CsGy3G026160 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G026160
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	mediator of RNA polymerase II transcription subunit 8 isoform X2
Location	Chr3 : 26932797 .. 26944439 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATTTTATCAACGCCACTTTATAAGAAAGAACATGAGAATCAAATAGTTATTGAAAATTACATTTAATTTGGGATCAAATAGATATACGCTTCCAGGTAAAACGGTATCAATCGGAGCACCTCAGGCAAGCCTGGCCTCGCAGCCAGACCCGAGCGAGATCTACACTCCCCGTACCCGTTGTACGTTACTCGCATCGAACAGGCCAACTGGTGTCTTTCGCTAATGGCGACCATTGACGGGGCGGTGCAGAATCAGCCTCAGCAGCAACAGCCTCTTCCGGCGCAGCAGGTGGTTTTCGCGGAAAGGCTAAACCAGGCAGTTCAGCAACAGTTGAACCTGGAGGCTCTGAAGAATCGAGCTACTACTCTCTTTAAAGCCATTTCTCGGATCCTTGAAGATTTTGATGTCTATGGTCGCACCAATACCACACCTAAATGGTCTACTTTCATTTTTCGCCTAGTTTTCTCTTGTGATATTTTCCAAATATGCTTGAATTTTTATGTTCGTCATTGGCGATTGATAGCACGTTAGTGTTAGAAAGTAATTTTTTTCTCTATCTCGTGGATTTACATACTGATTATTTTCTAGACATCAAAGCTTCTTAATATCCTTCTATCTATCTTTCTATTTATATTTCGATATTCTCCTCTACTGGCCGACTGTATAGTTGATTTTTACGCCAGGCAAGACATACTGGGGCAGTATTCTATGGTGAATCTCGAGCTTTTCAACATTGTTGACGAAATCAAGAAAGTTTCGAAGGCTTTCGTTGTACATCCAAAGAATGTTAATGCAGAGAACTCTACAAGTATGTCCCTGCATCCCTTCCAAGTATTTGCTGAAGTAAAAGGAAGAAATGCTTAGTTTTTGTTTTGTACGCTTGAACAATCATTCATTTATTTGTAAATTTTGATTTCAACTAATTTTTCTTTCTTTTTTCTTTTTGTGAGCCCAGTACTACCAGTTATGTTGTCCTCAAAACTATTGCCTGAGATGGAGGTAGATGACAATTCGAAACGAGAGCAGTTGCTTCTTGGGATGCACAACATGCCAGTATCTACACAGATTGAGAAATTAAAGGTACTAGAAGTTTGTTAAATAATTATAGGTCGTAGAACTCCCCGTGTTCTAAAGAAATTCATTAAATCACATACTTTCTTATGTATCTGGCATTTAGGTTTACTTTTCTTACAGACTAGAATTGAAATGATTGGAGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAAACTCGAAAAGCATATTGCTTCGGAATGCGTCAAGGGCCAGCAATAGCTCCAACCTTAGATAAGGCTCAAGCTGCAAAAATTCAGGAGCAAGAAAATTTACTCCGAGCTGCTGTTAACTTTGGGGAAGGTGATATTTTTTTACTTTTATAGTTATTGGTTAGTATCTTAGTTTTAATTATTTGTAGTTCATATATTGTTTAGTACTGCATCATGGCTTGTAAGTCCACTCATGATCGACATTTACCAAAAAAAGCAATATTATATTTAGACTTCTTGCCAACTTGTCACATATCTATGAAGATTACTGATTTGTATATTTATTTCTTTATTCATGATATCTTTATCAATTTTTTTGTGCATAATTGAATATGAACATTCTAACTTGTGTAACAGCCATTTCTCCATTGTTGTATGAATTAGACACAATAACTTGCTTTTTGGGAGAGTTGATTTGAATGACTAAATTGTTTGAAATTTTGTGAAAGAGTTGCTGAGGGAGAAAGGAGAAGTGGAGTGTTGTAGAATGGGAGTGATGCGACCTCGTAAAATGACCATATGAATTATGGAGGATGCATATATGGCGAAAAATAAATGACCATATGAATTATGGAGGATGCATATATGGCAAAAAATGCTCTGTTCCTTCGGTCAATGAGGCTGTAGGGATCCTAGCTTAGTTGGATCCCCTAAACCAATTGATCTATCATCCTTCTTCATCCTTCCCAAACACTTGAAGGCCCCAACTAAGTAGCAAGCCCACACTATGAGGCTTGGAAAACTGATTTAATTCTTGCAAAAGATGTGGGTATAAGGTGTTAAAAGTAATATCTGAAAAAGAGGAACCATTATGGATTGACCTAATGGTAAATAGGGGACATGACTTTGATAAAGGGTTGAGAGGTCACAGGCTCAGTCCCTGATCTACCTAGCTAGAATTTAGTGTCCTATGAGTTTTCTCGACATCCAAATGTTGTAGGGTTAAATCAATTGTTTTGTGAGATTAGTCGAGATGTGCATAAGCTGATCTAAACCCTTACAAATTTCAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAGAGGGTTGTCAACTAGTAATCTTTTCTATTTGAAGAGGCTTGTTTCCATTTAAAAAAAAAACAAGTAGCCTTTTCTATTAAATTCCAAGATCTAATATTCTCCTTCAAATATCTCTCTTGCAAAAATTCTCAACACACAATAGAATGCAAGATCTTCAATCATTTCCTCCGTACTGTTTCATTTTTCTCTCTTTTGTGCTCTTTAGAGCAAATGGCCAAAAGGGAGATGTTCTTTGTTGTCAAGCTTTGAGCCTAATGTTATAGTTGCAAAGTGGTTTGAGCTACAAACATTTCAGTTGTGTGATTGTATCTTGGAGGAGACATGTTAGACAATATCTGGTGCCTTGGTATAAAGGAATACGTAGTCTCTTAAAAGACAGTGAGATACATGCACCTCAATGTAATTGTTTACGCGTTTGTTTCTCAATATTTACTCCAATTTCTAGGTTATTTGTAAACCATTAGTTCGTTAGTTAAGCTGTTGGGCTTCGGCAAGACAAAAGGCTCATCAGATCCTTCGTTAGATTCCATATTTCTCTCAGTTTCAGTTACAAAAGTTTTTTGTATTGACAATAGAGCATTATTTTACGCAACTGATGGCCCTTTCTTTAGTGGCCTACCTTTATGTAGGATTATTCTTTTTGGATCCTGGTAAATTCTTTCATTTTTTTTTCTCAAATGTTGTTTTCTCATTATAAAGAAAAATAAAATAAAATAAAATAAAAGAGAAGTCCTTGATGCCGATGCATATGATTTATAACATTATTTTTTGGTTTACTTGGATCTATTGTTAAAACTTGGCTCAAACTTGAAGTTTCATTTGCTTCTATATTTGTCCTCTCCTAATTTTTTCAATAAGTGCAGTAGTCATGCCTTGTAAATGAATCTTATATTTACATGCAGGATTAAGATTACCTGGTGAGCAACGACAAATTACGCCAACACTTCCGATGCATTTGATAGATGTGCTGAATGCAGGTGATGGAGTGCAGAGTTTTAACGAAACGTCCGGTAACGTTCATTTGTCTTTTCAAACATAAATGGTTTATAGATTAATTTACTAAATTGCACTAACTTGTAATTGTTTAACAAAATCTCTTTCAGGTATGTATGCAAAGAGTACTCCTCTAACGTCAAATAATATTAGTAGTCAAGGAGCAGTGATACAGGTTAGATGATGTCCTTGCTCCTTGAAATGGTTTCTTAATGATTTATTTGCATCTTCTTAAGTTATAGAATGTAAACTAAGTTCTCCAAGGGGAAGCAACTTTTGGCTAACAGATTTCGTTTCATTCGAGGTTCTCTTATGTACGTGATTGAATTATCTTGTATCAGTTGGTTCCTAATTTTATTAGGATTTCTTTGGTTATGACTTATGAGTTGTATCTACCATTCATTCTTCCTTGAAAGATGACGTTAGATAGTATAGTACTGTTAGGAATAAAATAATTGAACATTTTCTTGCCGACTGTCTCCTATTCTCGCAATTCTTTCTTTTCCCTGCTCTTCCTATGATTATTTGCATTATTATTGGTGTTGAACTCGGGCACTTGGATTGTTTGGTTTGCACATTTAGATATAATAAGAACTCTACATGTTATTTTTGAGGCTAATGTATGGATCAAAATTAATAGGGTAATGATAGAACACCAAGTAGTGTGTTCTATTATTTTATTAAACAACCAAACTTTTACAGAAAATAGTACTAACACAACCTTGAAAACAAAGAACAACACAAGAACTAATATAGAAATGAACCAAGTTCAACATAAAACATCAAAACAGAAAAGTACTTCACGATAATGGAAATAACTTGCAACAGACTACAAAAACTGAAAACTTTTTGCATTCCCTGCTCTCCAGGAAATTACAGCCCTCCACTTCCAGAAACTGATTAACCATCGCCATCTTTCCTTCCATCTCTCCCTTTTAACCTCCCCCCATGTAACTAACTGTGGTCTCCACTAAGGTGGTTGGTCCCCACTAAGGTGGTTTCCACTTCCTCCACTTCCATCACCTGTGCACGTGCCACTCCATTTGTCTTCCTTCTGCCATATTGTATTACAATTGGTGGTCTATCATTATTCTTCCTCTCCAAAGACACCTTTGTCCTCAAGTTGGAAATGAGGACCCTGTCGTGCAAAATCATCACAATTCTCCCATGTAGCCTCATGAGGTGGTATTCTTTTCCAACTAATAAGCACTTCCCACTCCTTTATTGCTGGATTTTTACGATAGCCAAAAATATCTGCTGGTAGTAATTCTTGAATTGTAGGAACATCATCAATCCCATACAATTCGGCAAATGTCATTCCTCCCTCCAAAGCTCGACATTCTATCAAGAAACCTTGATCATATGGTGTCCATGTCTTCATCATGTGTTTCAAACTCACTCTAGTCTTTTTCAAACTCAGGTCACCCCTTAGAACAATCTTCTTTTCATTTTGTATGAAAGTTGAAGTGAGTTTCCGCCAATCTACTTCAGTTACTACCCCCAGCGTGTGCAACCATTGCATTCCAAGGATGACATCCACTCCTCCCAACTCTAATGGTAGGAAATTATCAACAAGTTTCCAATCACCCAATGCTATTTCCACTTGACTACATATGCCCTTTCCCTTTTCTTTCACAGCAGTACCCGACCCCATAGTGAGAAGTTTCCTCCAAGGACAATTTCAATTGAGCCACTAATTTTTCAGAAATAAAGTTATGCGTTGCACTGCAATCTATCAAAACCACCACTGACATCCCTTGAATTACTTCTTTTATTTTTATTGTGCCCGGATTTGTTAATCCCACCACCAAATTTAATGACAATTCTATCACTGGTTCTTTTTTTTTCAATATCAAGTTCAATAGCTTTTACCTTAGGTTCCTCTGTATAGTCATCCTCTTCCACTACCAATTCCTCCCCATTTTCTTGAACAACTGAGTTCCTTCTGATCCTTCACCTTACATCTATGGCCTGCATAAAATTTTTCCTCACAACGAAAACAGAGTTCTTTCTCACATCTGGCTTGAAACTCAGCATCAGAAAGCCGTCTTGATGGTCCTTCCTGTCGATTAGTTTCCTTAACCACTCCTCGAAGTGTGATAATCCTCATTGGAACAGCACCTCCTAACTTATTGTCATTGAAAACTATAGGAAATTGAGTATTTAAAGAAGTAGAAACCTGGATTTTACCATCCCCTGCATATTTGAGGTCTGATTCACCCCTTATCACCTCTCGGTTCTCAATTTTTTAGGCCAACTTCATCATATGAGCAAGCCCAACTGGTTCCAGCATTCCATTTCTGCCTTAATCCAAGGTTTCAAACCATTCATAAATGTCTCTTCTATGACTGTCTTCTGCAGAAAAGGCAAAGGTGCCACCAATTTATCAAATAACCTTTTGTATTCATCCACTGTAGTGTCTTGTTTTACTGTTAAAAATCTGCCCAAGATTGATCCCTCACGGCCTGATCGAAATTGAATAATAAGTCTTCTCTTTAAATCTTCCCAATTAACAAACGGTTCACGATCTTCATGAGATCTATACCAATCCAATGTTGCTCCATAAAAACTAATGATGGACAGTCATTTTTCTGACTCACTCAGTTTGTGTATCTGAAAGTATCTCTTAGCTCTAAACAACCAAGAATTAGGAGGATCATTTCCCACAAAACTTGCATTTCAATTTTCTAAATTTGCTTCTGTCGCCTGCAGAATCTTCACCCTCCAACTTAGTGTGTTTTTCATCAGATTTTTCTTCCATCATCATCGATTCACTAACATCAACCATGCTGTCAATTTTACTTGATGATCCTTCCGGTACTTCTTCCATCGTTGTCTTCCCTTGATCATTCAACAGTGTCTGCTGTTGCTGTTGTTGCTTCTCAGCCTGCACTCCTAGCCCTTCAATACGCTTTGCCAAAGATGAAATGTCTTCCTTGATTGTTGGCAGATCATGTAATTCTGTTCGAATGCCGGATATTTCTTGATCTACCGTTTCCAACTTTTCCTCGATTTGCTTTTGAGCCATGGTATTGAACTTCACATATTCAAACGTCTCTGATACTAAAATGATAGAACACCAAGAAGTGTGTTTTATTATTTTATTAAACAGCCAAACTTTTACAGAAAATAGTACTAACACAACCTTGAAAACAAAGAACAACAGAAGACCTAATACAAAAATAAACCAATTTCGAAATAAAACATCAAAACAGAAAAGTACTTCACGATAATGGAAATAACTTGCTAGACTACATAAACTGAATACTTTCTGCATTCCCTGCTCTCCAAGAAATTACAGACCTCCACTTCCAGAAACTGATTAACCACCCCTTCTTTCCTTCTATCTCTCCCTTTTAACCTCCCCCCATGTAACTAACTGTGGTCCCCACTAAGGTGGTTTCCACTTCCTCCACTTCCATCACCTGTGCACGTGCCATTCCATTTGTCTTCCTTCTGCCATATTGTATTACAATTGGTGGTCTATCAGGTAAGCTTAGGAGATAGGTGTCTGCTATTATGTGGGATCTCTCGGTGAAGTGAATAATCACGTGTTTTAACGGTTGGAAATGTTTAATAAAAAAACGGGTGGAAAAGGTAAGGAAGAGACTTCTCTTGAAAGAAGAGCTTCTTCTCCAAAGTTGGTAACTCAATTTGATTCTATTGATTTTGAGTGAGGTTCCCATTTATTATCTTTTCCTTTTTTGAGCCTCGGGTTTTGTTTATAGATGCATCTTATGAGGGATGTCCATCCTTTGGGAAGAGATGAATGGAGGAAAAGGCTCACATTTTGTTAATTGGTGGGTTAATGGGAAGAATATAAGCATAGCATTCATTGCGTTGAATGGTTGTCTAGTGGGCTTAAATGATATGTACCATAACCTGTGGAAGAATATTTTCCTTGAGCTCTCCTCCTTTTCCCATTTTGTCTGTTGTGTAGTGGGTGAAGGTAAGGAAACATATGATTGGGAGGATCGGTGGGTGAGGGATAGACCACCCTTGCTTTATGTTTCCTTGTTTATACAATTTCCCCTCTTAAAGAACCCTTTGATCTCTAGTTTCTTTGTTTGGACGAGGATCTTTGTCTTGTTCTCATTTGGGTTCCATTGTTCCCTGTTCAATAGTGAAATGGCAGAGGTTGTCTCTTGTCTATATTTGATAGAAGAGTGAGTTTCATTTTAGGATTGAGAGAAGGATTGTTTGTGTTTGGAGTCCTAATCCCTTAAAGGGATTCTCTTGTAAGTTAATCTTTCGGCATTTGTTGGACCCTTCTCCCATTAGTGACTCAGCCTTTGATGCTTTGTGGAGAATTAAGGTTCCTAGAAAAGTTAAATTCTTCACGTGGAAAGTCTTACATGGTCGTGTGAACATCATGAATGGACTTTCAAGGAAGATGCCCCAATTAGTGGGTCCTTTTTGGTGTATCCTTTGATGGAAGGAAAGGGAAAATTTAAATCATATGGTTCGAATTTGTGGATTTCTTCATTTAATTTTGCAGAAGTTAGGGCGCGTTCCTCGTTTAACTTTCTTTAGAGAAATTTAATGAGATGATTAAACAAATTTGGGAGGAGATGAATGATAGGGTGTTTCATAGAAGGGAAAGGGCTCACAACGAGGTTTGGTCCCTCATTAAATTTCATGTATTCCTTTGGGTTTCAATTTCGAAGATCTTTTGTAATTATTCCATCGGTAACATTTTACTTAGTTGAACCCCTTCTTCTAGTTGGGGTGTTTTGGTGGGTTTGTTTTTTTGTATGCTCTTGTTTTCTTTCATTCTTTCTCAATGAAAGTTATGCTAAAACAAAAGACTTTTTCTATTTACTCTATGGGCAACATTTTACGTAGTTGGAAGCTTTTTATGTAGTGGGGTTTTTTGTAGGCTTGGTTTTTTATATGCCATCATATTCTTTTATTTCTTCTCGATTAAAATTTCTATTAAAAAAATAGTTACATACTTCATATCATCATGACATCAATAGTTTTTTTTAATCTTACTTTGTCGTTGTTCTATAGACATGCATATAATCAGGAGGTTCAATTCTTATTTCTTTGTAAGTGTGCAGATTTTTCCATTCAAGACCTAAGCTTAAATTGCAAGCTATCATATTTCCAGCTTCGTTGATTGGCTGATTATGTTAGTTTATGTAATTTTGATTGAACAAAAATTGTGGAACATGACTTGTACTCATATGACTATTTTCTGGTTTGTGAGCCTTGTATGACTTCATTTTGGTAGTTGGATATGATGAGGATGCTACGGGGTGTCAACCTAGTTAAGATGCCCAAATGCGCCTCCTAGTCCTTTTGACCTTTTGCTTTTGTATCCATTTTGTACGTTGAGCTTTGTCTCATTTCATTATCTTGATGAAGAGACTGTTTCCTTTTTTTAAAAAAATTCTTTGTAAGAATGCTGTTGATCGTCCTTTTCACTTGATATTTAAAGCAGCCTCCTGGATCACAACTTGTTGGAAGATCAGCTGCTTCGCCTTCTGGTGCTACGAGTGCCACATCCTTTGACAACTCAACCTCGCCAATGCCATATGCTAACTCTCCAAGGTCAAGTGCGAACGTTATGAACACACCTTCTCCTCAACAGCAGACCCAACAACAGCAACAGCAGCAACTTCAGCAGGTTCAACAAAGGAAATTGATGCTACCTCAGCATCAGCATCTCCTTGCTCAACAACAGATGAGACAGTCTTCTATGCAAGGAATAGGACAGGTAATGATTTCTGATACTTGAATAAATAATAGCACTTGTGACAACTTAATTGGTAACAATTTTTCTCAATGTTATTAGCCTCACATTTTTTTAAAGAAACAATGGACCTCGACCTCCTATAGATATATACATCAAAAGGTATACAGCCTAGGGCCGAGGGTATAGGAAGCCCCCTTCCAAGAGGCTTACTACATGGCAAGAACTTGCCAATCATTTGATAATCATCAAGATGTTGTAGTTACAAAAGAATTTTGAATGTAAAGAGGCCCACCAAGAAGCCATATTTTGTACTTAGTGGTACAACTACCCAAAGTCCTAGCTTTGCTTATCTTTTCCTCTGGGACCTTCTTCGTTCATGGAGTCGGTAAAATTAGATATTAACATTTATGGTACTATTGAAATTAGATATTAACACTTATTGTACTATTAAAATTAGATATTAACATTTATGGTGCTATGTTGGGCAGAAACCATTCTTCGACTTATAATAGGAAAAAAAATGCATTCATGGCAATTCCTGGATATCAAAATAACCGTGGCCCATTCCATATTATTTTATTGTCTTTCTCTTAGTGATAAGCATCATGTTTGTTTATGGATAGCTATTGCAAAACATTTTCCCCATCCATTTATACCTTTTTTCTTTTTTGAAAAGGAAACCGATCTCCCCATCGACCTATACTATACACTCATTACTTGAGCAATGCCATATTTTAATTGAAGTCCCATAAAAAACATTTTTAATTGGTAGTCGCTGTGCTTTCAATTGGGTGACCACTCAACTCATTACACAAGGATAATTACCAATGTAGAAGCATTAACTGAATATACATGGAGTTCAGTTTCCTTAATCCACAATTCAAACTGTGTTCCTTAATATAGTCTTGTTTCCTTTTCAAAAAAAAAAAAAAAACTGTGGTCCTTGATTTCTCTGGAATCAGTTATATTTTCTTTTATTATATGACCATGCCAGATTCATGGACAGCATCAGATGCAGTTTTCACAGCCACTAGCACACCAGCAATTTCAGGGAAGGCAGATGTCTTCTGGGCATGTTCAACATGGAATTACTCAAAGCCAACTAGGCCAAGGAAATCAAATGAATCGTCATTTGCACCAGTTTTCTGGTGCTGCTAACAGTAGTTTGTTTAATGTTGCCCAGACTACACCAACTTCTCAAATGGTCAGATATCTCCATCCTTTATTTTGTTAATAATTAGTGTTCTCTTTTCTTTCTTTTAGATGTATTTGGATTATATTACCTTCAATCAAGTAGATTGCATGAACTGTGAAGTAAATGGTATGCTGTTCAAGGTTTGTAGATACTTGAGGTTAATTTTCCACCCTCAAACATGTTGTTTCAAGGAGTGAAATTACTGCCTACTGCATATGAAGAGAAGACTACTTTGACCCTTGTATTGACCTCTTGGAATACAGGCTTTTCTTTTCCTCTCCATTCACAAGTAGCTGTGTTGCTTTAGCGAAATTAGAACTGAAGGTCCTAGAGCTCCATCTGGGTTGTTCCTTTTGGCAAGTTTTCTTCTCGTTTTGTTAACATGGCCAAGTATTGTTGGTACTTTTATCTGGTGACGTGATGCTGCCAATTTGTCCTATTACCCACTAATTCCACTTTATATCTAAATAACAATTTCTCTTATATCAAATCCTACTTTTATCAATTAATATAGCCAAATGATACATTCTTTTTTTCAGATAAGAGAGTTTCCATTCTCTAAGAAGGGAGAATGTATTAAAAGACTGTTCAGTTGCAAAATAAATCTTCAGCTGGTCACGAGAACTGTTGCTTAGTTACAAAATTGATTAAAGACTTTAGAGAGTCAGAGACTCAAGACATTCCCAAAATGAGATTTCACAACAACATTAAATAAAATTGGCTTGTAGCTGTGCAGCAACCATTTTCTTCCACTGCAAATTAAATATGAAAGTAATATGACACGAAGTCCTCAAACTGTAGATGTAATTTTGAATCACTTATTTTTTTGACACCTGTAGTCAGGATTGATTTCACTAGCAGTTAATCCAGATCTAAAATTTGAGTTCCTTTCACAAATCTCTTTGAGATATTTTTTGGGGTAGCATTTTGCTCAGTCTATGTCAAATTTGTAGCCTTGAGATGAGGCCTATAGGTTGAAAATTTGCCACGAAAGTGCTGCTTGGACATGTATTCTAGGAGAACATTTTTAACTTTAACACCATTAAAAGTTGGGGTGCTGACTCCACTCAGAATTTTTAAAAGAGAAACCAATGTTGATTTTGGTCCAATGCAGTTAAAAGGCTTTGTTATCGGAAATTTGGTTTGAGCGCAATCAAAGAATCTTTCAAAACAAAGCTTCCCCATGGACAACTCATGCTGAGATTGCGAGGATCAATAAATCCTCATGGTGCTCCTTATCAAAAGCTTTTGAAGCGTTTTCCATTCAAGACATTAGCCTTAATTGAAAGACTTTTATATTTCCCCAAATTTAATCTTGTTCTTGTACGTAGTTGATGTTTCTATTATGTTTTTTGCATCGGACTCTCTTGTTCTGTTTTGCTGGACAGTTTTGGTCCCTTGTTTATTTCTAGGAGATGATGA

