CsGy3G018370 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G018370
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein disulfide-isomerase SCO2
Location	Chr3 : 14533971 .. 14536742 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGAAAAAGAAAAAAGAAAAGAAAGGGGTCGGTGGGCCCAGTTGATCTTCTCGTTGGAGGGCAGCTCCAATCTTCCATCACCACCTGCCCATTCCACTGCCTATGAACTCGACGGTGCCCACAATTCATACTTTCCCTCCTCCGTCCACGCCTCCCCTGTTCCATACAACCTGACAAATTCCGATTGGGTTCAACATTTCGGCTAATGTTCGCCATTAATCCTTCTTCCTTTTTCTTCCCTTCCAATCCCACCACTGCAACTGCACGTCAACATTCCATCTCTCCCCCCTCCTCCTTCCGTCTTTCCCTTGCCGCTACCGGAGACGCCTCCCCTGACCCCTCAATTTCCCGCCTCTTCAATTTCCCTTCTCTTTCTGCCACCGACGCTACCGGCGGCTTTCGTCTTGGACAAGACTACGATGCCGGAGCTTCCTCCCCCGTTATCGATGGACCGGGGAGGTTCGCCAGAGGAAATGGCACCGTCAAAGTGAACGCCATGGAGAAAAAATGGTCTCGTGATAGAGAGAGTTATTTAGTCGATGATAGCGATGTTCTCCCTCTTCCTATGACTTACCCGGATTCTTCCCCTGTATCGCCGGATGAGATCGACCGTCGGCTTCGGTGCGATCCACAAGTGGAGGTCTGTTATTCATCTGATAACTTTGATTCATAGTATCATCTTTTGCTTTTGACAGTTTTACTTTTTCCTATTTGTGAAAAGCGATTTATCGTGATTTTTCTGCCTAGTTGTGCCCTAACTCCCGTGCTCTTGATTTATTTGAGGAGGCTATTTCGTATTGATTTCTAAAATAACTTTCTAGATTGATTCAAATCATTTGGAAACTGGAATTTTGTTGGTAACAGTTCAAGCATTGATGTAACCAACAAGCATTAGCATGCTTTAGCTGAGGTGTATCACCTCAATTTTAGGCTGCGTTGGTGGGATTTAAGCTATTTTCCCAACCTCACAGTTATCTCCATTTTCGGAGTTTTAGAGTTTAAGCCATTGTTGTAAATTGTAGGATTGTAAAGAAGTGGTGTATGAATGGACCGGGAAGTGTCGCAGTTGCCAAGGGTCTGGATATGTTAGCTATTATAACAAAAGGGGAAGAGAGATCACTTGCAAATGTATACCTTGCCTTGGAATTGGTATTCTTCTTCTTCTTCCTTCCTCCTTTCCATCTTTCCTATGGGAACCAACACATAGTGCAAATTGTAGGGTATTGCAATGTTATGTTATAAGGGTTTTACTGACAAGTGACAACCTTCATATATCATGAAAATATAATAACACTCATGCTAATATTCTGACTGAGTTCAACCTCATGCGGAGCGGAGGATTTGATCCCTTTACCTCATGATTGAGGGAGGTTATATGTTTGAATTAGTTATCATGATTGAGTGAGGTTATATGTTTGAGTTAGTTGAGTTATGTTCAGGTTGTTGATGCTACTCATAGTTCTTGCTTGCAATCTTCATTGATGCGCTTTAGACAGTGACAGATATGAGCGTTAGGAGCCAAAGGGAATTACCCAAGAATTTCTGATCATAATTGAAGTTCTTTTAAAGAATGGACAATAATCCTTGCTTTTTATCTTCACATTTGATAAATTGGTTCCTTCGTTACTCTGCTTTCTGTCAGATTAAGGACTTTGATCATTGTGGTTTTGAATGTATCTCAAGACATATGCCAACTAGAGGCTCTCTTACACTAACAATTGGCCCCATTTGGTAACTGTATTGTTTTTTATTTTTGGTTTTTGAAAATTAAGCCTATAGACACTACTTCTACCTCTAAGTTTCTTCATTTGTATCTAAGTCTAAAAAAGTAAACCAAAATTTGAAAACTAAAAAGAGTAGCTTTTAAAAACTTGTTTTTGTTTTTGGAATTTGGTTAAGAATTCAACCATGCATATCATAGTAAGAAATGAAGAAAAAATATGCTTAATTTTTAAAAACCAAAAACACAAAACGAGATGGTTACCAAATGGAGTGGAAAATATTCATGCATTCTGCGGCAGGAGAAAAAAAAACATTTGCCTAACTGAAGTTAAATAAATTGATATTTTCAACAAATCTTCATTGTTTGCTGATCCTTTGTCTGCATTTCAACGTTTCTTCTCCCTTTGTATAAAGAGAATTTCTCCAAGCTTTTGTTGCAACCAACATTTTGACAAAACTGTGATGTAACTTTTGAGACCATGTTGGTTGTTTTTCCATATCAAAATCTCAGTTCAAATTTGCCTCTTCTTCTTGTTTGCAATCCTGCAGGGTATGTTCAGAAGATAACGGCTCGAAAGGACATTGAACTAATGGAGGATTTGGATAATAACGGAAAGCCATTGTGATTCAATGCCTGTTTTGAAAATCTACACATCTCTATCTAACTTCACCTTTGAGGGGCTGTAATTTTTCACGCAGAAGTTATTTAGATTAGGTTTTGTATTGATGATAGGCAAAATAAACACATGGAGAGAATATTGAACACAGTGGCGAAATAAAAGTAATGCTCATTTGGTAGTGAGTTGTAGCTTCAGCTTCCTTCTTGACTATCTCTTGGATTGTCATAATGCCCTATTACATCTACTGTTAGTATTACTATTAGGTCTATTTTGTTAAATTATAATATAATGGTATTCTAACCTGAACTTGGAACGTACTCATTTGTTTGAGATTGGACATTCAAATTCTTATGTCTCTACATTGTTAAAAAAAACCTATAAATCTAGATCAAAATTTAAATAATCTAACTTTAGTTGGTTTGTTC

