CsGy3G020530 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G020530
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ribosome biogenesis protein BRX1-like
Location	Chr3 : 17403420 .. 17416337 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCACAAGGCTCTGTGATTTCTGTATTCTCTATTTCCTTGCCATCACTGAACGGTTCATCGGCCTCGGTGTCTCCGACATCGCGGTCGTCACTGTTTTCCGGCTTTTGTTTCCGCAAACACCAATTACCGCTCCAATTCACTGCTTAGAGAATTTAATTGCACATATTGCTCCTTGAAGTGGAAAAAACGATTCCCCTTTCTCCTCTTGATTTTCTAATTGTAAGCCCTCTCTCTCTCTTAGTTTTTTCTTTAATTTCTTACATTAATTTTGTACATTCTTGTAATTGCTATCATTTATCTTAGTGATGAAATTAGACTAAACCCTATAATGTCTTTGTTGAATCATCGAGACTTGTTGCCTTTCATCGAATTTTCATGTTTAATTGGCGATAATGAAAGGCTTTTTCTTTGTTTAGTTAGAATAATTCCTATTACTTAGGGATATTGTTGTTTGATTTCATTTTTCCGTTTCCACTTGCTGGTTTGTAGCTAAAGTGGGTTTCTATTTTAGTTTATTTTTGTTCACTTATTTACCTGTTTTGATGAGTAATATGAAGTGAAATGTGCAAATCATTTGTGTGCTTTCAATCTCAACATTCTGGTATCAGAGCAAGGTTGGGTATTGTGTGGAGCAGCAGTCTTTAAGATTTTTGCAGCAGCAAAAGAAAAATGACTACGGAAAAGAATGAAGGAAGTTTTATACAACAAGCCATTCCACGCTTTGATGGTCACTATGATCACTGGAGCATTGGGAGTTGGTAGAACCTGGATATGTTGAACCAGCTAGCGAGTCATTGCAGACAAATGCTCAACAGAAGAAAAATGATGAAATGAAGCTGAAGGACTTGAAAGTGAAAATTTATCTTTTCCAAGCCATTGATCGCACAATTCTGAAGACCATTCTCAAGAAAAATACTGCAAAAGAAATATGGGATGCTATGAAGAAAAAGTATGAAGGAAATGCAAGAGTCAGGCGGTCTTATCTTCAAGCTCTTTGTAGAGAATTTGAAATTCTTGAGATGAAGTCTGGTGAAGGGGTGACAGAGTACTTCTCCAGAGTCATGATTGTGGCAAATAAGATGCGAACTTATGGTGAAGATATGCAAGATGTAAAAGTAGTTGAAAAAATCCTACGCTCCTTGACTGACAACTTTAATTATATTGTTTCTTCTATTGAAGAGTCAAAAGATCCCAACACTCTCACTATTGATGAATTACAAAGTTCTTTAATAGTACATGAACAAAAGTTTCAACGACGAGGTGGGGAGGAGCAAGCCTTGAAAGTGACAAATGATGAAGGAAGAGGTCGTGGTAGTGGCAGCTATAGAGGAAGAGGTCGGGGAACTTTCAACAAAGCCAATGTGCAGTGTTTTCGATGCCAAAAATTTGGATATTTTCAATATGAATGTTCTGAAAACAAAGAAGCAAACTATGCTGAATTTGATGAGGAAGAAGAAATGTTTTTGATGTCTTATGAGGAAAAACATGGAGTTCAAAGAGAAGATACATGGATTCTTGATTTTGGGTGTTCAAATCATATGTGTGGTGATCGATCAATGTTTAGTGATCTCAATGAAGATTTTCGACATTCAGTGAAATTGGGAAACAACACTAGAATGAATGTCATGGGCAAAGGAAATGTAAAGTTGCTCATAAATGGAGTTAATCACGTTGTTGCTGAGGTATATTACATTCCAGATTTAAGTAGCAACCTATTGAGCATAGGACAATTGCAAGAAAAAGGAATGTCGATTTTGATCAAGCGAGGAGAGTGCAAAATATTTCATCCAAAGATGGATTTGATTATTCAGATCAAGATGAGCAACAGTAGGATGTTTACTTTGCAAGCTCAAACTCAAATATCTTGGGGAATTGACAAAAATAGGCCAAAAATGGGGCAGATAAAGACTTTTAGGATTGATTGTAAAAAGGTTGACATTTAGGACAAATTGGAGGTGAAATGACGAAAATACCCTCATTTAATTTCAATTCACATTTAATTTCCTCCTTCCTCTTTTCTTCTTTTTACTTTTCTTCAACCCAAAAACAGAGAAGGCAGTTCAAAAAAAAAAAAAATGTAAACCTCCCGCATTTGAACTCTCCCGCCTCTGCAGTTACCACCTTCAACTTTGTGCCTTCGGTGAACGTTTTTCTCTTCCGTCCATTTCTTCTCCACTTCCATCCATTTCTTCTCCACGACTCTCCACTATATTTTCCGATTTCAACTTTTTCACCGAACGCCTCCATTTCTTCTGCACGAGTCTCTGTTTTAGTTTCAACTTCAACTTCGGTGAACGCTTCTCCACTTCCATCCATTTCGATTTCAGCTTTGTTTTCACCGGACCTCTCCATTTCTTCTCCACCCCTCTACGTTGGCAGTGCCATATCCATCCTCTTTGAAGTCAAGTGAGTAATAAAATCTCAGTTTTTTTTTTAAAGTTAGTCTGTTGAAGATATGTTTATCTATTATTAGAGTATCCATCTTGTTTGTTTAAGTTGTCTGTTGAGATATGATGTTTTGGGCACATTTTAGTTATATCATTAAATTTGTAGAGAAGAAATGCATGTCGTATGCACACAGACATAGAGAACCGTGGGAGCCATTATGTTTTTAGGAAGAAATACGATTTCCTTTGCAATGTACTGTAATAATAGATAATTGGGTTAAGAATGTATTATATATGTGCATGCTACAAATATATGTATATATACATACCTTGGAGTTTAGAACATGAATTCCAACATATTTGGTATCCCATCTAAACTCTGCAAAGCTACCAGTACAACAATGTTGAACAATGTTGAAAGACATTATCATAAGCTGCATTGTTGTTCTCTACTTTGTTAATGTTTTTAGTGATGTAGTTCCAATAGAATACAATCTTTGTTGCCTTGTATAACCAAGAAGCTCCCCATATTAATTTGTCCTATGTCAAACCAATTTATTTAAGATTCATATGTTAGAGAAAATTTGAAGACAAATGATTCAATTAGTTTTGTTCTTAAACATACATGTAGGCTTTCCTCCTCTATTAATCATTTTAGTAAAGGTGTTACAATATATGTTTAGCCGTGCATGCAATTTTGTTTAGTAATCTAATTTGGTTTATTGGCCTTTACTTGACCAAAATTTGAGTAGAAGTCCCAAGATGAGAGTGTTACCCTTCCTAAATCGTTTAGAATGCATGTTTAACTAGTTTACTGGGTGTTAAGGGTTTAGGGTTAGCAATTTTATTAGACTTAGCAAGTAATAGCTTCGAAATTTTCTATCTCGCACCTATCAACACCTATCTCGCACCTTTCGAAATTTGAGTAGAAGTACCAAGATGAGAGTGTTAACCTTCCTAAACCGTTTAGAATGCATGTTTAGCTAGTTTACTGGGTGTTAAGACGTTAGGGTTAGCAATTTTATTAGACTTAGCAAGTAATAGACTTGAATTTTTCCATCTCGCACCTATCACCACCTATCTCGCACCTTCCAAAATTTGAGTAGAAGTCCCAAGATGAGAGTGTTAACCTTCCTAAACCGTTTAGAATGCATGTTTAGCTAGTTTACTGGGAGTTAAGGCTTTAGGGTTAGCAATTTTATTAGGCTTAGCAAGTAATAACCTTGAATTTTCCATCTCGCACCTATCAGCAACTATCTCGCACCTTCCAAAATTTGAGTAGAAGTCCCAAGATGAGAGTGTTAACCTTCCTAAACCGTTTAGAATGCATGTTTAGCTAGTTTACTAGGAGTTAAGGCTTTAGGGTTAGCAATTTTATTAGACTTAGCAAGTAATAGCCTTGAATTTTTCCATTTCGCACCTATCAGCACCTATCTCGCACCTTCCAAAATTTGAGTAGAAGTCCCAAGATGAGAGTGTTAACCTTCCTAAACCGTGTAGAATGCATGTTTAGCTATTTTACTAGATGTTAAGGCTTTAGGGTTAGCAATTTTATTAGACTTAGCAAGTAATAGCCTTGAATTTTTCCATTTCGCACCTATCAGCACCTATCTCGCACCTTCCAAAATTTGAGTAGAAGTCCCAAGATGAGAGTGTTAACCTTCCTAAACCGTGTAGAATGCATGTTTAGCTATTTTATTGGATGTTAAGGCTTTAGGGTTAGCAATTTTATTAGACTTAGCAACTTTGCCTTCAATTTTTCTATCTCACACCTATCAACACCTATCTCGCACCTACCAAAATTTGAGTAGAAGTCTCAAGATGAGAGTGCATTCATGTTTAGTAAGTCTCTTATGCAATTATATTTAATTAGTTTTTTTTATGCAGGTTTTATTATGGCTTCGACATTAACTAACGGTCCCATGTACAAGATTGACCCTGCTCATCATTTTCAGTCTATAGTAAGCAGTTTATCTCATTTAGAAAACAGTACGCGTAAAATAAAGGCTAAATTGAAACCGGATCCATTAACCTTATTTAGAAATACAAAGTTTGGCCACTTTTTGGATCTTAATATAGTCTTTAATGGGCCGCTCATCCACTACTTATTGTTAAGGGAGGTGGAAGATGAAAGGGTTGATCATATCAGTTTCAAGATAGGGGAAGTTGTGTGCAGTTTTGGTAGGAGAGAGTTTAATATGATGACGGGTCTATGGAGTTCTCAACCAGAGCCTATTGAATTGGTTGGGAATAGTAGGTTGTTGGAGAAGTTCTTCGAACAAAAAAAGTGTATTTATATAAGTGACTTAGAGGACACATTTGTGGAATACGAGGGGGATGACGATGACGATGACATAGTTAAATTAGCTCTAGTGTACTTTATAGAGCTGTCATTGTTAGGAAAAGATAGGCGGACGAAAGTGGACCGAACTTTATTTAGGATTGCAGATGATTGGACCACATTTAACAATTACGATTGGGGAGGTTTGGTTTTTGGACGTACAATTTCTGCCTTAAAACGAGCCTTGGACATGCAACATGCCAAGGGAAAGAATAAATCAACTAAGACAAAATATACTGTCATGGGATTTCCGCAAGCGTTACAGGTATGTTACTTTACTTCCTATGCACATATTTATATATACATATATCTTGGGATACTTGCTAAACTTGTTTTGTCGAACATGGAATAGGTTTGGGCATATGAGTCTATACCAACCATCACTGAATGTGGTGTACATAAAGTAAGCAACGATGCAATACCACGAATGTTGAGGTGGGTGTGCGAACTATCACCAAAGTCTCATGTCCTACAGAGCCAAGTGTTTGACTCGCCAATGGTAAGTATCAACAAACAGTAACTTACCAAATGCATGACTTTGTTCCTTTATGTTTTGACTAACTAACTACATTTCCACTTTGTAGTTCATAATTAACGTGGTAATTGAGATGATGCCTGAAGAGGAGGAGCATCTAAGAATGTCTTCAGAGGAACTTGTTGAGAAATCCCATCCATCTAACACCGTTTCTGAGAAGAATGGTGATTCAAAACGACCAGGAGAAGCTAGTAATGATGACAATGACTGCAAAAAGAGTAAGAAAAAGAAGAAGTGGAAGTCTAAGATGAAAGAAGTTGTTCGAAAACTCAAATATCGAGTAGCGGTTCTCGAGAATGAACGTGGAAGCCTAAAATCAACGCTGTCGACTATATTGAAACACCTTGAAGTTCAAAAAAAGGTTAGGAATCAAAGTTTGTTTAACATTTTCAAAGTTTGTTTAACATTTTCAAAGTGTTCCTTACCAATACATTTTGACATTTCCAAAGGGTGAAGAAGGAGACTGCACGGGAGTTGAAGGTCATGATGCCCAGACCGAAGATGTTGACAAACCCGGTACACCTTCTTGGTTGTGGATGCCAAAGGAGGATGACACAAGTGATGTGGTGAAACACGTTGAACTTCAAAAAAAGGTTAGGAATCAAAGTTGTGTAATGGGGTGAAAATCATCCTTACTAATGCTTTATCCTTAGTAATTCATTTTGACCTTCCATAGGGTGTCGAAGCAAACCGCACGGAGGATGACACAATGGACGAGTTGGATAAGAAGGTTCATATTGATTTGGAGGAGCCAATAGACGTCGTTGACAATTTCAACGAGGAAATTGGAGTAAAATGTCTTACCTATTTTGATTCAGACGTCATGGAAATAGAACCATTATCCACTAAACGACCACACGTTCGACCCGCACGTAGCAAGCGTGCAAGTCACTTGTCAACCCCCTTCACAGCTTTAGTTAAACGGTCTACAAAATCAACCACCACCACCTCTCAGTCTCAACCATCCGTCTATGGTCCTATGCACAAGATACCTGACACCCATTTAGATCGACTCAGAGCTTGGATCACAGACAAGCGTACAAAAGATGAGGTGCGTGAAACTTTTCACGGGAAAAAATCGAAGGAATTTTTTCAGAGACTTGTTCATGTGTCGTCGGTGGTTGGCGGATGAGGTAAGGACTTTTCTTATTATTTCTTATTTACAGTTTTAGAGCACTTAGTAAAACCATGTTTGTTAACTAAAAATAGTATGTTCAAGAAGTTGGTTTGATCGCATAACCGAATTATATGTTTTCTTTTGTTTCTATTAGCATTTGGATGCACTCTTTCTTCTCATTCGCTTCAACATTAAGTCAGCCATGATACCTTCTGCTCAAAATTTCACAACTGTAGACACACTCTTCATGGTTTGTATTCGCAACCATACTTGATGTACTGAATTTGCTTTTGATATTTGTCTTATTGTCTTATTGTATTTGATATATATGCATGTGTGTTTTTTTTCCTTCCAGCGACTATTAGTTGCGAAGTGGCCTGAATACCAAGAATGTATTAAAGAGAATCGACCATTTCACTTGAAGGAGGAGTATCGATTGGTTGACTATGTTGTCGGATCAAAACAAGACTTTCAAGATCCTTGGGCGAATGTTGATTACATTTACTCTCCATTCAATATCCATGGCAATCATTGGATTCTATTATGCTTGGACTTGGTACGTTGTCAAGTTAAGGTATGGGATTCGCTTCCGTCGCTTACGAGTGCCGAAGATATGAGAAGCATATTAATGTCAATTCGAGAGATGGTGCCAAATTTGCTCGATACTACTGGATTCTTTGTTAGGAGAGGCGGATCATCAACACACAAGGAACCTTGGCCACTTGTCATTGTTGACTCCATTCCACTACAACGCAACAATAGTGATTGTGGTGTATTTACAATTAAGTATTTCGAATATGAAGCTTCTGGTTTAGATGTAGCTACATTATGTCAAGAAAACATGTCATATTTTAGAAAACAATTGGCATTTCAATTATGGACCAACAATCCCATGTATTGACTTTTAGTTCCAACTTTTGAAGGAATGGTATATGTTCCAAACTATGAACATAAATGGTTTTATATAATGGAATGAATACCATTGTTGTTTTATGGTATGAAATTTTTATTTCATTCTCTTGGGAAAATTGTAAAGTGTGCAGAACTTTTATATAATGTACTGCAGTGCAGGTGAGAGCAACATTCTCATGCTCTTAGAATTAGGAAGGCCAATTTATCACACGCTGTATGAAAATTTCACCTCTTTGAATGCTAATTGTTTTTTGCAGGTGTTTTAGAAACATTTTTGGATTTCTGATGTATGGATATAGGCATTCTTGACGCTTAAGTTGATTTTCTTAATTGTGTTAGTTGCTGAAAGTCACGAAAATGGAAAGTTTGTTCTGTCAGAATCCTGCTTTTAAATTAAACATTATTCTTTACAGCTTTGGAGTTGTTCTAATGGAAGTACCAACAGGAAAGAAGCCCATTTTCTAAGACACCTGCCAGGAAAGCAACAAGAAAGCAGAATGAGAGAACTAAAAGGTAATCTGAAAGAGATGGTAGATCCCAGCATATCATAGGCTCAGGTAGAGAACGTAGTCAAAGTGGTAAGGATCGAACTTCGCTACATGGCTAAGATTCCATCTACAAGGCCCTCCATGAAAATGGTGGTTCATATGCTTGAAGAGGTTGAACCTTGTAACTTTATTGACATTGTTGTCAAGAAAGAATGTGAAAACTAAAAGTAATCAGCAAGATTTGCATCATTACTACTGTAGTAGCAAAAGGAGAGCATTTATTGAGTTCTAAAGCACACAATATTCTTTACTTCTCACGGATGGTTCAAACATTATTCTTTACAGCTTTGGAGTTGTTCTAATGGAAGTACCAACAGGAAAGAAGCCCATTTTCTAAGACACCTGCCAGGAAAGCAACAAGAAAGCAGAATGAGAGAACTAAAAGGTAATCTGAAAGAGATGGTAGATCCCAGCATATCATAGGCTCAGGTAGAGAACGTAGTCAAAGTGGTAAGGATCGAACTTCGCTACATGGCTAAGATTCCATCTACAAGGCCCTCCATGAAAATGGTGGTTCATATGCTTGAAGAGGTTGAACCTTGTAACTTTATTGACATTGTTGTCAAGAAAGAATGTGAAAACTAAAAGTAATCAGCAAGATTTGCATCATTACTACTGTAGTAGCAAAAGGAGAGCATTTATTGAGTTCTAAAGCACACAATATTCTTTACTTCTCACGGATGGTTCAAACATTATTCTTTACAGCTTTGGAGTTGTTCTAATGGAAGTACCAACAGGAAAGAAGCCCATTTTCTAAGACACCTGCCAGGAAAGCAACAAGAAAGCAGAATGAGAGAACTAAAAGGTAATCTGAAAGAGATGGTAGATCCCAGCATATCATAGGCTCAGGTAGAGAACGTAGTCAAAGTGGTAAGGATCGAACTTCGCTACATGGCTAAGATTCCATCTACAAGGCCCTCCATGAAAATGGTGGTTCATATGCTTGAAGAGGTTGAACCTTGTAACTTTATTGACATTGTTGTCAAGAAAGAATGTGAAAACTAAAAGTAATCAGCAAGATTTGCATCATTACTACTGTAGTAGCAAAAGGAGAGCATTTATTGAGTTCTAAAGCACACAATATTCTTTACTTCTCACGGATGGTTCAAACATTATTCTTTACAGCTTTGGAGTTGTTCTAATGGAAGTACCAACAGGAAAGAAGCCCATTTTCTAAGACACCTGCCATGAAAGCAGAATGAGATATCTAAAAGGTAATCTGAAAGAGATGGTAGATCCAAACATATCATAGGCTCAGGTGGAGAACGCAGTCAAAGTGGTAAGGATCGCACTTCGCTGCACGACTAAGATTCCATCTACAAGGCCCTCCATGCAAATGGTGGTTCATATGCTTGAAGAGGCTGAACCTTGTAACTTTATTGACATTGTTGTCAAGAAAGAATGTGAAAACTAAAAGTAATCAGCAAGATTTGCATCATTAATACTGCAGTAGCAAAAGGAGAGCATTTATGGAGTTTAGTGTTAGGTCATAATAGGATTTCAAGTCTTTCTCAAAAAGCTTGAAATGCCAAAGGAGAGCATTTATGTTAAAAACGACCTCCTGCTTTAGCTATGAAGTTCTACCTTATTCAAACTTTACAGAAAGATGAGATTAAAGTGAAAAATATTCCTTAAACTCAAGAGCACGGCTGTATAGAAACTTGTGACACGGTTGTACAATTTATAGAACAGATTCAAATCAAATAAGGGCATAAAACAAAATATACACTCAGAAATTCATATTCTGCACAAGTTTGCAGTCAACAGAAATTTATAGAACAGATGCCAAAGGAGAGCATTTCTGTTAAAAACCAAATACCATATAAAATGGTTGTTAAACGCAACGTAATACAAACATTGTAAAAAAAAATACAATGAGTAAATATTCTATAAACAGTTTACAGTAGGATAAATAAAAAGAGAAGGAAAGTCTTGAAGTTGAAGAAGAAAAGTCTTCAACTTAGAATTGTCAGTGAGATGACTTTAGTGATCTTGCAAACAACACAAGACACAATTTTATAAGCATCTTCCACCTGCATTAAAACAATGAACCTTTTTTACATCGTGATCATGCAAACAACTCAAGCACAAACCAAGAAAGTATAAAACTATTACTACGTACCAAGACGGGTACTAATCTTGTATGCTCGACTTCTGAATGTATGAAATTGGATTGGTACATGTTAATCTATTGTGACCTGTTTCTTTACATCGACCACATTTATGCAATTTTGGTGCTTCACCGACACTTGGAATCCTATTTTACTTCGGTCGACCAACTCTTTTCACTACTTTCGGAGGTAAGATAGTCATATGTACATATTCTTCAGTTGTCTTCCATTCCGATTAATTCCCAACTGGGTAGATGGCGTCTGAATATGCTGCCAACAAACATTCATTAGTGTAATAGTTAGCACATAAGCTATAAACATTTATATTGCAATCCCGTGCAACAGCAATGACATGTGCGCATGGTAGTTGCTCAGCTTGAAACTCCTTACAAGTGCACTCTTGAGTATGAAGATTTACGACCTCCTCTTTATCTAAATCTTTAACATGGCACTAGAAGAAAACTACCCTACAATGACAGTTATATATCTCAAAAAATGAATGGAAGAAAAAAAAACTGTCACGAAATATAAAATTTCGCGTTTTTGGCGGGAAAAGACGGAATTTTTCGGAAAACACTTTTCGTGACAGTTATTAACTGTCATAGAATGTTAGGGTTAAAATTTTTTTCTTTTTTCCTTTTCTTTTCTTTTTCCTTTTTCTTTCTTTTCCCTATTTCCTTCTTCCTCCCCGTGCGTCCTTCCCCTTCTCCCCAGCCGCAACCGCCGCGCCTCTTCTCCTTCCTCTCGTACGCCGCGACGACTCCACCGTCTCCTTCTCCTTTCCTTCTCTTTTCTCTTTTCCTTCCGCCGTTCCCTTCCGTCTTTCTTTCCGCCGCAGCCCAGCCGCCCCATCCTTCCCCTTCTCTCCGTTCGCGAAGCAAAACCGCCACCGCTCCGCCGGTAAGCTTCTCTTCCTTATCTCTTTCTCTCTCTCTCTCTCTCTATGAAGTTCTTCATTGTCTCCATTGGATTGTTTCTTGATTTCAGTTTATCCCAATTTCATTGGATTGTTTCGCCGGTAAGATCTTATCCTCATTTCCAAAAGAGATGTCATGGCTAGTGTCGATTTCTTTGCAATCTTTAAAATTATTTTCTTTGTTTTCAAGAATTTGTGTAGGTTGGTGATGAAACATTTTGGTAGCTTACAATGTGTTTGATGAAATGCCTCAATGAAGCATTTGGTTGATTTTTGATTGATTTTTGTTCGTTCGAATTAGGAAATCAAGGCCAAAGGAGATGTCATGGCTATGGGCTGAAGCTTTGAGAAAAAAAGAATGAAAAATGAAATGTGAGATCTTAAACTTTGTACTTTGCCTTAAGTTGTGTCAAACTAGTCAATAAAGTAACTTAACTACCAATTTGCCTTTAAGTGCCGGGTTGTTGGGATTTGTTTGCTGTAATTTGTCTAGGGTTATGTGTGTTTGTGATGTGTTGTTAGTGAGTATGTTGAATTTTGTGTTCGAGCTTCCAGATGTGAAACATTTTGGTAGCTTACAATGTGTTTGATGAAATGCCTCAATGAAGCATTTGGTTGATTTTTGATTGATTTTTGTTTGTTCGAATTAGGAAATCAAGGCCAAAGGAGATGTCATGGCTATGGGCTGAAGCTTTGAGAAAAAAAGAATGAAAAATGAAATGTGAGATCTTAAACTTTGTACTTTGCCTTAAGTTGTGTCAAACTAGTCAATAAAGTAACTTAACTACCAATTTGCCTTAAGTGCCGGGTTGTTGGGATTTGTTTGTTGTAATTTGTCTAGGGTTATGTGTGTTTGTGATGTGTTGTTAGTGAGTATGTTGAATTTTGTGTTCGAGCTTCCAGATGTGAAGTATATAAAATGTTATTTGTAATTGTTTTAAACTTGAAACGCCTTTGATATTTGTTATTCTCTTGTGTCATATGATTATGTTTCAGGACATCTACTGATTAAAATCATGAGACCTCATGCATACGTGTATACGCATAGTTATTATATTTAAAAGTTATGATTTTGGTAATCATCATCATGGGTAAAGTTTCAGTAGTGGTTTACATGACACCAAGAGTTAAGATTAAAGAGAAAACGAGTGAGTTGTACACTTATAGAATGGTATTACTTTGGTTTAAGGACTTGTGAATGATCTATATGTTTTCTTTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCCAGCCTATTTTTCGAGGTTAGAACCTTTTCATTGCACTGTCGTAATCTGGAATTTTTAAGGTACAATGTTTTCTAATTTTTATTTTTAATTAGATATAGGATGATAACATTTTGGTTTTATTCTTGTGGTGTATAACTTATAAGGATGTTTTAACTATCCTTTTGCTTTTCATTATATTACTTTCCTATATGGCCTTCTCATCATGTTTGTACATTGCGATCATATTTTTCCACTCATTGATATTTTTTTCTCTAATTCCAGTGCAGAAAACATAAAGATCTTTATCTATGTATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCATTTGTTTTCTCTATTGTTGATGACCATATCTGGTTCTGGAATTACCAGGTATGCTTTATTTATTTCCTACTTGCTACAGAATTTAATACTAACCATGATCATGCTTTATTTATAACCATCACTCTGTTAGCAACACCACTTGAGGAACAATGCGTGTTTTTAGTGAAGTACGTTAAGATATATATAGATAAATGTCAGAAGTGTCGTTCTTAAGATATGAGGCATACAATCGTCATTAGGAAAGGAATTTGGCATGGCAAAAAATTAATTGATTTGAAGAGTTTGAGATTAAGCAAATTTTGGGGAATAGTTTTTAGGAGTCCTAGTTGGGGATCTTGCTATTTTTCTTTCTTATGTCAATGATTTCATTGTTTTTCTAGTTCACTGTATACATTTCCATATAA

