CsGy3G021040 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G021040
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Peroxisomal 2,4-dienoyl-CoA reductase
Location	Chr3 : 18877750 .. 18884734 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGACATTCAGAGGGTGGACCTCCTAACTTGTACCCTTTGCATTCTCTATGCTTCAACCTTGGGAATAAGCCCCTTTTTTTTTTTGTGACATTTTGGTCATTCATCTATGCTTTGGGGTATTTCTTAACCGAATACTTGATATATCATACCACGTACGTCCATTACAAATCTGACGATGGTTTGGCATCTTTGTAGGTATGATCGCAGGAATTAAATCCATCCACATCATGTATTGTTTATTCTCCTTTGTTATTTTTAAGTCTTGAACTAAAAGAATTTCGTTTTACAATATTAACAATAAAGGTAGTTAGACTGTTAATAAAGTAGTTACACTGTTATTTTTTGTTGTATTAGCTGTATTAGTTAATCTGTTAGACAGTTATTAGTTGCTACCAAGCATCTATAAATACCAAGCATCTATAAATACCAAGCTTGGTTGATGTAAATATTTTCATATACAAAAATAAAAGAATTTACTGCCGTCAGTAAGTTTTCTTTCAAATTCTGCTTCCTCTGTCATGGTATCAGAGCAATTTCCACAAAGAAAAGTTACAGAATAAAACCCGAACGTCCTTTACCCTCGTGCAGTCTACAGTAATGACGACACCTGAGAGTTCGACGTCCGGCAGCTCCAACCACTCAGTTCTGATTACCTCTTCTGAGCTTAACGCCCAACTAAATTCCTTCATGCTTCATCATTCCATCACTCCAACCACCAACCTTGTTTCTACACCATTGGCAGGATCGAATAGCTACTCATCATGGAGTAGAGCAATGATGTTGGCCTTATTTGGAAAGAACAAAGTTTGGTTCATCACCGGCCTGATCAAAAAACCTTCAAAAGGTAATCTATTATCCGCTTGGAAATGCAACAATGATGTGATAGCTTCTTTGATTATCAACTCCATTTCGAAAGAGATAGCAGCAAGCCTCGTTTATAATGGAAACGTAAAGGAGATGTGGGATGAATTGAAAGAAAGGTATAAACAGTCCAATGGACCTCACATATACCAGTTACGAAAGGACCTAGTAACCACTACACAAGGAAGTTTATCAGTTGAAATATACTATGCAAAAATCACCACTATATGGCAGGAACTTGTGGAATATCGTCCTATGGATGAATGCACTTGTGAAGGCTCAAAGAAAATAATCGATTTATTGAATGCAGAATTCGTAATGACCTTTCTCATGGGATTAAATGAATCCTATTCGCAGATTAGAGCCCAAATTTTGTTGATTGATCCTTTACCTCCCATAAATAGAGTCTTTTCCCTAATCATCCAAGAAGAAAGACAAAGATCCATTGGATGCTCACCCTCCATTGAGAGCATCACATTGATGGCTAACTCTGAAAGAAGATTTTCTTCTAATAAATCCAAGAAGAAAGATACAAGACCTATATGCTTCAATTGTAGCTATACAGGACACACTGCTGACAAATGCTACAAGTTACATGGCTACCCACCGGAACATAGACTTGCCAACAACAATAATTCTGTCCATCAAAGGCAGAACAACACAATCCAAGATGGAAATGACAAAATGACAGAAGTTTCTAAGAGCAATCAATCTGTCTTTTTTGCTAGTCTCAACAGTGATCAATATACACAACTTCTGGGCATGCTTCAAACTCATCTCAACATATCTCAAAATGGTGAGAATTTCAAAAAAGAGACTACACACATAGCAGGTACTTACCTCTCTAACTCACTCAATGATCCCTTAACATGGATCATTGACTCTGGTGCTTCCTCACATAATTGCCATGGCAAGTTTATGTTTACAAATCTCTATAGCGCCTAGAATATGTTTGTTATCTTGCCCACTAAGACTCGTCTAAAGGTTGAGCATATAGGAGATGTTTTCATATCAAATGATCTAGTCCTGAAAGATGTACTTTATATTCCTGACTTCAAGTATAACCTGTTGTCAGTAAGTACTCTCCTCAAGGATGACAAACTTGTCATATCATTTGCTGATTCTAATTGTCTTATTCAGGACAAGTGGCTTTCGAAAACGATTGGGAAGACTTAATTAACTAATAGGCTCTACCTACTCAGAATGAAAAATGAAAGGGTTAATTGCATTCAGCACACTACACTAATGTCTAAAGTCTCGGCCTCTATGTGGCATAAACGGATGGGACATCCCTCTATCAGCAGAATAAAGGAGTTAGCTAAGATGATAGAAATTTCTGACTTTCCAAATTGTAAAGAAGTCTGCCATATTTGAACCTTAGCTAAACAAAGACGTCTCTCTTTTCCTATATTAAATAATATTGCTGAAAATGTATTTGATCTTATACATTGTGACATATGGGGTCCTTTCAAACTCCAACACATGCTGGTCATTCATGTTTTGCCACCATTGTAAATGATAAATCTAGATACACTTGGGTATATCTTTTGAAACATAAGAGTGATATTCTACAAGTTATTCCTAGATTTTTCAAGTTAATTGAAACCCAATTTTCAAAAGTCATCAAGGTATTTCGATCTGACAATGCTCCTGAGTTGAATTTCAGGGATCTTTTTGCCAAAACTAGAACAACTCATCAATTCTCGTGTGCTTACACTCCTCAGCAAAATTCAGTAGTGGAAAGAAAACACCAACACCTTCTTAACATAGCAAGAGCATTGATGTTCCAATCAAAGGTTCCTCTTATCTTTTGGGGAGAATGTGTTCTAAGTGCTGCATACTTGATCAACAGAACACATATGGTATTACTATCAAATAACACTCCCTTTGCTGCTCTATTCAAGAAAAAAGCAGATTACAACATCATTAAGACCTTCGGGTGTCTTGCCTATGCCTCTACCCCCTCAGTAAACAGATCTAAGTTTGATCCTAGAGCACAACCTTGTGTTTTTATAGGGTTCCCACCATGCATAAAAGGATACAGATTATATGACATAGCCAAGAGAAAGTTTATTATATCTAGGGATGTCCTATTCTTTGAAGAATTATTTCCCTTTCATTCTACCAAAGAAAAGGACATTCTCATCTTCCATGACTTCCTTGAGCAATTCGTCATACCATGCCCCCTATTTGATTGCCTAGAAAAGGAAGATATTATTGATGTAACTACTGATGCAAGACCTACGACAGAGGATACCCCTGAAGACAGCCACGGTGTTAATGATCAAAATCCACATGTCAGTAACTCAGAAGAAACCAGTAACACTGACCAAGCACCAATTTCCATCATGACCAGAAAATTCTTCTGACCACACCACCCACCATCTTACCTAAAAGACGTCCATTGCAACCTCACCTCCCAAAACTCAACTCCCTTTCCCCTTAACCAATACCTCTCTTATAATGCCTATTCTCAACACCATAAGAACTATATGTTCAATGTTACCTCTATCTATAAACCCACATATTATCACCAAGCTGTGAATCATCAGACTTGGAGAAAAGCTATGGCTGAGGAAATAGAAGCCATGGAAAGAACCAATACATGGACAATTGTATCCCTTCCAAAGAATCATCACACCGTTGGTAGCAAATGGGTGTACAAAGTAAAGTGCAAACCGGATGGTACCATTGATAAATACAAGGCAATACTTGTAGCAAAGGGCTATAACCAGCAAGAGGGAATCGATTTTTTGGATACATTTTCACCAGTGACGAAAATAAGCACTGTGAAGATATTCTTAGCTCTTGCTACATCCTATAATTGGTCCATTAGCCAAATGGACATAAATAATGCATTCCTCAATGGAGACTTATTTGAAGAAGTGCACATGACCCTACCATTGGGTTATCAAACCTCTCAAGTACCCAGACAAAAGAGAGAAATTGGCTTGTAAACTAAATAAGTCCATTTACGGTCTTAAACAAGCATCAAGGCAATGGTTCCTAAAATTTGCAGCAGCAACATATATCCTCACATGGTTTCATCCAATCCAAGGTTGATTACTCCTTATTTACTAAGGGGAATGGAAGCACCTTTTGTAGCATTATTAGTATATGTTGATGACATATTACTAACAGGACCATCTCCTTCGAGTATCAACTCAGTCAAAGATTCTTTGAAGGCACACTTCAAATTAAAGGACCTAGGGCAAGCAACATACTTCTTGGGTCTAGAATTATCAAGATTTGCGAGGACTTATGCTCTCCCAAAAAAAATATTGTCTTCAAATCCTAGAAGATACTGGTTTTCTAGATTCTAAATCAGTTGTAGCACCTATGGATCCTAATCTGAAGCTATGTAAATCTGAAGGAGAACAACTAACTGAGGAAGACGTCACTTGCTATAGAAGATTAATTGACAGCTTGATATACTTACAAATATCCAGACCTGATATTTGCTTCTCTGTTCACCGTTTAAGCCAATTTTTGCACAAGCCTACTAAACATCACCTAGATGCTGCTCATCACCTATTGAAGTACCTCAAAGGTTCCCCAGGACAAGGTGTTCTAATAAAACCTATTGATTCGTTTCACTTAAAAGCCTTCATTGATGCTGATTGGGGATCGTGCCTTGACACTAGAAGATCGGTCACAGGGTTCTGTATCTTCCTAGGAGATTCCATCATCTCCTGGAAATCTAAGAAACAAGCAACTGTCTCAAGGTCCTCTGCAGAAGCTGAATATAGGGCCTTAGCATCAGTCACTAGTGAGAGTATGGACCACACATCTCCTTACTGATTTTAAAGTAAAGACCTTGATGTCAGCCACTGTTTTCTGTGATAATCAAGCAGCCATTGCTATTGCTTCGAATCCGACATTTCATGAACTGACGAAGCACATAGAAATTGATTGTCATTTTATTCGAGACAAAATAGTTGAAGGGTTTCTAAAGGTTTTACCTATCAACACTAGCCTACAACTAGCTGATATGTTCACTAAAGCACTACCTTCATCCACCTTAAACAGACATATATCCAAGTTGGGAATGAAAGACATTCATCGTCCAACTTGAGGGGGAGTATTAACAATAAAAGTAGTTAGACTGTTAATAAAGTAGTTAGACTGTTATTTTCTGTTGTATTAGTTGTATTAGTTAATCTGTTAGACAGTTATTAATTGCTACCAAGCATCTATAAATATCAAGCTTGGTTTATGTAAATATTTTCATATACAAAAATAAAAGAATTTACTGCCGTCAGTAAGTTTTCTCCCAAATTCTGCTTCCTCTGTCATACAAGAATTTATCTGACTGGTCCTATATACTGCTATCATATTAGATGAGTAATTAGTATAAATTCATCTACTCTCTTATAACACGATAATATTAATTAGTTGGATATTCCAGTCAATAGAACAATGATTTTGTTTTCATTCATAGTATTGTGTCTATTTTGAAGCTGATATTTGTTACTCAACAGGAGAAGAAATAATGCTCGTTGTTTAGCCTCTTGTTTTTTACATCAAACATAAAGATCACTTATTCATGTTGAACTTTTTGTTAACAAGAACATCAATAATATGGATGCTGCTCCACGAACATCCAACCAGATTCAGGAGACTGCTAAGGAACGACCATCCTTAGCAGTCTCCTGAATCTGGTTGGATGGTCCCTAATATGAAGGTGTCTTTTTTTCAATTGTTCTATTTAATATTTATCATGTTGGTAACTTAAGGCTTTTGTGGGTAGGAATTAGAATTTTTATTTATTTGTTTGTTTATTATTTTTATTTCATTTTAATCTCAAAGGCTTACTTTTGAACCATTGGGTTGAAAATTTTATAAAAAAAGAGCTTGTTTTGTTTCTGGTATATGGGGTTGAGGCCATGCTAAATCTCTGGTGGGTTATTTGGAACATGGACCCCTCCAGTCCTATGATTTGTAGAATAAAAAGACTAACTTTGGCTCGTATGTTAATTATGTTGCATTTTCTATATGATACTAAAGTGCTCTAAGATCTTTTAACTTGAGTATGTTATAAATGTATGTGTAGGCAGACTCACTTACTAATAGATATAAATTACCCATGTCATGCTTTAAAAAATCTGAACTTTATTTTGATCTGAAACCTGTTATTTGTTTACTATCTATTGCACGCATTTGGATTTAAAGGTGATGTTCGTAAACAAAAAGACGAAAATAGTGTAGCGAAGTCTACTTTCAGTAATCTTGGTAGTCTAGACATTCTTAGGATTGCAGTAGCCTGGGAACTTTCTAGTATCACAGAAGATTTGTCTTCAAATGGATTTCGAACAGGTTCTGTTTGCATTTTATATTTGTGCTTATTTGGTTGGATCATCGATCACTTCAAGTTCTTTTATTTTTTTGGCTTTATATGTGAATGAACTTGGCTTGGATAGATGATATGTACGCAATGTTTCAGAAACTTGCTGAGATAATTTTTCAGTCAACACTTTGAAGAAATAAGAGCAGTTATGTTCTTGTAGTTTTTTTTTTTCTTCCCTTATGGTTTAAAATAATGAATGATTATCATTCATGGGTTGAGACATGTTCTAATTATTCCATAAAAGTACATATAAAATAGATAGTCTTATATTCAAGTCTGGCTTGTAACTTTTACCTTTATTAGTTATCATTCATTTAACTTGACAACGAGAGAAGTGGTTTGTGAATTTTATTGGGATTTATAAATTTGACTTTTTAAAAGTCTTTTTTATTCTATAGTCCTCTCTATGGTTTCTTGCAAATAATAAACTTTCGTTAGATTTGAGTGGTAATCATGAATAATGTAAAAAATGTAACAAAAATAAATTTGTAACAAGGAACCAGAAACAAGTCTTTAATGTCGGTTTAAAACTGACATTAATTCCCAACCGACATTAAAGGTCTTTATAACACTAGAAAAGATGTCGGTTTGAAACCAACATTAAAGATCAAATTTCTTCTAATGGGCAAACATGGTATGTATAACAAATGCACCAAACAACTATTCAAACCATACGGTGGAGTTGATTTCCATCACTAAACTTACAAATTCATGAATTTGTTTGACTCTACAGTGCCATCACTAAACATGGCAGTATGGATAACAAGTTGA

