CsGy3G022270 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G022270
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionCRS2-associated factor 2, mitochondrial
LocationChr3 : 20684115 .. 20685917 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATTCATTTCCGAACACGAATCAGATTTCCAGATCACTCGAACCACAAACCCAGTGGCTATTTCTTCTTCATTTCCCGGTTCATTTCCAAATCTCTGTCTGAAAGCACTTACGATCCTCCATTTTCTCCGGTTTCCAAGCTCCAAAAGGCAAAAAAGAAGAAGGAAAAGGCCCACGGTGGAAATTCGAATTCAAACGAAAACCCTACTCTCCCTCTCAAGTCCTATCTTCCTTTCGACTTCTTCTACTCCTACTCTGAGACCAATCCCTTAGTTAGCCCTATAGGATATCGAGAATCGCCCAAATTCTCGCCCTTTGGACCGGGCCGCCTCGACCGGAAATGGACGGGAACTTCGGCTCCTTCAGCGGTGGAAGTGAATATAAATGAAGTGTTAGAAGAGAGGAAACGGATTCTTGGAGACCCATTATTGGATGAGGAAGTTGCAGAGCTTGTGGAACAGTATCGGCATAGCGATTGTTCTCGCCAAATCAATCTTGGTAAGTACTAAATTACTTTTACAAATCAAGGCCTTCCAATTGAGAGATCAATTCTTCTATGCTATGAGAACTTGAATTCATGTTAAAGGTGGAAATTTTGTCGTAGCTGTATGATTGAATCCCTTTTCCTTGTGTATTAATGGCATTCTATAGTATTGTTCTTGTCTGTCAACTCGTGATCATAAACTGCTGCTCAGAATGTTTTTTTTGAGATTGAGAAAAAAGGAATAAAGGGTTTGAGTGATTGGTTATACATTTGGCTCAAATAGGAAAGGGGGGAGTTACCCATAATATGTTGGATGACATCCACAACCATTGGAAAAGGGCGGAAGCTGTGAGGATCAAATGCTTGGGAGTCCCAACTCTTGATATGGACAATATATGCTTCCACCTTGAGGTTTGATTTGTTTGAACTTCATCCATTAACATAATCTTGTCTTGTCTACTTTCACTTGGAAAATGTTTGATGTGAGCTATAGTTTCTTTATAGGACAAGTCTGGTGGGAAGATTATTTATCGACATATCAACATCCTCCTTTTATACCGTGGTCGGAACTACGATCCCAAGAATCGGCCAGCTATCCCGCTTATGTTGTGGAAACCTTATGCACCAATATATCCAAAGCTTGTGAAGAATGTGGCAGATGACTTGTCATTTGATGAAACAAAGGAAATGAGAAGCAGAGGATTGAATTCTCCTCCTCTAATGAAACTTAGTGAGTAAACTCCTGTGAACTATTCTTTTTCTTTTATATTATAGCAAAAATTACATATATATTCTTTATGGTTGAAACTTTGTTTAATTTACCCCTTCTTAAGATTTCATTGTTGTCCTTTGCGATCCTTGTGCTGATGCTCAGGTTGAATACAATATTTATATATTTACAAAATTTTATGTGTTTGAGATATGAATAGTAAGATGGTTTTTGTAATTTTATGAGGCTGAACTTTACCTTTATACGTATTTTCTAGCAAGGAATGGCGTATATGTTAACGTCGTAGACAGAGTCAGAGAAGCCTTCAAGTTCGAGGAGGTGGTTAGACTAGATTGCACTCATGTTGGTAGCAGTGACTGCAAACAGATAGGCGTTAAATTAAGGGTAACTATTAGTGCTATATTTGTTTCCTATTTAAAGATTAATTCATAGAACTTCGGTCGAAGTTGATTGGAAACTTTCAATCCTAAATTTTCTCGGCCTACAATCCAGGATTTGGTACCTTGTGTTCCCATTTTATTCAAGAACGAGCAGATTATTCTGTGGAGAGGGAAAAAAGATCATGAAGAGGACATGAACTCATAG

mRNA sequence

ATGGCGATTCATTTCCGAACACGAATCAGATTTCCAGATCACTCGAACCACAAACCCAGTGGCTATTTCTTCTTCATTTCCCGGTTCATTTCCAAATCTCTGTCTGAAAGCACTTACGATCCTCCATTTTCTCCGGTTTCCAAGCTCCAAAAGGCAAAAAAGAAGAAGGAAAAGGCCCACGGTGGAAATTCGAATTCAAACGAAAACCCTACTCTCCCTCTCAAGTCCTATCTTCCTTTCGACTTCTTCTACTCCTACTCTGAGACCAATCCCTTAGTTAGCCCTATAGGATATCGAGAATCGCCCAAATTCTCGCCCTTTGGACCGGGCCGCCTCGACCGGAAATGGACGGGAACTTCGGCTCCTTCAGCGGTGGAAGTGAATATAAATGAAGTGTTAGAAGAGAGGAAACGGATTCTTGGAGACCCATTATTGGATGAGGAAGTTGCAGAGCTTGTGGAACAGTATCGGCATAGCGATTGTTCTCGCCAAATCAATCTTGGAAAGGGGGGAGTTACCCATAATATGTTGGATGACATCCACAACCATTGGAAAAGGGCGGAAGCTGTGAGGATCAAATGCTTGGGAGTCCCAACTCTTGATATGGACAATATATGCTTCCACCTTGAGGACAAGTCTGGTGGGAAGATTATTTATCGACATATCAACATCCTCCTTTTATACCGTGGTCGGAACTACGATCCCAAGAATCGGCCAGCTATCCCGCTTATGTTGTGGAAACCTTATGCACCAATATATCCAAAGCTTGTGAAGAATGTGGCAGATGACTTGTCATTTGATGAAACAAAGGAAATGAGAAGCAGAGGATTGAATTCTCCTCCTCTAATGAAACTTACAAGGAATGGCGTATATGTTAACGTCGTAGACAGAGTCAGAGAAGCCTTCAAGTTCGAGGAGGTGGTTAGACTAGATTGCACTCATGTTGGTAGCAGTGACTGCAAACAGATAGGCGTTAAATTAAGGGATTTGGTACCTTGTGTTCCCATTTTATTCAAGAACGAGCAGATTATTCTGTGGAGAGGGAAAAAAGATCATGAAGAGGACATGAACTCATAG

