CsGy3G019110 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G019110
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Description30S ribosomal protein S3, chloroplastic
LocationChr3 : 15315198 .. 15317575 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGTTCCAATAAGATTTCATTCTTGAAGAAAAATCCATTTATTTATTTATTTCATCTCGAAAAATCGAAGAATTACAGATTAATGTACAAAAAGAATTCAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCAGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACCCCCTCCCCCCCCCCCCCCCCCAATTTTCTATTCAACCCCCTCGTCAAATTTGAAATTAATTCATAAATCCAAGAAACACTTGAAATTCAAAAATCTTATTCCTAAAACAAATTTATAATCTAAATAATTAAAAGAAATTCAAAATCAAAATTGCCCTAAACTAAAAATAAACTAAAATAAAACTAAAACTAAACTACTTATTGGAAATAGGTGCAACGGCAGCAGATGATGACATACAAAGAAACGACAATAGGCGGTGAAACTCGACAAATCCTTCTTCTCTTTCGATTTCGTCTCTCTTTCTTTCCCTTATGTGAGTTCTGTGATTTACAGAACTAAAAGGGTTTATGTGTGGGGCACTTCTGACGCACATCGAAAACGTCAGGAAACACAACCACTCCTGATGCTTTACATAAAGCGTCAGGAGTAAAGTCCTCAAACACCGACGTTTCAGTTATGGCGTCGGAAGTATGCACAAACTTTCCCAATGCCATGCAACGACGTCAAAAGAAATGTCATTTATTATTTAATCCGTCCATTTTTCCTAACGCAATGATGTAGTCCGTTGAAAATAGGGTCCTACTTTCAACGTCTGCCTGGGTACGGTTGGGGATGGTTGAACAATTAAATAATATATTTCACTTTTCACGTAGCCAGCCCCGGCGCTACTAATTACATCGTCGAAAAACAACAACACTGCTGATGGTAACATTTCAACGTTGCTAGATTTGCCTATCCTTGACGTTCCTATTGACGACATCCTCGACGGTGTTGGAAGAACTCCGATTTCTTATAGTGTAGGGATTCCACCTAAGGGAATGTAATGCTTTTTGGAAAATTCGATATCACATGCTATTGAATTAGAACAAATAAGAACCTTAGGATAATTTAATCGGTAGGTTCAATTAATTTGGTTAGGTTGAAGATTACCTATTGGTAAGTAATGATAGTCGTTTGATGAATGAATTCTTTGGACAAGAGAGAAACTGTAACAACCCAGCTAGATTTTTTTAATATAAGATTTTTACAAGCTTTATTTTTTTTCTTTGCAATTTAATTTCTGACATCAATTTCAACTTAAACCCCACATTCACGTGGTTGAAAATTAGTTTAATTTGTTTGAGAATTTGCACTATTGTGCTTCCCGTGATCAACCCAAACTTGCCACTAAGACTAGTGTCGGGTGAATTCAGTTAATTATTTGACACGTCTGAGTTTGGGTGATGAAACCCGTTAGTCAAAGATGATCCAATTAAAACAATTTGTGAGAGATGGACAACATGAAGGAACAACCCATGGATTAGGTGTCACTTTTACAAAATACATCTTTATATTGTATCTACTTTTATTTTTGTCAAATTGTTTATGTTACACAATCAACAGAAAAGCAAAAACAAAAAACGTAAAGACATACAGATATACGTTGTTCATAATAGTGTGGTAGCTATGTCCACAGAGTAGAGGATGAACAAATATTATTAGAGAGAATGTTTCAGATTACAAAATGTCACCAGTAGATTAGAGAGTTTATATATTGCACTCTTTTGAACTCTAGGGCCAAAATCGTAAATAGCTCATAAATAAGTACATGTGCTCTATTATGAAAACCAAAGAGCTTTCTAGGGCGTTACCCCCAAACACACACTAGGAAGTCCGTTACCCCCTGAACCTTGATCAACAAGACTTCCGTACTAGGTTGTTCGTAAGGCTACACATAACGAATTCTAGACATTCCAACAGTTCAGATATATATATCTTGGATGATTTTGTTTATGATGCTAGCTATAATTATATCGTTGTTGGTGTAGATTTTGAATAGAGTCACATGGTTTTTACTCCATTTTTTAGGTTGTTGTTCACATTTAAATTGTCATTGTTGTGTACCTGTGTATATTATTTTCAATAGTGCAGGATTAAAATAATTCCTAGCACTTAAACAGAAGGAATAGTTTGTTCGTAAATTGTATCCAAAGTCTTGCACTCACTATTAAATAAACTTCAGGGGGGAAGGAAATAGAGATTACCCAAAACAATGTTGTTTTGTTTGATATTTTAACTTCAGTTGTCACATTAGAAAATCTGATGAAATCTTTCCTAATAGAACTGAGATGA

mRNA sequence

ATGGACAAAAAATCCATTTATTTATTTATTTCATCTCGAAAAATCGAAGAATTACAGATTAATGTACAAAAAGAATTCAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCAGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGTTGTCACATTAGAAAATCTGATGAAATCTTTCCTAATAGAACTGAGATGA

