CsGy3G020820 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATGGCTCAGATTGCTAAGATTGCTGAGAAGGTGCAGCTGAAGTCATCTGGGGAGAAATTCTTTGAGTTTTTCAAGAACAAAATGGACTATTTTCCTCGAATGTTCGCTGGAAACGTTGAGAGCTATAAGTTTGTGGAAGGAAATAGTTTCACTCATGGCAGTGTCTCCATCTGGAAATATGACATTGGTTTCGGTGAGATCCGTCTCTTGTTCTTCTTCTCCTTCTCTTCTTCTCTGCTCCACAACTAATTTCAAATGATTTTTGCCAGTTTCATTTTTTTTATTTTGTGAGAAAAAAGAGACACCCTAATGTCTCACATCTACCATATTGAAGATGTACACTAGTAAATTTTAATTGTTTTTAAAATTAGTTCTTTGATTTTTTTTCACATTAATTTTGTTTTAAATTTACAAATATATTCCATATTTTAAACATTAAATTTGTGTCCTACTAGATTTGAGGTTTTTTAAAACAATTTAAAAAGTAAAAAAAAGATAATGATCTAGAAGGAAGATTTTGTAGGATCTTTCCAAAAGTAGTGAAAAAATATTTATGATAATTGAGCTCATGTCATTTCTAAATTACAAATATAATAAATTTAAAAGTCGATAATTCTATCATTACCAATAGCCCTTCGAAATCCTATGATCACTGCCCGATAGTCGTCTCATATCACTAATATTGTCGTATTCGCAGTATGCAAAAAAACAGGTATCATGAGCTGTTTCTTTTTCTAAATGTTTTTGTCATTTGATGCAATTTTCTAAATTTTTATGTTTACGAACATATTATATACTTTTATTAAAAAAAAAAGTCTTATCGAGTACAACTTGGATAGAGAATTGAACGGAAGAACTATTATCCATGAAACATAAAAATGTCACATTTTGGCTATTAGATACTTTTTAAATCTACATATTGAATTAAAAGGTAAAGATTGGGCAACTCATTAGACTATTTCAAAAGCCCGAGGGACTACATGACATAATATCAAAGTTTAGAAAGTAAACATATATTTAAACCAAACGCATTATATACCAAAAAAAAAGAAAAGTAAATTAAATAATAAACTATATTTATACGGATAAGAATAAGGTTAATTTAATTTTTTTAGGAAGGAGGTGTATTAATTTAAAAGTTTACTTTTGATTTAAATTTTAATTATTAAGTGTTTAAACTTCTAAATTTGTATCTAATAAATCTTATAGTTTAATAGATATGAATAAGTCTGGTAGATTTTAAATTTTGATCCCCATCAATTTTTTAAATATACAAGTGTATGGAATGACATAATTATATTAAAGTTTATGTCTATAATAGAGTTTTTAAACTTCAATTTTATATCCAATAAGTTCGTCAATAACATATCAATCATCTATTAGATACAAATTTGAATATTGAAAAATTATTGACACAAAAATTAAGTCGTGAATGATTACCTCTTAAAGGATTTTAAAAGTTAATAGAATGTTAATCTCAAAATTCCCAAAAACTTACAATTTAATATTTACCTTTGTATTTTTCAATTTACAAATGATGTATGCATGGTTAATGTCTTCTTTAATTTGTGTTCGACCTAATAACTCAGTTTTTGGATTGGATGATGATTTAACCATTGATATGGGGTTGGAAACATATACATACACAGGTAGGGCAGTTGAAGTAAAGATGAAACTACTTGTGGATGAGGCCAACAAAACAATCATCTATGAATGTCTTGAAGGAGATCTGTTCAAAGACTTTGATATGTTCAAAGTGAAAATTGAAGTGACTGATGGTGGAAGCAGTGGGAACAGCTCAGTGAATTGGTGTTTGGAGTTTGTGAAGTCAAATGAAAATGTGGCTCCACCAAATGACTATCTTCAATTTGGAGTTAAAATATGCAAAGATGTGGATGCTTACCTTTCCAACAATTGAACGACAAACATAATATAATATACCAACTTTGGATTGGTTCTTCAAATTAATATCTTAAATAAGATGGCTTTCCCTCTTAACCTCCATTGTTGTGTGTACTTTGAAGAATGTTATTATAATGGTAAAGATAATAATATCAATTTCAATAATGTTCGCATCCTGCTTTAATTATTATCTATACATATCTTTAATTTCTTTTATAT AAAAATGGCTCAGATTGCTAAGATTGCTGAGAAGGTGCAGCTGAAGTCATCTGGGGAGAAATTCTTTGAGTTTTTCAAGAACAAAATGGACTATTTTCCTCGAATGTTCGCTGGAAACGTTGAGAGCTATAAGTTTGTGGAAGGAAATAGTTTCACTCATGGCAGTGTCTCCATCTGGAAATATGACATTGGTTTCGGTAGGGCAGTTGAAGTAAAGATGAAACTACTTGTGGATGAGGCCAACAAAACAATCATCTATGAATGTCTTGAAGGAGATCTGTTCAAAGACTTTGATATGTTCAAAGTGAAAATTGAAGTGACTGATGGTGGAAGCAGTGGGAACAGCTCAGTGAATTGGTGTTTGGAGTTTGTGAAGTCAAATGAAAATGTGGCTCCACCAAATGACTATCTTCAATTTGGAGTTAAAATATGCAAAGATGTGGATGCTTACCTTTCCAACAATTGAACGACAAACATAATATAATATACCAACTTTGGATTGGTTCTTCAAATTAATATCTTAAATAAGATGGCTTTCCCTCTTAACCTCCATTGTTGTGTGTACTTTGAAGAATGTTATTATAATGGTAAAGATAATAATATCAATTTCAATAATGTTCGCATCCTGCTTTAATTATTATCTATACATATCTTTAATTTCTTTTATAT