Coding sequence (CDS)

ATGGCGATTCATTTCCGAACACGAATCAGATTTCCAGATCACTCGAACCACAAACCCAGTGGCTATTTCTTCTTCATTTCCCGGTTCATTTCCAAATCTCTGTCTGAAAGCACTTACGATCCTCCATTTTCTCCGGTTTCCAAGCTCCAAAAGGCAAAAAAGAAGAAGGAAAAGGCCCACGGTGGAAATTCGAATTCAAACGAAAACCCTACTCTCCCTCTCAAGTCCTATCTTCCTTTCGACTTCTTCTACTCCTACTCTGAGACCAATCCCTTAGTTAGCCCTATAGGATATCGAGAATCGCCCAAATTCTCGCCCTTTGGACCGGGCCGCCTCGACCGGAAATGGACGGGAACTTCGGCTCCTTCAGCGGTGGAAGTGAATATAAATGAAGTGTTAGAAGAGAGGAAACGGATTCTTGGAGACCCATTATTGGATGAGGAAGTTGCAGAGCTTGTGGAACAGTATCGGCATAGCGATTGTTCTCGCCAAATCAATCTTGGAAAGGGGGGAGTTACCCATAATATGTTGGATGACATCCACAACCATTGGAAAAGGGCGGAAGCTGTGAGGATCAAATGCTTGGGAGTCCCAACTCTTGATATGGACAATATATGCTTCCACCTTGAGGACAAGTCTGGTGGGAAGATTATTTATCGACATATCAACATCCTCCTTTTATACCGTGGTCGGAACTACGATCCCAAGAATCGGCCAGCTATCCCGCTTATGTTGTGGAAACCTTATGCACCAATATATCCAAAGCTTGTGAAGAATGTGGCAGATGACTTGTCATTTGATGAAACAAAGGAAATGAGAAGCAGAGGATTGAATTCTCCTCCTCTAATGAAACTTACAAGGAATGGCGTATATGTTAACGTCGTAGACAGAGTCAGAGAAGCCTTCAAGTTCGAGGAGGTGGTTAGACTAGATTGCACTCATGTTGGTAGCAGTGACTGCAAACAGATAGGCGTTAAATTAAGGGATTTGGTACCTTGTGTTCCCATTTTATTCAAGAACGAGCAGATTATTCTGTGGAGAGGGAAAAAAGATCATGAAGAGGACATGAACTCATAG

Protein sequence

MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKAKKKKEKAHGGNSNSNENPTLPLKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTSAPSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVREAFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS
Homology
[Close]
BLAST of CsGy3G022270 vs. NCBI nr
Match: XP_004151957.1 (PREDICTED: CRS2-associated factor 2, mitochondrial [Cucumis sativus] >KGN57976.1 hypothetical protein Csa_3G417680 [Cucumis sativus])

HSP 1 Score: 693.7 bits (1789), Expect = 3.2e-196
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0 

Query: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXX 60
           MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXX
Sbjct: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS 120
           XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS
Sbjct: 61  XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS 120

Query: 121 APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180
           APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI
Sbjct: 121 APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180

Query: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA 240
           HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA
Sbjct: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA 240

Query: 241 IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300
           IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE
Sbjct: 241 IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300

Query: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS 359
           AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS
Sbjct: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS 358

[Close]
BLAST of CsGy3G022270 vs. NCBI nr
Match: XP_008454555.1 (PREDICTED: CRS2-associated factor 2, mitochondrial [Cucumis melo])

HSP 1 Score: 671.4 bits (1731), Expect = 1.7e-189
Identity = 349/358 (97.49%), Postives = 353/358 (98.60%), Query Frame = 0 

Query: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXX 60
           MAIHFRTRIRFPD SN KPSGYFFFISRFISKSLSESTYDPPFSPVSKLQK XXXXXXXX
Sbjct: 1   MAIHFRTRIRFPDRSNQKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQK-XXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS 120
           XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLV+PIGYRESPKFSPFGPGRLDRKWTGTS
Sbjct: 61  XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVNPIGYRESPKFSPFGPGRLDRKWTGTS 120

Query: 121 APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180
           APSAVEVNINEVLEERKRILGDPL DEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI
Sbjct: 121 APSAVEVNINEVLEERKRILGDPLSDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180

Query: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA 240
           HNHWKRAEAVRIKCLGVPTLDM+NICFHLEDKSGGKIIYR+INILLLYRGRNYDPKNRPA
Sbjct: 181 HNHWKRAEAVRIKCLGVPTLDMENICFHLEDKSGGKIIYRYINILLLYRGRNYDPKNRPA 240

Query: 241 IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300
           IPLMLWKPYAPIYPKLVKNVAD LSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE
Sbjct: 241 IPLMLWKPYAPIYPKLVKNVADGLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300

Query: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS 359
           AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFK+EQIILWRGKKDHEEDMNS
Sbjct: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEEDMNS 357