Coding sequence (CDS)

ATGGACAAAAAATCCATTTATTTATTTATTTCATCTCGAAAAATCGAAGAATTACAGATTAATGTACAAAAAGAATTCAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCAGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGTTGTCACATTAGAAAATCTGATGAAATCTTTCCTAATAGAACTGAGATGA

Protein sequence

MDKKSIYLFISSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAVVTLENLMKSFLIELR
Homology
[Close]
BLAST of CsGy3G019110 vs. NCBI nr
Match: YP_009346519.1 (ribosomal protein S3 (chloroplast) [Cucumis x hytivus] >AOW71130.1 ribosomal protein S3 (chloroplast) [Cucumis x hytivus])

HSP 1 Score: 132.1 bits (331), Expect = 9.8e-28
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 12  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 71
           SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA
Sbjct: 89  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 148

Query: 72  IELTEQA 79
           IELTEQA
Sbjct: 149 IELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. NCBI nr
Match: YP_247638.1 (ribosomal protein S3 [Cucumis sativus] >YP_009004081.1 ribosomal protein S3 [Cucumis hystrix] >Q4VZN0.1 RecName: Full=30S ribosomal protein S3, chloroplastic >CAJ00797.1 ribosomal protein S3 (chloroplast) [Cucumis sativus] >AAZ94688.1 ribosomal protein S3 (chloroplast) [Cucumis sativus] >ABI97455.1 ribosomal protein S3 (chloroplast) [Cucumis sativus] >ABI98784.1 ribosomal protein S3 (chloroplast) [Cucumis sativus] >AHJ61423.1 ribosomal protein S3 (plastid) [Cucumis hystrix] >ALF03340.1 ribosomal protein S3 (chloroplast) [Cucumis sativus var. hardwickii] >ANF28415.1 ribosomal protein S3 (chloroplast) [Cucumis sativus var. hardwickii] >ARQ16117.1 ribosomal protein S3 (chloroplast) [Cucumis sativus] >ARQ16200.1 ribosomal protein S3 (chloroplast) [Cucumis sativus] >ARQ16283.1 ribosomal protein S3 (chloroplast) [Cucumis sativus] >ARQ16366.1 ribosomal protein S3 (chloroplast) [Cucumis sativus] >ASY97455.1 ribosomal protein S3 (chloroplast) [Cucumis sativus var. hardwickii] >AVE15370.1 ribosomal protein S3 (chloroplast) [Cucumis sativus var. sativus])

HSP 1 Score: 132.1 bits (331), Expect = 9.8e-28
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 12  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 71
           SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA
Sbjct: 89  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 148

Query: 72  IELTEQA 79
           IELTEQA
Sbjct: 149 IELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. NCBI nr
Match: YP_009456184.1 (ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM88705.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM88995.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89054.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89113.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89172.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89231.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89290.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89350.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89409.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89468.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89527.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89587.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89646.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89705.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89764.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89823.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89882.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM89941.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90000.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90059.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90118.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90177.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90236.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90295.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90354.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90413.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90472.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90531.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90590.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90649.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90708.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90767.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90826.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90885.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM90944.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM91003.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM91062.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM91295.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AUJ21949.1 ribosomal protein S3 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 12  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 71
           SRKIEELQ+NVQKE NSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA
Sbjct: 89  SRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 148

Query: 72  IELTEQA 79
           IELTEQA
Sbjct: 149 IELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. NCBI nr
Match: AHM88764.1 (ribosomal protein S3 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 12  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 71
           SRKIEELQ+NVQKE NSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA
Sbjct: 89  SRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 148

Query: 72  IELTEQA 79
           IELTEQA
Sbjct: 149 IELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. NCBI nr
Match: AHM88937.1 (ribosomal protein S3 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 12  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 71
           SRKIEELQ+NVQKE NSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA
Sbjct: 89  SRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 148

Query: 72  IELTEQA 79
           IELTEQA
Sbjct: 149 IELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. TAIR10
Match: ATCG00800.1 (structural constituent of ribosome)

