CsGy3G021280 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G021280
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr3 : 19186440 .. 19191335 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATGTAATAACGAGGTCTCAGTAGTCAATACCGGTCTGTTTCCGAGTTTGCTTGTGAAGAAAACTTCTGCATCTTTAGTTTCTAAAGAAATAGGGATCCCCAATTCATTGGATGCTTGGATCCAGCAGTCTCTTAGAAAAGCAGCTGAAGTTGTCCTTGATTTGCCTCCACCAATAAGGGCTTCAGTTAAGACAACGGACTCTAATTTTCCACCTGAAAGTCAGTTAACTGCCGACTGTCAGCATTTTATTGTTACATCTCAATCTCACATCATCAAAGTAGACAGATATGAACAAAATTACATGACATTGTATAACATATGGAAAGATGTATAAAATCTCTTGGAAAGTTATTGCTTTGTTTAAATTGCAATCATTTCTAAGATTTGATTGACCATAATCAAAAGACTTTAGAGAATAAACAGCAGGGTTGCCTAGAGGGCTTCAATACTTACACATTAAAAGCTTATCAATGATATCATTTTCCTAAATTATTGATTGATTTTTCTTCTCAGAATACTCGTATTAATTTTGGTGCTCAGTAAGCTCACTTTATTTATATTTTTTCTCTTTACTTTTTGTTTTTCTCTCCCTTGTGAAAGTTTATTTGTTACTTTTCATTACTTCAATTAAAGGTTTTATTTTTTGTTTAAAAAAATGAAGAGCAAAGGTAGAAGATGAAGCATGCAATTTGATGGAGTCCACACCTTATTTTCAGTCTCCTATATGATAAAGAAAGGAAGATAAAATTTTCTCTGTTTTCGTTTGTTAAGCTTCTTTTAACTAAAATTTGAAACTTCAACTAATATTCAAGAACTAAAATGAAATTTTCTAGAACCTATCATAAGTTCACTTGACATAACTGTCGCTAACAGTTTTCTCGCTTATTCACTCTTTAGACATATTTTCTCTTACCAACTTCTCTTAACACACTTTCTTCCAGTCATCTATTTCAATGTGCACACTTTAGCTAATCTATCTCTGCAGACATTCTCATATGATTCAAAAGAACCATGGTTATAAGAACCAGATGTGGCCTATATAATCCAAAAGTTTCAAGAATATCGAAGAATTTACGATCAAGAAGAAATTTCTATGCTGAAGAAAATATGAGACGAACTCTTTGCAGAGGAGAAGGCTTACCTTGAAGGAATTCTCTAGCAAAACCAACGTGATTCTTATCACTGGCCATTGCAACCACAAGAGCCAATTGAGCCTCAGGGAAAGCCATTTGAATGGTATCCAATAATGCTTTAGCAGAGTCTTTGGTATGTGCTGTGAAAACATTCAAGAACCAATTAGAAAACACTGTCTAAAAGAATGCAAGGCATGGCACCAATATCCAGAACAACATAACTCAAATATATATCAGTTGATGTAGGTTGAAAACACTAAGCAGATCTACAATATTCTGCAAACCTTCAAGTGTCAGGCATCAGCAGACCAATTATAAACATTTACCAACGACAGTGAAAAGAGAGCCCATGTACTGAACATCAAATTACCAAGAATCTTTAAGTACAATACGGTAGAGAAGACACAGCATGAGCACAATGATCAGGTCCCAACGGACCAAACTTGACATTAGTAAACGGAAATATGAATGCATTGTAGATAGAAATATGAATGCACCTCCATCCAGCAATATCGTTGCTCCAGGTAGTCCAAGAACCTCAGCTTCCCTGGCTGCTAAGAAATGACTCCTACCAATAAGGAATGTTTGCTCTAGTCCACTCCTGATAGATGCATCCGAAATTCTCCAGCCTGAATTATTTCTCATTAGGGAAATATTAAAAGAAAGTATTCGGTGAAATAAAGTACAATCTATCTTGCATCATATATCATCTAAAAGCAAGAAATTTTAAGTATCTCTTTTTAAGACTTTAATACATTTGTCTCTAAAGTATTCTGTCTTCTGCACAGGCCTCACATGCAAAGGGCACTTCAAAAATGCATCTTAAGTAAACGTGTCACGGAAATAAATTACACATCACATATTTATTCTCTAAATGAAAGTACGAATATCAAATCAAATATACAAAATGATATTATACCTAAATTACGGAGAGTAAGAATAACACAAGTTGCAGTTGCTGCATTCTGAAGTTGATGGGGTCCAAGCATGCGGAGGTTGACATCCAATAACTCGATGAACTGCATTGACAAAGAGATTAAGGAACTCTTGGTTGAAGTTCAAGGAGTAAAATTATATTTGTTTAAGAATACATGAGCTAGCCATACTTCATTGTCTATTTGAATTACTATGTCGCAACATTGGCTAAGTCCTCCATTGAGCAGGTTTACACCTTTTATGGTACTTCTGTTTCCAGGATCTGAGGCTGATATTACGGGCGAAGACATGGACAATGCTTTATCGCGAAGAATGTACTCAATTCTTGGAAGGAATGGACCACCCAGAATTGTCTGACATCAAATTCAGAAAACTTTTAGGAATAAATTTCAGAAGGGAAAAGGAAGAATGAATCAGGAGAATAATATCACAATAGGGGTTGGAGAATAAACTTCTCTCTCACACGTAGACAAAGACAAACACATAAACTAACATCAACAACTTTATATGAGAAAATTCAATCACATTAGGGGCCTTTTTTTTTCTAATAAGAACAACTTTCATTAAGAAAAAAATGAAAGAATCCATAGGCGTACAAAAAAAGCGGACTCCTTCTACAAGAATGGGAGTCTAACTATACAAGATCATGTCTATAGAATAAAGGCAATGGACTTTGGAAGCCTCTAAGACCTTTTAGTTCAGGTTGCTTCTGCCTCATTTACTGCAATAGACCAATTTTGATGCCTTTCTATATGGCAAAATAATTTGAAAGACAGATTGCAATTTAGTTTTCTTGTGTTGTGCTTGAAGTTCATTGTGACAAAAACTTCAGTTTAGTCTTTCAACCACAACAATTATTTCAAACAATAATTACAGCCAAGCAGAAAACATTTCTGTGATCTTATGCAAGTTCGAGCTGACTTTAGTCAACTCTTCACTTCTTGTAGGTTATTTCAATTAAACCACCGATTCATCCAAAAGCTCGAAAGCTTGTGGTTGAAGGCAAATTTAATTATATATCACCAACACTCCCTCTCACTTGTGGGCTTGAACACAGGACCTCCCTGGACCACCTGCTCTGATACCATATTAAACCACCAATTTATCCAAAAGCTTAAGTTTGTGGTTGACGGCAAATTTAATTATAATATCACCAACAATTTCAACTCATTAGAAAAGAAAAACTAACTAATGCGTGGATAATGAATATCAAAAGCTTAACAAAGTCAAACAGCATCAAAATTACATCATGAAAACAACCTAACTGGACAACCACGTTTAATTATTCCAGCCTTTGCCGTTGCAATGCTTTCCAAAGAGCCACCCAAGGCAGCCACGTGTTCCTCTCCAATTGAAGTTATGACTGCAGCAGCAAGTTCAGAGCTGCAAATTATGTTTGTTGCATCCCGTGCACCACCAAGTCCAGCCTGTTTTAGTTAAAATAAGGGGTAATTGCATCAAATGACAAAAACATTTTTAAAAAAACAGCTTATGGGCCTATCTTTTGAATATTGCGAATATGGAAAAATTAGTGATATCGGTAATCATAGGGTTATCAACTTTTTAATTTGTTACTTTTACAATTTAGAAAATGTAGTGATATGAGCCCTATTATCATAATTTTTTTTGCTATTTTTGCAAAAGCCCCTAAAATAAGACCAAACTGTCAATGACTTACCTCAACTTTTGCAAGAGCCTCTGTTTTTGCTATTTTTGCAAGCTTTTGCTGGAGGAAATAAAAGAAAATACTTGACAAAGAAAAATATTAGTTAAAAGAAAGTGAACCTCAATGACTGCAACATCAACATCTTCTTGAGCAAAGAGCGAGAACGCCATAGCAGTAAGGACCTGGGATAATTTCATCAGCCCGTCTAAAAGATTAAGAAAACATCAATGACTGAATTGGTCCAATGACCTTTAAGAGTTCAAAGGTTTATCATTGACACGAACAATTTATATCTTCCTATATGAAACCAAAAGAAAAAAGAAAAAGATGCAGGATATATTATTAAAGATCACGTGACACACAAATTACAAAGTGAAAACCTAGACACGGTACATCATTTTGCTCAATAAAATCATGTAGAAGAATCAGAAGCAGCAAATAAGCCATTTGAGTTCCTAGAGAATTTCCAATCACAACAGACAGCATGAATTAATACCTCAAAGTGACTTAAATGTCCATTTTCAAGCTCTACTGACTGATCAAAGACCTCTTTATTCCTTTTGAAAAGAGAATTTAGTGCCTTCCCAGAGACCATGTCTCCAGATCTTCCAAGTGAAATACGTTCCCTTATAGTTTCAATATGAGGACTACACATGAAGAAATTCACAATCACAAAGTTAAACCTTCTCAAATCAATCCCGAGTAAGAGTATACAGAAAATTTGATAATTGTTGCAAAAAGGCTGTACCTAGTATAACAACCAACAGAGTATCCCTCTACTCGTAAAATGTTCGAAAGGAATGCCGCAGTCGACCCTTTTCCCTTCGTTCCAGCAATGTGAATTGCCTACAATTGTCCTACCTTTAGCCACTATAAGCTTAACTTTTCATGTGAAATTTTCAAACATGGGTAGTATCTTTTCCCATGAGATGAGTATTAGTATGAATAAAAGATTACAAATCTACCGGCTTTTTAAGACTAATTTAACTCAGTTGAGCTACAGATGAAATGGGTCAGTCCAAAAATGCAAGATTTAGTGAAGACTAGGAAAAATAAGAGGCAATGCAACCTTAAACCTGGATTGCGGATTACCCAGTCGTTCCATCAGCCTTCTCATCCTTCCCAGATCGAACCCATCATCAGAATCAGTGCCTGA