mRNA sequence

ATGGAAGGACATTCAGAGGGTGGACCTCCTAACTTGTACCCTTTGCATTCTCTATGCTTCAACCTTGGGAATAAGCCCCTTTTTTTTTTTGTGACATTTTGGTCATTCATCTATGCTTTGGGGTATTTCTTAACCGAATACTTGATATATCATACCACGTACGTCCATTACAAATCTGACGATGGTGATGTTCGTAAACAAAAAGACGAAAATAGTGTAGCGAAGTCTACTTTCAGTAATCTTGGTAGTCTAGACATTCTTAGGATTGCAGTAGCCTGGGAACTTTCTAGTATCACAGAAGATTTGTCTTCAAATGGATTTCGAACAGTGCCATCACTAAACATGGCAGTATGGATAACAAGTTGA

Coding sequence (CDS)

ATGGAAGGACATTCAGAGGGTGGACCTCCTAACTTGTACCCTTTGCATTCTCTATGCTTCAACCTTGGGAATAAGCCCCTTTTTTTTTTTGTGACATTTTGGTCATTCATCTATGCTTTGGGGTATTTCTTAACCGAATACTTGATATATCATACCACGTACGTCCATTACAAATCTGACGATGGTGATGTTCGTAAACAAAAAGACGAAAATAGTGTAGCGAAGTCTACTTTCAGTAATCTTGGTAGTCTAGACATTCTTAGGATTGCAGTAGCCTGGGAACTTTCTAGTATCACAGAAGATTTGTCTTCAAATGGATTTCGAACAGTGCCATCACTAAACATGGCAGTATGGATAACAAGTTGA

Protein sequence

MEGHSEGGPPNLYPLHSLCFNLGNKPLFFFVTFWSFIYALGYFLTEYLIYHTTYVHYKSDDGDVRKQKDENSVAKSTFSNLGSLDILRIAVAWELSSITEDLSSNGFRTVPSLNMAVWITS

Homology

[Close]

BLAST of CsGy3G021040 vs. NCBI nr
Match: XP_008447102.1 (PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase isoform X1 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-06
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 61  DGDVRKQKDENSVAKSTFSNLGSLDILRIAVAWELSSITEDLSSNGFRTVPSLN 115
           +GDVRKQ+D +SV +STF+NLGSLDIL  A A       EDLS NGFRTV  ++
Sbjct: 67  EGDVRKQEDASSVVESTFNNLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 120

[Close]

BLAST of CsGy3G021040 vs. NCBI nr
Match: XP_016900343.1 (PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase isoform X2 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-06
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 61  DGDVRKQKDENSVAKSTFSNLGSLDILRIAVAWELSSITEDLSSNGFRTVPSLN 115
           +GDVRKQ+D +SV +STF+NLGSLDIL  A A       EDLS NGFRTV  ++
Sbjct: 67  EGDVRKQEDASSVVESTFNNLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 120