[Close]
BLAST of CsGy3G022270 vs. NCBI nr
Match: XP_023535436.1 (CRS2-associated factor 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 619.4 bits (1596), Expect = 7.7e-174
Identity = 300/358 (83.80%), Postives = 315/358 (87.99%), Query Frame = 0 

Query: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXX 60
           MAIHFRTRIRFPDHSN K SGYF  I RF SKSLSE+ YDPPFSPVSKLQK         
Sbjct: 1   MAIHFRTRIRFPDHSNQKSSGYFLLICRFFSKSLSETPYDPPFSPVSKLQK--AKKKKIQ 60

Query: 61  XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS 120
                          S LPFDFFYSYSETNP V+PIGYRESPKFSPFGPGRLDRKWTGTS
Sbjct: 61  DGNSNSIKNSTLPLHSDLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTS 120

Query: 121 APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180
           APS VEV INEVLEERKRILGDPL +EEVAELVEQYRH++CSRQINLGKGGVTHNMLDDI
Sbjct: 121 APSEVEVKINEVLEERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDI 180

Query: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA 240
           HNHW+R EAVRIKCLGVPTLDM+NICFHLEDKSGGKIIYRHINILLLYRGRNYDP+NRP 
Sbjct: 181 HNHWRRGEAVRIKCLGVPTLDMNNICFHLEDKSGGKIIYRHINILLLYRGRNYDPENRPT 240

Query: 241 IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300
           IPLMLWKPYAPIYPKLVKNVAD LSF+ETKEMR RGLNSPPLMKLTRNGVYVNVV+RVRE
Sbjct: 241 IPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRGRGLNSPPLMKLTRNGVYVNVVERVRE 300

Query: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS 359
           AF FEEVVRLDCTHVGSSDCK+IG+KLRDLVPCVPILFK+EQIILWRGK+D EE +NS
Sbjct: 301 AFGFEEVVRLDCTHVGSSDCKRIGLKLRDLVPCVPILFKDEQIILWRGKRDPEEGVNS 356

[Close]
BLAST of CsGy3G022270 vs. NCBI nr
Match: XP_022976536.1 (CRS2-associated factor 2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 617.8 bits (1592), Expect = 2.2e-173
Identity = 301/358 (84.08%), Postives = 313/358 (87.43%), Query Frame = 0 

Query: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXX 60
           MAIH RTRIRFPDH N K SGYF  I RF SKSLSE  YDPPFSPVSKLQK         
Sbjct: 1   MAIHLRTRIRFPDHLNQKSSGYFLSICRFFSKSLSEIPYDPPFSPVSKLQK--AKKKKIQ 60

Query: 61  XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS 120
                          S LPFDFFYSYSETNP V+PIGYRESPKFSPFGPGRLDRKWTGTS
Sbjct: 61  DGNSNSIKNPTLPLHSDLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTS 120

Query: 121 APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180
           APS VEV INEVLEERKRILGDPL +EEVAELVEQYRH++CSRQINLGKGGVTHNMLDDI
Sbjct: 121 APSEVEVKINEVLEERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDI 180

Query: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA 240
           HNHW+RAEAVRIKCLGVPTLDM+NICFHLEDKSGGKIIYRHINILLLYRGRNYDP+NRP 
Sbjct: 181 HNHWRRAEAVRIKCLGVPTLDMNNICFHLEDKSGGKIIYRHINILLLYRGRNYDPENRPT 240

Query: 241 IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300
           IPLMLWKPYAPIYPKLVKNVAD LSF+ETKEMR RGLNSPPLMKLTRNGVYVNVV+RVRE
Sbjct: 241 IPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRGRGLNSPPLMKLTRNGVYVNVVERVRE 300

Query: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS 359
           AF FEEVVRLDCTHVGSSDCK+IGVKL DLVPCVPILFK+EQIILWRGKKD EED+NS
Sbjct: 301 AFGFEEVVRLDCTHVGSSDCKRIGVKLMDLVPCVPILFKDEQIILWRGKKDREEDVNS 356

[Close]
BLAST of CsGy3G022270 vs. NCBI nr
Match: XP_022936437.1 (CRS2-associated factor 2, mitochondrial [Cucurbita moschata])

HSP 1 Score: 616.3 bits (1588), Expect = 6.5e-173
Identity = 299/358 (83.52%), Postives = 314/358 (87.71%), Query Frame = 0 

Query: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXX 60
           MAIHFRTRIR PDHSN K SGYF  I R  SKSLSE+ YDPPFSPVSKLQK         
Sbjct: 1   MAIHFRTRIRLPDHSNRKYSGYFLSICRIFSKSLSETPYDPPFSPVSKLQK--AKKKKIQ 60

Query: 61  XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS 120
                          S LPFDFFYSYSETNP V+PIGYRESPKFSPFGPGRLDRKWTGTS
Sbjct: 61  DGNSNSIKNSTLPLHSDLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTS 120

Query: 121 APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180
           APS VEV INEVLEERKRILGDPL +EEVAE+VEQYRH++CSRQINLGKGGVTHN+LDDI
Sbjct: 121 APSEVEVKINEVLEERKRILGDPLSEEEVAEIVEQYRHNNCSRQINLGKGGVTHNILDDI 180

Query: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA 240
           HNHW+RAEAVRIKCLGVPTLDM+NICFHLEDKSGGKIIYRHINILLLYRGRNYDP NRP 
Sbjct: 181 HNHWRRAEAVRIKCLGVPTLDMNNICFHLEDKSGGKIIYRHINILLLYRGRNYDPANRPT 240

Query: 241 IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300
           IPLMLWKPYAPIYPKLVKNVAD LSF+ETKEMR RGLNSPPLMKLTRNGVYVNVV+RVRE
Sbjct: 241 IPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRGRGLNSPPLMKLTRNGVYVNVVERVRE 300