mRNA sequence

ATGGCGTCACAAGGCTCTGTGATTTCTGTATTCTCTATTTCCTTGCCATCACTGAACGGTTCATCGGCCTCGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCCAGCCTATTTTTCGAGTTCACTGTATACATTTCCATATAA

Coding sequence (CDS)

ATGGCGTCACAAGGCTCTGTGATTTCTGTATTCTCTATTTCCTTGCCATCACTGAACGGTTCATCGGCCTCGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCCAGCCTATTTTTCGAGTTCACTGTATACATTTCCATATAA

Protein sequence

MASQGSVISVFSISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFEFTVYISI

Homology

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BLAST of CsGy3G020530 vs. NCBI nr
Match: XP_008450669.1 (PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450671.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 6.8e-06
Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      DNKVESRSSKGATLNELVELKGCSSSLFFE
Sbjct: 74  LNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFE 115

[Close]

BLAST of CsGy3G020530 vs. NCBI nr
Match: XP_022159792.1 (ribosome biogenesis protein BRX1 homolog 1-like [Momordica charantia])

HSP 1 Score: 58.9 bits (141), Expect = 6.8e-06
Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      DNKVESRSSKGATLNELVELKGCSSSLFFE
Sbjct: 74  LNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFE 115

[Close]

BLAST of CsGy3G020530 vs. NCBI nr
Match: XP_022961481.1 (ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_022961482.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_022961484.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_022961485.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata])

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-05
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      DNKVESRS+KGATLNELVELKGCSSSLFFE
Sbjct: 74  LNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFE 115

[Close]

BLAST of CsGy3G020530 vs. NCBI nr
Match: XP_022968762.1 (ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita maxima] >XP_022968763.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita maxima] >XP_022968764.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita maxima])

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-05
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      DNKVESRS+KGATLNELVELKGCSSSLFFE
Sbjct: 74  LNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFE 115

[Close]

BLAST of CsGy3G020530 vs. NCBI nr
Match: XP_023515692.1 (ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo] >XP_023515694.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-05
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      DNKVESRS+KGATLNELVELKGCSSSLFFE
Sbjct: 74  LNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFE 115

[Close]

BLAST of CsGy3G020530 vs. TAIR10
Match: AT3G15460.1 (Ribosomal RNA processing Brix domain protein)

HSP 1 Score: 47.4 bits (111), Expect = 3.7e-06
Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      D+KVE++SS+GATLNEL+ELKG SS LFFE
Sbjct: 72  LNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFE 113

[Close]

BLAST of CsGy3G020530 vs. TAIR10
Match: AT1G52930.1 (Ribosomal RNA processing Brix domain protein)

HSP 1 Score: 45.1 bits (105), Expect = 1.9e-05
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      D+KVE++SSKGATLNEL+ELK  +S LFFE
Sbjct: 76  LNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFE 117

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BLAST of CsGy3G020530 vs. Swiss-Prot
Match: sp|Q9LE16|BRX11_ARATH (Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-1 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 6.7e-05
Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      D+KVE++SS+GATLNEL+ELKG SS LFFE
Sbjct: 72  LNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFE 113

[Close]

BLAST of CsGy3G020530 vs. Swiss-Prot
Match: sp|Q9C928|BRX12_ARATH (Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-2 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 3.3e-04
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      D+KVE++SSKGATLNEL+ELK  +S LFFE
Sbjct: 76  LNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFE 117

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BLAST of CsGy3G020530 vs. TrEMBL
Match: tr|A0A1S3BQS3|A0A1S3BQS3_CUCME (ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.5e-06
Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      DNKVESRSSKGATLNELVELKGCSSSLFFE
Sbjct: 74  LNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFE 115

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BLAST of CsGy3G020530 vs. TrEMBL
Match: tr|A0A0A0M1K6|A0A0A0M1K6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570210 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.2e-05
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      DNKVE RSSKGATLNELVELKGCSSSLFFE
Sbjct: 74  LNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFE 115

[Close]

BLAST of CsGy3G020530 vs. TrEMBL
Match: tr|A0A0B0NEE6|A0A0B0NEE6_GOSAR (Ribosome biogenesis BRX1 OS=Gossypium arboreum OX=29729 GN=F383_18642 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-05
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      DNKVESRSSKGATLNEL+EL+GCSS+LFFE
Sbjct: 76  LNMVSLLPHCKKDNKVESRSSKGATLNELIELRGCSSALFFE 117