HSP 1 Score: 114.4 bits (285), Expect = 3.8e-26
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 13  RKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAI 72
           R++EELQ+NVQKE N  NRKLNIAITRI NPYG PNILAEFIAGQLKNRVSFRKAMKKAI
Sbjct: 90  RRVEELQMNVQKELNCVNRKLNIAITRISNPYGDPNILAEFIAGQLKNRVSFRKAMKKAI 149

Query: 73  ELTEQA 79
           ELTEQA
Sbjct: 150 ELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. Swiss-Prot
Match: sp|Q4VZN0|RR3_CUCSA (30S ribosomal protein S3, chloroplastic OS=Cucumis sativus OX=3659 GN=rps3 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.2e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 12  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 71
           SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA
Sbjct: 89  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 148

Query: 72  IELTEQA 79
           IELTEQA
Sbjct: 149 IELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. Swiss-Prot
Match: sp|A0ZZ73|RR3_GOSBA (30S ribosomal protein S3, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps3 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.4e-27
Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 13  RKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAI 72
           RK+EELQ+NVQKE N  NRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAI
Sbjct: 90  RKLEELQMNVQKELNCMNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAI 149

Query: 73  ELTEQA 79
           ELTEQA
Sbjct: 150 ELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. Swiss-Prot
Match: sp|Q2L946|RR3_GOSHI (30S ribosomal protein S3, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps3 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.4e-27
Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 13  RKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAI 72
           RK+EELQ+NVQKE N  NRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAI
Sbjct: 90  RKLEELQMNVQKELNCMNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAI 149

Query: 73  ELTEQA 79
           ELTEQA
Sbjct: 150 ELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. Swiss-Prot
Match: sp|Q09WX9|RR3_MORIN (30S ribosomal protein S3, chloroplastic OS=Morus indica OX=248361 GN=rps3 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.4e-27
Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 0 

Query: 8   LFISSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKA 67
           L I  +KIEELQ+N+QKE NS NRKLN+AITRI NPYGHPNILAEFIAGQLKNRVSFRKA
Sbjct: 83  LLIEHQKIEELQMNIQKELNSVNRKLNMAITRIANPYGHPNILAEFIAGQLKNRVSFRKA 142

Query: 68  MKKAIELTEQA 79
           MKKAIELTEQA
Sbjct: 143 MKKAIELTEQA 153

[Close]
BLAST of CsGy3G019110 vs. Swiss-Prot
Match: sp|A4QL57|RR3_DRANE (30S ribosomal protein S3, chloroplastic OS=Draba nemorosa OX=171822 GN=rps3 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-26
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 13  RKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAI 72
           R+IEELQINVQKE N  NRKLNIAITRI NPYGHPNILAEFIAGQLKNRVSFRKAMKKAI
Sbjct: 90  RRIEELQINVQKELNCVNRKLNIAITRISNPYGHPNILAEFIAGQLKNRVSFRKAMKKAI 149

Query: 73  ELTEQA 79
           ELTEQA
Sbjct: 150 ELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. TrEMBL
Match: tr|A0A218KG80|A0A218KG80_CUCSA (30S ribosomal protein S3, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rps3 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.5e-28
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 12  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 71
           SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA
Sbjct: 89  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 148

Query: 72  IELTEQA 79
           IELTEQA
Sbjct: 149 IELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. TrEMBL
Match: tr|A0A1X9Q171|A0A1X9Q171_CUCSA (30S ribosomal protein S3, chloroplastic OS=Cucumis sativus OX=3659 GN=rps3 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.5e-28
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 12  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 71
           SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA
Sbjct: 89  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 148

Query: 72  IELTEQA 79
           IELTEQA
Sbjct: 149 IELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. TrEMBL
Match: tr|A0A1P8C7T5|A0A1P8C7T5_9ROSI (30S ribosomal protein S3, chloroplastic OS=Cucumis x hytivus OX=442738 GN=rps3 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.5e-28
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 12  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 71
           SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA
Sbjct: 89  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 148

Query: 72  IELTEQA 79
           IELTEQA
Sbjct: 149 IELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. TrEMBL
Match: tr|W8E3G6|W8E3G6_9ROSI (Ribosomal protein S3 OS=Cucumis hystrix OX=396994 GN=rps3 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.5e-28
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 12  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 71
           SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA
Sbjct: 89  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 148

Query: 72  IELTEQA 79
           IELTEQA
Sbjct: 149 IELTEQA 155

[Close]
BLAST of CsGy3G019110 vs. TrEMBL
Match: tr|X2EZ87|X2EZ87_LAGSI (30S ribosomal protein S3, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rps3 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.2e-27
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 12  SRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 71
           SRKIEELQ+NVQKE NSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA
Sbjct: 89  SRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKA 148

