CsGy3G018810 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G018810
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionnigrin b-like
LocationChr3 : 14930045 .. 14930926 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGCCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGTGATGGATTGTGTTTAGAGATGTCTCCATGGTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATCACCATGTGACGAGAAGAAACAAACTCAATTATGGACGATTGTCGGAGATGGCACAATTCGACCCATGAATGATAAATTTTGCTTGGCTGCTGAAGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTATCAGATCCTAACAAGAAATGGACCCAGAAGAATGACGGAACCATAGCCCTCGCCGATTCAAGAATGGTTCTAACAGGAGATTTAGACTATGTGACATTGCAAAGTAACAAATATACACCATCACAAAGTTGGGAAGTCACGGAAAGTTTAAACTCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCCACAGACGATTCAAGTCATGTGGGATTAAATGGATGTAATACACACAATAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAACACAAACTATTGCTTGACTTCTGACCAAGATTTCGGTCGCTTTGTAGTTGTGTCTAAATGTGAAGACAAACCGCAACAACGTTGGAGTCTTGATGCTAAAGACTATACTATTGACCATCCCAGCACTGACATGGTCCTAGATGTGTTTAGTGTGCCTGATTCTACTTTTCCATCAGTACTCGTTACGAACCGTCGTGATGGAAGTGCTAGCCAACGATGGACTATTATTAACTAA

mRNA sequence

ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGCCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGTGATGGATTGTGTTTAGAGATGTCTCCATGGTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATCACCATGTGACGAGAAGAAACAAACTCAATTATGGACGATTGTCGGAGATGGCACAATTCGACCCATGAATGATAAATTTTGCTTGGCTGCTGAAGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTATCAGATCCTAACAAGAAATGGACCCAGAAGAATGACGGAACCATAGCCCTCGCCGATTCAAGAATGGTTCTAACAGGAGATTTAGACTATGTGACATTGCAAAGTAACAAATATACACCATCACAAAGTTGGGAAGTCACGGAAAGTTTAAACTCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCCACAGACGATTCAAGTCATGTGGGATTAAATGGATGTAATACACACAATAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAACACAAACTATTGCTTGACTTCTGACCAAGATTTCGGTCGCTTTGTAGTTGTGTCTAAATGTGAAGACAAACCGCAACAACGTTGGAGTCTTGATGCTAAAGACTATACTATTGACCATCCCAGCACTGACATGGTCCTAGATGTGTTTAGTGTGCCTGATTCTACTTTTCCATCAGTACTCGTTACGAACCGTCGTGATGGAAGTGCTAGCCAACGATGGACTATTATTAACTAA

Coding sequence (CDS)

ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGCCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGTGATGGATTGTGTTTAGAGATGTCTCCATGGTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATCACCATGTGACGAGAAGAAACAAACTCAATTATGGACGATTGTCGGAGATGGCACAATTCGACCCATGAATGATAAATTTTGCTTGGCTGCTGAAGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTATCAGATCCTAACAAGAAATGGACCCAGAAGAATGACGGAACCATAGCCCTCGCCGATTCAAGAATGGTTCTAACAGGAGATTTAGACTATGTGACATTGCAAAGTAACAAATATACACCATCACAAAGTTGGGAAGTCACGGAAAGTTTAAACTCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCCACAGACGATTCAAGTCATGTGGGATTAAATGGATGTAATACACACAATAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAACACAAACTATTGCTTGACTTCTGACCAAGATTTCGGTCGCTTTGTAGTTGTGTCTAAATGTGAAGACAAACCGCAACAACGTTGGAGTCTTGATGCTAAAGACTATACTATTGACCATCCCAGCACTGACATGGTCCTAGATGTGTTTAGTGTGCCTGATTCTACTTTTCCATCAGTACTCGTTACGAACCGTCGTGATGGAAGTGCTAGCCAACGATGGACTATTATTAACTAA

Protein sequence

MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNKKWTQKNDGTIALADSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVVVSKCEDKPQQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN
Homology
[Close]
BLAST of CsGy3G018810 vs. NCBI nr
Match: NP_001274403.1 (uncharacterized protein LOC101221335 precursor [Cucumis sativus] >BAA88294.1 XSP30 [Cucumis sativus])

HSP 1 Score: 606.3 bits (1562), Expect = 5.5e-170
Identity = 289/293 (98.63%), Postives = 290/293 (98.98%), Query Frame = 0 