Query: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS 359
           AF FEEVVRLDCTHVGSSDCK+IGVKLRDLVPCVPILFK+EQIILWRGK+D EED+NS
Sbjct: 301 AFGFEEVVRLDCTHVGSSDCKRIGVKLRDLVPCVPILFKDEQIILWRGKRDREEDVNS 356

[Close]
BLAST of CsGy3G022270 vs. TAIR10
Match: AT5G54890.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 481.9 bits (1239), Expect = 3.5e-136
Identity = 242/343 (70.55%), Postives = 287/343 (83.67%), Query Frame = 0 

Query: 18  KPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXXXXXXXXXXXXXXXXK-- 77
           +P   F F+    ++ +S   YDPPF        XXXXXXXXXXXXXXXX       K  
Sbjct: 13  EPKDLFLFLCNLRARCVSTDDYDPPFXXXXXXXXXXXXXXXXXXXXXXXXSELVNDLKIP 72

Query: 78  --SYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTSAPSAVEVNINEVL 137
             S LPFDF YSYSETNP + PIG+RE  +FSPFGPGRLDRKWTGT+A ++ E++ ++ +
Sbjct: 73  VISDLPFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALASPEIDQSQWV 132

Query: 138 EERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIK 197
           EER R+LG+ L ++EV EL+E+YRHSDC+RQINLGKGGVTHNM+DDIHNHWK+AEAVRIK
Sbjct: 133 EERARVLGETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIK 192

Query: 198 CLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPAIPLMLWKPYAPIY 257
           CLGVPTLDMDNICFHLE+KSGGKI+YR+INIL+LYRGRNYDPK+RP IPLMLWKP+ PIY
Sbjct: 193 CLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIY 252

Query: 258 PKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVREAFKFEEVVRLDCT 317
           P+LVKNVAD L F+ETKEMR+RGL+SP LMKLTRNGVYVNVV RVRE F+ EE+VRLDCT
Sbjct: 253 PRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCT 312

Query: 318 HVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDM 357
           HVG SDCK+IGVKL+++VPCVPILFK+EQIILWRGK+  EE++
Sbjct: 313 HVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGKRTGEEEL 355

[Close]
BLAST of CsGy3G022270 vs. TAIR10
Match: AT4G31010.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 326.6 bits (836), Expect = 1.9e-89
Identity = 161/294 (54.76%), Postives = 205/294 (69.73%), Query Frame = 0 

Query: 76  SYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTSAPSAVEVNINEV--- 135
           S LPFDF +SY+E+   V PIG RE PK+SPFGP RLDR+WTG  AP AV   +  V   
Sbjct: 81  SDLPFDFRFSYTESCSNVRPIGLRE-PKYSPFGPDRLDREWTGVCAP-AVNPKVESVDGV 140

Query: 136 ----LEERKR-----ILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDIHNH 195
               LEE++R     I G  L + E   LVE  + +   RQ+NLG+ G+THNML+D++NH
Sbjct: 141 EDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNH 200

Query: 196 WKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPAIPL 255
           WK AEAVR+KCLGVPTLDM N+ FHLEDK+ G+++ +H   L+LYRGRNYDPK RP IPL
Sbjct: 201 WKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPL 260

Query: 256 MLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVREAFK 315
           MLWKP+ P+YP+L+K   D LS DETK MR +GL  P L KL +NG Y ++V  VR+AF 
Sbjct: 261 MLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFL 320

Query: 316 FEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGK--KDHEED 356
             E+VR+DC  +   D K+IG KLRDLVPC+ + F  EQ+++WRGK  K  +ED
Sbjct: 321 VSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPPKED 372

[Close]
BLAST of CsGy3G022270 vs. TAIR10
Match: AT2G20020.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 268.5 bits (685), Expect = 6.1e-72
Identity = 134/302 (44.37%), Postives = 190/302 (62.91%), Query Frame = 0 

Query: 79  PFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS----------------AP 138
           PF+F YSY+ET P V P+  RE P ++PFGP  + R WTG +                 P
Sbjct: 150 PFEFKYSYTET-PKVKPLKLRE-PAYAPFGPTTMGRPWTGRAPLPQSQKTPREFDSFRLP 209

Query: 139 SAVEVNINEV--------------LEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLG 198
              +  +  V              +  ++ ILG+PL  EEV ELV     +  +RQ+N+G
Sbjct: 210 PVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEEVRELVTSCLKT--TRQLNMG 269

Query: 199 KGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLY 258
           + G+THNML++IH+ WKR    +IKC GV T+DMDN+C  LE+K GGK+IYR   +L L+
Sbjct: 270 RDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLF 329

Query: 259 RGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRN 318
           RGRNY+ + RP  PLMLWKP AP+YP+L++ V + L+  E   MR +G    P+ KL +N
Sbjct: 330 RGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGKN 389

Query: 319 GVYVNVVDRVREAFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRG 351
           GVY ++V  V+EAF+  E+VR+DC  +  SD ++IG KL+DLVPCV + F+NEQI++WRG
Sbjct: 390 GVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRG 447

[Close]
BLAST of CsGy3G022270 vs. TAIR10
Match: AT1G23400.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 262.3 bits (669), Expect = 4.3e-70
Identity = 130/302 (43.05%), Postives = 191/302 (63.25%), Query Frame = 0 

Query: 79  PFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGT----------------SAP 138
           PF+F +SYSET P V P+G RE P F PF P  + R WTG                 + P
Sbjct: 110 PFEFQFSYSET-PKVKPVGIRE-PAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPP 169