mRNA sequence

AAAAAAAGAAAAAGAAAAAAGAAAAGAAAGGGGTCGGTGGGCCCAGTTGATCTTCTCGTTGGAGGGCAGCTCCAATCTTCCATCACCACCTGCCCATTCCACTGCCTATGAACTCGACGGTGCCCACAATTCATACTTTCCCTCCTCCGTCCACGCCTCCCCTGTTCCATACAACCTGACAAATTCCGATTGGGTTCAACATTTCGGCTAATGTTCGCCATTAATCCTTCTTCCTTTTTCTTCCCTTCCAATCCCACCACTGCAACTGCACGTCAACATTCCATCTCTCCCCCCTCCTCCTTCCGTCTTTCCCTTGCCGCTACCGGAGACGCCTCCCCTGACCCCTCAATTTCCCGCCTCTTCAATTTCCCTTCTCTTTCTGCCACCGACGCTACCGGCGGCTTTCGTCTTGGACAAGACTACGATGCCGGAGCTTCCTCCCCCGTTATCGATGGACCGGGGAGGTTCGCCAGAGGAAATGGCACCGTCAAAGTGAACGCCATGGAGAAAAAATGGTCTCGTGATAGAGAGAGTTATTTAGTCGATGATAGCGATGTTCTCCCTCTTCCTATGACTTACCCGGATTCTTCCCCTGTATCGCCGGATGAGATCGACCGTCGGCTTCGGTGCGATCCACAAGTGGAGGATTGTAAAGAAGTGGTGTATGAATGGACCGGGAAGTGTCGCAGTTGCCAAGGGTCTGGATATGTTAGCTATTATAACAAAAGGGGAAGAGAGATCACTTGCAAATGTATACCTTGCCTTGGAATTGGGTATGTTCAGAAGATAACGGCTCGAAAGGACATTGAACTAATGGAGGATTTGGATAATAACGGAAAGCCATTGTGATTCAATGCCTGTTTTGAAAATCTACACATCTCTATCTAACTTCACCTTTGAGGGGCTGTAATTTTTCACGCAGAAGTTATTTAGATTAGGTTTTGTATTGATGATAGGCAAAATAAACACATGGAGAGAATATTGAACACAGTGGCGAAATAAAAGTAATGCTCATTTGGTAGTGAGTTGTAGCTTCAGCTTCCTTCTTGACTATCTCTTGGATTGTCATAATGCCCTATTACATCTACTGTTAGTATTACTATTAGGTCTATTTTGTTAAATTATAATATAATGGTATTCTAACCTGAACTTGGAACGTACTCATTTGTTTGAGATTGGACATTCAAATTCTTATGTCTCTACATTGTTAAAAAAAACCTATAAATCTAGATCAAAATTTAAATAATCTAACTTTAGTTGGTTTGTTC

Coding sequence (CDS)