Query: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120
           NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK
Sbjct: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120

Query: 121 KWTQKNDGTIALADSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180
           KWTQKNDGTIAL DSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL
Sbjct: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180

Query: 181 QSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVVVSKCEDKP 240
           QSTDDSSHVGLNGCNT NKYQRWALYADGTIRQHVN NYCLTSDQDFGRFVVVSKCEDKP
Sbjct: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240

Query: 241 QQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 294
           QQRWSLDAKDYTIDHP+TDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN
Sbjct: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 293

[Close]
BLAST of CsGy3G018810 vs. NCBI nr
Match: KGN57579.1 (hypothetical protein Csa_3G217160 [Cucumis sativus])

HSP 1 Score: 604.7 bits (1558), Expect = 1.6e-169
Identity = 288/293 (98.29%), Postives = 289/293 (98.63%), Query Frame = 0 

Query: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120
           NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK
Sbjct: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120

Query: 121 KWTQKNDGTIALADSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180
           KWTQKNDGTIAL DSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL
Sbjct: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180

Query: 181 QSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVVVSKCEDKP 240
           QSTDDSSHVGLNGCNT NKYQRWALYADGTIRQHVN NYCLTSDQDFGRFVVVSKCEDKP
Sbjct: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240

Query: 241 QQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 294
           QQRWSLDAKDYTIDHP+TDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN
Sbjct: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 293

[Close]
BLAST of CsGy3G018810 vs. NCBI nr
Match: XP_004151509.2 (PREDICTED: nigrin b-like [Cucumis sativus] >KGN57577.1 hypothetical protein Csa_3G217140 [Cucumis sativus])

HSP 1 Score: 520.4 bits (1339), Expect = 4.0e-144
Identity = 252/293 (86.01%), Postives = 268/293 (91.47%), Query Frame = 0 

Query: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM--SPWYKPA 60
           MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120

Query: 121 NKKWTQKNDGTIALADSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180
           NK+W  KNDGTIALA+SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180

Query: 181 CLQSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVVVSKCED 240
           CLQSTDDSS+VGLNGCNT+ KYQRWALYADGTIRQHVN NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240

Query: 241 KPQQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 292
           KPQQRWSL+AKD TIDHP+T+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 293

[Close]
BLAST of CsGy3G018810 vs. NCBI nr
Match: XP_016901886.1 (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 467.6 bits (1202), Expect = 3.1e-128
Identity = 227/292 (77.74%), Postives = 246/292 (84.25%), Query Frame = 0 

Query: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSIIVAFSLTT LA+AVP NYGYG  YGGVP ATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPRATHLVGRDGLCLEMSPWFY-RGN 60

Query: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPN 120
           NFPTRLSPCDE KKQTQLWT+VGDGTIRPMNDKFCL A+V  G+INKAVV EC K  + N
Sbjct: 61  NFPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGLINKAVVRECAKEPNSN 120

Query: 121 KKWTQKNDGTIALADSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLC 180
           K+WT K DGTI   +S MVLTGD DYVTLQSNK TPSQSWE TES   M+ANIEWLNNLC
Sbjct: 121 KRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNNLC 180

Query: 181 LQSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVVVSKCEDK 240
           LQSTDDS+HVGLNGCN  NK QRWALY DGTIRQ+VN NYCLTSD+  GRF+V+SKCEDK
Sbjct: 181 LQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCEDK 240

Query: 241 PQQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 292
           PQQRW+L AKD TIDHP++DMV+DV  VP   F S +VTNRRDGSASQRWTI
Sbjct: 241 PQQRWNLGAKDSTIDHPNSDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

[Close]
BLAST of CsGy3G018810 vs. NCBI nr
Match: XP_004146289.1 (PREDICTED: nigrin b-like [Cucumis sativus] >KGN57583.1 hypothetical protein Csa_3G219180 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 3.2e-109
Identity = 198/292 (67.81%), Postives = 227/292 (77.74%), Query Frame = 0 

Query: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSI+VAFSLTT LA+AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFY-KGS 60

Query: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPN 120
           NFPTRLSPC+E KKQTQLWT++ D TIRPMND++CL + V    I   VVSEC K    N
Sbjct: 61  NFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSN 120

Query: 121 KKWTQKNDGTIALADSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLC 180
           KKW  K D TI    S MVLTG+ +YVT+Q NK  PSQSWE T+SL  MVANI+WL NLC
Sbjct: 121 KKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLC 180