[Close]

BLAST of CsGy3G021040 vs. NCBI nr
Match: XP_004139835.1 (PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-05
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 61  DGDVRKQKDENSVAKSTFSNLGSLDILRIAVAWELSSITEDLSSNGFRTVPSLN 115
           +GDVRKQ+D +SV  STF+ LGSLDIL  A A       EDLS NGFRTV  ++
Sbjct: 67  EGDVRKQEDASSVVDSTFNKLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 120

[Close]

BLAST of CsGy3G021040 vs. NCBI nr
Match: KGN44284.1 (hypothetical protein Csa_7G238970 [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-05
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 61  DGDVRKQKDENSVAKSTFSNLGSLDILRIAVAWELSSITEDLSSNGFRTVPSLN 115
           +GDVRKQ+D +SV  STF+ LGSLDIL  A A       EDLS NGFRTV  ++
Sbjct: 26  EGDVRKQEDASSVVDSTFNKLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 79

[Close]

BLAST of CsGy3G021040 vs. NCBI nr
Match: XP_022147874.1 (peroxisomal 2,4-dienoyl-CoA reductase [Momordica charantia])

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-05
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 61  DGDVRKQKDENSVAKSTFSNLGSLDILRIAVAWELSSITEDLSSNGFRTVPSLN 115
           +GDVRKQ+D + V +STF++LGSLDIL  A A       EDLS NGFRTV  ++
Sbjct: 67  EGDVRKQEDASRVVESTFNSLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 120

[Close]

BLAST of CsGy3G021040 vs. TAIR10
Match: AT1G10030.1 (homolog of yeast ergosterol28)

HSP 1 Score: 45.4 bits (106), Expect = 2.8e-05
Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 0


Query: 18 LC-FNLGNKPLFFFVTFWSFIYALGYFLTEYLIYHT 53
          LC FNL NKPL +  TF SFIYALG+FLTEYL Y T
Sbjct: 60 LCAFNLENKPL-YLATFLSFIYALGHFLTEYLFYQT 94

[Close]

BLAST of CsGy3G021040 vs. Swiss-Prot
Match: sp|O80594|ERG28_ARATH (Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana OX=3702 GN=At1g10030 PE=2 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 5.1e-04
Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 0


Query: 18 LC-FNLGNKPLFFFVTFWSFIYALGYFLTEYLIYHT 53
          LC FNL NKPL +  TF SFIYALG+FLTEYL Y T
Sbjct: 60 LCAFNLENKPL-YLATFLSFIYALGHFLTEYLFYQT 94

[Close]

BLAST of CsGy3G021040 vs. TrEMBL
Match: tr|A0A1S4DWK3|A0A1S4DWK3_CUCME (peroxisomal 2,4-dienoyl-CoA reductase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489636 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.4e-06
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 61  DGDVRKQKDENSVAKSTFSNLGSLDILRIAVAWELSSITEDLSSNGFRTVPSLN 115
           +GDVRKQ+D +SV +STF+NLGSLDIL  A A       EDLS NGFRTV  ++
Sbjct: 67  EGDVRKQEDASSVVESTFNNLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 120

[Close]

BLAST of CsGy3G021040 vs. TrEMBL
Match: tr|A0A1S3BHI1|A0A1S3BHI1_CUCME (peroxisomal 2,4-dienoyl-CoA reductase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489636 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.4e-06
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 61  DGDVRKQKDENSVAKSTFSNLGSLDILRIAVAWELSSITEDLSSNGFRTVPSLN 115
           +GDVRKQ+D +SV +STF+NLGSLDIL  A A       EDLS NGFRTV  ++
Sbjct: 67  EGDVRKQEDASSVVESTFNNLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 120

[Close]

BLAST of CsGy3G021040 vs. TrEMBL
Match: tr|A0A0A0K5Q8|A0A0A0K5Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238970 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-05
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 61  DGDVRKQKDENSVAKSTFSNLGSLDILRIAVAWELSSITEDLSSNGFRTVPSLN 115
           +GDVRKQ+D +SV  STF+ LGSLDIL  A A       EDLS NGFRTV  ++
Sbjct: 26  EGDVRKQEDASSVVDSTFNKLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 79

[Close]