Query: 139 SAVEVNINEVL--------------EERKRILGDPLLDEEVAELVEQYRHSDCSRQINLG 198
            A +  +  V                 R+ +LG+PL   E   L++ + H   +RQ+NLG
Sbjct: 170 PAGKSGVKYVEMPGPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHD--NRQVNLG 229

Query: 199 KGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLY 258
           + G THNML+ IH+HWKR    +++C GVPT+DM+N+C  LE+K+GG+II+R   ++ L+
Sbjct: 230 RDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLF 289

Query: 259 RGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRN 318
           RGRNY+ + RP  PLMLWKP AP+YPKL++ V + L+ +E  E R +G +  P+ KL++N
Sbjct: 290 RGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKN 349

Query: 319 GVYVNVVDRVREAFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRG 351
           GVYV++V  VR+AF+   +V++DC  +  SD K+IG KL++LVPCV + F +EQI++WRG
Sbjct: 350 GVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRG 407

[Close]
BLAST of CsGy3G022270 vs. TAIR10
Match: AT3G01370.1 (CRM family member 2)

HSP 1 Score: 63.2 bits (152), Expect = 3.9e-10
Identity = 26/72 (36.11%), Postives = 45/72 (62.50%), Query Frame = 0 

Query: 162 SRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRH 221
           ++++ +GK G+T  +++ IH  W+  E V+I C  +  ++M      LE K+GG +I+R 
Sbjct: 182 TKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVIWRS 241

Query: 222 INILLLYRGRNY 234
            + +LLYRG NY
Sbjct: 242 GSKILLYRGVNY 253

[Close]
BLAST of CsGy3G022270 vs. Swiss-Prot
Match: sp|Q9FFU1|CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 6.3e-135
Identity = 242/343 (70.55%), Postives = 287/343 (83.67%), Query Frame = 0 

Query: 18  KPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXXXXXXXXXXXXXXXXK-- 77
           +P   F F+    ++ +S   YDPPF        XXXXXXXXXXXXXXXX       K  
Sbjct: 13  EPKDLFLFLCNLRARCVSTDDYDPPFXXXXXXXXXXXXXXXXXXXXXXXXSELVNDLKIP 72

Query: 78  --SYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTSAPSAVEVNINEVL 137
             S LPFDF YSYSETNP + PIG+RE  +FSPFGPGRLDRKWTGT+A ++ E++ ++ +
Sbjct: 73  VISDLPFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALASPEIDQSQWV 132

Query: 138 EERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIK 197
           EER R+LG+ L ++EV EL+E+YRHSDC+RQINLGKGGVTHNM+DDIHNHWK+AEAVRIK
Sbjct: 133 EERARVLGETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIK 192

Query: 198 CLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPAIPLMLWKPYAPIY 257
           CLGVPTLDMDNICFHLE+KSGGKI+YR+INIL+LYRGRNYDPK+RP IPLMLWKP+ PIY
Sbjct: 193 CLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIY 252

Query: 258 PKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVREAFKFEEVVRLDCT 317
           P+LVKNVAD L F+ETKEMR+RGL+SP LMKLTRNGVYVNVV RVRE F+ EE+VRLDCT
Sbjct: 253 PRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCT 312

Query: 318 HVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDM 357
           HVG SDCK+IGVKL+++VPCVPILFK+EQIILWRGK+  EE++
Sbjct: 313 HVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGKRTGEEEL 355

[Close]
BLAST of CsGy3G022270 vs. Swiss-Prot
Match: sp|Q0J7J7|CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 463.4 bits (1191), Expect = 2.3e-129
Identity = 215/282 (76.24%), Postives = 243/282 (86.17%), Query Frame = 0 

Query: 76  SYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTSAPSAVEVNINEVLEE 135
           S LPFDF YSYSET+P   PIG+RE  +FSPFGPGRLDR W G +A              
Sbjct: 77  SDLPFDFRYSYSETDPAWRPIGFREPTRFSPFGPGRLDRPWDGVAAAXXXXXXXXXXXTS 136

Query: 136 RKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCL 195
           R+ +LG+PL +EEVA+LVE+YRHSDCSRQINLGKGGVTHNM+DDIHNHWKRAEAVRIKCL
Sbjct: 137 REEVLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCL 196

Query: 196 GVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPAIPLMLWKPYAPIYPK 255
           GVPTLDMDNICFHLEDK+GGK+IYR+INIL+LYRGRNYDPK RP IPLMLWKP APIYP+
Sbjct: 197 GVPTLDMDNICFHLEDKTGGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKPLAPIYPR 256

Query: 256 LVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVREAFKFEEVVRLDCTHV 315
           LV+NVAD L+F++TKE+R+ GLNS PLMKLTRNGVYVNVVDRVREAFK  EVVRLDC+HV
Sbjct: 257 LVQNVADGLTFEKTKELRNTGLNSSPLMKLTRNGVYVNVVDRVREAFKTVEVVRLDCSHV 316

Query: 316 GSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMN 358
           GSSDCK+IGVKLRDLVPCVP+LFK+EQIILWRGK   E  ++
Sbjct: 317 GSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRGKVKQENSVS 358

[Close]
BLAST of CsGy3G022270 vs. Swiss-Prot
Match: sp|Q6Z4U2|CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0174900 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.0e-89
Identity = 161/291 (55.33%), Postives = 206/291 (70.79%), Query Frame = 0 

Query: 75  KSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTSAPS----------- 134
           +S LPFDF +SY+E++P   PIG RE PK+SPFGPGRLDR WTG  AP+           
Sbjct: 73  RSDLPFDFRFSYTESSPGDKPIGLRE-PKYSPFGPGRLDRPWTGLCAPAVDTTLRDAHAD 132