Query: 181 LQSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVVVSKCEDK 240
           LQST DS++V L+GCN+ NK Q W+LY DGTIR+HVN NYCLTS+QDFGRFV VSKCEDK
Sbjct: 181 LQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDK 240

Query: 241 PQQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 292
           PQQRW L A+D TI+HP+TDMV+DV SVP    P  +VTN RDG+A+QRW I
Sbjct: 241 PQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWII 287

[Close]
BLAST of CsGy3G018810 vs. Swiss-Prot
Match: sp|P33183|NIGB_SAMNI (Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-26
Identity = 74/230 (32.17%), Postives = 116/230 (50.43%), Query Frame = 0 

Query: 40  HLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEV 99
           ++VGRDGLC+++   Y   G   P +L PC  ++  Q WT   D TIR M    C+ A  
Sbjct: 311 NIVGRDGLCVDVRNGYDTDGT--PLQLWPCGTQR-NQRWTFDSDDTIRSMGK--CMTANG 370

Query: 100 FYGVINKAVVSECGKVSDPNKKWTQKNDGTIALADSRMVLT----GDLDYVTLQSNKYTP 159
                N  V+  C   ++   KW    DG+I    S +V+T         + L+ N Y  
Sbjct: 371 LNNGSN-IVIFNCSTAAENAIKWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIYAA 430

Query: 160 SQSWEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHV 219
           SQ W VT ++  +VA+I     +CLQS  +++ V +  C   +  Q+WALY D TIR + 
Sbjct: 431 SQGWTVTNNVKPIVASIVGYKEMCLQSNGENNGVWMEDCEATSLQQQWALYGDRTIRVNS 490

Query: 220 NTNYCLTSD-QDFGRFVVVSKCEDKPQQRWSLDAKDYTIDHPSTDMVLDV 265
               C+T++  +    +++ KC+  P QRW  ++ D  I +P +  V+DV
Sbjct: 491 TRGLCVTTNGYNSKDLIIILKCQGLPSQRWFFNS-DGAIVNPKSRHVMDV 533

[Close]
BLAST of CsGy3G018810 vs. Swiss-Prot
Match: sp|Q41358|SNAIB_SAMNI (Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-24
Identity = 79/252 (31.35%), Postives = 122/252 (48.41%), Query Frame = 0 

Query: 43  GRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYG 102
           G DGLC+++   +   G   P +L PC   +  QLWT   DGTIR +    CL A     
Sbjct: 327 GWDGLCVDVRYGHYIDG--NPVQLRPCG-NECNQLWTFRTDGTIRWLGK--CLTAS---- 386

Query: 103 VINKAVVSECGKVSDPNKKWTQKNDGTIALADSRMVLT----GDLDYVTLQSNKYTPSQS 162
             +  ++ +C  V     KW    DGTI    S +VLT     +   ++L++N +   Q 
Sbjct: 387 --SSVMIYDCNTVPPEATKWVVSIDGTITNPHSGLVLTAPQAAEGTALSLENNIHAARQG 446

Query: 163 WEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTN 222
           W V + +  +V  I     +CL+   +++ V L  C  +   Q WALY DGTIR + N +
Sbjct: 447 WTVGD-VEPLVTFIVGYKQMCLRENGENNFVWLEDCVLNRVQQEWALYGDGTIRVNSNRS 506

Query: 223 YCLTS-DQDFGRFVVVSKCEDKPQQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLV 282
            C+TS D +    +V+ KCE    QRW  +    TI +P+  +++DV     S    +L 
Sbjct: 507 LCVTSEDHEPSDLIVILKCEGSGNQRWVFNTNG-TISNPNAKLLMDVAQRDVSLRKIILY 563

Query: 283 TNRRDGSASQRW 290
             R  G+ +Q+W
Sbjct: 567 --RPTGNPNQQW 563

[Close]
BLAST of CsGy3G018810 vs. Swiss-Prot
Match: sp|O22415|SNAIF_SAMNI (Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.1e-23
Identity = 77/252 (30.56%), Postives = 118/252 (46.83%), Query Frame = 0 

Query: 43  GRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYG 102
           G DGLC+++   +   G     +L PC   +  QLWT   DGTIR +    CL       
Sbjct: 327 GWDGLCVDVRDGHYIDGNT--VQLGPCG-NECNQLWTFRTDGTIRWLGK--CLTTS---- 386

Query: 103 VINKAVVSECGKVSDPNKKWTQKNDGTIALADSRMVLT----GDLDYVTLQSNKYTPSQS 162
             +  ++ +C  V     KW    DGTI    S +VLT     +   ++L++N +   Q 
Sbjct: 387 --SSVMIYDCNTVPPEATKWVVSTDGTITNPRSGLVLTAPQAAEGTALSLENNIHAARQG 446

Query: 163 WEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTN 222
           W V + +  +V  I     +CL    +++ V L  C  +   Q WALY DGTIR + N +
Sbjct: 447 WTVGD-VEPLVTFIVGYKQMCLTENGENNFVWLEDCVLNRVEQEWALYGDGTIRVNSNRS 506

Query: 223 YCLTS-DQDFGRFVVVSKCEDKPQQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLV 282
            C+TS D +    +V+ KCE    QRW  +    TI +P+  +V+DV     S    +L 
Sbjct: 507 LCVTSEDHEPSDLIVILKCEGSGNQRWVFNTNG-TISNPNAKLVMDVAQSNVSLRKIILY 563

Query: 283 TNRRDGSASQRW 290
                G+ +Q+W
Sbjct: 567 P--PTGNPNQQW 563

[Close]
BLAST of CsGy3G018810 vs. Swiss-Prot
Match: sp|P02879|RICI_RICCO (Ricin OS=Ricinus communis OX=3988 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.5e-20
Identity = 82/250 (32.80%), Postives = 116/250 (46.40%), Query Frame = 0 

Query: 22  VPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQ-TQLWTI 81
           V PN+   V     P    +VGR+GLC+++       G     +L PC       QLWT+
Sbjct: 309 VVPNFNADVCMDPEP-IVRIVGRNGLCVDVRDGRFHNG--NAIQLWPCKSNTDANQLWTL 368

Query: 82  VGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNKKWTQKNDGTIALADSRMVLT 141
             D TIR  N K         GV    ++ +C   +    +W   ++GTI    S +VL 
Sbjct: 369 KRDNTIR-SNGKCLTTYGYSPGVY--VMIYDCNTAATDATRWQIWDNGTIINPRSSLVLA 428

Query: 142 GDL----DYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNT 201
                    +T+Q+N Y  SQ W  T +    V  I  L  LCLQ+  +S  V +  C++
Sbjct: 429 ATSGNSGTTLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGLCLQA--NSGQVWIEDCSS 488

Query: 202 HNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVV-VSKCEDKPQ-QRWSLDAKDYTID 261
               Q+WALYADG+IR   N + CLTSD +    VV +  C      QRW +   D TI 
Sbjct: 489 EKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRW-MFKNDGTIL 548

Query: 262 HPSTDMVLDV 265
           +  + +VLDV
Sbjct: 549 NLYSGLVLDV 549

[Close]
BLAST of CsGy3G018810 vs. Swiss-Prot
Match: sp|Q9M6E9|AGGL_ABRPR (Agglutinin-1 OS=Abrus precatorius OX=3816 GN=AAG PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.5e-20
Identity = 79/257 (30.74%), Postives = 120/257 (46.69%), Query Frame = 0 

Query: 43  GRDGLCLEMSPWYKPAGINFPTRLSPC-DEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFY 102
           GRDGLC+++S          P  L  C D+ +  QLWT+  D TIR      CL     Y
Sbjct: 300 GRDGLCVDVSD--NAYNNGNPIILWKCKDQLEVNQLWTLKSDKTIRSKGK--CLTT-YGY 359

Query: 103 GVINKAVVSECGKVSDPNKKWTQKNDGTIALADSRMVLTGDLD----YVTLQSNKYTPSQ 162
              N  ++ +C         W   ++GTI    S +VL+ +       +T+Q N Y   Q
Sbjct: 360 APGNYVMIYDCSSAVAEATYWDIWDNGTIINPKSGLVLSAESSSMGGTLTVQKNDYRMRQ 419

Query: 163 SWEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNT 222
            W      +  V +I     LC+++  +S  + L+ C+   + Q+WA+Y DG+IR   NT
Sbjct: 420 GWRTGNDTSPFVTSIAGFFKLCMEAHGNS--MWLDVCDITKEEQQWAVYPDGSIRPVQNT 479

Query: 223 NYCLTSDQ-DFGRFVVVSKCEDK-PQQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSV 282
           N CLT ++   G  +V+  C +    QRW   + D TI +   DMV+DV S   S    +
Sbjct: 480 NNCLTCEEHKQGATIVMMGCSNAWASQRWVFKS-DGTIYNLYDDMVMDVKSSDPSLKQII 539

Query: 283 LVTNRRDGSASQRWTII 293
           L      G+A+Q W  +
Sbjct: 540 LWP--YTGNANQMWATL 546

[Close]
BLAST of CsGy3G018810 vs. TrEMBL
Match: tr|Q9SLV9|Q9SLV9_CUCSA (XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 3.7e-170
Identity = 289/293 (98.63%), Postives = 290/293 (98.98%), Query Frame = 0 

Query: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120
           NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK
Sbjct: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120

Query: 121 KWTQKNDGTIALADSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180
           KWTQKNDGTIAL DSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL
Sbjct: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180

Query: 181 QSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVVVSKCEDKP 240
           QSTDDSSHVGLNGCNT NKYQRWALYADGTIRQHVN NYCLTSDQDFGRFVVVSKCEDKP
Sbjct: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240

Query: 241 QQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 294
           QQRWSLDAKDYTIDHP+TDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN
Sbjct: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 293

[Close]
BLAST of CsGy3G018810 vs. TrEMBL
Match: tr|A0A0A0L9D1|A0A0A0L9D1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 1.1e-169
Identity = 288/293 (98.29%), Postives = 289/293 (98.63%), Query Frame = 0 

Query: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120
           NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK
Sbjct: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120

Query: 121 KWTQKNDGTIALADSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180
           KWTQKNDGTIAL DSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL
Sbjct: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180

Query: 181 QSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVVVSKCEDKP 240
           QSTDDSSHVGLNGCNT NKYQRWALYADGTIRQHVN NYCLTSDQDFGRFVVVSKCEDKP
Sbjct: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240

Query: 241 QQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 294
           QQRWSLDAKDYTIDHP+TDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN
Sbjct: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 293

[Close]
BLAST of CsGy3G018810 vs. TrEMBL
Match: tr|A0A0A0LAC2|A0A0A0LAC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217140 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 2.6e-144
Identity = 252/293 (86.01%), Postives = 268/293 (91.47%), Query Frame = 0 

Query: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM--SPWYKPA 60
           MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120

Query: 121 NKKWTQKNDGTIALADSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180
           NK+W  KNDGTIALA+SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180

Query: 181 CLQSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVVVSKCED 240
           CLQSTDDSS+VGLNGCNT+ KYQRWALYADGTIRQHVN NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240

Query: 241 KPQQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 292
           KPQQRWSL+AKD TIDHP+T+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 293

[Close]
BLAST of CsGy3G018810 vs. TrEMBL
Match: tr|A0A1S4E0X9|A0A1S4E0X9_CUCME (nigrin b-like OS=Cucumis melo OX=3656 GN=LOC103496121 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 2.0e-128
Identity = 227/292 (77.74%), Postives = 246/292 (84.25%), Query Frame = 0 

Query: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSIIVAFSLTT LA+AVP NYGYG  YGGVP ATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPRATHLVGRDGLCLEMSPWFY-RGN 60

Query: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPN 120
           NFPTRLSPCDE KKQTQLWT+VGDGTIRPMNDKFCL A+V  G+INKAVV EC K  + N
Sbjct: 61  NFPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGLINKAVVRECAKEPNSN 120

Query: 121 KKWTQKNDGTIALADSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLC 180
           K+WT K DGTI   +S MVLTGD DYVTLQSNK TPSQSWE TES   M+ANIEWLNNLC
Sbjct: 121 KRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNNLC 180

Query: 181 LQSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVVVSKCEDK 240
           LQSTDDS+HVGLNGCN  NK QRWALY DGTIRQ+VN NYCLTSD+  GRF+V+SKCEDK
Sbjct: 181 LQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCEDK 240

Query: 241 PQQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 292
           PQQRW+L AKD TIDHP++DMV+DV  VP   F S +VTNRRDGSASQRWTI
Sbjct: 241 PQQRWNLGAKDSTIDHPNSDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

[Close]
BLAST of CsGy3G018810 vs. TrEMBL
Match: tr|A0A0A0L756|A0A0A0L756_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.1e-109
Identity = 198/292 (67.81%), Postives = 227/292 (77.74%), Query Frame = 0 

Query: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSI+VAFSLTT LA+AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFY-KGS 60

Query: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPN 120
           NFPTRLSPC+E KKQTQLWT++ D TIRPMND++CL + V    I   VVSEC K    N
Sbjct: 61  NFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSN 120

Query: 121 KKWTQKNDGTIALADSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLC 180
           KKW  K D TI    S MVLTG+ +YVT+Q NK  PSQSWE T+SL  MVANI+WL NLC
Sbjct: 121 KKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLC 180

Query: 181 LQSTDDSSHVGLNGCNTHNKYQRWALYADGTIRQHVNTNYCLTSDQDFGRFVVVSKCEDK 240
           LQST DS++V L+GCN+ NK Q W+LY DGTIR+HVN NYCLTS+QDFGRFV VSKCEDK
Sbjct: 181 LQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDK 240

Query: 241 PQQRWSLDAKDYTIDHPSTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 292
           PQQRW L A+D TI+HP+TDMV+DV SVP    P  +VTN RDG+A+QRW I
Sbjct: 241 PQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWII 287

The following BLAST results are available for this feature:
BLAST of CsGy3G018810 vs. NCBI nr
Match NameE-valueIdentityDescription
NP_001274403.15.5e-17098.63uncharacterized protein LOC101221335 precursor [Cucumis sativus] >BAA88294.1 XSP... [more]
KGN57579.11.6e-16998.29hypothetical protein Csa_3G217160 [Cucumis sativus][more]
XP_004151509.24.0e-14486.01PREDICTED: nigrin b-like [Cucumis sativus] >KGN57577.1 hypothetical protein Csa_... [more]
XP_016901886.13.1e-12877.74PREDICTED: nigrin b-like [Cucumis melo][more]
XP_004146289.13.2e-10967.81PREDICTED: nigrin b-like [Cucumis sativus] >KGN57583.1 hypothetical protein Csa_... [more]
BLAST of CsGy3G018810 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G018810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P33183|NIGB_SAMNI1.4e-2632.17Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2[more]
sp|Q41358|SNAIB_SAMNI1.7e-2431.35Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1[more]
sp|O22415|SNAIF_SAMNI4.1e-2330.56Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=... [more]
sp|P02879|RICI_RICCO2.5e-2032.80Ricin OS=Ricinus communis OX=3988 PE=1 SV=1[more]
sp|Q9M6E9|AGGL_ABRPR5.5e-2030.74Agglutinin-1 OS=Abrus precatorius OX=3816 GN=AAG PE=1 SV=1[more]
BLAST of CsGy3G018810 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|Q9SLV9|Q9SLV9_CUCSA3.7e-17098.63XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1[more]
tr|A0A0A0L9D1|A0A0A0L9D1_CUCSA1.1e-16998.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1[more]
tr|A0A0A0LAC2|A0A0A0LAC2_CUCSA2.6e-14486.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217140 PE=4 SV=1[more]
tr|A0A1S4E0X9|A0A1S4E0X9_CUCME2.0e-12877.74nigrin b-like OS=Cucumis melo OX=3656 GN=LOC103496121 PE=4 SV=1[more]
tr|A0A0A0L756|A0A0A0L756_CUCSA2.1e-10967.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035992Ricin_B-like_lectins
IPR000772Ricin_B_lectin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G018810.1CsGy3G018810.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 36..162
e-value: 5.0E-9
score: 46.0
coord: 166..292
e-value: 1.1E-18
score: 78.0
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 176..289
e-value: 4.4E-23
score: 81.8
coord: 40..159
e-value: 1.3E-15
score: 57.7
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 176..292
score: 26.202
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 35..162
score: 20.362
IPR000772Ricin B, lectin domainCDDcd00161RICINcoord: 40..160
e-value: 2.54109E-17
score: 74.8494
IPR000772Ricin B, lectin domainCDDcd00161RICINcoord: 176..291
e-value: 5.15803E-21
score: 85.2498
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 167..293
e-value: 1.8E-29
score: 104.0
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 36..162
e-value: 1.1E-19
score: 72.4
IPR035992Ricin B-like lectinsSUPERFAMILYSSF50370Ricin B-like lectinscoord: 173..291
IPR035992Ricin B-like lectinsSUPERFAMILYSSF50370Ricin B-like lectinscoord: 40..164