ATGTTCGCCATTAATCCTTCTTCCTTTTTCTTCCCTTCCAATCCCACCACTGCAACTGCACGTCAACATTCCATCTCTCCCCCCTCCTCCTTCCGTCTTTCCCTTGCCGCTACCGGAGACGCCTCCCCTGACCCCTCAATTTCCCGCCTCTTCAATTTCCCTTCTCTTTCTGCCACCGACGCTACCGGCGGCTTTCGTCTTGGACAAGACTACGATGCCGGAGCTTCCTCCCCCGTTATCGATGGACCGGGGAGGTTCGCCAGAGGAAATGGCACCGTCAAAGTGAACGCCATGGAGAAAAAATGGTCTCGTGATAGAGAGAGTTATTTAGTCGATGATAGCGATGTTCTCCCTCTTCCTATGACTTACCCGGATTCTTCCCCTGTATCGCCGGATGAGATCGACCGTCGGCTTCGGTGCGATCCACAAGTGGAGGATTGTAAAGAAGTGGTGTATGAATGGACCGGGAAGTGTCGCAGTTGCCAAGGGTCTGGATATGTTAGCTATTATAACAAAAGGGGAAGAGAGATCACTTGCAAATGTATACCTTGCCTTGGAATTGGGTATGTTCAGAAGATAACGGCTCGAAAGGACATTGAACTAATGGAGGATTTGGATAATAACGGAAAGCCATTGTGA

Protein sequence

MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATDATGGFRLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLPMTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIGYVQKITARKDIELMEDLDNNGKPL

Homology

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BLAST of CsGy3G018370 vs. NCBI nr
Match: XP_004140700.2 (PREDICTED: protein disulfide-isomerase SCO2 [Cucumis sativus] >KGN57535.1 hypothetical protein Csa_3G207360 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 6.3e-107
Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60
           MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD
Sbjct: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60

Query: 61  ATGGFRLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120
           ATGGF LGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP
Sbjct: 61  ATGGFSLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120

Query: 121 MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX 180
           MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX
Sbjct: 121 MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX 180

Query: 181 XXXXXXXXXXXKITARKDIELMEDLDNNGKPL 213
           XXXXXXXXXXXKITARKDIELMEDLDNNGKPL
Sbjct: 181 XXXXXXXXXXXKITARKDIELMEDLDNNGKPL 212

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BLAST of CsGy3G018370 vs. NCBI nr
Match: XP_008456126.1 (PREDICTED: protein disulfide-isomerase SCO2 [Cucumis melo])

HSP 1 Score: 361.7 bits (927), Expect = 1.7e-96
Identity = 196/212 (92.45%), Postives = 200/212 (94.34%), Query Frame = 0


Query: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60
           MFAINPSS FFPSNPT  T RQHSISPPSSFRL  AATGDASP+PSISRLFNFPSLSATD
Sbjct: 1   MFAINPSSLFFPSNPT--TPRQHSISPPSSFRLYGAATGDASPEPSISRLFNFPSLSATD 60

Query: 61  ATGGFRLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120
           AT GFRLGQDYDAGASSP +D PGRF RGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP
Sbjct: 61  ATAGFRLGQDYDAGASSPAVDAPGRFGRGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120

Query: 121 MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX 180
           M YPDSSPVSPDEIDRRL+CDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX
Sbjct: 121 MAYPDSSPVSPDEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX 180

Query: 181 XXXXXXXXXXXKITARKDIELMEDLDNNGKPL 213
           XXXXXXXXXXXKITARKDIELMEDLDN+GK L
Sbjct: 181 XXXXXXXXXXXKITARKDIELMEDLDNDGKLL 210

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BLAST of CsGy3G018370 vs. NCBI nr
Match: XP_022941608.1 (protein disulfide-isomerase SCO2 [Cucurbita moschata])

HSP 1 Score: 317.0 bits (811), Expect = 4.8e-83
Identity = 162/212 (76.42%), Postives = 173/212 (81.60%), Query Frame = 0


Query: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60
           MFA+NP+S FFPSNPT    RQ SIS   SFR S AA GDAS  PS SRLFNFPS+SATD
Sbjct: 1   MFAVNPTSLFFPSNPT--ATRQQSISLSPSFRRSCAAAGDASVGPSFSRLFNFPSVSATD 60

Query: 61  ATGGFRLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120
           ATGGFRLGQ+YD GASS  +DG GR   GNG+VK NAMEKKWSRDRESYLVD S+VLPLP
Sbjct: 61  ATGGFRLGQEYDGGASSGSVDGVGRSGSGNGSVKANAMEKKWSRDRESYLVDSSEVLPLP 120