mRNA sequence

ATGGCATGTAATAACGAGGTCTCAGTAGTCAATACCGGTCTGTTTCCGAGTTTGCTTGTGAAGAAAACTTCTGCATCTTTAGTTTCTAAAGAAATAGGGATCCCCAATTCATTGGATGCTTGGATCCAGCAGTCTCTTAGAAAAGCAGCTGAAGTTGTCCTTGATTTGCCTCCACCAATAAGGGCTTCAGTTAAGACAACGGACTCTAATTTTCCACCTGAAAGTCAGTTAACTGCCGACTGTCAGCATTTTATTGTTACATCTCAATCTCACATCATCAAAGTAGACAGATATGAACAAAATTACATGACATTGTATAACATATGGAAAGATAGGAGAAGGCTTACCTTGAAGGAATTCTCTAGCAAAACCAACGTGATTCTTATCACTGGCCATTGCAACCACAAGAGCCAATTGAGCCTCAGGGAAAGCCATTTGAATGGATCTGAGGCTGATATTACGGGCGAAGACATGGACAATGCTTTATCGCGAAGAATGTACTCAATTCTTGGAAGGAATGGACCACCCAGAATTATGAAATGGGTCAGTCCAAAAATGCAAGATTTAGTGAAGACTAGGAAAAATAAGAGGCAATGCAACCTTAAACCTGGATTGCGGATTACCCAGTCGTTCCATCAGCCTTCTCATCCTTCCCAGATCGAACCCATCATCAGAATCAGTGCCTGA