Query: 135 ----AVEVNINEV-LEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLD 194
               A E  + E    ER+R+LG+PL   E A LV + + S   +QINLG+ G+THNML+
Sbjct: 133 DPAPAAERELEEARRRERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLN 192

Query: 195 DIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNR 254
           DIHNHWK  EAVR+KCLGVPT+DM N+C  LEDK+GG II+RH   L+LYRGR+Y+PK R
Sbjct: 193 DIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRGRHYNPKKR 252

Query: 255 PAIPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRV 314
           P IPLMLWKP  P+YP+L+K   + L+ +ETKEMR +GL  P L KL +NG Y ++V  V
Sbjct: 253 PVIPLMLWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPMV 312

Query: 315 REAFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGK 350
           R+AF  +E+VR+D   +  SD ++IGVKLRDLVPC+ + F  EQII+WRGK
Sbjct: 313 RDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGK 362

[Close]
BLAST of CsGy3G022270 vs. Swiss-Prot
Match: sp|Q8VYD9|CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.4e-88
Identity = 161/294 (54.76%), Postives = 205/294 (69.73%), Query Frame = 0 

Query: 76  SYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTSAPSAVEVNINEV--- 135
           S LPFDF +SY+E+   V PIG RE PK+SPFGP RLDR+WTG  AP AV   +  V   
Sbjct: 81  SDLPFDFRFSYTESCSNVRPIGLRE-PKYSPFGPDRLDREWTGVCAP-AVNPKVESVDGV 140

Query: 136 ----LEERKR-----ILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDIHNH 195
               LEE++R     I G  L + E   LVE  + +   RQ+NLG+ G+THNML+D++NH
Sbjct: 141 EDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNH 200

Query: 196 WKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPAIPL 255
           WK AEAVR+KCLGVPTLDM N+ FHLEDK+ G+++ +H   L+LYRGRNYDPK RP IPL
Sbjct: 201 WKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPL 260

Query: 256 MLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVREAFK 315
           MLWKP+ P+YP+L+K   D LS DETK MR +GL  P L KL +NG Y ++V  VR+AF 
Sbjct: 261 MLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFL 320

Query: 316 FEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGK--KDHEED 356
             E+VR+DC  +   D K+IG KLRDLVPC+ + F  EQ+++WRGK  K  +ED
Sbjct: 321 VSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPPKED 372

[Close]
BLAST of CsGy3G022270 vs. Swiss-Prot
Match: sp|Q84N49|CAF1P_MAIZE (CRS2-associated factor 1, chloroplastic OS=Zea mays OX=4577 GN=CAF1 PE=1 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 6.2e-74
Identity = 139/301 (46.18%), Postives = 190/301 (63.12%), Query Frame = 0 

Query: 79  PFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS----------------AP 138
           PF+F YSY+E  P   P+  RE+P F PFGP    R WTG                   P
Sbjct: 91  PFEFQYSYTEA-PRARPVALREAP-FMPFGPEATPRPWTGRKPLPKSRKELPEFDSFVLP 150

Query: 139 SAVEVNINEVLE---------------ERKRILGDPLLDEEVAELVEQYRHSDCSRQINL 198
           +  +  +  V                  R+ ILG+PL  EEV+ELV+    S   RQ+N+
Sbjct: 151 APGKKGVKPVQSPGPFLAGMEPRYQSVSREDILGEPLTKEEVSELVKGSLKS--KRQLNM 210

Query: 199 GKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLL 258
           G+ G+THNML++IH+HWKR    +IKC GV T+DMDNIC  LE+K GGK+I+R   ++ L
Sbjct: 211 GRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMDNICHQLEEKVGGKVIHRQGGVIFL 270

Query: 259 YRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTR 318
           +RGRNY+ + RP  PLMLWKP AP+YP+LV  V   L+ DE  EMR+RG   PP+ KL +
Sbjct: 271 FRGRNYNYRTRPCFPLMLWKPVAPVYPRLVTKVPGGLTPDEATEMRTRGHQLPPICKLGK 330

Query: 319 NGVYVNVVDRVREAFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWR 349
           NGVY N+V++VREAF+  ++VR+DC+ +  SDC++IG KL+DLVPC+ + F+ E I++WR
Sbjct: 331 NGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWR 387

[Close]
BLAST of CsGy3G022270 vs. TrEMBL
Match: tr|A0A0A0LD46|A0A0A0LD46_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G417680 PE=4 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 2.1e-196
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0 

Query: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXX 60
           MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXX
Sbjct: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS 120
           XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS
Sbjct: 61  XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS 120

Query: 121 APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180
           APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI
Sbjct: 121 APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180

Query: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA 240
           HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA
Sbjct: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA 240

Query: 241 IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300
           IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE
Sbjct: 241 IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300

Query: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS 359
           AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS
Sbjct: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS 358

[Close]
BLAST of CsGy3G022270 vs. TrEMBL
Match: tr|A0A1S3BYZ9|A0A1S3BYZ9_CUCME (CRS2-associated factor 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494948 PE=4 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 1.1e-189
Identity = 349/358 (97.49%), Postives = 353/358 (98.60%), Query Frame = 0 

Query: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXX 60
           MAIHFRTRIRFPD SN KPSGYFFFISRFISKSLSESTYDPPFSPVSKLQK XXXXXXXX
Sbjct: 1   MAIHFRTRIRFPDRSNQKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQK-XXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTS 120
           XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLV+PIGYRESPKFSPFGPGRLDRKWTGTS
Sbjct: 61  XXXXXXXXXXXXXXKSYLPFDFFYSYSETNPLVNPIGYRESPKFSPFGPGRLDRKWTGTS 120

