CsGy3G027870 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G027870
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	probable nucleoredoxin 1-1
Location	Chr3 : 28907223 .. 28907762 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAAGCAACATTTCAGCCACCCCCACCCACTGGCCGCTGCAACCCTGGTCGAAGACGACGGAACGCTCTGCTCCGCCTGCGAATTCCCACTCTCCGGCGCCGCCTTCAAGTGCTCAAAGCCCAAATGCGAATTCCATCTCCACGACCTCTGTTTCGCCCTCCCACCGGAGATCCACCACCCCTCTCACCCAAAACACCCCCTCATCCTCGCCGGATCTCCGCCCTACGTCGGTGGTGAGTTCGCCTGTGATGGCTGTGGTGACGTGGGCTCCGGCTTCATCTACCGGTGCCCACGATGCCAGTTTGATCTACACATCCACTGCGCCGCGTTGCCGGAGACGGTGGTAGGGAAAAACCACGACCATCCGCTCCGGCTTGGGTTCGAGTCAAAAGGAAAAGGATTTTGCTGCGGTGTTTGTGAGGAAGGTTTCGGAAATGGTGGTTGGGTTTATTACTGCGGGGTTTGTGATTTTGGGGTTCATGTTCACTGTTTTGTGGCTGATGATGAGGATGAAGATGAAGAAATAGTGGGGTGA

mRNA sequence

ATGTTAAAGCAACATTTCAGCCACCCCCACCCACTGGCCGCTGCAACCCTGGTCGAAGACGACGGAACGCTCTGCTCCGCCTGCGAATTCCCACTCTCCGGCGCCGCCTTCAAGTGCTCAAAGCCCAAATGCGAATTCCATCTCCACGACCTCTGTTTCGCCCTCCCACCGGAGATCCACCACCCCTCTCACCCAAAACACCCCCTCATCCTCGCCGGATCTCCGCCCTACGTCGGTGGTGAGTTCGCCTGTGATGGCTGTGGTGACGTGGGCTCCGGCTTCATCTACCGGTGCCCACGATGCCAGTTTGATCTACACATCCACTGCGCCGCGTTGCCGGAGACGGTGGTAGGGAAAAACCACGACCATCCGCTCCGGCTTGGGTTCGAGTCAAAAGGAAAAGGATTTTGCTGCGGTGTTTGTGAGGAAGGTTTCGGAAATGGTGGTTGGGTTTATTACTGCGGGGTTTGTGATTTTGGGGTTCATGTTCACTGTTTTGTGGCTGATGATGAGGATGAAGATGAAGAAATAGTGGGGTGA

Coding sequence (CDS)

ATGTTAAAGCAACATTTCAGCCACCCCCACCCACTGGCCGCTGCAACCCTGGTCGAAGACGACGGAACGCTCTGCTCCGCCTGCGAATTCCCACTCTCCGGCGCCGCCTTCAAGTGCTCAAAGCCCAAATGCGAATTCCATCTCCACGACCTCTGTTTCGCCCTCCCACCGGAGATCCACCACCCCTCTCACCCAAAACACCCCCTCATCCTCGCCGGATCTCCGCCCTACGTCGGTGGTGAGTTCGCCTGTGATGGCTGTGGTGACGTGGGCTCCGGCTTCATCTACCGGTGCCCACGATGCCAGTTTGATCTACACATCCACTGCGCCGCGTTGCCGGAGACGGTGGTAGGGAAAAACCACGACCATCCGCTCCGGCTTGGGTTCGAGTCAAAAGGAAAAGGATTTTGCTGCGGTGTTTGTGAGGAAGGTTTCGGAAATGGTGGTTGGGTTTATTACTGCGGGGTTTGTGATTTTGGGGTTCATGTTCACTGTTTTGTGGCTGATGATGAGGATGAAGATGAAGAAATAGTGGGGTGA

Protein sequence

MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIHHPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKNHDHPLRLGFESKGKGFCCGVCEEGFGNGGWVYYCGVCDFGVHVHCFVADDEDEDEEIVG

Homology

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BLAST of CsGy3G027870 vs. NCBI nr
Match: XP_004151553.1 (PREDICTED: uncharacterized protein LOC101210060 [Cucumis sativus] >KGN58631.1 hypothetical protein Csa_3G705670 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 2.7e-95
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIH 60
           MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIH
Sbjct: 1   MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIH 60