Coding sequence (CDS)

ATGGCATGTAATAACGAGGTCTCAGTAGTCAATACCGGTCTGTTTCCGAGTTTGCTTGTGAAGAAAACTTCTGCATCTTTAGTTTCTAAAGAAATAGGGATCCCCAATTCATTGGATGCTTGGATCCAGCAGTCTCTTAGAAAAGCAGCTGAAGTTGTCCTTGATTTGCCTCCACCAATAAGGGCTTCAGTTAAGACAACGGACTCTAATTTTCCACCTGAAAGTCAGTTAACTGCCGACTGTCAGCATTTTATTGTTACATCTCAATCTCACATCATCAAAGTAGACAGATATGAACAAAATTACATGACATTGTATAACATATGGAAAGATAGGAGAAGGCTTACCTTGAAGGAATTCTCTAGCAAAACCAACGTGATTCTTATCACTGGCCATTGCAACCACAAGAGCCAATTGAGCCTCAGGGAAAGCCATTTGAATGGATCTGAGGCTGATATTACGGGCGAAGACATGGACAATGCTTTATCGCGAAGAATGTACTCAATTCTTGGAAGGAATGGACCACCCAGAATTATGAAATGGGTCAGTCCAAAAATGCAAGATTTAGTGAAGACTAGGAAAAATAAGAGGCAATGCAACCTTAAACCTGGATTGCGGATTACCCAGTCGTTCCATCAGCCTTCTCATCCTTCCCAGATCGAACCCATCATCAGAATCAGTGCCTGA

Protein sequence

MACNNEVSVVNTGLFPSLLVKKTSASLVSKEIGIPNSLDAWIQQSLRKAAEVVLDLPPPIRASVKTTDSNFPPESQLTADCQHFIVTSQSHIIKVDRYEQNYMTLYNIWKDRRRLTLKEFSSKTNVILITGHCNHKSQLSLRESHLNGSEADITGEDMDNALSRRMYSILGRNGPPRIMKWVSPKMQDLVKTRKNKRQCNLKPGLRITQSFHQPSHPSQIEPIIRISA
Homology
[Close]
BLAST of CsGy3G021280 vs. NCBI nr
Match: POE45605.1 (hypothetical protein CFP56_05502 [Quercus suber])

HSP 1 Score: 62.4 bits (150), Expect = 2.3e-06
Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = 0 

Query: 18 LLVKKTSASLVSKEIGIPNSLDAWIQQSLRKAAEVVLDLPPPIRASVKTTDSNFPPE 75
          LL      ++ S  I +PNSL+AWIQQSL K AEVV DLPP + ASV+ T SN PPE
Sbjct: 15 LLNTSLDFAMPSWTISMPNSLEAWIQQSLNKEAEVVRDLPPAMSASVRRTASNSPPE 71

[Close]
BLAST of CsGy3G021280 vs. TrEMBL
Match: tr|A0A2P4GNL1|A0A2P4GNL1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_05502 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06
Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = 0 

Query: 18 LLVKKTSASLVSKEIGIPNSLDAWIQQSLRKAAEVVLDLPPPIRASVKTTDSNFPPE 75
          LL      ++ S  I +PNSL+AWIQQSL K AEVV DLPP + ASV+ T SN PPE
Sbjct: 15 LLNTSLDFAMPSWTISMPNSLEAWIQQSLNKEAEVVRDLPPAMSASVRRTASNSPPE 71

The following BLAST results are available for this feature:
BLAST of CsGy3G021280 vs. NCBI nr
Match NameE-valueIdentityDescription
POE45605.12.3e-0657.89hypothetical protein CFP56_05502 [Quercus suber][more]
BLAST of CsGy3G021280 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G021280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G021280 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P4GNL1|A0A2P4GNL1_QUESU1.5e-0657.89Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_05502 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G021280.1CsGy3G021280.1mRNA