Query: 121 APSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180
           APSAVEVNINEVLEERKRILGDPL DEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI
Sbjct: 121 APSAVEVNINEVLEERKRILGDPLSDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDI 180

Query: 181 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPA 240
           HNHWKRAEAVRIKCLGVPTLDM+NICFHLEDKSGGKIIYR+INILLLYRGRNYDPKNRPA
Sbjct: 181 HNHWKRAEAVRIKCLGVPTLDMENICFHLEDKSGGKIIYRYINILLLYRGRNYDPKNRPA 240

Query: 241 IPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300
           IPLMLWKPYAPIYPKLVKNVAD LSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE
Sbjct: 241 IPLMLWKPYAPIYPKLVKNVADGLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVRE 300

Query: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEEDMNS 359
           AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFK+EQIILWRGKKDHEEDMNS
Sbjct: 301 AFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKDEQIILWRGKKDHEEDMNS 357

[Close]
BLAST of CsGy3G022270 vs. TrEMBL
Match: tr|M5X2D1|M5X2D1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G211400 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 3.0e-150
Identity = 260/339 (76.70%), Postives = 293/339 (86.43%), Query Frame = 0 

Query: 19  PSGYFFFISRFISKSLSESTY--DPPFSPVSKLQKXXXXXXXXXXXXXXXXXXXXXXXKS 78
           P+  F  +SRF+S SLSE  Y  DPPFSPVSK  K  XXXXX                KS
Sbjct: 19  PAKPFSSLSRFLSHSLSEDQYEDDPPFSPVSKPPK--XXXXXTQNKDPDTKNEPTRPLKS 78

Query: 79  YLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTSAPSAVEVNINEVLEER 138
            LPFDF YSYSETNP V PI +RESPKFSPFGPGRLDRKWTGT AP+  EV++N V EER
Sbjct: 79  DLPFDFSYSYSETNPKVEPIAFRESPKFSPFGPGRLDRKWTGTVAPTQQEVDLNRVAEER 138

Query: 139 KRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLG 198
            R+LGDPL +EEVA+LVE+YRHSDC+RQIN+GKGGVTHNMLDDIHNHWKRAEAVRIKCLG
Sbjct: 139 IRVLGDPLTEEEVAKLVERYRHSDCARQINMGKGGVTHNMLDDIHNHWKRAEAVRIKCLG 198

Query: 199 VPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKL 258
           VPTLDMDN+CFHLEDKSGGKI+Y+HIN+L+LYRGRNYDPKNRP IP+MLWKPY PIYPKL
Sbjct: 199 VPTLDMDNVCFHLEDKSGGKIVYQHINVLILYRGRNYDPKNRPVIPVMLWKPYTPIYPKL 258

Query: 259 VKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVREAFKFEEVVRLDCTHVG 318
           VKNVAD L+F+ETKE+R+RGLNSPP+MKLTRNGVYVNVVDR+REAFK EEVVRLDCTHVG
Sbjct: 259 VKNVADGLTFEETKELRNRGLNSPPVMKLTRNGVYVNVVDRIREAFKTEEVVRLDCTHVG 318

Query: 319 SSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHEED 356
           +SDCK+IGVKLRDLVPC+P+LFK+EQI+LWRGK+D E+D
Sbjct: 319 TSDCKRIGVKLRDLVPCIPLLFKDEQIVLWRGKRDQEQD 355

[Close]
BLAST of CsGy3G022270 vs. TrEMBL
Match: tr|A0A067KVT7|A0A067KVT7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00865 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 7.2e-144
Identity = 249/338 (73.67%), Postives = 281/338 (83.14%), Query Frame = 0 

Query: 16  NHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXXXXXXXXXXXXXXXXK 75
           N K S + +F  RF+S++LS+  YDPPF+   K +K                       K
Sbjct: 16  NPKYSPFIYFF-RFLSQTLSQDPYDPPFTLACKPKK---TTKEGPQTKENPNKDPKLPQK 75

Query: 76  SYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTSAPSAVEVNINEVLEE 135
           S LPFDF YSYSE+NP V PIGYRE  +FSPFGPGRLDRKWTGT+AP   EV++ +++EE
Sbjct: 76  SDLPFDFRYSYSESNPGVEPIGYREPKRFSPFGPGRLDRKWTGTAAPFQAEVDMEKIMEE 135

Query: 136 RKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCL 195
           R R+LGDPL +EE   LVE+YRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCL
Sbjct: 136 RNRVLGDPLTEEEAEYLVERYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCL 195

Query: 196 GVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPAIPLMLWKPYAPIYPK 255
           GVPTLDMDN+CFHLEDKSGGKIIYRHINILLLYRGRNYDPK+R  IP+MLWKPYAPIYPK
Sbjct: 196 GVPTLDMDNVCFHLEDKSGGKIIYRHINILLLYRGRNYDPKSRTVIPVMLWKPYAPIYPK 255

Query: 256 LVKNVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVREAFKFEEVVRLDCTHV 315
           LVKNVAD L+F+ETKEMR+RGLNSP LMKLTRNGVYVNVV+RVREA + EEVVRLDCTHV
Sbjct: 256 LVKNVADGLTFEETKEMRNRGLNSPALMKLTRNGVYVNVVERVREALRAEEVVRLDCTHV 315

Query: 316 GSSDCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHE 354
           G+SDCK+IGVKLRDLVPCVPILFK+EQIILW+GK+D E
Sbjct: 316 GTSDCKKIGVKLRDLVPCVPILFKDEQIILWKGKRDEE 349

[Close]
BLAST of CsGy3G022270 vs. TrEMBL
Match: tr|A0A2K2CCD8|A0A2K2CCD8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G423800v3 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 2.7e-143
Identity = 243/335 (72.54%), Postives = 280/335 (83.58%), Query Frame = 0 

