CsGy3G018820 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G018820
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	neurochondrin isoform X4
Location	Chr3 : 14955817 .. 14961759 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAATTATGAAAGATATCAAGGTGGACATGAAAGAATATCAATTGGAAAGCTTATTCTTTCCCACACTTACATGTATGGTGGATGTAGGCACGACTCCTACAACTGCATTTGTGCCACTGGAGATAAGAGGTAAGTCCGCTAACAATAATCATCTACCTGTTTTTCCAAACTGCCCTATGGTCATTTAAGCTTTTAGTGCCTTTACTTGATCTTGGTTGCATGACTTTGTCATTGTTTCTTACTTCCCTCTAATTCTGTTTATATTTCTGTTTAATATGCTGATGTTGCAATTATGGAAAAAGAAATCATGGGGTGTTCTTATAATTTTGCTGGTGAAACTAGTAAGGGGCACTTTCCCTTCATCGTGCCCTTTAGATGTTGATTACTGTGATTTAATTTTCTATAGCCCATTGGAATGTTGTTTAAGCATTTCTGGAATGGATCTCAATCAATATTTTACTTTTCATATTGAACGACGTTATTAACATCTTGGATGTTAGTAAAAGCAGAGAGAAGTTATATGTGTTGTAGCATTAATATTGAATGTTGTATTATTCCTCAATATAGATCAACTCAATTGGTAAATTTGTAATATTTGCTGATCAAAATGTTTTTTCTTTTGGTCTCTTCACGTTGAATGATGTTAAAATACTAGTATCAATTAATAACTCAATCACTAGCATTTGTTGGAAGTGCAAGAATTGTGCAAAGGTTTGGTTAAGGGTATACAATATTTGCTCTTTACCTTAGAAAATTAAAGTCATTAGACAAACAAAAGAAAAAACTGTTTATAGGTATGAGCATTTTGGTAACATTCCTGATCAAGATTTTGTTCCCACTAGAAGGTAAAGAAATTATGGTCATAAACATGCTAATTATCTCATATTTTAATTGATGATGTGAGTTATTGAAATATGCACACATGTATTGATCAGGTTCCTGCGGCTTCTTGTTGATGTTTTGGCAATAGCTGCATCTTGTTTGGTAGATTGTGATCCATATGGTTTTTACATTTTGACGACATATCTTTTTGGTTCTATGGGTAGGCTCCTCACATTGAACAATTATCTACTCATTTTCCCTTCAATTTTTTCGACCCATTTTCTTTTCAAATGTTATTTTCATATAGGTTTAAATATTCATGAGACGAGATTTGTGTCCAATTAGAAATGTATTTAACTGTTTTCTTTTTCTATTTTCTGAATAGGTTTGTATCTTGTTTTGTATTCTTTGTAGGATGAACTCATTACTTGGTGTGACTAGGCTTCAAGGTAATATTGTTGAACAATGTTTAATGACATTAGCTATGAAGTATTTCTATAGTTGGGAAGTCTTAGTAACTGTCATGAGAACTTTTCATAGCTTGCTTCTAATACTTCTATCTTGAAATTAATCTTTCACATATTCTCATTTGTGAAATTTGATCTCTTGTTGCCTTGGTTTGATATCAAACTCATACAAACACTTTGAGCTAGGCTGAGAAGCAAAGAAACAAGGTTACTTTATGATGTGAATTACCTTTAACATCTTTTTTCTAGTGTATCATTATGATAAATCTATCAGTTTTTTTTCTTTTTTTTTTTGTGTGTAGAGATTTAGAATGATTTTGACCACATGGTTATATTGGTACAATATGTAGTTTATTGAAAATGGACTTGAAGGAGATGCTGATTCTGGCGATGAAGAAGATGAAATGGAGGACACTGATGGTGTGGAAGTGGAACATCTACACATTTCAGATTACCAAGGTTTTGCACTAATATATATCCGATTGATTTACTATAGTGATGAAACTACCAAGCAAGTGATTGATGTTTGATTCGTGACAAGATTTGTTGTAATTTAGTTATCAACGACAATACATTGTATTTAGTTTCTTTGTAAAAATATATTACCAAGGTTTAGTTTCTATTTTACTTGTATTTATTCCTTTGGGAAAATTCGATAGATTTCGTGTACTTAATTTCTTTGTAAAAATGTTATCTATGTTATTGTTATATATGAAAGTTCTTATTTTTATGTGTACTAGTTTTGTGATAAAATAAAATCATTGAATTAGAAGAACAAAAATATAAATGAATTTTAATTTTTTTTATAAAGAAATTCATAACATACTTGACGGTTTTAAAATGTCATAAACAAGTGCATTTTTTACGGTTTTTCAATGTTATAAACAATCAATTTCTTGACAGTTATTAAATGTCATGAACATTTATACTCTTGACGGTTTTAAGATGTCATAAACATTCTACTCTTGACGGTTTTTAACTGTCATGAACATTTGTATACTTGAGGTTTATAAAACGTCAACGTTCAATATTCTTGACGTTTTTATCAACCGTCAAGAACTTTGGCTTTTTTGACACTGACTTCAAGGACGATTTTAAAACCGTCAAGAATAGTGATTCTTGACAGTTTAAAACGTCAAGAGAGTCTGTTTTTGTAGTAGTGTAAATTTAAATTTTATAATTTAATTATGCGTTCATGGCACTTTTGCAATTATTTGAAACTTCATCTTTTAGGTTTTATTAGACAAAAGAAAAGAAGGAGATTGAGAGAGGGCGCAGCCGACTAGAGACAAATACAATGAGAGAGAGAGATTTATTCTTGCAAATAAGAGAGGAGAAGAGCTCAAATGTATCTTCAATGTAGGAAGGACGTGAAGAACTCACCGATTTGAGTGGACGAACTTACCGATGTATATCTTGCTAAGATGTATATAAAGTTTGAATTCTATGGTATAATTTCATGATTTTATCTTTATTATAATATCAATAATGCTCCCCTTTTGAATTTTTTTGATGAATTGATGGTTTCAAATGGTTTTCAAACTTTACTTAGGGTTTCAAATGATAGAAGGAAGTAAGTGGCCGAAATCCAAGGAAAAAATGATCACTTGCAGAGATGTTAAATTTTGAGCTTCCCATTAATGACAACTTTTCTAATCTTTATGTTTTTGGGGAGAAATTTTTATGTATCATATATGTTATTTCAATTACAATGTATTTGAGGTTCAGGTGAATAATTGTATTTTACATATTAGTTAGGGGCATTTGAGGGATTGTTTTATTTATTTATATTTCTAAATTTTATGTTTTGCTATTTTAACAATTTAAATTTATTTTTGCTATTTGCCCAAATAAAAGTCATAATTTGTTATTTGTCTTGACAATTTTTTTTTTTATAATGCCACATGTTTTCATCCTAACCGTTGGACCAATTTAATTATTTTTGGTTCAATTAAATATTATTTACTTGAGCTAAGTTCAATTGAGCCCAAAAATAAGCTTAATTGAGGCCGCAAAATTTGATCTAAATTCATGTGGTTGAGCCCATGGGTCTGATCCATGGACCGGATCGACTCAATCCCATAAAACCCATTAGAGAACTCTATAAATAGAGAAGTTCTTTTCATTTGTATGAGTTGAAAATTTCTAACTTCAGAAAGTTTGAAGAGAATTCTCCAAAGAGCTAGAAGATTTCCAACTCCCCAAAAGATACAAACTAACAAAAGATATAAACTTTCTTACTAAACTCTAAGTCTTTCTTCTAAAGAGTTTAGAAGCTTCTTCAACTTCCCTCGAAGATTGAAGCTTCTTTGAAAATACAAATATTCTTCCAAGACTCCAACTTCAAGAACATCACGTGCTCTAGTTCCTTCAAATCAAGTGATGTTCATCAAGTGATGTTCTCCACTTCCTTCAAATCAAGCATAGACGTTCAATCGAGAGAGAACCAAATGATCAAATTCTAGGAATCTAACCACATCACATCAAATCAACAAAAATACAATATCAACTAATTCAACTGCATGAACCAAATTTCTCCGGAAATCTCGTGCGAACACTCATGCAAACCCTTTCTCAACCTCTCCAAACACCATCGACCCTCGCAATTCTAACATCCAATAGTTGACCATTTCTCAGGTATCTATCATCGACATTCCTCGCCCGTCATCCATCATCGGCGTTCCTCGTCAGTCGTCGGCCATTCCTCAGGTTAGTCTTTTTTTTTTCGTCACTTGGAAACTTTTGTAGAATAAATCCCCAATATTTTTATTTTATGAGGTTGGATTTTGAGTTCTTTTATAGCTAAAATGAGATTAAGAGGTGACATTGCCTGGTTTCTTATATGTTAATCAAATTTGCTTGTTAACTTTTTTTTTGTAATTCGTATGCTCTTTTTTTCTTCATGAGGGAGCGCCTTAACTAAGATTTTATCTATGGAAGATTCTCTCTATAAACATATTTGTAGTTTTTAATCTGTAGTAGGTTATTTCCTCATTGTTGGCACCATTAATCACATTTATATTGCATTAGAAATTTTATTGTTTATGATATGGAAACTAAAGGTCTATGTTTCCTTATTATTTATTTATTCATTCATTTTGTGTTGACTTGCTCTTGAAAAACAAAGAAACTACTTAATTATATTTGATTCCGGCTTTTTTCTCTTTTCAAAATTGTACTATAGGGTATGTCTCATAGTCTGTTCCACAATCTACATTTGTTGTTATGAGTATTCATGTTTCCTATCTACATTTGTCGTTATGACTTAAATGTTGGGAATGTTGAGCCTTCAGAGACTTAATTAACATGAATGAAATTTTAGTTAAGGTTAGCTAGTGAAGATATAACTTGAGTACCTAAGATTAACGCCTTCTTTCAACATTGTCTTCTTGTTCAATTTTAGATAGGCTTTTCAATCTGAATTCATTGGCTTGCAACTCTGCTCAGTAAATAATAATACTATGTAAGAATAAAACTGATTAGATTTTTTAGGATCCTTATAGTAGACTACGGTTCGTTATTGGTTTGATGAATGTTTGAACTTGGTTTCATATAGGTTTAAATATTCATGTATGAGATAAGATTTGTGAATGTTGAAAGGATGTTGAAGGATATTGAAACTTCAACAACTTTATGGGAATTTGACTGGAGAATTTCTAGCATGATGAAGCCTCATTGTTTGCGTTCTCTCTTAATTGCTCAGGTTTTTCGAGATAGTTGATTTAGGCCTATGTCTTAGCTCTTGTGAATCTAATTCACAAACCACAATGATACTTATTCTATTTTTCTACGAACCATAATGTTAGTTTTTCTGCGTTGACAAAGACCAAAATTTTTGTTTCCTATCTCTCTCTTTTAATCCTTCAGAATTTATGGGTTTCTTTGTAATCATTTGTTTTGTGCCTACCATCGGAACTCTTCGTCAGTTTTGTATGTCCGTAGTCTTCTATACACTCTCTCTCAAAGAAAAATAAATTGTGGTTTAAAATATATTTTGTATTATTTTAGTCTTGTTCAAAGTGTTTTCTATGCTTTGAAAATAAATGGTGTTATAAAGGTACATATTACAACTTGTTGGAGGAATATCCTTTGCAGTGTAATTGCTTGTCTTAACATTGCTTGATAATTAAGGAGTACTGCCTTGGTGCAAACTTTATAACAAGGAACAATATTCATTTTCAATGGTACCAACTACCCAAAGACTCCCGAAGTAATATGAAATGTGAATTTTCTTCATTTAGTTAGTATAACATGTGGGTATTCTAATTTTTTGGTTCAGTAGCATTTATGATTTGGTTTCTTCAAACTAGATTAGGGTTTTATTTGTACATGGATTGCCTCTGGTTAACATTATTTTCTCTTTTATTCCAGTTTTCTTGCATAAACCCCCTGATGCATGGACAAAAAAAGTTAAGGAACTCCTGGTCTATATGCTCTCTATCGTTGAAGGTGAAGATGAACAGAGGTTTGTCAGCATCTAGTTATGAACGACAATTTGGTATTTATTGTACGAATCTAAAATACCTGAATTCCATTTCTATATTTACAAATGACAGCCCCTTCAACTCTTTGTGCTTCTTGCTTCCCATGCTATGGCAAATTACGATGAATGTTGAAGGATGTAAGAATTTAATTTCTTTTGGAGGTCTAGCA