Query: 61  HPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKN 120
           HPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKN
Sbjct: 61  HPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKN 120

Query: 121 HDHPLRLGFESKGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDEDEDEEIVG 180
           HDHPLRLGFESKGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDEDEDEEIVG
Sbjct: 121 HDHPLRLGFESKGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDEDEDEEIVG 179

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BLAST of CsGy3G027870 vs. NCBI nr
Match: XP_008461757.1 (PREDICTED: probable nucleoredoxin 1-1 [Cucumis melo])

HSP 1 Score: 330.5 bits (846), Expect = 3.6e-87
Identity = 147/177 (83.05%), Postives = 153/177 (86.44%), Query Frame = 0


Query: 1   MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIH 60
           MLKQHFSHPHPLAAA +VEDDGT+CS CEFPLSGAA+KC+KPKCEFHLH LCFALPPEIH
Sbjct: 1   MLKQHFSHPHPLAAAKVVEDDGTICSGCEFPLSGAAYKCTKPKCEFHLHQLCFALPPEIH 60

Query: 61  HPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKN 120
           HPSHPKHPLIL GSPPYV GEFACDGC DVGSGFIYRCPRCQFDLHIHCAALPET+VGKN
Sbjct: 61  HPSHPKHPLILTGSPPYVDGEFACDGCDDVGSGFIYRCPRCQFDLHIHCAALPETLVGKN 120

Query: 121 HDHPLRLGFESKGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDEDEDEEI 178
           HDHPLRL FESKGKGFCCGVCEE                 VHVHCFVADDEDEDEE+
Sbjct: 121 HDHPLRLVFESKGKGFCCGVCEEGFGRGGWVYYCGVCDFGVHVHCFVADDEDEDEEM 177

[Close]

BLAST of CsGy3G027870 vs. NCBI nr
Match: XP_022983237.1 (uncharacterized protein LOC111481877 [Cucurbita maxima])

HSP 1 Score: 288.1 bits (736), Expect = 2.0e-74
Identity = 138/177 (77.97%), Postives = 146/177 (82.49%), Query Frame = 0


Query: 1   MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIH 60
           ML QHFSH HPLAAAT+ EDDG +CS CE  LSG A+KC KPKCEFHLHDLCF+LPPEIH
Sbjct: 1   MLNQHFSHRHPLAAATVAEDDGAICSGCELRLSGGAYKCIKPKCEFHLHDLCFSLPPEIH 60

Query: 61  HPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKN 120
           H SHPKHPLILAGSPPY GGEFACD CGD+GSGFIYRCPRCQFDLHIHCAALPETV+GKN
Sbjct: 61  HLSHPKHPLILAGSPPYAGGEFACDACGDLGSGFIYRCPRCQFDLHIHCAALPETVIGKN 120

Query: 121 HDHPLRLGFESKGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDEDEDEEI 178
           H HPLRL F  KGKGFCCGVCE         XXXXXXXXX     F+ +DEDEDEEI
Sbjct: 121 HGHPLRLVFHYKGKGFCCGVCEGGLGNGCWVXXXXXXXXXXXXXXFLGEDEDEDEEI 177

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BLAST of CsGy3G027870 vs. NCBI nr
Match: XP_023528190.1 (uncharacterized protein LOC111791179 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.7 bits (735), Expect = 2.7e-74
Identity = 138/177 (77.97%), Postives = 145/177 (81.92%), Query Frame = 0


Query: 1   MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIH 60
           ML QHFSH HPLAAAT+ EDDG +CS CE  LSG A+KC KPKCEFHLHDLCF+LPPEIH
Sbjct: 1   MLNQHFSHRHPLAAATVAEDDGAICSGCELRLSGDAYKCIKPKCEFHLHDLCFSLPPEIH 60

Query: 61  HPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKN 120
           HPSHPKHPLILAGSPPY GGEFACD CGD+GSGFIYRCPRCQFDLHIHCAALPETV+GKN
Sbjct: 61  HPSHPKHPLILAGSPPYAGGEFACDACGDLGSGFIYRCPRCQFDLHIHCAALPETVIGKN 120