mRNA sequence

ATTTATTTTATCAACGCCACTTTATAAGAAAGAACATGAGAATCAAATAGTTATTGAAAATTACATTTAATTTGGGATCAAATAGATATACGCTTCCAGGTAAAACGGTATCAATCGGAGCACCTCAGGCAAGCCTGGCCTCGCAGCCAGACCCGAGCGAGATCTACACTCCCCGTACCCGTTGTACGTTACTCGCATCGAACAGGCCAACTGGTGTCTTTCGCTAATGGCGACCATTGACGGGGCGGTGCAGAATCAGCCTCAGCAGCAACAGCCTCTTCCGGCGCAGCAGGTGGTTTTCGCGGAAAGGCTAAACCAGGCAGTTCAGCAACAGTTGAACCTGGAGGCTCTGAAGAATCGAGCTACTACTCTCTTTAAAGCCATTTCTCGGATCCTTGAAGATTTTGATGTCTATGGTCGCACCAATACCACACCTAAATGGCAAGACATACTGGGGCAGTATTCTATGGTGAATCTCGAGCTTTTCAACATTGTTGACGAAATCAAGAAAGTTTCGAAGGCTTTCGTTGTACATCCAAAGAATGTTAATGCAGAGAACTCTACAATACTACCAGTTATGTTGTCCTCAAAACTATTGCCTGAGATGGAGGTAGATGACAATTCGAAACGAGAGCAGTTGCTTCTTGGGATGCACAACATGCCAGTATCTACACAGATTGAGAAATTAAAGACTAGAATTGAAATGATTGGAGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAAACTCGAAAAGCATATTGCTTCGGAATGCGTCAAGGGCCAGCAATAGCTCCAACCTTAGATAAGGCTCAAGCTGCAAAAATTCAGGAGCAAGAAAATTTACTCCGAGCTGCTGTTAACTTTGGGGAAGGATTAAGATTACCTGGTGAGCAACGACAAATTACGCCAACACTTCCGATGCATTTGATAGATGTGCTGAATGCAGGTGATGGAGTGCAGAGTTTTAACGAAACGTCCGGTATGTATGCAAAGAGTACTCCTCTAACGTCAAATAATATTAGTAGTCAAGGAGCAGTGATACAGCCTCCTGGATCACAACTTGTTGGAAGATCAGCTGCTTCGCCTTCTGGTGCTACGAGTGCCACATCCTTTGACAACTCAACCTCGCCAATGCCATATGCTAACTCTCCAAGGTCAAGTGCGAACGTTATGAACACACCTTCTCCTCAACAGCAGACCCAACAACAGCAACAGCAGCAACTTCAGCAGGTTCAACAAAGGAAATTGATGCTACCTCAGCATCAGCATCTCCTTGCTCAACAACAGATGAGACAGTCTTCTATGCAAGGAATAGGACAGATTCATGGACAGCATCAGATGCAGTTTTCACAGCCACTAGCACACCAGCAATTTCAGGGAAGGCAGATGTCTTCTGGGCATGTTCAACATGGAATTACTCAAAGCCAACTAGGCCAAGGAAATCAAATGAATCGTCATTTGCACCAGTTTTCTGGTGCTGCTAACAGTAGTTTGTTTAATGTTGCCCAGACTACACCAACTTCTCAAATGATACTTGAGGTTAATTTTCCACCCTCAAACATGTTGTTTCAAGGAGTGAAATTACTGCCTACTGCATATGAAGAGAAGACTACTTTGACCCTTGTATTGACCTCTTGGAATACAGGCTTTTCTTTTCCTCTCCATTCACAAGTAGCTGTGTTGCTTTAGCGAAATTAGAACTGAAGGTCCTAGAGCTCCATCTGGGTTGTTCCTTTTGGCAAGTTTTCTTCTCGTTTTGTTAACATGGCCAAGTATTGTTGGTACTTTTATCTGGTGACGTGATGCTGCCAATTTGTCCTATTACCCACTAATTCCACTTTATATCTAAATAACAATTTCTCTTATATCAAATCCTACTTTTATCAATTAATATAGCCAAATGATACATTCTTTTTTTCAGATAAGAGAGTTTCCATTCTCTAAGAAGGGAGAATGTATTAAAAGACTGTTCAGTTGCAAAATAAATCTTCAGCTGGTCACGAGAACTGTTGCTTAGTTACAAAATTGATTAAAGACTTTAGAGAGTCAGAGACTCAAGACATTCCCAAAATGAGATTTCACAACAACATTAAATAAAATTGGCTTGTAGCTGTGCAGCAACCATTTTCTTCCACTGCAAATTAAATATGAAAGTAATATGACACGAAGTCCTCAAACTGTAGATGTAATTTTGAATCACTTATTTTTTTGACACCTGTAGTCAGGATTGATTTCACTAGCAGTTAATCCAGATCTAAAATTTGAGTTCCTTTCACAAATCTCTTTGAGATATTTTTTGGGGTAGCATTTTGCTCAGTCTATGTCAAATTTGTAGCCTTGAGATGAGGCCTATAGGTTGAAAATTTGCCACGAAAGTGCTGCTTGGACATGTATTCTAGGAGAACATTTTTAACTTTAACACCATTAAAAGTTGGGGTGCTGACTCCACTCAGAATTTTTAAAAGAGAAACCAATGTTGATTTTGGTCCAATGCAGTTAAAAGGCTTTGTTATCGGAAATTTGGTTTGAGCGCAATCAAAGAATCTTTCAAAACAAAGCTTCCCCATGGACAACTCATGCTGAGATTGCGAGGATCAATAAATCCTCATGGTGCTCCTTATCAAAAGCTTTTGAAGCGTTTTCCATTCAAGACATTAGCCTTAATTGAAAGACTTTTATATTTCCCCAAATTTAATCTTGTTCTTGTACGTAGTTGATGTTTCTATTATGTTTTTTGCATCGGACTCTCTTGTTCTGTTTTGCTGGACAGTTTTGGTCCCTTGTTTATTTCTAGGAGATGATGA