ATGGCTCAGATTGCTAAGATTGCTGAGAAGGTGCAGCTGAAGTCATCTGGGGAGAAATTCTTTGAGTTTTTCAAGAACAAAATGGACTATTTTCCTCGAATGTTCGCTGGAAACGTTGAGAGCTATAAGTTTGTGGAAGGAAATAGTTTCACTCATGGCAGTGTCTCCATCTGGAAATATGACATTGGTTTCGGTAGGGCAGTTGAAGTAAAGATGAAACTACTTGTGGATGAGGCCAACAAAACAATCATCTATGAATGTCTTGAAGGAGATCTGTTCAAAGACTTTGATATGTTCAAAGTGAAAATTGAAGTGACTGATGGTGGAAGCAGTGGGAACAGCTCAGTGAATTGGTGTTTGGAGTTTGTGAAGTCAAATGAAAATGTGGCTCCACCAAATGACTATCTTCAATTTGGAGTTAAAATATGCAAAGATGTGGATGCTTACCTTTCCAACAATTGA MAQIAKIAEKVQLKSSGEKFFEFFKNKMDYFPRMFAGNVESYKFVEGNSFTHGSVSIWKYDIGFGRAVEVKMKLLVDEANKTIIYECLEGDLFKDFDMFKVKIEVTDGGSSGNSSVNWCLEFVKSNENVAPPNDYLQFGVKICKDVDAYLSNN
BLAST of CsGy3G020820 vs. NCBI nr
Match: XP_004145832.1 (PREDICTED: MLP-like protein 34 [Cucumis sativus]) HSP 1 Score: 315.1 bits (806), Expect = 1.3e-82 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CsGy3G020820 vs. NCBI nr
Match: XP_008465556.1 (PREDICTED: MLP-like protein 28 [Cucumis melo]) HSP 1 Score: 300.4 bits (768), Expect = 3.4e-78 Identity = 143/153 (93.46%), Postives = 149/153 (97.39%), Query Frame = 0
BLAST of CsGy3G020820 vs. NCBI nr
Match: XP_004151401.1 (PREDICTED: MLP-like protein 28 [Cucumis sativus] >KGN57823.1 hypothetical protein Csa_3G331330 [Cucumis sativus]) HSP 1 Score: 250.4 bits (638), Expect = 4.0e-63 Identity = 114/153 (74.51%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of CsGy3G020820 vs. NCBI nr
Match: XP_022143420.1 (uncharacterized protein LOC111013301 [Momordica charantia]) HSP 1 Score: 249.6 bits (636), Expect = 6.9e-63 Identity = 118/154 (76.62%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of CsGy3G020820 vs. NCBI nr
Match: XP_008457054.1 (PREDICTED: MLP-like protein 28 [Cucumis melo]) HSP 1 Score: 230.7 bits (587), Expect = 3.3e-57 Identity = 109/153 (71.24%), Postives = 133/153 (86.93%), Query Frame = 0
BLAST of CsGy3G020820 vs. TAIR10
Match: AT1G70850.1 (MLP-like protein 34) HSP 1 Score: 91.7 bits (226), Expect = 4.3e-19 Identity = 50/142 (35.21%), Postives = 76/142 (53.52%), Query Frame = 0
BLAST of CsGy3G020820 vs. TAIR10
Match: AT1G70830.1 (MLP-like protein 28) HSP 1 Score: 88.2 bits (217), Expect = 4.8e-18 Identity = 49/148 (33.11%), Postives = 80/148 (54.05%), Query Frame = 0
BLAST of CsGy3G020820 vs. TAIR10
Match: AT1G70890.1 (MLP-like protein 43) HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15 Identity = 46/148 (31.08%), Postives = 76/148 (51.35%), Query Frame = 0
BLAST of CsGy3G020820 vs. TAIR10
Match: AT1G70840.1 (MLP-like protein 31) HSP 1 Score: 79.3 bits (194), Expect = 2.2e-15 Identity = 43/148 (29.05%), Postives = 77/148 (52.03%), Query Frame = 0