Query: 121 HDHPLRLGFESKGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDEDEDEEI 178
           H HPLRL F  KGKGFCCGVCE         XXXXXXXXX        +DEDEDEEI
Sbjct: 121 HGHPLRLVFHYKGKGFCCGVCEGGLGNGCWVXXXXXXXXXXXXXXXXGEDEDEDEEI 177

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BLAST of CsGy3G027870 vs. NCBI nr
Match: XP_023525835.1 (uncharacterized protein LOC111789334 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.6 bits (719), Expect = 1.9e-72
Identity = 127/177 (71.75%), Postives = 135/177 (76.27%), Query Frame = 0


Query: 1   MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIH 60
           MLKQHFSH HPL A    EDDGT+CS CE  LSG A+KC+KP CEF LH+LCFALP EIH
Sbjct: 1   MLKQHFSHRHPLTATAAAEDDGTICSGCELGLSGVAYKCTKPDCEFILHELCFALPSEIH 60

Query: 61  HPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKN 120
           HPSHPKHPLIL GSPPY GGEFACDGCGD+GSGFIYRC RCQFDLHIHCAALPE + GKN
Sbjct: 61  HPSHPKHPLILTGSPPYDGGEFACDGCGDIGSGFIYRCSRCQFDLHIHCAALPEIMAGKN 120

Query: 121 HDHPLRLGFESKGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDEDEDEEI 178
           H HPLRL F SKGKGF CGVCE                  VHV CFVA+DE E+EEI
Sbjct: 121 HGHPLRLEFRSKGKGFRCGVCEGGFGNGCWVYYCGDCDFGVHVDCFVAEDEGEEEEI 177

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BLAST of CsGy3G027870 vs. TAIR10
Match: AT2G44380.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 161.8 bits (408), Expect = 4.0e-40
Identity = 77/179 (43.02%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 4   QHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIHHPS 63
           +H SH HPL      ++D  +CS CE  L+G AFKC K  C++ LH  CF LP E +H S
Sbjct: 13  RHASHNHPLRVFKARDEDEVVCSGCELELTGQAFKCMKSDCDYFLHKSCFDLPRETNHKS 72

Query: 64  HPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKNHDH 123
           HP H L L  SPPY G  + CD CG+ GSGF Y C  CQ+D+H+ CA +PETV  ++H+H
Sbjct: 73  HPNHSLTLLHSPPY-GQSYTCDACGEYGSGFTYNCSECQYDVHVGCAFIPETVEREDHEH 132

Query: 124 PLRLGFESKGKG------FCCGVCEEXXXXXXXXXXXXXXXXXVHVH-CFVADDEDEDE 176
           PL L + +  KG      F C VCEE                  HVH C V +D + ++
Sbjct: 133 PLTLLYNTPCKGREDGAKFICDVCEEKMSENLWVYYCKECDYGTHVHSCAVYEDHESEK 190

[Close]

BLAST of CsGy3G027870 vs. TAIR10
Match: AT2G17740.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 152.1 bits (383), Expect = 3.2e-37
Identity = 71/171 (41.52%), Postives = 94/171 (54.97%), Query Frame = 0


Query: 4   QHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIHHPS 63
           +H SH HPL       +D  +CS C+  L GA FKC+K +C++ LH  CF LP EI H S
Sbjct: 8   RHPSHNHPLRGHKAQVEDEIICSGCDLDLLGAYFKCTKSECDYFLHKSCFDLPREIRHKS 67

Query: 64  HPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKNHDH 123
           HP HPLIL  SP      + CD CG+ GSGF Y C  CQ+D+H+ C ++PET+    H H
Sbjct: 68  HPDHPLILLYSPQNNNSTYTCDACGEYGSGFTYNCSICQYDVHVGCVSVPETMKHDEHVH 127

Query: 124 PLRLGFES---KGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDE 172
           PL L +++   K   F C VC+E                  H+H  VA++E
Sbjct: 128 PLALIYKAPCPKDHIFTCDVCDETMPHNLWLYYCQKCDYGAHLHSCVAEEE 178

[Close]

BLAST of CsGy3G027870 vs. TAIR10
Match: AT2G28270.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-36
Identity = 70/175 (40.00%), Postives = 93/175 (53.14%), Query Frame = 0


Query: 4   QHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIHHPS 63
           +H SH HPL      E+D  +CS CE  L G AFKC+K +C++ LH  CF LP EIHH S
Sbjct: 12  RHPSHNHPLRVFNSKEEDEIICSGCEHDLIGQAFKCTKSECDYFLHKSCFDLPGEIHHKS 71

Query: 64  HPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKNHDH 123
           H  HPL L  SPP     + CD CG+ GS F Y C  C++ +H+ CA +PE V  ++H+H
Sbjct: 72  HTNHPLTLLHSPPNGLSTYTCDACGEYGSAFTYHCSECKYHVHVGCAFVPENVKREDHEH 131

Query: 124 PLRLGFESKGKG------FCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDED 173
           PL L + +  KG      F C VCE                   HVH    ++++
Sbjct: 132 PLTLLYNTPCKGRKDGVVFICDVCEVDVSENLWVYYCKECDYGTHVHSCTTNEDN 186

[Close]

BLAST of CsGy3G027870 vs. TAIR10
Match: AT5G43520.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 144.4 bits (363), Expect = 6.6e-35
Identity = 70/174 (40.23%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 4   QHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIHHPS 63
           +H SH HPL      E+D T CS CE  L+G AFKC K +C++ LH  CF LP E ++ S
Sbjct: 17  RHPSHNHPLRVFKAKEEDETACSGCELELTGQAFKCIKSECDYFLHKSCFDLPSETNNKS 76

Query: 64  HPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKNHDH 123
           H  HPL L  SPP     + CD C   GSGF Y C  C + LH+ CA +PETV  ++H+H
Sbjct: 77  HQDHPLTLLHSPPDDRSVYTCDACDQYGSGFSYHCSNCNYSLHVGCAFIPETVDREDHEH 136

Query: 124 PLRLGFESKGKG-----FCCGVCEEXXXXXXXXXXXXXXXXXVHVH-CFVADDE 172
           PL L + +  KG     F C  C+E                  H+H C   +D+
Sbjct: 137 PLTLLYCTPCKGREDTYFTCSACDETISEDLWMYYCKDCDYGTHLHSCAAYEDQ 190

[Close]

BLAST of CsGy3G027870 vs. TAIR10
Match: AT2G44370.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 139.0 bits (349), Expect = 2.8e-33
Identity = 61/127 (48.03%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 20  DDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIHHPSHPKHPLILAGSPPYVG 79
           ++  +CS C+  L GAAFKC+K +C++ LH  CF LP E  H +HP HPLIL  SPPY  
Sbjct: 25  EEEIICSGCDLDLIGAAFKCTKSECDYFLHKSCFELPRETRHKAHPDHPLILLYSPPY-E 84

Query: 80  GEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKNHDHPLRLGFES---KGKGF 139
             + CD CG+ GSGF Y C  CQ+D+H+ C ++PE+V  + H HPL L + S    G  F
Sbjct: 85  STYTCDACGEYGSGFTYNCSICQYDVHVGCVSMPESVEREGHAHPLTLLYRSPYQNGLIF 144

Query: 140 CCGVCEE 144
            C VC+E
Sbjct: 145 NCDVCQE 150

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BLAST of CsGy3G027870 vs. Swiss-Prot
Match: sp|Q7Y0E8|NRX11_ORYSJ (Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405500 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.7e-06
Identity = 24/66 (36.36%), Postives = 34/66 (51.52%), Query Frame = 0


Query: 45  EFHLHDLCFALPPEIHHPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFD 104
           E  + ++    P ++ H  H +H L+L     Y      CDGC ++GS + YRC  C FD
Sbjct: 480 ERKIDEMAKGWPGKLKHELHDEHELVLTRCTTY-----GCDGCDEMGSSWSYRCRECDFD 539

Query: 105 LHIHCA 111
           LH  CA
Sbjct: 540 LHPKCA 540

[Close]

BLAST of CsGy3G027870 vs. Swiss-Prot
Match: sp|Q7Y0F2|NRX12_ORYSJ (Probable nucleoredoxin 1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405900 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-05
Identity = 26/81 (32.10%), Postives = 39/81 (48.15%), Query Frame = 0


Query: 30  FPLSGAAFKCSKPKCEFHLHDLCFALPPEIHHPSHPKHPLILAGSPPYVGGEFACDGCGD 89
           FP +    +  + + E  ++D+    P ++ H  H  H L+L     Y      CDGC +
Sbjct: 476 FPFTEEKLQELEKEKEKKINDMAKGWPEKLKHDLH-DHELVLTRCTTY-----GCDGCDE 535

Query: 90  VGSGFIYRCPRCQFDLHIHCA 111
           +G  + YRC  C FDLH  CA
Sbjct: 536 MGDSWSYRCKECDFDLHPKCA 550

[Close]

BLAST of CsGy3G027870 vs. Swiss-Prot
Match: sp|O80763|NRX1_ARATH (Probable nucleoredoxin 1 OS=Arabidopsis thaliana OX=3702 GN=At1g60420 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.0e-05
Identity = 26/83 (31.33%), Postives = 39/83 (46.99%), Query Frame = 0


Query: 56  PPEIHHPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPET 115
           P ++ H  H +H L L     Y      CD C + G+ + Y C  C FDLH  CA   +T
Sbjct: 495 PKKVKHVLHEEHELELTRVQVY-----TCDKCEEEGTIWSYHCDECDFDLHAKCALNEDT 554

Query: 116 VVGKNHDHPLRLGFESKGKGFCC 139
              +N D  +++G +    G+ C
Sbjct: 555 --KENGDEAVKVGGDESKDGWVC 570

[Close]

BLAST of CsGy3G027870 vs. TrEMBL
Match: tr|A0A0A0LEY9|A0A0A0LEY9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G705670 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.8e-95
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIH 60
           MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIH
Sbjct: 1   MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIH 60

Query: 61  HPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKN 120
           HPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKN
Sbjct: 61  HPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKN 120

Query: 121 HDHPLRLGFESKGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDEDEDEEIVG 180
           HDHPLRLGFESKGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDEDEDEEIVG
Sbjct: 121 HDHPLRLGFESKGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDEDEDEEIVG 179

[Close]

BLAST of CsGy3G027870 vs. TrEMBL
Match: tr|A0A1S3CGR7|A0A1S3CGR7_CUCME (probable nucleoredoxin 1-1 OS=Cucumis melo OX=3656 GN=LOC103500285 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.4e-87
Identity = 147/177 (83.05%), Postives = 153/177 (86.44%), Query Frame = 0


Query: 1   MLKQHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIH 60
           MLKQHFSHPHPLAAA +VEDDGT+CS CEFPLSGAA+KC+KPKCEFHLH LCFALPPEIH
Sbjct: 1   MLKQHFSHPHPLAAAKVVEDDGTICSGCEFPLSGAAYKCTKPKCEFHLHQLCFALPPEIH 60

Query: 61  HPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKN 120
           HPSHPKHPLIL GSPPYV GEFACDGC DVGSGFIYRCPRCQFDLHIHCAALPET+VGKN
Sbjct: 61  HPSHPKHPLILTGSPPYVDGEFACDGCDDVGSGFIYRCPRCQFDLHIHCAALPETLVGKN 120

Query: 121 HDHPLRLGFESKGKGFCCGVCEEXXXXXXXXXXXXXXXXXVHVHCFVADDEDEDEEI 178
           HDHPLRL FESKGKGFCCGVCEE                 VHVHCFVADDEDEDEE+
Sbjct: 121 HDHPLRLVFESKGKGFCCGVCEEGFGRGGWVYYCGVCDFGVHVHCFVADDEDEDEEM 177

[Close]

BLAST of CsGy3G027870 vs. TrEMBL
Match: tr|O64872|O64872_ARATH (At2g44380 OS=Arabidopsis thaliana OX=3702 GN=At2g44380 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36
Identity = 77/179 (43.02%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 4   QHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIHHPS 63
           +H SH HPL      ++D  +CS CE  L+G AFKC K  C++ LH  CF LP E +H S
Sbjct: 13  RHASHNHPLRVFKARDEDEVVCSGCELELTGQAFKCMKSDCDYFLHKSCFDLPRETNHKS 72

Query: 64  HPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKNHDH 123
           HP H L L  SPPY G  + CD CG+ GSGF Y C  CQ+D+H+ CA +PETV  ++H+H
Sbjct: 73  HPNHSLTLLHSPPY-GQSYTCDACGEYGSGFTYNCSECQYDVHVGCAFIPETVEREDHEH 132

Query: 124 PLRLGFESKGKG------FCCGVCEEXXXXXXXXXXXXXXXXXVHVH-CFVADDEDEDE 176
           PL L + +  KG      F C VCEE                  HVH C V +D + ++
Sbjct: 133 PLTLLYNTPCKGREDGAKFICDVCEEKMSENLWVYYCKECDYGTHVHSCAVYEDHESEK 190

[Close]

BLAST of CsGy3G027870 vs. TrEMBL
Match: tr|A0A178VWA0|A0A178VWA0_ARATH (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At2g41940 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36
Identity = 77/179 (43.02%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 4   QHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIHHPS 63
           +H SH HPL      ++D  +CS CE  L+G AFKC K  C++ LH  CF LP E +H S
Sbjct: 13  RHASHNHPLRVFKARDEDEVVCSGCELELTGQAFKCMKSDCDYFLHKSCFDLPRETNHKS 72

Query: 64  HPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKNHDH 123
           HP H L L  SPPY G  + CD CG+ GSGF Y C  CQ+D+H+ CA +PETV  ++H+H
Sbjct: 73  HPNHSLTLLHSPPY-GQSYTCDACGEYGSGFTYNCSECQYDVHVGCAFIPETVEREDHEH 132

Query: 124 PLRLGFESKGKG------FCCGVCEEXXXXXXXXXXXXXXXXXVHVH-CFVADDEDEDE 176
           PL L + +  KG      F C VCEE                  HVH C V +D + ++
Sbjct: 133 PLTLLYNTPCKGREDGAKFICDVCEEKMSENLWVYYCKECDYGTHVHSCAVYEDHESEK 190

[Close]

BLAST of CsGy3G027870 vs. TrEMBL
Match: tr|M4F990|M4F990_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.2e-36
Identity = 79/174 (45.40%), Postives = 95/174 (54.60%), Query Frame = 0


Query: 4   QHFSHPHPLAAATLVEDDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIHHPS 63
           +H SH HPL      E+D  +CS CE  L G AFKC+K  C++ LH  CF LP E  H S
Sbjct: 13  RHPSHNHPLRLFKSQEEDEIICSGCELNLIGQAFKCTKKDCDYFLHKSCFDLPRETKHKS 72

Query: 64  HPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKNHDH 123
           H  HPL L  SPPY G  + CD CG  GSGF Y C  CQ+D+H+ CA +PETV  ++HDH
Sbjct: 73  HSDHPLTLLHSPPY-GHSYTCDACGQYGSGFTYNCSECQYDVHVGCAFIPETVKREDHDH 132

Query: 124 PLRLGFESKGKG------FCCGVCEEXXXXXXXXXXXXXXXXXVHVH-CFVADD 171
           PL L + +  KG      F C VCEE                  HVH C V +D
Sbjct: 133 PLTLVYNTPCKGREDGAMFICDVCEEDMSENLWVYYCKECDYGTHVHSCAVYED 185

The following BLAST results are available for this feature:

BLAST of CsGy3G027870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151553.1	2.7e-95	100.00	PREDICTED: uncharacterized protein LOC101210060 [Cucumis sativus] >KGN58631.1 hy...	[more]
XP_008461757.1	3.6e-87	83.05	PREDICTED: probable nucleoredoxin 1-1 [Cucumis melo]	[more]
XP_022983237.1	2.0e-74	77.97	uncharacterized protein LOC111481877 [Cucurbita maxima]	[more]
XP_023528190.1	2.7e-74	77.97	uncharacterized protein LOC111791179 [Cucurbita pepo subsp. pepo]	[more]
XP_023525835.1	1.9e-72	71.75	uncharacterized protein LOC111789334 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G027870 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44380.1	4.0e-40	43.02	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G17740.1	3.2e-37	41.52	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G28270.1	1.2e-36	40.00	Cysteine/Histidine-rich C1 domain family protein	[more]
AT5G43520.1	6.6e-35	40.23	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G44370.1	2.8e-33	48.03	Cysteine/Histidine-rich C1 domain family protein	[more]

BLAST of CsGy3G027870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7Y0E8\|NRX11_ORYSJ	4.7e-06	36.36	Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405...	[more]
sp\|Q7Y0F2\|NRX12_ORYSJ	1.8e-05	32.10	Probable nucleoredoxin 1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405...	[more]
sp\|O80763\|NRX1_ARATH	4.0e-05	31.33	Probable nucleoredoxin 1 OS=Arabidopsis thaliana OX=3702 GN=At1g60420 PE=1 SV=1	[more]