Coding sequence (CDS)

ATGGCGACCATTGACGGGGCGGTGCAGAATCAGCCTCAGCAGCAACAGCCTCTTCCGGCGCAGCAGGTGGTTTTCGCGGAAAGGCTAAACCAGGCAGTTCAGCAACAGTTGAACCTGGAGGCTCTGAAGAATCGAGCTACTACTCTCTTTAAAGCCATTTCTCGGATCCTTGAAGATTTTGATGTCTATGGTCGCACCAATACCACACCTAAATGGCAAGACATACTGGGGCAGTATTCTATGGTGAATCTCGAGCTTTTCAACATTGTTGACGAAATCAAGAAAGTTTCGAAGGCTTTCGTTGTACATCCAAAGAATGTTAATGCAGAGAACTCTACAATACTACCAGTTATGTTGTCCTCAAAACTATTGCCTGAGATGGAGGTAGATGACAATTCGAAACGAGAGCAGTTGCTTCTTGGGATGCACAACATGCCAGTATCTACACAGATTGAGAAATTAAAGACTAGAATTGAAATGATTGGAGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAAACTCGAAAAGCATATTGCTTCGGAATGCGTCAAGGGCCAGCAATAGCTCCAACCTTAGATAAGGCTCAAGCTGCAAAAATTCAGGAGCAAGAAAATTTACTCCGAGCTGCTGTTAACTTTGGGGAAGGATTAAGATTACCTGGTGAGCAACGACAAATTACGCCAACACTTCCGATGCATTTGATAGATGTGCTGAATGCAGGTGATGGAGTGCAGAGTTTTAACGAAACGTCCGGTATGTATGCAAAGAGTACTCCTCTAACGTCAAATAATATTAGTAGTCAAGGAGCAGTGATACAGCCTCCTGGATCACAACTTGTTGGAAGATCAGCTGCTTCGCCTTCTGGTGCTACGAGTGCCACATCCTTTGACAACTCAACCTCGCCAATGCCATATGCTAACTCTCCAAGGTCAAGTGCGAACGTTATGAACACACCTTCTCCTCAACAGCAGACCCAACAACAGCAACAGCAGCAACTTCAGCAGGTTCAACAAAGGAAATTGATGCTACCTCAGCATCAGCATCTCCTTGCTCAACAACAGATGAGACAGTCTTCTATGCAAGGAATAGGACAGATTCATGGACAGCATCAGATGCAGTTTTCACAGCCACTAGCACACCAGCAATTTCAGGGAAGGCAGATGTCTTCTGGGCATGTTCAACATGGAATTACTCAAAGCCAACTAGGCCAAGGAAATCAAATGAATCGTCATTTGCACCAGTTTTCTGGTGCTGCTAACAGTAGTTTGTTTAATGTTGCCCAGACTACACCAACTTCTCAAATGATACTTGAGGTTAATTTTCCACCCTCAAACATGTTGTTTCAAGGAGTGAAATTACTGCCTACTGCATATGAAGAGAAGACTACTTTGACCCTTGTATTGACCTCTTGGAATACAGGCTTTTCTTTTCCTCTCCATTCACAAGTAGCTGTGTTGCTTTAG

Protein sequence

MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNSTSPMPYANSPRSSANVMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQHLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQMILEVNFPPSNMLFQGVKLLPTAYEEKTTLTLVLTSWNTGFSFPLHSQVAVLL

Homology

[Close]

BLAST of CsGy3G026160 vs. NCBI nr
Match: XP_004144418.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucumis sativus])

HSP 1 Score: 734.2 bits (1894), Expect = 2.9e-208
Identity = 437/441 (99.09%), Postives = 439/441 (99.55%), Query Frame = 0


Query: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60
           MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF
Sbjct: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60

Query: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
           DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120

Query: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
           SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180

Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN 240
           FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN 240

Query: 241 AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNS 300
           AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNS
Sbjct: 241 AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNS 300

Query: 301 TSPMPYANSPRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSS 360
           TSPMPYANSPRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSS
Sbjct: 301 TSPMPYANSPRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSS 360

Query: 361 MQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAA 420
           MQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAA
Sbjct: 361 MQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAA 420

Query: 421 NSSLFNVAQTTPTSQMILEVN 442
           NSSLFNVAQTTPTSQMI  ++
Sbjct: 421 NSSLFNVAQTTPTSQMIPNIS 441

[Close]

BLAST of CsGy3G026160 vs. NCBI nr
Match: XP_011651696.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 729.6 bits (1882), Expect = 7.2e-207
Identity = 436/442 (98.64%), Postives = 438/442 (99.10%), Query Frame = 0


Query: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60
           MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF
Sbjct: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60

Query: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
           DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120

Query: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
           SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180

Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN 240
           FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN 240