BLAST of CsGy3G020820 vs. TAIR10
Match: AT1G70880.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 78.6 bits (192), Expect = 3.8e-15 Identity = 45/141 (31.91%), Postives = 68/141 (48.23%), Query Frame = 0
BLAST of CsGy3G020820 vs. Swiss-Prot
Match: sp|Q9SSK7|MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.8e-18 Identity = 50/142 (35.21%), Postives = 76/142 (53.52%), Query Frame = 0
BLAST of CsGy3G020820 vs. Swiss-Prot
Match: sp|Q9SSK9|MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 8.6e-17 Identity = 49/148 (33.11%), Postives = 80/148 (54.05%), Query Frame = 0
BLAST of CsGy3G020820 vs. Swiss-Prot
Match: sp|Q9SSK5|MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=MLP43 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.8e-14 Identity = 46/148 (31.08%), Postives = 76/148 (51.35%), Query Frame = 0
BLAST of CsGy3G020820 vs. Swiss-Prot
Match: sp|P85524|KIRO_ACTDE (Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 3.1e-14 Identity = 42/144 (29.17%), Postives = 76/144 (52.78%), Query Frame = 0
BLAST of CsGy3G020820 vs. Swiss-Prot
Match: sp|Q941R6|MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2) HSP 1 Score: 79.3 bits (194), Expect = 4.0e-14 Identity = 43/148 (29.05%), Postives = 77/148 (52.03%), Query Frame = 0
BLAST of CsGy3G020820 vs. TrEMBL
Match: tr|A0A1S3CQL5|A0A1S3CQL5_CUCME (MLP-like protein 28 OS=Cucumis melo OX=3656 GN=LOC103503185 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 2.2e-78 Identity = 143/153 (93.46%), Postives = 149/153 (97.39%), Query Frame = 0
BLAST of CsGy3G020820 vs. TrEMBL
Match: tr|A0A0A0L7N6|A0A0A0L7N6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G331330 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 2.7e-63 Identity = 114/153 (74.51%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of CsGy3G020820 vs. TrEMBL
Match: tr|A0A1S3C4Q2|A0A1S3C4Q2_CUCME (MLP-like protein 28 OS=Cucumis melo OX=3656 GN=LOC103496823 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.2e-57 Identity = 109/153 (71.24%), Postives = 133/153 (86.93%), Query Frame = 0
BLAST of CsGy3G020820 vs. TrEMBL
Match: tr|A0A1S3C5B3|A0A1S3C5B3_CUCME (major latex protein 15-like OS=Cucumis melo OX=3656 GN=LOC103496826 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 2.2e-49 Identity = 95/151 (62.91%), Postives = 122/151 (80.79%), Query Frame = 0
BLAST of CsGy3G020820 vs. TrEMBL
Match: tr|A0A0A0L771|A0A0A0L771_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G337350 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.8e-44 Identity = 89/154 (57.79%), Postives = 118/154 (76.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|