[Close]

BLAST of CsGy3G020530 vs. TrEMBL
Match: tr|A0A1U8LTD4|A0A1U8LTD4_GOSHI (ribosome biogenesis protein BRX1-like OS=Gossypium hirsutum OX=3635 GN=LOC107929693 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-05
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      DNKVESRSSKGATLNEL+EL+GCSS+LFFE
Sbjct: 76  LNMVSLLPHCKKDNKVESRSSKGATLNELIELRGCSSALFFE 117

[Close]

BLAST of CsGy3G020530 vs. TrEMBL
Match: tr|A0A0D2SNA9|A0A0D2SNA9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G319600 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-05
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 13  ISLPSLNGSSASDNKVESRSSKGATLNELVELKGCSSSLFFE 55
           +++ SL      DNKVESRSSKGATLNEL+EL+GCSS+LFFE
Sbjct: 76  LNMVSLLPHCKKDNKVESRSSKGATLNELIELRGCSSALFFE 117

The following BLAST results are available for this feature:

BLAST of CsGy3G020530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450669.1	6.8e-06	76.19	PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 ...	[more]
XP_022159792.1	6.8e-06	76.19	ribosome biogenesis protein BRX1 homolog 1-like [Momordica charantia]	[more]
XP_022961481.1	1.5e-05	73.81	ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_0229614...	[more]
XP_022968762.1	1.5e-05	73.81	ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita maxima] >XP_022968763...	[more]
XP_023515692.1	1.5e-05	73.81	ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of CsGy3G020530 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15460.1	3.7e-06	59.52	Ribosomal RNA processing Brix domain protein	[more]
AT1G52930.1	1.9e-05	57.14	Ribosomal RNA processing Brix domain protein	[more]

BLAST of CsGy3G020530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LE16\|BRX11_ARATH	6.7e-05	59.52	Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
sp\|Q9C928\|BRX12_ARATH	3.3e-04	57.14	Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]

BLAST of CsGy3G020530 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQS3\|A0A1S3BQS3_CUCME	4.5e-06	76.19	ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE...	[more]
tr\|A0A0A0M1K6\|A0A0A0M1K6_CUCSA	2.2e-05	73.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570210 PE=4 SV=1	[more]
tr\|A0A0B0NEE6\|A0A0B0NEE6_GOSAR	2.9e-05	69.05	Ribosome biogenesis BRX1 OS=Gossypium arboreum OX=29729 GN=F383_18642 PE=4 SV=1	[more]
tr\|A0A1U8LTD4\|A0A1U8LTD4_GOSHI	2.9e-05	69.05	ribosome biogenesis protein BRX1-like OS=Gossypium hirsutum OX=3635 GN=LOC107929...	[more]
tr\|A0A0D2SNA9\|A0A0D2SNA9_GOSRA	2.9e-05	69.05	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G319600 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G020530.1	CsGy3G020530.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G020530	Cucurbita maxima (Rimu)	cgybcmaB308
CsGy3G020530	Cucurbita maxima (Rimu)	cgybcmaB368
CsGy3G020530	Cucurbita moschata (Rifu)	cgybcmoB281
CsGy3G020530	Cucurbita moschata (Rifu)	cgybcmoB339
CsGy3G020530	Cucurbita pepo (Zucchini)	cgybcpeB380
CsGy3G020530	Cucurbita pepo (Zucchini)	cgybcpeB397
CsGy3G020530	Watermelon (97103) v1	cgybwmB223
CsGy3G020530	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G020530	Bottle gourd (USVL1VR-Ls)	cgyblsiB190
CsGy3G020530	Bottle gourd (USVL1VR-Ls)	cgyblsiB199
CsGy3G020530	Melon (DHL92) v3.5.1	cgybmeB212
CsGy3G020530	Watermelon (Charleston Gray)	cgybwcgB208
CsGy3G020530	Melon (DHL92) v3.6.1	cgybmedB216
CsGy3G020530	Watermelon (Charleston Gray)	cgybwcgB217
CsGy3G020530	Watermelon (97103) v1	cgybwmB232
CsGy3G020530	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G020530	Silver-seed gourd	carcgybB0488
CsGy3G020530	Silver-seed gourd	carcgybB0489
CsGy3G020530	Silver-seed gourd	carcgybB0757
CsGy3G020530	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G020530	Watermelon (97103) v2	cgybwmbB201
CsGy3G020530	Watermelon (97103) v2	cgybwmbB209
CsGy3G020530	Wax gourd	cgybwgoB259
CsGy3G020530	Wax gourd	cgybwgoB289
CsGy3G020530	Wax gourd	cgybwgoB290