Query: 241 AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVI-QPPGSQLVGRSAASPSGATSATSFDN 300
           AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVI QPPGSQLVGRSAASPSGATSATSFDN
Sbjct: 241 AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN 300

Query: 301 STSPMPYANSPRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQS 360
           STSPMPYANSPRSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQS
Sbjct: 301 STSPMPYANSPRSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQS 360

Query: 361 SMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGA 420
           SMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGA
Sbjct: 361 SMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGA 420

Query: 421 ANSSLFNVAQTTPTSQMILEVN 442
           ANSSLFNVAQTTPTSQMI  ++
Sbjct: 421 ANSSLFNVAQTTPTSQMIPNIS 442

[Close]

BLAST of CsGy3G026160 vs. NCBI nr
Match: XP_008465098.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucumis melo])

HSP 1 Score: 718.8 bits (1854), Expect = 1.3e-203
Identity = 424/441 (96.15%), Postives = 426/441 (96.60%), Query Frame = 0


Query: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60
           MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF
Sbjct: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60

Query: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
           DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120

Query: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
           SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180

Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN 240
           FGMRQGPAI PTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQIT TLPMHLIDVLN
Sbjct: 181 FGMRQGPAITPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLN 240

Query: 241 AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNS 300
           AGDGVQSFNETSGMYAKSTPLTS NISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNS
Sbjct: 241 AGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNS 300

Query: 301 TSPMPYANSPRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSS 360
           TSPMPYANSPRSS      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 301 TSPMPYANSPRSSANIMNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 MQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAA 420
            QGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAA
Sbjct: 361 XQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAA 420

Query: 421 NSSLFNVAQTTPTSQMILEVN 442
           NSSLFNVAQTTPTSQMI  ++
Sbjct: 421 NSSLFNVAQTTPTSQMIPNIS 441

[Close]

BLAST of CsGy3G026160 vs. NCBI nr
Match: XP_008465097.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucumis melo])

HSP 1 Score: 714.1 bits (1842), Expect = 3.1e-202
Identity = 424/442 (95.93%), Postives = 426/442 (96.38%), Query Frame = 0


Query: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60
           MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF
Sbjct: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60

Query: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
           DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120

Query: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
           SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180

Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN 240
           FGMRQGPAI PTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQIT TLPMHLIDVLN
Sbjct: 181 FGMRQGPAITPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLN 240

Query: 241 AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVI-QPPGSQLVGRSAASPSGATSATSFDN 300
           AGDGVQSFNETSGMYAKSTPLTS NISSQGAVI QPPGSQLVGRSAASPSGATSATSFDN
Sbjct: 241 AGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN 300

Query: 301 STSPMPYANSPRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQS 360
           STSPMPYANSPRSS      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 301 STSPMPYANSPRSSANIMNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 SMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGA 420
             QGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGA
Sbjct: 361 XXQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGA 420

Query: 421 ANSSLFNVAQTTPTSQMILEVN 442
           ANSSLFNVAQTTPTSQMI  ++
Sbjct: 421 ANSSLFNVAQTTPTSQMIPNIS 442

[Close]

BLAST of CsGy3G026160 vs. NCBI nr
Match: XP_022956013.1 (mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucurbita moschata])

HSP 1 Score: 594.3 bits (1531), Expect = 3.6e-166
Identity = 374/448 (83.48%), Postives = 392/448 (87.50%), Query Frame = 0


Query: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60
           MAT+DG VQNQPQQQQPL A Q V AERLNQAVQQQLNLEA+K RATTLFKAISRILEDF
Sbjct: 1   MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60

Query: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
           DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120

Query: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
           SKLLPEMEVDDNSKR+QLLLGM NMP+STQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180

Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN 240
           FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLP +QRQITPTLPMHL+DVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240

Query: 241 AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNS 300
            GDGVQSFNETSGMYAK+TPLTS+NI   G+++QPPGSQLVGRSAASPSG   ATSFDN+
Sbjct: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQPPGSQLVGRSAASPSG---ATSFDNT 300

Query: 301 TSPMPYANSPRSS-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           TSP+PYANSPRS+       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 TSPLPYANSPRSTANVMNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHL 420
           XXXX                              QMSSGH+QHGITQSQLGQGNQMNRHL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMSSGHIQHGITQSQLGQGNQMNRHL 420

Query: 421 HQFSGAANSSLFNVAQTTPTSQMILEVN 442
            QFSGAANSSLFN AQTTP+SQMI  ++
Sbjct: 421 SQFSGAANSSLFNAAQTTPSSQMIPNIS 445

[Close]

BLAST of CsGy3G026160 vs. TAIR10
Match: AT2G03070.1 (mediator subunit 8)

HSP 1 Score: 384.0 bits (985), Expect = 1.3e-106
Identity = 270/457 (59.08%), Postives = 328/457 (71.77%), Query Frame = 0


Query: 14  QQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQ 73
           + QP        AE+LN  ++++LNLE+LK RA +L KAI+RILEDFD YGRTNTTPKWQ
Sbjct: 2   ETQPQXXXXXXVAEKLNPKLEKELNLESLKTRAVSLAKAIARILEDFDAYGRTNTTPKWQ 61

Query: 74  DILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNS 133
           DILGQYSMVNLELFNIV+E+K+VS AFVV PKNVNA N+ ILPVMLSSKLLPEME DDN+
Sbjct: 62  DILGQYSMVNLELFNIVEEVKRVSNAFVVLPKNVNAMNAAILPVMLSSKLLPEMETDDNA 121

Query: 134 KREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTL 193
           KREQLL G+ ++P+  QIE+LK R++MI AACE+AE++LA+TRKAY FG RQGP++ PT+
Sbjct: 122 KREQLLQGVQSLPIPMQIERLKARMDMIAAACENAERVLADTRKAYGFGTRQGPSMLPTM 181

Query: 194 DKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLNAGDGVQSFNETSG 253
           DK QAAKIQEQE +LR AVN G+G +LP +QRQIT  LP HL DVL   D        +G
Sbjct: 182 DKGQAAKIQEQEKMLRDAVNDGKGTQLPPDQRQITTALPPHLADVLIIND--------AG 241

Query: 254 MYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNSTSPMPYANSPRSS 313
             A   P  SNNI++QG ++Q  G+Q VGRSAASPSG     +FDN+TSP+PY+NSPR++
Sbjct: 242 KIA--LPGQSNNINNQG-MMQVSGTQFVGRSAASPSG----PNFDNTTSPLPYSNSPRAT 301

Query: 314 ----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSSMQG 373
                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    QS +  
Sbjct: 302 GMVNVPSPQHQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLGQSQIPA 361

Query: 374 IGQIHGQHQMQFS------------QPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNR 433
           +  +HGQ Q +F                    FQ RQ+S GH+QH ++Q QL     MNR
Sbjct: 362 LHDMHGQAQQKFQXXXXXXXXXXXXXXXXXXXFQARQLSGGHIQHSMSQGQLNPA--MNR 421

Query: 434 HLHQFSGAANSSLFNVAQTTPTSQMILEVNFPPSNML 449
           HL+QFSG ANS+LF  AQ +P+SQMI  ++   S  L
Sbjct: 422 HLNQFSGGANSALFTSAQGSPSSQMIPNMSSMQSQTL 441

