CsGy3G019120 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTAAAAAGGCAATAGAAGATGTTGGTGATGATTATTTCAAAGAACTACTAGGGAGGTCATTTTTTCAAGACATAAGAAAAAACAAATGGGGAGAGATCAAGAAGTTCAAGATGCATGACATTATACACGATTTTGCATGGTCTGTTGTACACTAAGTTCAAGATGCATGACATTATACACTAAGTCCATAGACAAAAGGACTCAACATGTGTCAATTTGGGCTTTCATCTCAATGACAAGATGGAAACTCATTGCATAATCATTAATAGAGGCAAAGAATTTGAGAAGATTGAACTGTGCTCGTGAAGAAATCAACCTATCTAGTAATTTGCAGTTACGAACATTGAATTTGGAGTTTCCTTTTCATGTTTCCAAGTGTATTGGTAAGATGAAATATTTTAGATATATTAATATTACATATTGTAGTATTGTTTTCCTTCCCAAGGTAGTTACACAATTGTACCATTTCGACATGTCTACTATGACATTTGTGTATATCACAAAATGGAGAGAGGAAAAAAAACTGTCACAAAATGTAAAATTTCGCATTTCTAATAGAAAAAGACGAAATTTTTCAGATAATACATTCGGCGACAGTTATTTGATGTCATAGAAAAAAACATAAAATAATATTTTATTTTTTATTAAAAAATAATAAATAAAGATTAGAAATTTAGAAAATATTTGCCCAAATTCTAAACCCTTATTATTTTCTTCAATTCTCGCGCGAAGTATCCATCTCCAATTTGACCGTCTTCCGGCCCCGTCCCCATCCGCCCCTATTTGTGACCATCTGTTCACTTCGGCGTGGCCGTCTATTTGCTTCGACGTGCCGATCTGTTCACTCCATCGCTGCCATTAACGAACAACGAAACCCCCGCAATCCCTGCGCAATCTCCAAACCTTTTCAATTCGTTCCCGTCTTCTTCGGCGCTGCCATTCGTGCCCCTCTTCTTCGTCGCTGCCATTCGTGCCCCTCGTCACCTCCTCTGCTGGTAAGCTTCTATTCTTTCTCTCTTTGTTCCTCTCTCTGTGACGGTTTGATTCTGTGTTGATAGTGTACATTGAAATTTAATTTTATTTATCGAAAGTCCCATTGACTGGCTCCAATTTCCAATATGGTTGACCCAATCCAATTTCTATTTCAAATCTAGATCTACCCTTCGTCCCTAGACCTTAGCTTTTGTTCTATTTCAAATCCATACACACACACCCAAGTTTCATGTGTTCATGGATGGGGGATGTATTAAATATTATTACAATAACCAACATATATAGTAGTAGTACTAGTGCTATGTGGAGTTAACATACAAATCATTGGATGTTATTAGAAACTAATTATGCCAAGTTTATATGTTGTTGTAGGATAGATTTGATTTTGAATATAATGAAATGGAATGAGTTGTTGCAATATATTCTGTAA ATTAAAAAGGCAATAGAAGATGTTGGTGATGATTATTTCAAAGAACTACTAGGGAGGTCATTTTTTCAAGACATAAGAAAAAACAAATGGGGAGAGATCAAGAAGTTCAAGATGCATGACATTATACACGATTTTGCATGGTCTGTTGCAAAGAATTTGAGAAGATTGAACTGTGCTCGTGAAGAAATCAACCTATCTAGTAATTTGCAGTTACGAACATTGAATTTGGAGTTTCCTTTTCATGTTTCCAAGATAGATTTGATTTTGAATATAATGAAATGGAATGAGTTGTTGCAATATATTCTGTAA ATTAAAAAGGCAATAGAAGATGTTGGTGATGATTATTTCAAAGAACTACTAGGGAGGTCATTTTTTCAAGACATAAGAAAAAACAAATGGGGAGAGATCAAGAAGTTCAAGATGCATGACATTATACACGATTTTGCATGGTCTGTTGCAAAGAATTTGAGAAGATTGAACTGTGCTCGTGAAGAAATCAACCTATCTAGTAATTTGCAGTTACGAACATTGAATTTGGAGTTTCCTTTTCATGTTTCCAAGATAGATTTGATTTTGAATATAATGAAATGGAATGAGTTGTTGCAATATATTCTGTAA IKKAIEDVGDDYFKELLGRSFFQDIRKNKWGEIKKFKMHDIIHDFAWSVAKNLRRLNCAREEINLSSNLQLRTLNLEFPFHVSKIDLILNIMKWNELLQYIL
BLAST of CsGy3G019120 vs. NCBI nr
Match: XP_008450703.1 (PREDICTED: putative disease resistance protein RGA4 [Cucumis melo]) HSP 1 Score: 109.8 bits (273), Expect = 5.7e-21 Identity = 61/125 (48.80%), Postives = 74/125 (59.20%), Query Frame = 0
BLAST of CsGy3G019120 vs. NCBI nr
Match: KGN47681.1 (hypothetical protein Csa_6G375730 [Cucumis sativus]) HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20 Identity = 65/122 (53.28%), Postives = 71/122 (58.20%), Query Frame = 0
BLAST of CsGy3G019120 vs. NCBI nr
Match: XP_011658447.1 (PREDICTED: disease resistance protein RGA2-like [Cucumis sativus]) HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20 Identity = 65/122 (53.28%), Postives = 71/122 (58.20%), Query Frame = 0