Query: 72  IELTEQA 79
           IELTEQA
Sbjct: 149 IELTEQA 155

The following BLAST results are available for this feature:
BLAST of CsGy3G019110 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009346519.19.8e-28100.00ribosomal protein S3 (chloroplast) [Cucumis x hytivus] >AOW71130.1 ribosomal pro... [more]
YP_247638.19.8e-28100.00ribosomal protein S3 [Cucumis sativus] >YP_009004081.1 ribosomal protein S3 [Cuc... [more]
YP_009456184.11.1e-2697.01ribosomal protein S3 (chloroplast) [Lagenaria siceraria] >AHM88705.1 ribosomal p... [more]
AHM88764.11.1e-2697.01ribosomal protein S3 (chloroplast) [Lagenaria siceraria][more]
AHM88937.11.1e-2697.01ribosomal protein S3 (chloroplast) [Lagenaria siceraria][more]
BLAST of CsGy3G019110 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00800.13.8e-2687.88structural constituent of ribosome[more]
BLAST of CsGy3G019110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q4VZN0|RR3_CUCSA3.2e-30100.0030S ribosomal protein S3, chloroplastic OS=Cucumis sativus OX=3659 GN=rps3 PE=3 ... [more]
sp|A0ZZ73|RR3_GOSBA7.4e-2792.4230S ribosomal protein S3, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps3 ... [more]
sp|Q2L946|RR3_GOSHI7.4e-2792.4230S ribosomal protein S3, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps3 PE... [more]
sp|Q09WX9|RR3_MORIN7.4e-2785.9230S ribosomal protein S3, chloroplastic OS=Morus indica OX=248361 GN=rps3 PE=3 S... [more]
sp|A4QL57|RR3_DRANE2.2e-2692.4230S ribosomal protein S3, chloroplastic OS=Draba nemorosa OX=171822 GN=rps3 PE=3... [more]
BLAST of CsGy3G019110 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A218KG80|A0A218KG80_CUCSA6.5e-28100.0030S ribosomal protein S3, chloroplastic OS=Cucumis sativus var. hardwickii OX=31... [more]
tr|A0A1X9Q171|A0A1X9Q171_CUCSA6.5e-28100.0030S ribosomal protein S3, chloroplastic OS=Cucumis sativus OX=3659 GN=rps3 PE=3 ... [more]
tr|A0A1P8C7T5|A0A1P8C7T5_9ROSI6.5e-28100.0030S ribosomal protein S3, chloroplastic OS=Cucumis x hytivus OX=442738 GN=rps3 P... [more]
tr|W8E3G6|W8E3G6_9ROSI6.5e-28100.00Ribosomal protein S3 OS=Cucumis hystrix OX=396994 GN=rps3 PE=3 SV=1[more]
tr|X2EZ87|X2EZ87_LAGSI7.2e-2797.0130S ribosomal protein S3, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rps3 P... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR036419Ribosomal_S3_C_sf
IPR005704Ribosomal_S3_bac
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G019110.1CsGy3G019110.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR1176030S/40S RIBOSOMAL PROTEIN S3coord: 10..79
IPR005704Ribosomal protein S3, bacterialPANTHERPTHR11760:SF1930S RIBOSOMAL PROTEIN S3, CHLOROPLASTICcoord: 10..79
IPR036419Ribosomal protein S3, C-terminal domain superfamilySUPERFAMILYSSF54821Ribosomal protein S3 C-terminal domaincoord: 42..77

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G019110Cucurbita pepo (Zucchini)cgybcpeB317
CsGy3G019110Cucurbita pepo (Zucchini)cgybcpeB362
CsGy3G019110Cucumber (Chinese Long) v2cgybcuB109
CsGy3G019110Bottle gourd (USVL1VR-Ls)cgyblsiB198
CsGy3G019110Melon (DHL92) v3.5.1cgybmeB210
CsGy3G019110Melon (DHL92) v3.6.1cgybmedB215
CsGy3G019110Watermelon (Charleston Gray)cgybwcgB214
CsGy3G019110Watermelon (97103) v1cgybwmB229
CsGy3G019110Wild cucumber (PI 183967)cgybcpiB110
CsGy3G019110Silver-seed gourdcarcgybB0043
CsGy3G019110Silver-seed gourdcarcgybB0650
CsGy3G019110Cucumber (Chinese Long) v3cgybcucB117
CsGy3G019110Watermelon (97103) v2cgybwmbB206
CsGy3G019110Wax gourdcgybwgoB271
CsGy3G019110Cucurbita maxima (Rimu)cgybcmaB332
CsGy3G019110Cucurbita maxima (Rimu)cgybcmaB410
CsGy3G019110Cucurbita moschata (Rifu)cgybcmoB301
CsGy3G019110Cucurbita moschata (Rifu)cgybcmoB386