Query: 19  PSGYFFFISRFISKSLSESTYDPPFSPVSKLQKXXXXXXXXXXXXXXXXXXXXXXXKSYL 78
           P     ++S F++ +LS+  YDPPF   S  +K                       KS L
Sbjct: 17  PKSKSLYVSYFLNHTLSQDQYDPPF---SLTKKPKPKNTTEPKETPDPNNHPKLPVKSDL 76

Query: 79  PFDFFYSYSETNPLVSPIGYRESPKFSPFGPGRLDRKWTGTSAPSAVEVNINEVLEERKR 138
            FDF YSYSE+NP + PIGYRE  +FSPFGPGRLDRKWTGT+AP+ +E ++++++EER R
Sbjct: 77  AFDFRYSYSESNPAIEPIGYREPKRFSPFGPGRLDRKWTGTAAPTQLETDMDKLMEERNR 136

Query: 139 ILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP 198
           +LGDPL +EEVAELVE+YRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP
Sbjct: 137 VLGDPLTEEEVAELVERYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP 196

Query: 199 TLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVK 258
           TLDMDN+CFHLEDKSGGK++YR+INILLLYRGRNYDP+NRP IPLMLWKPYAPIYPKLVK
Sbjct: 197 TLDMDNVCFHLEDKSGGKVVYRNINILLLYRGRNYDPENRPVIPLMLWKPYAPIYPKLVK 256

Query: 259 NVADDLSFDETKEMRSRGLNSPPLMKLTRNGVYVNVVDRVREAFKFEEVVRLDCTHVGSS 318
           NVAD L+F+ETKEMR+RGLNS PLMKLTRNGVYVNVVDRVR+AF+ EEVVRLDC HVG S
Sbjct: 257 NVADGLTFEETKEMRNRGLNSLPLMKLTRNGVYVNVVDRVRDAFETEEVVRLDCKHVGMS 316

Query: 319 DCKQIGVKLRDLVPCVPILFKNEQIILWRGKKDHE 354
           DCK+IGVKL+DLVPCVPILFK+EQIILWRGK++ E
Sbjct: 317 DCKKIGVKLKDLVPCVPILFKDEQIILWRGKRNQE 348

The following BLAST results are available for this feature:
BLAST of CsGy3G022270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004151957.13.2e-196100.00PREDICTED: CRS2-associated factor 2, mitochondrial [Cucumis sativus] >KGN57976.1... [more]
XP_008454555.11.7e-18997.49PREDICTED: CRS2-associated factor 2, mitochondrial [Cucumis melo][more]
XP_023535436.17.7e-17483.80CRS2-associated factor 2, mitochondrial [Cucurbita pepo subsp. pepo][more]
XP_022976536.12.2e-17384.08CRS2-associated factor 2, mitochondrial [Cucurbita maxima][more]
XP_022936437.16.5e-17383.52CRS2-associated factor 2, mitochondrial [Cucurbita moschata][more]
BLAST of CsGy3G022270 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G54890.13.5e-13670.55RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT4G31010.11.9e-8954.76RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT2G20020.16.1e-7244.37RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT1G23400.14.3e-7043.05RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT3G01370.13.9e-1036.11CRM family member 2[more]
BLAST of CsGy3G022270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FFU1|CAF2M_ARATH6.3e-13570.55CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g5... [more]
sp|Q0J7J7|CAF2M_ORYSJ2.3e-12976.24CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947... [more]
sp|Q6Z4U2|CAF1M_ORYSJ1.0e-8955.33CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947... [more]
sp|Q8VYD9|CAF1M_ARATH3.4e-8854.76CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g3... [more]
sp|Q84N49|CAF1P_MAIZE6.2e-7446.18CRS2-associated factor 1, chloroplastic OS=Zea mays OX=4577 GN=CAF1 PE=1 SV=1[more]
BLAST of CsGy3G022270 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LD46|A0A0A0LD46_CUCSA2.1e-196100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G417680 PE=4 SV=1[more]
tr|A0A1S3BYZ9|A0A1S3BYZ9_CUCME1.1e-18997.49CRS2-associated factor 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494948 ... [more]
tr|M5X2D1|M5X2D1_PRUPE3.0e-15076.70Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G211400 PE=4 SV=1[more]
tr|A0A067KVT7|A0A067KVT7_JATCU7.2e-14473.67Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00865 PE=4 SV=1[more]
tr|A0A2K2CCD8|A0A2K2CCD8_POPTR2.7e-14372.54Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G423800v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR035920YhbY_like_sf
IPR001890RNA-binding_CRM
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G022270.1CsGy3G022270.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 264..347
e-value: 2.1E-11
score: 53.9
coord: 144..229
e-value: 2.3E-17
score: 73.7
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 267..347
e-value: 5.9E-12
score: 45.5
coord: 147..229
e-value: 4.3E-18
score: 65.2
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 262..358
score: 15.911
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 142..240
score: 18.059
IPR035920YhbY-like superfamilyGENE3DG3DSA:3.30.110.60coord: 147..243
e-value: 2.3E-6
score: 29.2
IPR035920YhbY-like superfamilySUPERFAMILYSSF75471YhbY-likecoord: 264..352
IPR035920YhbY-like superfamilySUPERFAMILYSSF75471YhbY-likecoord: 146..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..72
NoneNo IPR availablePANTHERPTHR31846:SF3CRS2-ASSOCIATED FACTOR 2, MITOCHONDRIALcoord: 29..356
NoneNo IPR availablePANTHERPTHR31846FAMILY NOT NAMEDcoord: 29..356