDSAVATGSGGVGGGGGWTRMFCSANSYPNSHRHLPSPPYQSSSDTPHAVQQLFLNPKLAFTPFPFLNFFFSVEIGI
BLAST of CsGy3G032690 vs. NCBI nr
Match: XP_004136699.1 (PREDICTED: B3 domain-containing protein At2g36080-like [Cucumis sativus] >KGN59163.1 hypothetical protein Csa_3G778200 [Cucumis sativus]) HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of CsGy3G032690 vs. NCBI nr
Match: XP_008442877.1 (PREDICTED: B3 domain-containing protein At2g36080-like isoform X1 [Cucumis melo]) HSP 1 Score: 343.6 bits (880), Expect = 5.5e-91 Identity = 189/215 (87.91%), Postives = 192/215 (89.30%), Query Frame = 0
BLAST of CsGy3G032690 vs. NCBI nr
Match: XP_008442878.1 (PREDICTED: B3 domain-containing protein At2g36080-like isoform X2 [Cucumis melo]) HSP 1 Score: 343.6 bits (880), Expect = 5.5e-91 Identity = 189/215 (87.91%), Postives = 192/215 (89.30%), Query Frame = 0
BLAST of CsGy3G032690 vs. NCBI nr
Match: XP_022934665.1 (B3 domain-containing protein At2g36080-like [Cucurbita moschata]) HSP 1 Score: 289.7 bits (740), Expect = 9.4e-75 Identity = 162/219 (73.97%), Postives = 172/219 (78.54%), Query Frame = 0
BLAST of CsGy3G032690 vs. NCBI nr
Match: XP_022983057.1 (B3 domain-containing protein At2g36080-like [Cucurbita maxima]) HSP 1 Score: 285.0 bits (728), Expect = 2.3e-73 Identity = 159/213 (74.65%), Postives = 169/213 (79.34%), Query Frame = 0
BLAST of CsGy3G032690 vs. TAIR10
Match: AT2G36080.1 (AP2/B3-like transcriptional factor family protein) HSP 1 Score: 181.0 bits (458), Expect = 8.5e-46 Identity = 96/167 (57.49%), Postives = 110/167 (65.87%), Query Frame = 0
BLAST of CsGy3G032690 vs. TAIR10
Match: AT5G06250.2 (AP2/B3-like transcriptional factor family protein) HSP 1 Score: 177.2 bits (448), Expect = 1.2e-44 Identity = 89/133 (66.92%), Postives = 103/133 (77.44%), Query Frame = 0
BLAST of CsGy3G032690 vs. TAIR10
Match: AT3G11580.1 (AP2/B3-like transcriptional factor family protein) HSP 1 Score: 171.4 bits (433), Expect = 6.8e-43 Identity = 105/171 (61.40%), Postives = 123/171 (71.93%), Query Frame = 0
BLAST of CsGy3G032690 vs. TAIR10
Match: AT3G61970.1 (AP2/B3-like transcriptional factor family protein) HSP 1 Score: 156.8 bits (395), Expect = 1.7e-38 Identity = 74/118 (62.71%), Postives = 91/118 (77.12%), Query Frame = 0
BLAST of CsGy3G032690 vs. TAIR10
Match: AT1G68840.1 (related to ABI3/VP1 2) HSP 1 Score: 155.2 bits (391), Expect = 5.0e-38 Identity = 79/122 (64.75%), Postives = 91/122 (74.59%), Query Frame = 0
BLAST of CsGy3G032690 vs. Swiss-Prot
Match: sp|Q8GYJ2|Y2608_ARATH (B3 domain-containing protein At2g36080 OS=Arabidopsis thaliana OX=3702 GN=ARF31 PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.5e-44 Identity = 96/167 (57.49%), Postives = 110/167 (65.87%), Query Frame = 0
BLAST of CsGy3G032690 vs. Swiss-Prot
Match: sp|Q9FNI3|Y5625_ARATH (B3 domain-containing protein At5g06250 OS=Arabidopsis thaliana OX=3702 GN=At5g06250 PE=3 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.2e-43 Identity = 89/133 (66.92%), Postives = 103/133 (77.44%), Query Frame = 0
BLAST of CsGy3G032690 vs. Swiss-Prot
Match: sp|Q8RYD3|Y3158_ARATH (B3 domain-containing protein At3g11580 OS=Arabidopsis thaliana OX=3702 GN=ARF32 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.2e-41 Identity = 105/171 (61.40%), Postives = 123/171 (71.93%), Query Frame = 0
BLAST of CsGy3G032690 vs. Swiss-Prot
Match: sp|Q53QI0|Y1160_ORYSJ (B3 domain-containing protein Os11g0156000 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0156000 PE=2 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 5.1e-40 Identity = 99/184 (53.80%), Postives = 115/184 (62.50%), Query Frame = 0
BLAST of CsGy3G032690 vs. Swiss-Prot
Match: sp|Q7F9W2|Y4814_ORYSJ (B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0581400 PE=3 SV=2) HSP 1 Score: 160.6 bits (405), Expect = 2.1e-38 Identity = 81/121 (66.94%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of CsGy3G032690 vs. TrEMBL
Match: tr|A0A0A0LBH2|A0A0A0LBH2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778200 PE=4 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 7.8e-102 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of CsGy3G032690 vs. TrEMBL
Match: tr|A0A1S3B6T3|A0A1S3B6T3_CUCME (B3 domain-containing protein At2g36080-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486642 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 3.6e-91 Identity = 189/215 (87.91%), Postives = 192/215 (89.30%), Query Frame = 0
BLAST of CsGy3G032690 vs. TrEMBL
Match: tr|A0A1S3B7G9|A0A1S3B7G9_CUCME (B3 domain-containing protein At2g36080-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486642 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 3.6e-91 Identity = 189/215 (87.91%), Postives = 192/215 (89.30%), Query Frame = 0
BLAST of CsGy3G032690 vs. TrEMBL
Match: tr|A0A200Q9G4|A0A200Q9G4_9MAGN (AP2/ERF domain OS=Macleaya cordata OX=56857 GN=BVC80_1289g6 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 7.6e-49 Identity = 106/160 (66.25%), Postives = 113/160 (70.62%), Query Frame = 0
BLAST of CsGy3G032690 vs. TrEMBL
Match: tr|A0A2I4EKW4|A0A2I4EKW4_9ROSI (B3 domain-containing protein At2g36080-like OS=Juglans regia OX=51240 GN=LOC108990503 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 8.4e-48 Identity = 108/190 (56.84%), Postives = 122/190 (64.21%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |