CsGy3G027820 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G027820
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 28876051 .. 28879649 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGTTTCCATTCACCAATAGGAAGAGGGTATTTGGTATATACTCAACGACGTCGTATGATTCTTTCGATACGTCGGCCATTCCGTAATTTTTATCTCGTAATCCTCATAATTGATAAAGGGTCAATCCCCACTATCCTCCTCTCTCCGCCACCGCTTCCTTTCCGATTCCGGCCACCGCTTCTACCTTCTTTACTTCATCCATTTCTTCCTCCTCCGTTCGTCTGGAACTACAGTCTCCAGAATCGACTTGCTTATTTCTGTTCTGTTCCAGTCTCCTGATGGGTGAACTGCGACTTTAGATTGCCCTAATCTTCGTCTGATTGCAGGTTTTTTTCTATTTTGGGTTTGAATTTCTTCCTGGTGGTTTTTAATATTGTTTTTTTATTTATTGTGTTTGGGATCTTTTCTTGGGTCGTTGCTCTAGGTTTCTTCGAAAATTTTAGGTTCTGATTTTCACGGTAGAATTTGGATTTCGTGAAATTTTGGAGAGTTTCTTTTATAGTTTGTGGATAATTAAAGCTAAATTGTCTAACAATGGATAAAATTGAAGCGTGGGGATTAGTTAGGGTATATGGAATTTTTTAGGTTTTCTGTAGTGAAAGAAGTGAACTTCTTCTTTGTTGTTGTTGTTCATTGGCAGGAGGAGTGATGCTTCGATGGGTTTTTTGAATTTGAGATTTGTTTTTAGTTGTGAGGTTAGAATGAAAGGGAGGATTCGGTGTAGATGCTAATGGGAAATAACTCAAGAGAAGATATAATGGACCTGGATTTGAATCAAGAGCCTTTGGACCAATCATATGATTCAGTGTTAGGGTTAGACACTATACTGAATGACCTTGAAACTGCTCATGGACGCATTGAAGAACGCATTCGACAACTTGAAGCCGTTACGACGAGGGCTACACGGCGACAGAGATGGCGACATGCTCCGACTGTTACTGAACCTGCTGAAACTCCAGCAGCTTATGCTCACCTTGAAAGACATGAGACTGTTGATGATAGTGCTGCTGCTCAACAAAGAATACTTCATTCAGAGAAAACTAGTAAAAAGAATGGGCCTCATCTGGTTGCCAAAGCATTGGGGATGGATTCAGAGCCAAAGGCCACTGGAAACAAGATGGGAAGTCTTTTCGATTGTAATATATGCTTGGATGTCGCCAAGGATCCAATATTGACATGTTGTGGTCACTTATTTTGTTGGTCTTGCTTTTATCAGTTATCTTATGTTCATTCAAATGCTAAGGAATGCCCTGAATGTCAAGGTGAAGTAACAGACACAAGCATCATTCCAATCTATGGCCATGGGAATGGTAATCGTGCCCAAAAGTCAAAGCCTAATGATTCTGGTTTGAAGGTTCCTCCCAGGCCACGTGCGCAAAGGATTGAGAGTATGAGGCAGCAAATTTTATTCCGAGGGACATCGTCTTCTATCATTGAAGAAAGGATTCAGCAGATTAGTAACATGATCGGTGCAATGGGGGAGCAATCTCGGTCGCAGAATTTTGATGTTACACATGGAAGGATTGAGAGGACTAATTTGTTGGGCCGGAGGCGTCGTGCCACCCAATATGCCTCCCAAGCATTACCTGTTCCTGAGAACGAGAACAGTCAGCAAAATCGATCCCTTCAAGTTTCTAGATTGCTGCTGCAAGGTGCTGCCTCATTTTCATCTCTCTCATCTGCTTTGAATTCTGCAATGGACTCTGCTGAAAGATTAGTTGAGGACCTTGAGACATACATTCACAATCATAGTGCAGGTAGAAGCCGCCCACACTCTCTTCCTAACAATCTTAACAATGGAGATTCCTTGTCCGGTATCGTTCCAACTGTGCAATCGGATGGTATTGCCCCAGATCCTGTTGGTGGAATCACCTTTCTGGTTCCCCAGTTTGAGTCATCTTCTAGAAGTATGGATATCGCTACAAATATTGAACGTCTAGAAAACCAGACCAGTAATGCTACTGAATTTGATCGAATAATACTCCCATCTCCATCAACCAGAAGGAGGAGTGAGTTACCACGACGGTCAGATGTGGACAACCAAATTTTACAGGAGCGAAGGAGGAGGAGACTGGGATAATTGTATTGATAATGAAGTTCTCATTGTATGCAATATTTATTTACTTCATCACTTTTCTCTTTTTAAGTTATTGAATGATCTTCAACATTGGGGTGATTCTTGCTGGTGTAAATCTCATATAAATAACAGCTCTAAGAAGTTTGATGGTCGATTTTCTGATAAGGTATCGAAGGAGCGATCTTGTTAGCTTTCCAGCTGCAACACACTTCTACAACGTCGCTAGCTGGTTGCTGCAAAAGCACGTGCTGAATTTTTTCCTTCATGGAAGATGCATACTTGATATTGGTAATGCTTCGTCGTCAAATAGCTGTTGATGTAATGGTAAGCTCCTGTAATATATACACACCATGTGCAAGTCCCTCCCCCTGCCCCTCCCCCCAATGAATCAGGCATCCAAAATTTCCTATGGTCTAGATAGATAGATTGTACTGGTGTTGGAAATTACTGAAATCAATATGTAGCTTTTCTTCTGAAATTCTTTCATTGAAGAGAAGAGTTGTGTTTTGAGGAAAAACCTTTGCATTTGCATCTTCCTTGTCGGTTCCTACGAGACTATCATATTAATTTTTGCTTTTATCCTAACCTACTAATGGTTGGGCACCTCTTCATTTGTTACTTCTCTTGAACAATAGGACTAATCAAATCATGTCTACATAGGATTTGGTAATTTCTGCCCTTTGATAATGTTTCTTCAAGAAGTTTCTCCTTTCACATAAGTGTCGCTTATATGCTTACAGGGTGTCAGTCTTGTAGCAATTACTTGAAAGAGAGGGAGAGCAGGAAGGAGGGGAGGTGAAAGTTGAAATTTCTTTCATTTATTTTGTGGATAGATACTTTCACATGTAACTTTACAAAGTTTGTATTGGATCATCTGAAGAATTAACCTTCCTTTTAGTTCTTAGTTAACATCGTTAATTAAATGTTAATGTTTCATGTTTGATTCGTCCTGTCAGTGATGTTAGGTGCATTGTAGTACTGTAGTAATGTAGTTATGGATATTGACTAAAGTTAGAACTTAGAAGTGGAATTGTTTAAATTTAACCATATTCTATAAATATCTAAATTTAGTCATGTATTAAATAGAAGTATAGTTTGTAAGGACAGGTTTTAAAGCTTGTTCGATGGTGTTGTTTCAGTTTCCCGATTCGATTTTTGGCATAGCATCAACCTAAAAAGTTGGAAACGGAAGAGAAGCAATCACTGAGTTTCCCTTCTTTAAACATCTCAATATGCAGTCTTCTAAGTAACACGAGATTAAAAAGGTCAAGAGCACAATTGATGGTGAACATCAATTTGGAAAATTAATTTTCTACAAGCTTTCTTCACATCTAAATATAAATATTGTAAGATAAAGACTATCTCAAGATTAATTGAGGTACGTTTCACATCTAAATATTATAGGATAAGATTAGTTGAGGTACGTGTAAGCGGATTTAGTTGAGGTACGATTCACATCTAAATATTATAGGATAAATATTATAGAATGAAGGCTATGTTAAGATTAGTTGAGGTACG

mRNA sequence

ATGTGGTTTCCATTCACCAATAGGAAGAGGGGTCAATCCCCACTATCCTCCTCTCTCCGCCACCGCTTCCTTTCCGATTCCGGCCACCGCTTCTACCTTCTTTACTTCATCCATTTCTTCCTCCTCCGTTCGTCTGGAACTACAGTCTCCAGAATCGACTTGCTTATTTCTGTTCTGTTCCAGTCTCCTGATGGGAGGAGTGATGCTTCGATGGGTTTTTTGAATTTGAGATTTGTTTTTAGTTGTGAGGTTAGAATGAAAGGGAGGATTCGGTGTAGATGCTAATGGGAAATAACTCAAGAGAAGATATAATGGACCTGGATTTGAATCAAGAGCCTTTGGACCAATCATATGATTCAGTGTTAGGGTTAGACACTATACTGAATGACCTTGAAACTGCTCATGGACGCATTGAAGAACGCATTCGACAACTTGAAGCCGTTACGACGAGGGCTACACGGCGACAGAGATGGCGACATGCTCCGACTGTTACTGAACCTGCTGAAACTCCAGCAGCTTATGCTCACCTTGAAAGACATGAGACTGTTGATGATAGTGCTGCTGCTCAACAAAGAATACTTCATTCAGAGAAAACTAGTAAAAAGAATGGGCCTCATCTGGTTGCCAAAGCATTGGGGATGGATTCAGAGCCAAAGGCCACTGGAAACAAGATGGGAAGTCTTTTCGATTGTAATATATGCTTGGATGTCGCCAAGGATCCAATATTGACATGTTGTGGTCACTTATTTTGTTGGTCTTGCTTTTATCAGTTATCTTATGTTCATTCAAATGCTAAGGAATGCCCTGAATGTCAAGGTGAAGTAACAGACACAAGCATCATTCCAATCTATGGCCATGGGAATGGTAATCGTGCCCAAAAGTCAAAGCCTAATGATTCTGGTTTGAAGGTTCCTCCCAGGCCACGTGCGCAAAGGATTGAGAGTATGAGGCAGCAAATTTTATTCCGAGGGACATCGTCTTCTATCATTGAAGAAAGGATTCAGCAGATTAGTAACATGATCGGTGCAATGGGGGAGCAATCTCGGTCGCAGAATTTTGATGTTACACATGGAAGGATTGAGAGGACTAATTTGTTGGGCCGGAGGCGTCGTGCCACCCAATATGCCTCCCAAGCATTACCTGTTCCTGAGAACGAGAACAGTCAGCAAAATCGATCCCTTCAAGTTTCTAGATTGCTGCTGCAAGGTGCTGCCTCATTTTCATCTCTCTCATCTGCTTTGAATTCTGCAATGGACTCTGCTGAAAGATTAGTTGAGGACCTTGAGACATACATTCACAATCATAGTGCAGGTAGAAGCCGCCCACACTCTCTTCCTAACAATCTTAACAATGGAGATTCCTTGTCCGGTATCGTTCCAACTGTGCAATCGGATGGTATTGCCCCAGATCCTGTTGGTGGAATCACCTTTCTGGTTCCCCAGTTTGAGTCATCTTCTAGAAGTATGGATATCGCTACAAATATTGAACGTCTAGAAAACCAGACCAGTAATGCTACTGAATTTGATCGAATAATACTCCCATCTCCATCAACCAGAAGGAGGAGTGAGTTACCACGACGGTCAGATGTGGACAACCAAATTTTACAGGAGCGAAGGAGGAGGAGACTGGGATAATTGTATTGATAATGAAGTTCTCATTGTATCGAAGGAGCGATCTTGTTAGCTTTCCAGCTGCAACACACTTCTACAACGTCGCTAGCTGGTTGCTGCAAAAGCACGTGCTGAATTTTTTCCTTCATGGAAGATGCATACTTGATATTGGTAATGCTTCGTCGTCAAATAGCTGTTGATGTAATGGGTGTCAGTCTTGTAGCAATTACTTGAAAGAGAGGGAGAGCAGGAAGGAGGGGAGGTGAAAGTTGAAATTTCTTTCATTTATTTTGTGGATAGATACTTTCACATGTAACTTTACAAAGTTTGTATTGGATCATCTGAAGAATTAACCTTCCTTTTAGTTCTTAGTTAACATCGTTAATTAAATGTTAATGTTTCATGTTTGATTCGTCCTGTCAGTGATGTTAGGTGCATTGTAGTACTGTAGTAATGTAGTTATGGATATTGACTAAAGTTAGAACTTAGAAGTGGAATTGTTTAAATTTAACCATATTCTATAAATATCTAAATTTAGTCATGTATTAAATAGAAGTATAGTTTGTAAGGACAGGTTTTAAAGCTTGTTCGATGGTGTTGTTTCAGTTTCCCGATTCGATTTTTGGCATAGCATCAACCTAAAAAGTTGGAAACGGAAGAGAAGCAATCACTGAGTTTCCCTTCTTTAAACATCTCAATATGCAGTCTTCTAAGTAACACGAGATTAAAAAGGTCAAGAGCACAATTGATGGTGAACATCAATTTGGAAAATTAATTTTCTACAAGCTTTCTTCACATCTAAATATAAATATTGTAAGATAAAGACTATCTCAAGATTAATTGAGGTACGTTTCACATCTAAATATTATAGGATAAGATTAGTTGAGGTACGTGTAAGCGGATTTAGTTGAGGTACGATTCACATCTAAATATTATAGGATAAATATTATAGAATGAAGGCTATGTTAAGATTAGTTGAGGTACG

Coding sequence (CDS)

ATGTGGTTTCCATTCACCAATAGGAAGAGGGGTCAATCCCCACTATCCTCCTCTCTCCGCCACCGCTTCCTTTCCGATTCCGGCCACCGCTTCTACCTTCTTTACTTCATCCATTTCTTCCTCCTCCGTTCGTCTGGAACTACAGTCTCCAGAATCGACTTGCTTATTTCTGTTCTGTTCCAGTCTCCTGATGGGAGGAGTGATGCTTCGATGGGTTTTTTGAATTTGAGATTTGTTTTTAGTTGTGAGGTTAGAATGAAAGGGAGGATTCGGTGTAGATGCTAA

Protein sequence

MWFPFTNRKRGQSPLSSSLRHRFLSDSGHRFYLLYFIHFFLLRSSGTTVSRIDLLISVLFQSPDGRSDASMGFLNLRFVFSCEVRMKGRIRCRC
Homology
[Close]
BLAST of CsGy3G027820 vs. NCBI nr
Match: KGN58628.1 (hypothetical protein Csa_3G702660 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 4.4e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MWFPFTNRKRGQSPLSSSLRHRFLSDSGHRFYLLYFIHFFLLRSSGTTVSRIDLLISVLF 60
          MWFPFTNRKRGQSPLSSSLRHRFLSDSGHRFYLLYFIHFFLLRSSGTTVSRIDLLISVLF
Sbjct: 1  MWFPFTNRKRGQSPLSSSLRHRFLSDSGHRFYLLYFIHFFLLRSSGTTVSRIDLLISVLF 60

Query: 61 QSPDG 66
          QSPDG
Sbjct: 61 QSPDG 65

[Close]
BLAST of CsGy3G027820 vs. TrEMBL
Match: tr|A0A0A0L9X1|A0A0A0L9X1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G702660 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.9e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MWFPFTNRKRGQSPLSSSLRHRFLSDSGHRFYLLYFIHFFLLRSSGTTVSRIDLLISVLF 60
          MWFPFTNRKRGQSPLSSSLRHRFLSDSGHRFYLLYFIHFFLLRSSGTTVSRIDLLISVLF
Sbjct: 1  MWFPFTNRKRGQSPLSSSLRHRFLSDSGHRFYLLYFIHFFLLRSSGTTVSRIDLLISVLF 60

Query: 61 QSPDG 66
          QSPDG
Sbjct: 61 QSPDG 65

The following BLAST results are available for this feature:
BLAST of CsGy3G027820 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58628.14.4e-28100.00hypothetical protein Csa_3G702660 [Cucumis sativus][more]
BLAST of CsGy3G027820 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G027820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G027820 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L9X1|A0A0A0L9X1_CUCSA2.9e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G702660 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G027820.1CsGy3G027820.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G027820Csa3G702660Cucumber (Chinese Long) v2cgybcuB111
CsGy3G027820CsaV3_3G032500Cucumber (Chinese Long) v3cgybcucB117
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G027820Cucumber (Gy14) v2cgybcgybB113
CsGy3G027820Cucurbita maxima (Rimu)cgybcmaB307
CsGy3G027820Cucurbita maxima (Rimu)cgybcmaB366
CsGy3G027820Cucurbita maxima (Rimu)cgybcmaB456
CsGy3G027820Cucurbita moschata (Rifu)cgybcmoB280
CsGy3G027820Cucurbita moschata (Rifu)cgybcmoB320
CsGy3G027820Cucurbita moschata (Rifu)cgybcmoB337
CsGy3G027820Cucurbita moschata (Rifu)cgybcmoB422
CsGy3G027820Cucurbita pepo (Zucchini)cgybcpeB308
CsGy3G027820Cucurbita pepo (Zucchini)cgybcpeB356
CsGy3G027820Cucurbita pepo (Zucchini)cgybcpeB378
CsGy3G027820Cucurbita pepo (Zucchini)cgybcpeB396
CsGy3G027820Bottle gourd (USVL1VR-Ls)cgyblsiB156
CsGy3G027820Bottle gourd (USVL1VR-Ls)cgyblsiB168
CsGy3G027820Melon (DHL92) v3.5.1cgybmeB157
CsGy3G027820Melon (DHL92) v3.5.1cgybmeB172
CsGy3G027820Melon (DHL92) v3.6.1cgybmedB157
CsGy3G027820Melon (DHL92) v3.6.1cgybmedB173
CsGy3G027820Watermelon (Charleston Gray)cgybwcgB175
CsGy3G027820Watermelon (97103) v1cgybwmB182
CsGy3G027820Wild cucumber (PI 183967)cgybcpiB110
CsGy3G027820Silver-seed gourdcarcgybB0365
CsGy3G027820Silver-seed gourdcarcgybB0460
CsGy3G027820Silver-seed gourdcarcgybB0756
CsGy3G027820Silver-seed gourdcarcgybB0802
CsGy3G027820Cucumber (Chinese Long) v3cgybcucB154
CsGy3G027820Watermelon (97103) v2cgybwmbB175
CsGy3G027820Wax gourdcgybwgoB212