[Close]

BLAST of CsGy3G026160 vs. Swiss-Prot
Match: sp|Q4V3C1|MED8_ARATH (Mediator of RNA polymerase II transcription subunit 8 OS=Arabidopsis thaliana OX=3702 GN=MED8 PE=1 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 2.4e-105
Identity = 270/457 (59.08%), Postives = 328/457 (71.77%), Query Frame = 0


Query: 14  QQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQ 73
           + QP        AE+LN  ++++LNLE+LK RA +L KAI+RILEDFD YGRTNTTPKWQ
Sbjct: 2   ETQPQXXXXXXVAEKLNPKLEKELNLESLKTRAVSLAKAIARILEDFDAYGRTNTTPKWQ 61

Query: 74  DILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNS 133
           DILGQYSMVNLELFNIV+E+K+VS AFVV PKNVNA N+ ILPVMLSSKLLPEME DDN+
Sbjct: 62  DILGQYSMVNLELFNIVEEVKRVSNAFVVLPKNVNAMNAAILPVMLSSKLLPEMETDDNA 121

Query: 134 KREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTL 193
           KREQLL G+ ++P+  QIE+LK R++MI AACE+AE++LA+TRKAY FG RQGP++ PT+
Sbjct: 122 KREQLLQGVQSLPIPMQIERLKARMDMIAAACENAERVLADTRKAYGFGTRQGPSMLPTM 181

Query: 194 DKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLNAGDGVQSFNETSG 253
           DK QAAKIQEQE +LR AVN G+G +LP +QRQIT  LP HL DVL   D        +G
Sbjct: 182 DKGQAAKIQEQEKMLRDAVNDGKGTQLPPDQRQITTALPPHLADVLIIND--------AG 241

Query: 254 MYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNSTSPMPYANSPRSS 313
             A   P  SNNI++QG ++Q  G+Q VGRSAASPSG     +FDN+TSP+PY+NSPR++
Sbjct: 242 KIA--LPGQSNNINNQG-MMQVSGTQFVGRSAASPSG----PNFDNTTSPLPYSNSPRAT 301

Query: 314 ----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSSMQG 373
                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    QS +  
Sbjct: 302 GMVNVPSPQHQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLGQSQIPA 361

Query: 374 IGQIHGQHQMQFS------------QPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNR 433
           +  +HGQ Q +F                    FQ RQ+S GH+QH ++Q QL     MNR
Sbjct: 362 LHDMHGQAQQKFQXXXXXXXXXXXXXXXXXXXFQARQLSGGHIQHSMSQGQLNPA--MNR 421

Query: 434 HLHQFSGAANSSLFNVAQTTPTSQMILEVNFPPSNML 449
           HL+QFSG ANS+LF  AQ +P+SQMI  ++   S  L
Sbjct: 422 HLNQFSGGANSALFTSAQGSPSSQMIPNMSSMQSQTL 441

[Close]

BLAST of CsGy3G026160 vs. TrEMBL
Match: tr|A0A1S3CN44|A0A1S3CN44_CUCME (mediator of RNA polymerase II transcription subunit 8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502790 PE=4 SV=1)

HSP 1 Score: 718.8 bits (1854), Expect = 8.4e-204
Identity = 424/441 (96.15%), Postives = 426/441 (96.60%), Query Frame = 0


Query: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60
           MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF
Sbjct: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60

Query: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
           DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120

Query: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
           SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180

Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN 240
           FGMRQGPAI PTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQIT TLPMHLIDVLN
Sbjct: 181 FGMRQGPAITPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLN 240

Query: 241 AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNS 300
           AGDGVQSFNETSGMYAKSTPLTS NISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNS
Sbjct: 241 AGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDNS 300

Query: 301 TSPMPYANSPRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSS 360
           TSPMPYANSPRSS      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 301 TSPMPYANSPRSSANIMNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 MQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAA 420
            QGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAA
Sbjct: 361 XQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAA 420

Query: 421 NSSLFNVAQTTPTSQMILEVN 442
           NSSLFNVAQTTPTSQMI  ++
Sbjct: 421 NSSLFNVAQTTPTSQMIPNIS 441

[Close]

BLAST of CsGy3G026160 vs. TrEMBL
Match: tr|A0A1S3CPL4|A0A1S3CPL4_CUCME (mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502790 PE=4 SV=1)

HSP 1 Score: 714.1 bits (1842), Expect = 2.1e-202
Identity = 424/442 (95.93%), Postives = 426/442 (96.38%), Query Frame = 0


Query: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60
           MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF
Sbjct: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60

Query: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
           DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120

Query: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
           SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180

Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN 240
           FGMRQGPAI PTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQIT TLPMHLIDVLN
Sbjct: 181 FGMRQGPAITPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLN 240

Query: 241 AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVI-QPPGSQLVGRSAASPSGATSATSFDN 300
           AGDGVQSFNETSGMYAKSTPLTS NISSQGAVI QPPGSQLVGRSAASPSGATSATSFDN
Sbjct: 241 AGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN 300

Query: 301 STSPMPYANSPRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQS 360
           STSPMPYANSPRSS      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 301 STSPMPYANSPRSSANIMNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 SMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGA 420
             QGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGA
Sbjct: 361 XXQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGA 420

Query: 421 ANSSLFNVAQTTPTSQMILEVN 442
           ANSSLFNVAQTTPTSQMI  ++
Sbjct: 421 ANSSLFNVAQTTPTSQMIPNIS 442

[Close]

BLAST of CsGy3G026160 vs. TrEMBL
Match: tr|A0A0A0L8Z2|A0A0A0L8Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G640620 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.6e-146
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60
           MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF
Sbjct: 1   MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60

Query: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
           DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61  DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120

Query: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
           SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180

Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN 240
           FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLN 240

Query: 241 AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQ 275
           AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQ
Sbjct: 241 AGDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQ 274

[Close]

BLAST of CsGy3G026160 vs. TrEMBL
Match: tr|A0A2P5SF33|A0A2P5SF33_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD05373 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 3.0e-145
Identity = 293/479 (61.17%), Postives = 346/479 (72.23%), Query Frame = 0


Query: 4   IDGAVQ--NQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFD 63
           ++G +Q  +QP  Q     Q VV AERLNQA+QQQLNLE++K RA +LFKAI+RILEDFD
Sbjct: 1   MEGMIQDPSQPASQPQQQNQAVVGAERLNQALQQQLNLESVKTRAISLFKAITRILEDFD 60

Query: 64  VYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSS 123
            Y RTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNA+N+ ILPVMLSS
Sbjct: 61  AYSRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNADNAPILPVMLSS 120

Query: 124 KLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCF 183
           KLLPEMEV+DN KREQLLLGM N+P+ +QI+KLK RI+MI AACESAEK+LA+TRKAYCF
Sbjct: 121 KLLPEMEVEDNLKREQLLLGMQNLPIPSQIDKLKARIDMIAAACESAEKVLADTRKAYCF 180