BLAST of CsGy3G021040 vs. TrEMBL
Match: tr|A0A0B0NQ25|A0A0B0NQ25_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_16819 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.9e-04
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 55  VHYKSDDGDVRKQKDENSVAKSTFSNLGSLDILRIAVAWELSSITEDLSSNGFRTVPSLN 114
           +H    +GDVRKQ+D   V +STF + G +DIL  A A       EDLS+NGFRTV  ++
Sbjct: 61  IHAVGFEGDVRKQEDAKRVIESTFKHFGHIDILVNAAAGNFLVPAEDLSTNGFRTVMDID 120

[Close]

BLAST of CsGy3G021040 vs. TrEMBL
Match: tr|A0A1U8LKR0|A0A1U8LKR0_GOSHI (peroxisomal 2,4-dienoyl-CoA reductase-like OS=Gossypium hirsutum OX=3635 GN=LOC107928399 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.9e-04
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 55  VHYKSDDGDVRKQKDENSVAKSTFSNLGSLDILRIAVAWELSSITEDLSSNGFRTVPSLN 114
           +H    +GDVRKQ+D   V +STF + G +DIL  A A       EDLS+NGFRTV  ++
Sbjct: 61  IHAVGFEGDVRKQEDAKRVIESTFKHFGHIDILVNAAAGNFLVPAEDLSTNGFRTVMDID 120

The following BLAST results are available for this feature:

BLAST of CsGy3G021040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447102.1	2.1e-06	59.26	PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase isoform X1 [Cucumis melo]	[more]
XP_016900343.1	2.1e-06	59.26	PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase isoform X2 [Cucumis melo]	[more]
XP_004139835.1	1.8e-05	57.41	PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Cucumis sativus]	[more]
KGN44284.1	1.8e-05	57.41	hypothetical protein Csa_7G238970 [Cucumis sativus]	[more]
XP_022147874.1	3.0e-05	55.56	peroxisomal 2,4-dienoyl-CoA reductase [Momordica charantia]	[more]

BLAST of CsGy3G021040 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10030.1	2.8e-05	72.22	homolog of yeast ergosterol28	[more]

BLAST of CsGy3G021040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80594\|ERG28_ARATH	5.1e-04	72.22	Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana OX=3702 GN=At1g10030 ...	[more]

BLAST of CsGy3G021040 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DWK3\|A0A1S4DWK3_CUCME	1.4e-06	59.26	peroxisomal 2,4-dienoyl-CoA reductase isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A1S3BHI1\|A0A1S3BHI1_CUCME	1.4e-06	59.26	peroxisomal 2,4-dienoyl-CoA reductase isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0K5Q8\|A0A0A0K5Q8_CUCSA	1.2e-05	57.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238970 PE=4 SV=1	[more]
tr\|A0A0B0NQ25\|A0A0B0NQ25_GOSAR	2.9e-04	46.67	Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_16819 PE=4 SV=1	[more]
tr\|A0A1U8LKR0\|A0A1U8LKR0_GOSHI	2.9e-04	46.67	peroxisomal 2,4-dienoyl-CoA reductase-like OS=Gossypium hirsutum OX=3635 GN=LOC1...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR005352	Erg28

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G021040.1	CsGy3G021040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005352	Erg28	PFAM	PF03694	Erg28	coord: 19..55 e-value: 9.4E-6 score: 25.9

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G021040	Watermelon (97103) v2	cgybwmbB209
CsGy3G021040	Wax gourd	cgybwgoB281
CsGy3G021040	Cucurbita maxima (Rimu)	cgybcmaB308
CsGy3G021040	Cucurbita maxima (Rimu)	cgybcmaB368
CsGy3G021040	Cucurbita moschata (Rifu)	cgybcmoB281
CsGy3G021040	Cucurbita moschata (Rifu)	cgybcmoB339
CsGy3G021040	Cucurbita pepo (Zucchini)	cgybcpeB380
CsGy3G021040	Cucurbita pepo (Zucchini)	cgybcpeB397
CsGy3G021040	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G021040	Bottle gourd (USVL1VR-Ls)	cgyblsiB192
CsGy3G021040	Bottle gourd (USVL1VR-Ls)	cgyblsiB199
CsGy3G021040	Melon (DHL92) v3.5.1	cgybmeB212
CsGy3G021040	Melon (DHL92) v3.6.1	cgybmedB216
CsGy3G021040	Watermelon (Charleston Gray)	cgybwcgB217
CsGy3G021040	Watermelon (97103) v1	cgybwmB232
CsGy3G021040	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G021040	Silver-seed gourd	carcgybB0757
CsGy3G021040	Cucumber (Chinese Long) v3	cgybcucB117