BLAST of CsGy3G027870 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LEY9\|A0A0A0LEY9_CUCSA	1.8e-95	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G705670 PE=4 SV=1	[more]
tr\|A0A1S3CGR7\|A0A1S3CGR7_CUCME	2.4e-87	83.05	probable nucleoredoxin 1-1 OS=Cucumis melo OX=3656 GN=LOC103500285 PE=4 SV=1	[more]
tr\|O64872\|O64872_ARATH	1.5e-36	43.02	At2g44380 OS=Arabidopsis thaliana OX=3702 GN=At2g44380 PE=2 SV=1	[more]
tr\|A0A178VWA0\|A0A178VWA0_ARATH	1.5e-36	43.02	Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At2g41940 PE=4 ...	[more]
tr\|M4F990\|M4F990_BRARP	4.2e-36	45.40	Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004146	DC1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G027870.1	CsGy3G027870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004146	DC1	PFAM	PF03107	C1_2	coord: 62..110 e-value: 2.3E-13 score: 50.1 coord: 6..52 e-value: 3.3E-7 score: 30.4 coord: 120..165 e-value: 1.3E-8 score: 34.9
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 3..173
None	No IPR available	PANTHER	PTHR13871:SF60	CYSTEINE/HISTIDINE-RICH C1 DOMAIN-CONTAINING PROTEIN-RELATED	coord: 3..173
None	No IPR available	SUPERFAMILY	SSF57889	Cysteine-rich domain	coord: 109..167
None	No IPR available	SUPERFAMILY	SSF57889	Cysteine-rich domain	coord: 34..117

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G027870	Cla017235	Watermelon (97103) v1	cgybwmB182
CsGy3G027870	Csa3G705670	Cucumber (Chinese Long) v2	cgybcuB111
CsGy3G027870	MELO3C023932	Melon (DHL92) v3.5.1	cgybmeB172
CsGy3G027870	ClCG10G012690	Watermelon (Charleston Gray)	cgybwcgB175
CsGy3G027870	CSPI03G30050	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G027870	CmaCh14G010330	Cucurbita maxima (Rimu)	cgybcmaB307
CsGy3G027870	CmoCh14G010510	Cucurbita moschata (Rifu)	cgybcmoB280
CsGy3G027870	Cp4.1LG03g09120	Cucurbita pepo (Zucchini)	cgybcpeB396
CsGy3G027870	Cp4.1LG02g15540	Cucurbita pepo (Zucchini)	cgybcpeB378
CsGy3G027870	MELO3C023932.2	Melon (DHL92) v3.6.1	cgybmedB173
CsGy3G027870	CsaV3_3G032540	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G027870	Cla97C10G195560	Watermelon (97103) v2	cgybwmbB175
CsGy3G027870	Bhi11G001221	Wax gourd	cgybwgoB212
CsGy3G027870	Carg11248	Silver-seed gourd	carcgybB0802
CsGy3G027870	Carg07304	Silver-seed gourd	carcgybB0756

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G027870	Cucumber (Chinese Long) v3	cgybcucB154
CsGy3G027870	Cucumber (Gy14) v2	cgybcgybB113
CsGy3G027870	Cucurbita maxima (Rimu)	cgybcmaB366
CsGy3G027870	Cucurbita maxima (Rimu)	cgybcmaB456
CsGy3G027870	Cucurbita moschata (Rifu)	cgybcmoB320
CsGy3G027870	Cucurbita moschata (Rifu)	cgybcmoB337
CsGy3G027870	Cucurbita moschata (Rifu)	cgybcmoB422
CsGy3G027870	Cucurbita pepo (Zucchini)	cgybcpeB308
CsGy3G027870	Cucurbita pepo (Zucchini)	cgybcpeB356
CsGy3G027870	Bottle gourd (USVL1VR-Ls)	cgyblsiB156
CsGy3G027870	Bottle gourd (USVL1VR-Ls)	cgyblsiB168
CsGy3G027870	Melon (DHL92) v3.5.1	cgybmeB157
CsGy3G027870	Melon (DHL92) v3.6.1	cgybmedB157
CsGy3G027870	Silver-seed gourd	carcgybB0365
CsGy3G027870	Silver-seed gourd	carcgybB0460