CsGy3G021060 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G021060
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 18916903 .. 18917177 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAGATTGATGATATCATATGGAGATGATGAAACGTGTGCAACAATGTTTGATGCTTCAGAGTACTTAATTGGATGTAGTGTGACAGAATACTATAAAGATCTACAGGTACATTACAAATATTTAAATAATTAAATTTCACACACTTTTATGTACTGAAAATTTATTTTCATTATGAATTGCATGTGTCCAAAAAGGAAAAAAGTAAATTCTATCAAAACTTAGTACTTTGTGAAGACAAGAAGTATTGTTTTTTTGGTAAGAATGGATAA

mRNA sequence

ATGTTGAGATTGATGATATCATATGGAGATGATGAAACGTGTGCAACAATGTTTGATGCTTCAGAGTACTTAATTGGATGTAGTGTGACAGAATACTATAAAGATCTACAGGAAAAAAGTAAATTCTATCAAAACTTAGTACTTTGTGAAGACAAGAAGTATTGTTTTTTTGGTAAGAATGGATAA

Coding sequence (CDS)

ATGTTGAGATTGATGATATCATATGGAGATGATGAAACGTGTGCAACAATGTTTGATGCTTCAGAGTACTTAATTGGATGTAGTGTGACAGAATACTATAAAGATCTACAGGAAAAAAGTAAATTCTATCAAAACTTAGTACTTTGTGAAGACAAGAAGTATTGTTTTTTTGGTAAGAATGGATAA

Protein sequence

MLRLMISYGDDETCATMFDASEYLIGCSVTEYYKDLQEKSKFYQNLVLCEDKKYCFFGKNG
Homology
[Close]
BLAST of CsGy3G021060 vs. NCBI nr
Match: KGN51395.1 (hypothetical protein Csa_5G526360 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 1.7e-20
Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 0 

Query: 1  MLRLMISYGDDETCATMFDASEYLIGCSVTEYYKDLQ----EKSKFYQNLVLCEDKKYCF 60
          MLRL IS GDD+T  T+FDAS+YLIGCSVTEYYKDLQ    EKSK YQNLVLCEDKKYCF
Sbjct: 1  MLRLTISDGDDKTYITIFDASKYLIGCSVTEYYKDLQVYKKEKSKLYQNLVLCEDKKYCF 60

Query: 61 FGKNG 62
          FGKNG
Sbjct: 61 FGKNG 65

[Close]
BLAST of CsGy3G021060 vs. NCBI nr
Match: OIT08014.1 (hypothetical protein A4A49_30234 [Nicotiana attenuata])

HSP 1 Score: 52.8 bits (125), Expect = 4.9e-04
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 0 

Query: 2   LRLMISYGDDETCATMFDASEYLIGCSVTEYYKDL---QEKSKFYQNLVLCEDKKYCFFG 60
           LR+ +S G+      +FDA+EYL GC V EY + +   +E+S +Y+ LVL +DK++ F  
Sbjct: 190 LRIEVSAGERRVRVILFDAAEYLFGCDVKEYIQSICTKKEESNYYRKLVLSKDKEFIFLV 249

[Close]
BLAST of CsGy3G021060 vs. TrEMBL
Match: tr|A0A0A0KP46|A0A0A0KP46_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G526360 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-20
Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 0 

Query: 1  MLRLMISYGDDETCATMFDASEYLIGCSVTEYYKDLQ----EKSKFYQNLVLCEDKKYCF 60
          MLRL IS GDD+T  T+FDAS+YLIGCSVTEYYKDLQ    EKSK YQNLVLCEDKKYCF
Sbjct: 1  MLRLTISDGDDKTYITIFDASKYLIGCSVTEYYKDLQVYKKEKSKLYQNLVLCEDKKYCF 60

Query: 61 FGKNG 62
          FGKNG
Sbjct: 61 FGKNG 65

[Close]
BLAST of CsGy3G021060 vs. TrEMBL
Match: tr|A0A1J6IT36|A0A1J6IT36_NICAT (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_30234 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.2e-04
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 0 

Query: 2   LRLMISYGDDETCATMFDASEYLIGCSVTEYYKDL---QEKSKFYQNLVLCEDKKYCFFG 60
           LR+ +S G+      +FDA+EYL GC V EY + +   +E+S +Y+ LVL +DK++ F  
Sbjct: 190 LRIEVSAGERRVRVILFDAAEYLFGCDVKEYIQSICTKKEESNYYRKLVLSKDKEFIFLV 249

The following BLAST results are available for this feature:
BLAST of CsGy3G021060 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51395.11.7e-2081.54hypothetical protein Csa_5G526360 [Cucumis sativus][more]
OIT08014.14.9e-0440.98hypothetical protein A4A49_30234 [Nicotiana attenuata][more]
BLAST of CsGy3G021060 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G021060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G021060 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KP46|A0A0A0KP46_CUCSA1.1e-2081.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G526360 PE=4 SV=1[more]
tr|A0A1J6IT36|A0A1J6IT36_NICAT3.2e-0440.98Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_30234 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G021060.1CsGy3G021060.1mRNA