Query: 184 GMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLNA 243
           G RQGPAI PTLDK QAAKIQEQENLLR AVNFGEGLRLP +Q+ ITP+LP+HL+D++ A
Sbjct: 181 GSRQGPAILPTLDKGQAAKIQEQENLLRTAVNFGEGLRLPADQKLITPSLPLHLVDIMPA 240

Query: 244 GDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDN-S 303
            DGVQSF + SGMY K+TPL  NNI SQG+++Q  G+QL+GRSAASPS ATSATS+DN +
Sbjct: 241 ADGVQSFADPSGMYMKNTPLMPNNIGSQGSLLQATGAQLIGRSAASPSAATSATSYDNTT 300

Query: 304 TSPMPYANSPR-SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQS 363
           TSP+PYANSP                                                ++
Sbjct: 301 TSPLPYANSPSFCEAIRVTRDISTSICTYASITHFHCTEKILQDLQPPPEITTIVNYYEA 360

Query: 364 SMQGIG-------QIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRH 423
              G+        Q+HG  QMQFS+PL HQQFQGRQ+  GHVQHGI QSQL QGNQ++RH
Sbjct: 361 ERVGVAWGGGVLMQLHG--QMQFSEPLGHQQFQGRQLPPGHVQHGIGQSQLNQGNQLSRH 420

Query: 424 LHQFSGAANSSLFNVAQTTPTSQMILEVNFPPSNMLFQGVKLLPTAYEEKTTLTLVLTS 472
           L QFS AAN++LFN AQ TP++QMI     P  +       LLP   E  + +  + T+
Sbjct: 421 LGQFSSAANTALFNAAQGTPSTQMI-----PNMSATMSSQSLLPRMQEHDSLVLEIYTN 472

[Close]

BLAST of CsGy3G026160 vs. TrEMBL
Match: tr|A0A1U8PD63|A0A1U8PD63_GOSHI (mediator of RNA polymerase II transcription subunit 8-like OS=Gossypium hirsutum OX=3635 GN=LOC107958004 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 8.3e-143
Identity = 332/461 (72.02%), Postives = 376/461 (81.56%), Query Frame = 0


Query: 4   IDGAVQ--NQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFD 63
           ++G +Q  +QP  Q     Q VV AERLNQA+QQQLNLE++K RA +LFKAI+RILEDFD
Sbjct: 1   MEGMIQDPSQPASQPQQQNQAVVGAERLNQALQQQLNLESVKTRAISLFKAITRILEDFD 60

Query: 64  VYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSS 123
            Y RTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNA+N+ ILPVMLSS
Sbjct: 61  AYSRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNADNAPILPVMLSS 120

Query: 124 KLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCF 183
           KLLPEMEV+DN KREQLLLGM N+P+ +QI+KLK RI+MI AACESAEK+LA+TRKAYCF
Sbjct: 121 KLLPEMEVEDNLKREQLLLGMQNLPIPSQIDKLKARIDMIAAACESAEKVLADTRKAYCF 180

Query: 184 GMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLNA 243
           G RQGPAI PTL+K QAAKIQEQENLLR AVNFGEGLRLP +Q+ ITP+LP+HL+D++ A
Sbjct: 181 GSRQGPAILPTLEKGQAAKIQEQENLLRTAVNFGEGLRLPADQKLITPSLPLHLVDIMPA 240

Query: 244 GDGVQSFNETSGMYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDN-S 303
            DGVQSF + SGMY K+TPL SNNI SQG ++Q  G+QL+GRSAASPS ATSATS+DN +
Sbjct: 241 TDGVQSFADPSGMYMKNTPLMSNNIGSQGTLLQATGAQLIGRSAASPSAATSATSYDNTT 300

Query: 304 TSPMPYANSPRSS------------------------XXXXXXXXXXXXXXXXXXXXXXX 363
           TSP+PYANSPRS+                        XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 TSPLPYANSPRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 364 XXXXXXXXXXXXXXXXXXXXXQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQH 423
           XXXXXXXXXXXXXXXXXXXXX          HG  QMQFSQPL HQQFQGRQ+  GHVQH
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHG--QMQFSQPLGHQQFQGRQLPPGHVQH 420

Query: 424 GITQSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQMI 438
           GI QSQL QGNQ++RHL QFS AAN++LFN AQ TP++QMI
Sbjct: 421 GIGQSQLNQGNQLSRHLGQFSSAANTALFNAAQGTPSTQMI 459

The following BLAST results are available for this feature:

BLAST of CsGy3G026160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144418.1	2.9e-208	99.09	PREDICTED: mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cuc...	[more]
XP_011651696.1	7.2e-207	98.64	PREDICTED: mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cuc...	[more]
XP_008465098.1	1.3e-203	96.15	PREDICTED: mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cuc...	[more]
XP_008465097.1	3.1e-202	95.93	PREDICTED: mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cuc...	[more]
XP_022956013.1	3.6e-166	83.48	mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucurbita mosc...	[more]

BLAST of CsGy3G026160 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03070.1	1.3e-106	59.08	mediator subunit 8	[more]

BLAST of CsGy3G026160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q4V3C1\|MED8_ARATH	2.4e-105	59.08	Mediator of RNA polymerase II transcription subunit 8 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsGy3G026160 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CN44\|A0A1S3CN44_CUCME	8.4e-204	96.15	mediator of RNA polymerase II transcription subunit 8 isoform X2 OS=Cucumis melo...	[more]
tr\|A0A1S3CPL4\|A0A1S3CPL4_CUCME	2.1e-202	95.93	mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucumis melo...	[more]
tr\|A0A0A0L8Z2\|A0A0A0L8Z2_CUCSA	1.6e-146	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G640620 PE=4 SV=1	[more]
tr\|A0A2P5SF33\|A0A2P5SF33_GOSBA	3.0e-145	61.17	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD05373 PE=4 SV...	[more]
tr\|A0A1U8PD63\|A0A1U8PD63_GOSHI	8.3e-143	72.02	mediator of RNA polymerase II transcription subunit 8-like OS=Gossypium hirsutum...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016592	mediator complex

Vocabulary: **INTERPRO**
Term	Definition
IPR038795	MED8_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G026160.1	CsGy3G026160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..340
IPR038795	Mediator of RNA polymerase II transcription subunit 8, plant	PANTHER	PTHR35552	FAMILY NOT NAMED	coord: 6..440

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G026160	MELO3C026710	Melon (DHL92) v3.5.1	cgybmeB173
CsGy3G026160	CmaCh14G011860	Cucurbita maxima (Rimu)	cgybcmaB310
CsGy3G026160	Lsi07G006760	Bottle gourd (USVL1VR-Ls)	cgyblsiB220
CsGy3G026160	Cp4.1LG03g15010	Cucurbita pepo (Zucchini)	cgybcpeB398
CsGy3G026160	MELO3C026710.2	Melon (DHL92) v3.6.1	cgybmedB174

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G026160	Cucurbita moschata (Rifu)	cgybcmoB283
CsGy3G026160	Cucumber (Chinese Long) v2	cgybcuB111
CsGy3G026160	Watermelon (Charleston Gray)	cgybwcgB235
CsGy3G026160	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G026160	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G026160	Watermelon (97103) v2	cgybwmbB228
CsGy3G026160	Wax gourd	cgybwgoB266