mRNA sequence

GTAATTATGAAAGATATCAAGGTGGACATGAAAGAATATCAATTGGAAAGCTTATTCTTTCCCACACTTACATGTATGGTGGATGTAGGCACGACTCCTACAACTGCATTTGTGCCACTGGAGATAAGAGGATGAACTCATTACTTGGTGTGACTAGGCTTCAAGGTATCTATCATCGACATTCCTCGCCCGTCATCCATCATCGGCGTTCCTCGTCAGTCGTCGGCCATTCCTCAGTTTTCTTGCATAAACCCCCTGATGCATGGACAAAAAAAGTTAAGGAACTCCTGGTCTATATGCTCTCTATCGTTGAAGGTGAAGATGAACAGAGCCCCTTCAACTCTTTGTGCTTCTTGCTTCCCATGCTATGGCAAATTACGATGAATGTTGAAGGATGTAAGAATTTAATTTCTTTTGGAGGTCTAGCA

Coding sequence (CDS)

ATGTATGGTGGATGTAGGCACGACTCCTACAACTGCATTTGTGCCACTGGAGATAAGAGGATGAACTCATTACTTGGTGTGACTAGGCTTCAAGGTATCTATCATCGACATTCCTCGCCCGTCATCCATCATCGGCGTTCCTCGTCAGTCGTCGGCCATTCCTCAGTTTTCTTGCATAAACCCCCTGATGCATGGACAAAAAAAGTTAAGGAACTCCTGGTCTATATGCTCTCTATCGTTGAAGGTGAAGATGAACAGAGCCCCTTCAACTCTTTGTGCTTCTTGCTTCCCATGCTATGGCAAATTACGATGAATGTTGAAGGATGTAAGAATTTAATTTCTTTTGGAGGTCTAGCA

Protein sequence

MYGGCRHDSYNCICATGDKRMNSLLGVTRLQGIYHRHSSPVIHHRRSSSVVGHSSVFLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNLISFGGLA

Homology

[Close]

BLAST of CsGy3G018820 vs. NCBI nr
Match: XP_008452892.1 (PREDICTED: neurochondrin isoform X1 [Cucumis melo] >XP_008452893.1 PREDICTED: neurochondrin isoform X1 [Cucumis melo] >XP_016901342.1 PREDICTED: neurochondrin isoform X2 [Cucumis melo])

HSP 1 Score: 106.3 bits (264), Expect = 7.3e-20
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 57  FLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNLISFG 116
           FL + PDAWT+KVKELL YMLS VEGEDEQSPFNS+CFLLPML QITMNVEGCK L+S G
Sbjct: 419 FLAQTPDAWTEKVKELLDYMLS-VEGEDEQSPFNSVCFLLPMLCQITMNVEGCKTLVSSG 478

Query: 117 GLA 120
           GLA
Sbjct: 479 GLA 480

[Close]

BLAST of CsGy3G018820 vs. NCBI nr
Match: XP_008452894.1 (PREDICTED: neurochondrin isoform X3 [Cucumis melo])

HSP 1 Score: 106.3 bits (264), Expect = 7.3e-20
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 57  FLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNLISFG 116
           FL + PDAWT+KVKELL YMLS VEGEDEQSPFNS+CFLLPML QITMNVEGCK L+S G
Sbjct: 419 FLAQTPDAWTEKVKELLDYMLS-VEGEDEQSPFNSVCFLLPMLCQITMNVEGCKTLVSSG 478

Query: 117 GLA 120
           GLA
Sbjct: 479 GLA 480

[Close]

BLAST of CsGy3G018820 vs. NCBI nr
Match: XP_008452895.1 (PREDICTED: neurochondrin isoform X4 [Cucumis melo])

HSP 1 Score: 106.3 bits (264), Expect = 7.3e-20
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 57  FLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNLISFG 116
           FL + PDAWT+KVKELL YMLS VEGEDEQSPFNS+CFLLPML QITMNVEGCK L+S G
Sbjct: 419 FLAQTPDAWTEKVKELLDYMLS-VEGEDEQSPFNSVCFLLPMLCQITMNVEGCKTLVSSG 478

Query: 117 GLA 120
           GLA
Sbjct: 479 GLA 480

[Close]

BLAST of CsGy3G018820 vs. NCBI nr
Match: XP_022935920.1 (uncharacterized protein LOC111442684 isoform X1 [Cucurbita moschata])

HSP 1 Score: 106.3 bits (264), Expect = 7.3e-20
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 57  FLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNLISFG 116
           FL + PDAWT+KVKELL YMLS VEGEDEQSPFNS+CFLLPML QITMNVEGCK L+S G
Sbjct: 419 FLAQTPDAWTEKVKELLDYMLS-VEGEDEQSPFNSVCFLLPMLCQITMNVEGCKTLVSSG 478

Query: 117 GLA 120
           GLA
Sbjct: 479 GLA 480

[Close]

BLAST of CsGy3G018820 vs. NCBI nr
Match: XP_022935921.1 (uncharacterized protein LOC111442684 isoform X2 [Cucurbita moschata])

HSP 1 Score: 106.3 bits (264), Expect = 7.3e-20
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 57  FLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNLISFG 116
           FL + PDAWT+KVKELL YMLS VEGEDEQSPFNS+CFLLPML QITMNVEGCK L+S G
Sbjct: 419 FLAQTPDAWTEKVKELLDYMLS-VEGEDEQSPFNSVCFLLPMLCQITMNVEGCKTLVSSG 478

Query: 117 GLA 120
           GLA
Sbjct: 479 GLA 480

[Close]

BLAST of CsGy3G018820 vs. TAIR10
Match: AT4G32050.1 (neurochondrin family protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-12
Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 57  FLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNL 113
           +L + P A  ++V++LL YMLS V+GEDE SPF S CFLLPML QITMN EGCK L
Sbjct: 414 YLAETPVACKEQVQDLLDYMLS-VKGEDESSPFLSTCFLLPMLCQITMNAEGCKLL 468

[Close]

BLAST of CsGy3G018820 vs. TAIR10
Match: AT4G29490.1 (Metallopeptidase M24 family protein)

HSP 1 Score: 42.4 bits (98), Expect = 2.3e-04
Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = 0


Query: 1   MYGGCRHDSYNCICATGD 19
           MYGGCRH SY CICATGD
Sbjct: 230 MYGGCRHCSYTCICATGD 247

[Close]

BLAST of CsGy3G018820 vs. TrEMBL
Match: tr|A0A1S3BW48|A0A1S3BW48_CUCME (neurochondrin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493779 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.8e-20
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 57  FLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNLISFG 116
           FL + PDAWT+KVKELL YMLS VEGEDEQSPFNS+CFLLPML QITMNVEGCK L+S G
Sbjct: 419 FLAQTPDAWTEKVKELLDYMLS-VEGEDEQSPFNSVCFLLPMLCQITMNVEGCKTLVSSG 478

Query: 117 GLA 120
           GLA
Sbjct: 479 GLA 480

[Close]

BLAST of CsGy3G018820 vs. TrEMBL
Match: tr|A0A1S3BUW9|A0A1S3BUW9_CUCME (neurochondrin isoform X4 OS=Cucumis melo OX=3656 GN=LOC103493779 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.8e-20
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 57  FLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNLISFG 116
           FL + PDAWT+KVKELL YMLS VEGEDEQSPFNS+CFLLPML QITMNVEGCK L+S G
Sbjct: 419 FLAQTPDAWTEKVKELLDYMLS-VEGEDEQSPFNSVCFLLPMLCQITMNVEGCKTLVSSG 478

Query: 117 GLA 120
           GLA
Sbjct: 479 GLA 480

[Close]

BLAST of CsGy3G018820 vs. TrEMBL
Match: tr|A0A1S3BUZ3|A0A1S3BUZ3_CUCME (neurochondrin isoform X3 OS=Cucumis melo OX=3656 GN=LOC103493779 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.8e-20
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 57  FLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNLISFG 116
           FL + PDAWT+KVKELL YMLS VEGEDEQSPFNS+CFLLPML QITMNVEGCK L+S G
Sbjct: 419 FLAQTPDAWTEKVKELLDYMLS-VEGEDEQSPFNSVCFLLPMLCQITMNVEGCKTLVSSG 478

Query: 117 GLA 120
           GLA
Sbjct: 479 GLA 480

[Close]

BLAST of CsGy3G018820 vs. TrEMBL
Match: tr|A0A0A0L170|A0A0A0L170_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652750 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.7e-17
Identity = 48/63 (76.19%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 57  FLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNLISFG 116
           FL + PDAW ++V ELL YMLS VEGEDEQSPFNS+CFLLPML QITMNVEGCK L+S  
Sbjct: 459 FLAQTPDAWAERVTELLDYMLS-VEGEDEQSPFNSVCFLLPMLCQITMNVEGCKTLVSSR 518

Query: 117 GLA 120
           GLA
Sbjct: 519 GLA 520

[Close]

BLAST of CsGy3G018820 vs. TrEMBL
Match: tr|A0A2N9J8E6|A0A2N9J8E6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61020 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-14
Identity = 43/61 (70.49%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 57   FLHKPPDAWTKKVKELLVYMLSIVEGEDEQSPFNSLCFLLPMLWQITMNVEGCKNLISFG 116
            +L + P A  +KV+ELL YMLSI EGEDEQSPF+S+CFLLPML QITM++EGCK L SFG
Sbjct: 1823 YLAETPIACQEKVRELLEYMLSI-EGEDEQSPFHSICFLLPMLCQITMDIEGCKALASFG 1882

Query: 117  G 118
            G
Sbjct: 1883 G 1882

The following BLAST results are available for this feature:

BLAST of CsGy3G018820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452892.1	7.3e-20	82.54	PREDICTED: neurochondrin isoform X1 [Cucumis melo] >XP_008452893.1 PREDICTED: ne...	[more]
XP_008452894.1	7.3e-20	82.54	PREDICTED: neurochondrin isoform X3 [Cucumis melo]	[more]
XP_008452895.1	7.3e-20	82.54	PREDICTED: neurochondrin isoform X4 [Cucumis melo]	[more]
XP_022935920.1	7.3e-20	82.54	uncharacterized protein LOC111442684 isoform X1 [Cucurbita moschata]	[more]
XP_022935921.1	7.3e-20	82.54	uncharacterized protein LOC111442684 isoform X2 [Cucurbita moschata]	[more]

BLAST of CsGy3G018820 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32050.1	1.4e-12	64.29	neurochondrin family protein	[more]
AT4G29490.1	2.3e-04	88.89	Metallopeptidase M24 family protein	[more]

BLAST of CsGy3G018820 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G018820 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BW48\|A0A1S3BW48_CUCME	4.8e-20	82.54	neurochondrin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493779 PE=4 SV=1	[more]
tr\|A0A1S3BUW9\|A0A1S3BUW9_CUCME	4.8e-20	82.54	neurochondrin isoform X4 OS=Cucumis melo OX=3656 GN=LOC103493779 PE=4 SV=1	[more]
tr\|A0A1S3BUZ3\|A0A1S3BUZ3_CUCME	4.8e-20	82.54	neurochondrin isoform X3 OS=Cucumis melo OX=3656 GN=LOC103493779 PE=4 SV=1	[more]
tr\|A0A0A0L170\|A0A0A0L170_CUCSA	1.7e-17	76.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652750 PE=4 SV=1	[more]
tr\|A0A2N9J8E6\|A0A2N9J8E6_FAGSY	2.3e-14	70.49	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61020 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008709	Neurochondrin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G018820.1	CsGy3G018820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008709	Neurochondrin	PFAM	PF05536	Neurochondrin	coord: 56..117 e-value: 2.9E-5 score: 22.6

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G018820	Wax gourd	cgybwgoB271
CsGy3G018820	Cucurbita maxima (Rimu)	cgybcmaB332
CsGy3G018820	Cucurbita maxima (Rimu)	cgybcmaB410
CsGy3G018820	Cucurbita moschata (Rifu)	cgybcmoB301
CsGy3G018820	Cucurbita moschata (Rifu)	cgybcmoB386
CsGy3G018820	Cucurbita pepo (Zucchini)	cgybcpeB317
CsGy3G018820	Cucurbita pepo (Zucchini)	cgybcpeB362
CsGy3G018820	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G018820	Bottle gourd (USVL1VR-Ls)	cgyblsiB198
CsGy3G018820	Melon (DHL92) v3.5.1	cgybmeB210
CsGy3G018820	Melon (DHL92) v3.6.1	cgybmedB215
CsGy3G018820	Watermelon (Charleston Gray)	cgybwcgB214
CsGy3G018820	Watermelon (97103) v1	cgybwmB229
CsGy3G018820	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G018820	Silver-seed gourd	carcgybB0064
CsGy3G018820	Silver-seed gourd	carcgybB0065
CsGy3G018820	Silver-seed gourd	carcgybB0650
CsGy3G018820	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G018820	Watermelon (97103) v2	cgybwmbB206