CsGy3G031210 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACCTCCGGCGACCCCTTCTGGCATCAGTTGCTCTTTGGGCGGTGGTTCTCTGCCTTTGCCTCCATTCTCATGATGTCCATCTCCGGGGCCGCCTTCACGTTTGCCCTCTACTCCTCCGACATCAAATCTGCCTTTGGCTACGACCAAACCACCCTCAATTTGCTCAGCTTCTTCAAGGCCTTAGGCGGCAATGCCGGCATCATCTGCGGTCTCATCAATGAGGTAGCTCCGACCTGGATGATTCTTCTAATCGGCGCCGTCATGAACCTTTTTGGCTACACCATGATTTGGCTAGCCGTAACCTAA ATGGCAACCTCCGGCGACCCCTTCTGGCATCAGTTGCTCTTTGGGCGGTGGTTCTCTGCCTTTGCCTCCATTCTCATGATGTCCATCTCCGGGGCCGCCTTCACGTTTGCCCTCTACTCCTCCGACATCAAATCTGCCTTTGGCTACGACCAAACCACCCTCAATTTGCTCAGCTTCTTCAAGGCCTTAGGCGGCAATGCCGGCATCATCTGCGGTCTCATCAATGAGGTAGCTCCGACCTGGATGATTCTTCTAATCGGCGCCGTCATGAACCTTTTTGGCTACACCATGATTTGGCTAGCCGTAACCTAA ATGGCAACCTCCGGCGACCCCTTCTGGCATCAGTTGCTCTTTGGGCGGTGGTTCTCTGCCTTTGCCTCCATTCTCATGATGTCCATCTCCGGGGCCGCCTTCACGTTTGCCCTCTACTCCTCCGACATCAAATCTGCCTTTGGCTACGACCAAACCACCCTCAATTTGCTCAGCTTCTTCAAGGCCTTAGGCGGCAATGCCGGCATCATCTGCGGTCTCATCAATGAGGTAGCTCCGACCTGGATGATTCTTCTAATCGGCGCCGTCATGAACCTTTTTGGCTACACCATGATTTGGCTAGCCGTAACCTAA MATSGDPFWHQLLFGRWFSAFASILMMSISGAAFTFALYSSDIKSAFGYDQTTLNLLSFFKALGGNAGIICGLINEVAPTWMILLIGAVMNLFGYTMIWLAVT
BLAST of CsGy3G031210 vs. NCBI nr
Match: XP_008442718.1 (PREDICTED: LOW QUALITY PROTEIN: protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo]) HSP 1 Score: 184.5 bits (467), Expect = 1.8e-43 Identity = 92/103 (89.32%), Postives = 96/103 (93.20%), Query Frame = 0
BLAST of CsGy3G031210 vs. NCBI nr
Match: XP_016899643.1 (PREDICTED: uncharacterized protein LOC103487133 [Cucumis melo]) HSP 1 Score: 168.7 bits (426), Expect = 1.0e-38 Identity = 81/101 (80.20%), Postives = 91/101 (90.10%), Query Frame = 0
BLAST of CsGy3G031210 vs. NCBI nr
Match: XP_011651970.1 (PREDICTED: uncharacterized protein LOC101216551 [Cucumis sativus] >KGN58997.1 hypothetical protein Csa_3G742600 [Cucumis sativus]) HSP 1 Score: 164.5 bits (415), Expect = 2.0e-37 Identity = 79/101 (78.22%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of CsGy3G031210 vs. NCBI nr
Match: XP_016899644.1 (PREDICTED: uncharacterized protein LOC103487134 [Cucumis melo]) HSP 1 Score: 164.1 bits (414), Expect = 2.5e-37 Identity = 79/103 (76.70%), Postives = 89/103 (86.41%), Query Frame = 0
BLAST of CsGy3G031210 vs. NCBI nr
Match: XP_022947808.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucurbita moschata]) HSP 1 Score: 157.1 bits (396), Expect = 3.1e-35 Identity = 76/97 (78.35%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of CsGy3G031210 vs. TAIR10
Match: AT2G39210.1 (Major facilitator superfamily protein) HSP 1 Score: 128.3 bits (321), Expect = 2.8e-30 Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of CsGy3G031210 vs. TAIR10
Match: AT2G28120.1 (Major facilitator superfamily protein) HSP 1 Score: 116.3 bits (290), Expect = 1.1e-26 Identity = 56/89 (62.92%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of CsGy3G031210 vs. TAIR10
Match: AT1G18940.1 (Nodulin-like / Major Facilitator Superfamily protein) HSP 1 Score: 74.3 bits (181), Expect = 4.8e-14 Identity = 38/107 (35.51%), Postives = 64/107 (59.81%), Query Frame = 0
BLAST of CsGy3G031210 vs. TAIR10
Match: AT1G74780.1 (Nodulin-like / Major Facilitator Superfamily protein) HSP 1 Score: 70.1 bits (170), Expect = 9.1e-13 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 0
BLAST of CsGy3G031210 vs. TAIR10
Match: AT2G34355.1 (Major facilitator superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 1.2e-12 Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 0
BLAST of CsGy3G031210 vs. TrEMBL
Match: tr|A0A1S3B711|A0A1S3B711_CUCME (LOW QUALITY PROTEIN: protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo OX=3656 GN=LOC103486508 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.2e-43 Identity = 92/103 (89.32%), Postives = 96/103 (93.20%), Query Frame = 0
BLAST of CsGy3G031210 vs. TrEMBL
Match: tr|A0A1S4DUK0|A0A1S4DUK0_CUCME (uncharacterized protein LOC103487133 OS=Cucumis melo OX=3656 GN=LOC103487133 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 6.8e-39 Identity = 81/101 (80.20%), Postives = 91/101 (90.10%), Query Frame = 0
BLAST of CsGy3G031210 vs. TrEMBL
Match: tr|A0A0A0LEA4|A0A0A0LEA4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G742600 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.3e-37 Identity = 79/101 (78.22%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of CsGy3G031210 vs. TrEMBL
Match: tr|A0A1S4DUI8|A0A1S4DUI8_CUCME (uncharacterized protein LOC103487134 OS=Cucumis melo OX=3656 GN=LOC103487134 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.7e-37 Identity = 79/103 (76.70%), Postives = 89/103 (86.41%), Query Frame = 0
BLAST of CsGy3G031210 vs. TrEMBL
Match: tr|A0A2P6SCE9|A0A2P6SCE9_ROSCH (Putative major facilitator superfamily OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0334871 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.8e-30 Identity = 67/108 (62.04%), Postives = 84/108 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |