CsGy3G018540 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G018540
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	sphingoid long-chain bases kinase 2, mitochondrial
Location	Chr3 : 14697661 .. 14703446 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGTCTCAAGCCCTAAAACCCAAATATTGCTTCTCTTCTCCATTCCCCTATCCCTCTATTTATAACCAAATATAACCCACTCCCTAACTATTTATGCCCTCAATACCCAAATAACCCCTAATACCGATCCTATTCGTCTCAAGGTGGTTTCAAAATGTAGACCATTTTGGAGGGAGCGGTGACTGCATTTTTACCATCTTTATTTAATTTCATCTATGTAGAATGCCATAACTCACAGGTTGATGACGGTGAATGGGAGCTGTATCCACAAGTAAATGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTATAATTCGTTTCTGTGGGATTTTATTTGATCACTTTTTCCTTGTCTTCTTAACTATGTGATGCTTTTCTTTGCAGGTAGTAATTCTTCAAGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAAAAGGTTAGTCATCTCTTTAAAAATTATAATGTGCCTAGATTTTCCATTTTGTATTTCAATTTTCTCTCTCCAACAGTCTGTTTTATGTTGGAGACTTGTGGAAGCAGAGGTGAAGAAACTATAATTGAACTGGATTTGCATGGAGCATTGTGATTTTCATTTCTGTCAAGTTTTTGCTTGAGAAAAACTTACACTCAAACTTATATGGAGATGCTTTATTTACCTAGCAGAGAAGCCCTTAGAAAAGTAATATTGTTAAACCTTCTTACTTCTGGCATTCTGATGTATCCTCAACCAAAATTAGAAAGTTATATGATTATCCTTTTTTCCTTGTTAAATCTTTGTCAACGTTGACGAACTCAATTAATCGATATCAATGTAACTCATCCATGGTTGAACATATGATTGAGCATGATTTCACATTTCAGCTCCACCTCATTAAAATTCATTGTTTGGCAATGATGCCCTTTTCTCAATCAAAACTTCCTATTTCTGCTTCTGAGCTTGTTCATCTGCAATGCAACTATCATCAGTTTATTGTTTTGTTGTTCAAGCAGCGTTCGTTCGATCGAAGTGGAAGAAGTTTCTTGCAGCGGCAGCTTATATGTTCAATCTGATGGGGAACACTTGGGGTTTCTTCCAAGGAAATTCCATATTCTAGCGGCTGCCATTGAAATGATATGCTGAACATGAGCTCCCTTTTGCAGAGAGAGAAAAACAATAAGCAAAAGCTTCGTAGCCGTAGGATCCTTTTTTTCTAACGTGGACTCCTCTCTCAAATTAGAGTAGACAAAGTAAGTTGTTATTTTACTTTTTTTTTGTATCGAAACCTTCTTTATACAAAAGCTTCATACTTTCATCCATGGCCAAATTAGAAAATAATGTTCACAATTTCTTGTCTTGTTAAATGAAATTTCACATTTTTTGAAAATTTTGGATTATAATTATTTGAAAAACAATTTTTTTTTTTGCTAACTTTACTGAAAATTTTGTTGCTTTACGGGTTACCCTTTTAGTTAATGGTTCTTATTTGACAATTTTTTTACCTTTAAGTTTTTCTCTTTGAAATTTGATTTTTTTAGTCTAATTTTTAAAAACAAAATATTTGTTTTAGTTCTTTTTTTTTTTTTTTTTTTTGCGTTTTAAATGGGCTTTATGACAAATAATTCAAATGTTTCTTAAATGGCTTTTCTTCTCTAACTCCTTTCTACTTTTTCCCTCCTCCCCCTTCTCTCTCTCTCATTTCAAATTTCTTCCCCCACTTCTTCTCTAACGGCTGCCTCTCTCTCTACTTTCTCTCTCTTCTCCCCTTCTCTCTCTCTCTCATTTCAAATTTCTTCCCCAACTTATTCTCTAACTACTGCCTCTCTCTCTCTACTTTCTCCCTCCTCTCCCCTTCTCTTACACTTTTCTACCGTGTTTAGGATATCTTCTTGTCAAATCGAACATTCAACGTATTTGTAATTGTGATTTTGGAATTAATGTTTGGTAAATTTCTTTTCATATCCACAGAATCAATGATTTTGAAGTGTTGAAACTTTCTTATTTAAATATTTTAAAGAGCTATGAGTTTTGAGGTGGAAAAGTTGTTCTCTCTGTGTTGTTTTTTCTCTCCGTTTTGTGGGGCTGTTTTGGATATGTTGTTTTTGGTTTTGGTTCTTTGGTGCTTTGTTGTCATTTCCTTTGGTGCTTTTGTTTTCTTCATCTGTTTGTGTTGGAACTCCAGTATGTAGTATTTCAATAGTAAACTTTATTGATGAATAACGATGTAAATCCTTAGTACAATATAAGAATGCAAAGACTCTCCAACTGTTTTAATTTTATTAAAGTACATTATATTCAATCTTCATTTTTCTTGGTTCTTCTGTAAATGATGTTTCTTCTATTATGGATTTGCATTATACAACACTGTCATATTAAGGCATAAAGTTACGAAAATTAGAAACATACCCTTTGTAGGTGAGAATGTTGTATGTATATATATATATATATATATATATATAAATTAGTTATCTTTTTTAGTCCTATATTGTAAAAAAAATATGATTGTTTGTTGAAAAAAAAAGGACAAAACAATGGACTAATGGACCGCTAATATGAGTCGGTGAACGAGATAATTAATTCTCCAAATCCACTTAAGCAAAATTAAAAAAAAAAAATCTAATAAAAACCCTACATGTATAGTCTCTCTCATTTCAAATTTCTTTCTCCTCTTCTCTAACGGCCAAGTCTCCCTCTCCTCCCCCCTTCTCTCTTGCTCTCTTGTCTTCTTTGGCCTATCTCTCAACAGAAACCCTATCATACCCATTTTGCGGATCCATCTCCATCTTCTTCTCTTAGTCGCGGATCCAATCTCCATCTTCTTCTCTTAGTCGCGCATCCAATCTCCATCTTCTTCTCTTAGTCGCGGATCCAATCTCCATCTTCTTCTCTCAGTCGCGGATCTAATCTCCATCTTCTTCTCTCAGTGCGTCCTTTCCATTTCTTCGTACACTCCATTTTCGAAACCCTATCATACCCATTTCACCCATCCATCTCCATCTTCTTCTCTTAGCGCGTCCTTTCCATTTCTTCTTCTTCTTCTTTGTTCGTACACTCCATTTTCCCTTTCTCTTCTCAAACCCTAATTCTTCTTTGTTCGTACAACCAAAACCAGTTTAACCAGTGTTGATTCCTCCTCTACTTCGACCTGTGATGCTCTTTTCTTCTTCCCTCGCAATTTCGATTCCACCATCCTCACCGATTTTGGTTGCAATTTCTACTCTCTTCAACCTCAACCTTCTGGATTCCCTCACTCTCACCGGATTGACTTCAATGTCCTTGGAACCTCCACTACTACTACTACTACTCCACTCATCAAAGAATCCGCTGGATTATCAGACGCTCCTCTTCCTTTCCTTTCTAATCCTTGTATCTCTTTCAACTCCAGCGGTGAGCCCCCGAACGAATCGCATTACTCCATGAGTTCTCAATTAATTCCATCTTTATTTAATATTCCATTGTCCTCTTTCCATTTGTTTCAATTATTGAATAGAAAGTTACTTGAATGAACTATGTTCTAATAATTTCATGTGGTTCTGGTAAAGCACAGTGCATCGGGTCGAACTTCCCCCATTATGTAATTTTATGGAGGTAGTTTTGTAAATTGGATTGAAACAGGGGCTATTCAATGTGTATGCATTAAAATATAGCTATTGTTTTCCAATTAAATATAAATCGATTGAGCCTCTGATGTGCTAGTAAGCATCAGATCTCCTCTATGTATATATAGTTAGGTACTCTTCTTTTTTTTATAGGTTCTGTCATATATATCACGGTCTGAAGTTGTAGCTGAACTTGCTTTCATCTTCAGTTTCTATCACTATTTAAAGGTCAGATTTTGTTCGATTAGAAGAATGTAAATTTGTCAAGGACAATAGCATGCTTAGTTTAATTGTACTCAAATATTGTTAATAAAACAATTGCTTTATTTGTGTGGTAGATCTCTTGATTCATTTTGATGTTTGTATTTTGAAGACATACAAAGGTCATAATACTAGTTGCTATTCTTTTTATCTTGGTACGTTTCATTTTTTTTTTAATATTTCACTGTCTCTATAATTGATTGTACAAACATATCTCATCATTCAATCACTTTTCAAGTTTTAGATTCTGAAATTTGTACATATTGGGGTTTTCCTTTTTCTTTATTTTGGATTATTTCAAATCTCCAAAGATCTTTCTTGTAACATTTGCATATTTTAGTTTATTAAAATCTTCGAAAGTAGAGGAGAAGGCTCCAAAAGCATTCTGTCTCTCATTGCCTTGCCCTAACATTATCATCTGTGTAAGATGTGCCAATGAGTAGACCATGTTCTTTTACTTTTTTTTCCATAGCTTTTGAACCACTTTCCCTTTCTCTCCTTCTCTTTCATTCTTCTTTTATGTTAATTGGAAGAAGCTTTCAGGCCTCTCTTGAAAATAATGAGGTTTTGAAGGGGATAGAAAGAGAGTGATGGTGGGATCCATCAAAGGTTTGGGATTTCACATAATGTTCGCATCACTCTTTTAAATGTAATTAGAGGTTGAGTTGATCGCCGATCATAGATAAGGAGGGGCTGGTTAGTGGCTTGAAAAAGGATTCAGACAACATTAATTTTTTCTAAAAAATAAAACCAACCTTCCGACGGTTGGTTAACACTCCTCGACAGTTGAGATAGGGTAAGACTTGTATTCTAGTTCTGTTGGTACCTGTATTTGTGCTTCATCACTTCATAATTGTACTTTTATTTATCCCCTTTGTATGTTTCCATGTGTTTCATGTTTGTCTTTTATGTTTCTTCTATTTATATATTTCTTCATGTTCTTCTCCATTCGGGTTTGCTCTTGCGGAGGTTACACATTCATTGTTGTGCTGGTACTTTAGTTAATGATGTCAAGTAATTTTTGTTTTGCAAATTTTCTTGTTAGTGCTCAAGTTTGATTTCATACTGCCTTTAGCATAGCTTTACGATTGCAGAATTCTTGCACATTGCCCTTTTTATTTTGTTATTACTGATGGACTTATTTGTGATACCTTTAAAGAAGAAAATTTATGGCTATTTGTGTTGAAGTTTTTTTTTTTTTGATTATTGGTTGGTTTTTCCCTCCACTTTTCTTAATATTTTGAAGTGTGTAATAAGGTAAGCAATTTTTTAGTCCCTAAATTTGTTTTGTTGATGAATTGTTTCCTTTTTTTTTTCTCGGTTTTGTTTTCAGGTTTTCATCATTATTCATTTGGTGGCTAAATATTACTCATGGGTATTTGTTCGATCTTATTTTGTTGTGATCAATTGATATACATAATATGCACTATAAATTTGTTAAATTGTTGGATTATTTGCTTTTTTAATAAGGTTGGAGGAACCTCAAGGTACGTTTTGTTAAAGCATATTTTATATTGATAAATTTGAAGTTGTCAAGTCTATAACAATGATAATGTTAATACGAGTAAATTTATAGCAAATTTAGTTGACTTAACTTATTTACATGTTGGTTGCTCGGACTCTTGGAAAAACCTTACGTGCATTTTAACCCACGATAAGAGAACTTAAGGTTGTTATGACTTACATATCAGTTTTTGAGATTTTCCTTTATAACTTTTTCATAGACCTTATTGTAGTTTTTTGTCCTTTATTTTTGTTTGTAGGACGTTTCTAGAGAATGCAAGACCATGTTTGAGTGAGAAATTGGTCTCGATGAAATTGAGAGTTCAATGAACAGCACATACA

mRNA sequence

ATAGTCTCAAGCCCTAAAACCCAAATATTGCTTCTCTTCTCCATTCCCCTATCCCTCTATTTATAACCAAATATAACCCACTCCCTAACTATTTATGCCCTCAATACCCAAATAACCCCTAATACCGATCCTATTCGTCTCAAGAATGCCATAACTCACAGGTTGATGACGGTGAATGGGAGCTGTATCCACAAGTAAATGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTAGTAATTCTTCAAGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAAAAGCGTTCGTTCGATCGAAGTGGAAGAAGTTTCTTGCAGCGGCAGCTTATATGTTCAATCTGATGGGGAACACTTGGGGTTTCTTCCAAGGAAATTCCATATTCTAGCGGCTGCCATTGAAATGATATGCTGAACATGAGCTCCCTTTTGCAGAGAGAGAAAAACAATAAGCAAAAGCTTCGTAGCCGTAGGATCCTTTTTTTCTAACGTGGACTCCTCTCTCAAATTAGAGTAGACAAAGTTCTGTCATATATATCACGGTCTGAAGTTGTAGCTGAACTTGCTTTCATCTTCAGTTTCTATCACTATTTAAAGGTTTTCATCATTATTCATTTGGTGGCTAAATATTACTCATGGGTATTTGTTCGATCTTATTTTGTTGTGATCAATTGATATACATAATATGCACTATAAATTTGTTAAATTGTTGGATTATTTGCTTTTTTAATAAGGTTGGAGGAACCTCAAGGTACGTTTTGTTAAAGCATATTTTATATTGATAAATTTGAAGTTGTCAAGTCTATAACAATGATAATGTTAATACGAGTAAATTTATAGCAAATTTAGTTGACTTAACTTATTTACATGTTGGTTGCTCGGACTCTTGGAAAAACCTTACGTGCATTTTAACCCACGATAAGAGAACTTAAGGACGTTTCTAGAGAATGCAAGACCATGTTTGAGTGAGAAATTGGTCTCGATGAAATTGAGAGTTCAATGAACAGCACATACA

Coding sequence (CDS)

ATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTAGTAATTCTTCAAGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAAAAGCGTTCGTTCGATCGAAGTGGAAGAAGTTTCTTGCAGCGGCAGCTTATATGTTCAATCTGATGGGGAACACTTGGGGTTTCTTCCAAGGAAATTCCATATTCTAGCGGCTGCCATTGAAATGATATGCTGA

Protein sequence

MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSCSGSLYVQSDGEHLGFLPRKFHILAAAIEMIC

Homology

[Close]

BLAST of CsGy3G018540 vs. NCBI nr
Match: KGN44405.1 (hypothetical protein Csa_7G280850 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 3.6e-43
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTS+SVRSIEVEEVSC
Sbjct: 151 MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSVRSIEVEEVSC 210

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMIC 92
           SGS+YVQSDGEHLGFLPRKFHIL AAIEMIC
Sbjct: 211 SGSIYVQSDGEHLGFLPRKFHILPAAIEMIC 241

[Close]

BLAST of CsGy3G018540 vs. NCBI nr
Match: KGN57554.1 (hypothetical protein Csa_3G211980 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 3.6e-43
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTS+SVRSIEVEEVSC
Sbjct: 210 MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSVRSIEVEEVSC 269

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMIC 92
           SGS+YVQSDGEHLGFLPRKFHIL AAIEMIC
Sbjct: 270 SGSIYVQSDGEHLGFLPRKFHILPAAIEMIC 300

[Close]

BLAST of CsGy3G018540 vs. NCBI nr
Match: XP_011652782.1 (PREDICTED: uncharacterized protein LOC105435092 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 3.6e-43
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTS+SVRSIEVEEVSC
Sbjct: 569 MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSVRSIEVEEVSC 628

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMIC 92
           SGS+YVQSDGEHLGFLPRKFHIL AAIEMIC
Sbjct: 629 SGSIYVQSDGEHLGFLPRKFHILPAAIEMIC 659

[Close]

BLAST of CsGy3G018540 vs. NCBI nr
Match: XP_011659752.1 (PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 3.6e-43
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTS+SVRSIEVEEVSC
Sbjct: 152 MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSVRSIEVEEVSC 211

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMIC 92
           SGS+YVQSDGEHLGFLPRKFHIL AAIEMIC
Sbjct: 212 SGSIYVQSDGEHLGFLPRKFHILPAAIEMIC 242

[Close]

BLAST of CsGy3G018540 vs. NCBI nr
Match: KGN45691.1 (hypothetical protein Csa_6G006770 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 4.0e-42
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKIVPN DPSNRSLEVVILQDFKWYDFILNLHKIYNGT+LTVKNVTS+SVRSIEVEEVSC
Sbjct: 115 MKIVPNVDPSNRSLEVVILQDFKWYDFILNLHKIYNGTHLTVKNVTSRSVRSIEVEEVSC 174

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMIC 92
           SGS+YVQSDGEHLGFLPRKFHIL AAIEMIC
Sbjct: 175 SGSIYVQSDGEHLGFLPRKFHILPAAIEMIC 205

[Close]

BLAST of CsGy3G018540 vs. TAIR10
Match: AT2G46090.1 (Diacylglycerol kinase family protein)

HSP 1 Score: 142.9 bits (359), Expect = 9.7e-35
Identity = 65/90 (72.22%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKI PNA P N +LEVV+LQ+FKWYDF+L LHK+YNGT+L+V NVTS+SV+SIEVEE++ 
Sbjct: 274 MKITPNAIPGNGNLEVVVLQNFKWYDFVLKLHKLYNGTHLSVNNVTSRSVQSIEVEEITD 333

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMI 91
           SGS+YVQSDGEHLGFLPRKF +L  AI++I
Sbjct: 334 SGSIYVQSDGEHLGFLPRKFQVLPGAIDII 363

[Close]

BLAST of CsGy3G018540 vs. Swiss-Prot
Match: sp|O82359|LCKB2_ARATH (Sphingoid long-chain bases kinase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LCKB2 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.8e-33
Identity = 65/90 (72.22%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKI PNA P N +LEVV+LQ+FKWYDF+L LHK+YNGT+L+V NVTS+SV+SIEVEE++ 
Sbjct: 274 MKITPNAIPGNGNLEVVVLQNFKWYDFVLKLHKLYNGTHLSVNNVTSRSVQSIEVEEITD 333

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMI 91
           SGS+YVQSDGEHLGFLPRKF +L  AI++I
Sbjct: 334 SGSIYVQSDGEHLGFLPRKFQVLPGAIDII 363

[Close]

BLAST of CsGy3G018540 vs. TrEMBL
Match: tr|A0A0A0K3Y3|A0A0A0K3Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G280850 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.4e-43
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTS+SVRSIEVEEVSC
Sbjct: 151 MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSVRSIEVEEVSC 210

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMIC 92
           SGS+YVQSDGEHLGFLPRKFHIL AAIEMIC
Sbjct: 211 SGSIYVQSDGEHLGFLPRKFHILPAAIEMIC 241

[Close]

BLAST of CsGy3G018540 vs. TrEMBL
Match: tr|A0A0A0L9B2|A0A0A0L9B2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G211980 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.4e-43
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTS+SVRSIEVEEVSC
Sbjct: 210 MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSVRSIEVEEVSC 269

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMIC 92
           SGS+YVQSDGEHLGFLPRKFHIL AAIEMIC
Sbjct: 270 SGSIYVQSDGEHLGFLPRKFHILPAAIEMIC 300

[Close]

BLAST of CsGy3G018540 vs. TrEMBL
Match: tr|A0A0A0KD28|A0A0A0KD28_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006770 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-42
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKIVPN DPSNRSLEVVILQDFKWYDFILNLHKIYNGT+LTVKNVTS+SVRSIEVEEVSC
Sbjct: 115 MKIVPNVDPSNRSLEVVILQDFKWYDFILNLHKIYNGTHLTVKNVTSRSVRSIEVEEVSC 174

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMIC 92
           SGS+YVQSDGEHLGFLPRKFHIL AAIEMIC
Sbjct: 175 SGSIYVQSDGEHLGFLPRKFHILPAAIEMIC 205

[Close]

BLAST of CsGy3G018540 vs. TrEMBL
Match: tr|A0A1S3C7U6|A0A1S3C7U6_CUCME (sphingoid long-chain bases kinase 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497689 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.4e-42
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKIVPNADPSN SLEVVILQDFKWYDFILNLHKIYNGT+LTVKNVTSKS+RSIEVEEVSC
Sbjct: 276 MKIVPNADPSNGSLEVVILQDFKWYDFILNLHKIYNGTHLTVKNVTSKSIRSIEVEEVSC 335

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMIC 92
           SGS+YVQSDGEHLGFLPRKFHIL AAIEMIC
Sbjct: 336 SGSIYVQSDGEHLGFLPRKFHILPAAIEMIC 366

[Close]

BLAST of CsGy3G018540 vs. TrEMBL
Match: tr|W9QR95|W9QR95_9ROSA (Diacylglycerol kinase OS=Morus notabilis OX=981085 GN=L484_012929 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 9.0e-35
Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 1   MKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSKSVRSIEVEEVSC 60
           MKI PNADPSN +LEVVILQDFKWYDFIL LHK+YNGT+L+VKNV+S SVRSIEVE++S 
Sbjct: 192 MKITPNADPSNGTLEVVILQDFKWYDFILKLHKLYNGTHLSVKNVSSISVRSIEVEDISG 251

Query: 61  SGSLYVQSDGEHLGFLPRKFHILAAAIEMIC 92
           SGS++VQSDGEHLGFLPRKF I+  AIEMIC
Sbjct: 252 SGSIFVQSDGEHLGFLPRKFRIIPGAIEMIC 282

The following BLAST results are available for this feature:

BLAST of CsGy3G018540 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44405.1	3.6e-43	96.70	hypothetical protein Csa_7G280850 [Cucumis sativus]	[more]
KGN57554.1	3.6e-43	96.70	hypothetical protein Csa_3G211980 [Cucumis sativus]	[more]
XP_011652782.1	3.6e-43	96.70	PREDICTED: uncharacterized protein LOC105435092 [Cucumis sativus]	[more]
XP_011659752.1	3.6e-43	96.70	PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial-like [Cucumis sati...	[more]
KGN45691.1	4.0e-42	94.51	hypothetical protein Csa_6G006770 [Cucumis sativus]	[more]

BLAST of CsGy3G018540 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46090.1	9.7e-35	72.22	Diacylglycerol kinase family protein	[more]

BLAST of CsGy3G018540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O82359\|LCKB2_ARATH	1.8e-33	72.22	Sphingoid long-chain bases kinase 2, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]

BLAST of CsGy3G018540 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K3Y3\|A0A0A0K3Y3_CUCSA	2.4e-43	96.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G280850 PE=4 SV=1	[more]
tr\|A0A0A0L9B2\|A0A0A0L9B2_CUCSA	2.4e-43	96.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G211980 PE=4 SV=1	[more]
tr\|A0A0A0KD28\|A0A0A0KD28_CUCSA	2.6e-42	94.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006770 PE=4 SV=1	[more]
tr\|A0A1S3C7U6\|A0A1S3C7U6_CUCME	3.4e-42	94.51	sphingoid long-chain bases kinase 2, mitochondrial OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|W9QR95\|W9QR95_9ROSA	9.0e-35	80.22	Diacylglycerol kinase OS=Morus notabilis OX=981085 GN=L484_012929 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016064	NAD/diacylglycerol_kinase_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003951	NAD+ kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G018540.1	CsGy3G018540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.60.200.40		coord: 1..84 e-value: 3.7E-12 score: 48.0
None	No IPR available	PANTHER	PTHR12358	SPHINGOSINE KINASE	coord: 1..91
None	No IPR available	PANTHER	PTHR12358:SF54	SPHINGOSINE KINASE RELATED PROTEIN	coord: 1..91
IPR016064	NAD kinase/diacylglycerol kinase-like domain superfamily	SUPERFAMILY	SSF111331	NAD kinase/diacylglycerol kinase-like	coord: 1..91

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G018540	CsaV3_3G018770	Cucumber (Chinese Long) v3	cgybcucB117

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G018540	Watermelon (97103) v2	cgybwmbB206
CsGy3G018540	Wax gourd	cgybwgoB271
CsGy3G018540	Cucurbita maxima (Rimu)	cgybcmaB332
CsGy3G018540	Cucurbita maxima (Rimu)	cgybcmaB410
CsGy3G018540	Cucurbita moschata (Rifu)	cgybcmoB301
CsGy3G018540	Cucurbita moschata (Rifu)	cgybcmoB386
CsGy3G018540	Cucurbita pepo (Zucchini)	cgybcpeB317
CsGy3G018540	Cucurbita pepo (Zucchini)	cgybcpeB362
CsGy3G018540	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G018540	Bottle gourd (USVL1VR-Ls)	cgyblsiB198
CsGy3G018540	Melon (DHL92) v3.5.1	cgybmeB210
CsGy3G018540	Melon (DHL92) v3.6.1	cgybmedB215
CsGy3G018540	Watermelon (Charleston Gray)	cgybwcgB214
CsGy3G018540	Watermelon (97103) v1	cgybwmB229
CsGy3G018540	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G018540	Silver-seed gourd	carcgybB0380
CsGy3G018540	Silver-seed gourd	carcgybB0650