BLAST of CsGy3G019120 vs. NCBI nr
Match: XP_016900955.1 (PREDICTED: putative disease resistance protein RGA3 [Cucumis melo]) HSP 1 Score: 105.9 bits (263), Expect = 8.2e-20 Identity = 66/137 (48.18%), Postives = 76/137 (55.47%), Query Frame = 0
BLAST of CsGy3G019120 vs. NCBI nr
Match: XP_008465509.1 (PREDICTED: putative disease resistance protein RGA1 [Cucumis melo]) HSP 1 Score: 93.6 bits (231), Expect = 4.2e-16 Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of CsGy3G019120 vs. TAIR10
Match: AT3G07040.1 (NB-ARC domain-containing disease resistance protein) HSP 1 Score: 45.1 bits (105), Expect = 3.1e-05 Identity = 22/46 (47.83%), Postives = 29/46 (63.04%), Query Frame = 0
BLAST of CsGy3G019120 vs. Swiss-Prot
Match: sp|Q7XBQ9|RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.1e-05 Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of CsGy3G019120 vs. Swiss-Prot
Match: sp|Q7XA40|RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2) HSP 1 Score: 45.4 bits (106), Expect = 4.3e-04 Identity = 27/68 (39.71%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of CsGy3G019120 vs. Swiss-Prot
Match: sp|Q39214|RPM1_ARATH (Disease resistance protein RPM1 OS=Arabidopsis thaliana OX=3702 GN=RPM1 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.6e-04 Identity = 22/46 (47.83%), Postives = 29/46 (63.04%), Query Frame = 0
BLAST of CsGy3G019120 vs. Swiss-Prot
Match: sp|Q7XA42|RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2) HSP 1 Score: 44.3 bits (103), Expect = 9.5e-04 Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 0
BLAST of CsGy3G019120 vs. TrEMBL
Match: tr|A0A1S3BPS1|A0A1S3BPS1_CUCME (putative disease resistance protein RGA4 OS=Cucumis melo OX=3656 GN=LOC103492203 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 3.7e-21 Identity = 61/125 (48.80%), Postives = 74/125 (59.20%), Query Frame = 0
BLAST of CsGy3G019120 vs. TrEMBL
Match: tr|A0A0A0KIT2|A0A0A0KIT2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G375730 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20 Identity = 65/122 (53.28%), Postives = 71/122 (58.20%), Query Frame = 0
BLAST of CsGy3G019120 vs. TrEMBL
Match: tr|A0A1S4DZ06|A0A1S4DZ06_CUCME (putative disease resistance protein RGA3 OS=Cucumis melo OX=3656 GN=LOC103492522 PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 5.4e-20 Identity = 66/137 (48.18%), Postives = 76/137 (55.47%), Query Frame = 0
BLAST of CsGy3G019120 vs. TrEMBL
Match: tr|A0A1S3CNY8|A0A1S3CNY8_CUCME (putative disease resistance protein RGA1 OS=Cucumis melo OX=3656 GN=LOC103503129 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.8e-16 Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of CsGy3G019120 vs. TrEMBL
Match: tr|A0A1S3CEG6|A0A1S3CEG6_CUCME (disease resistance protein RGA2-like OS=Cucumis melo OX=3656 GN=LOC103499950 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.1e-15 Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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