Query: 121 MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX 180
           MTYPDSSPV+P+EIDRRL+CDPQVEDCKEVVYEWTGKCRSCQGSG+VSYYNKRGREI   
Sbjct: 121 MTYPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKRGREITCK 180

Query: 181 XXXXXXXXXXXKITARKDIELMEDLDNNGKPL 213
                      KITARKDIELMEDLD NGKPL
Sbjct: 181 CIPCLGVGYVQKITARKDIELMEDLD-NGKPL 209

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BLAST of CsGy3G018370 vs. NCBI nr
Match: XP_023517721.1 (protein disulfide-isomerase SCO2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.5 bits (802), Expect = 5.4e-82
Identity = 160/212 (75.47%), Postives = 172/212 (81.13%), Query Frame = 0


Query: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60
           MFA+NP+S FFPSNPT    RQ SIS   S R S AA GDAS  PS SRLFNFPS+SATD
Sbjct: 1   MFAVNPTSLFFPSNPT--ATRQQSISLSPSLRRSCAAAGDASVGPSFSRLFNFPSVSATD 60

Query: 61  ATGGFRLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120
           ATGGFRLGQ+YD GASS  +DG GR   GNG+VK NAMEKKWSRDRESYLVD S+VLPLP
Sbjct: 61  ATGGFRLGQEYDGGASSGSVDGVGRSGSGNGSVKANAMEKKWSRDRESYLVDSSEVLPLP 120

Query: 121 MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX 180
           MTYPDSSPV+P+EIDRRL+CDPQVEDCKEVVYEWTGKCRSCQGSG+VSYYNK+GREI   
Sbjct: 121 MTYPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKKGREITCK 180

Query: 181 XXXXXXXXXXXKITARKDIELMEDLDNNGKPL 213
                      KITARKDIELMEDLD NGKPL
Sbjct: 181 CIPCLGVGYVQKITARKDIELMEDLD-NGKPL 209

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BLAST of CsGy3G018370 vs. NCBI nr
Match: XP_022982746.1 (protein disulfide-isomerase SCO2 [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 9.1e-82
Identity = 164/212 (77.36%), Postives = 174/212 (82.08%), Query Frame = 0


Query: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60
           MFA+NP+S FFPSNPT    RQ SIS   SFR S A  GDAS  PS SRLFNFPS+SATD
Sbjct: 1   MFAVNPTSLFFPSNPT--ATRQQSISLSPSFRRSCATAGDASVGPSFSRLFNFPSVSATD 60

Query: 61  ATGGFRLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120
           ATGGFRLGQ+YD GASS  +DG GR   GNG VK NAMEKKWSRDRESYLVD S+VLPLP
Sbjct: 61  ATGGFRLGQEYDGGASSGTVDGVGRSGSGNGRVKANAMEKKWSRDRESYLVDSSEVLPLP 120

Query: 121 MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX 180
           MTYPDSSPV P+EIDRRL+CDPQVEDCKEVVYEWTGKCRSCQGSG+VSYY+KRGREI   
Sbjct: 121 MTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYSKRGREITCK 180

Query: 181 XXXXXXXXXXXKITARKDIELMEDLDNNGKPL 213
             XXXX     KITARKDIELMEDLD NGKPL
Sbjct: 181 CIXXXXVGYVQKITARKDIELMEDLD-NGKPL 209

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BLAST of CsGy3G018370 vs. TAIR10
Match: AT3G19220.1 (protein disulfide isomerases)

HSP 1 Score: 164.5 bits (415), Expect = 7.3e-41
Identity = 84/145 (57.93%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 64  GFRLGQDYDAGASSPVIDGPGRFARGNGT-VKVNAMEKKWSRDRESYLVDDSDVLPLPMT 123
           G RL ++ D+ + +         A GNG   K       WS+  ESYLVDD D LPLPMT
Sbjct: 40  GIRLPREADSTSDTARSRDVSVAAGGNGEGAKWRKRRLLWSKSGESYLVDDGDALPLPMT 99

Query: 124 YPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXXXX 183
           YPD+SPVSPD IDRRL+CDP VEDC+EVVYEWTGKCRSCQGSG VSYY KRG+E+     
Sbjct: 100 YPDTSPVSPDVIDRRLQCDPVVEDCREVVYEWTGKCRSCQGSGTVSYYKKRGKEVICKCI 159

Query: 184 XXXXXXXXXKITARKDIELMEDLDN 208
                    KIT+R DIE+MEDLDN
Sbjct: 160 PCQGIGYVQKITSRTDIEVMEDLDN 184

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BLAST of CsGy3G018370 vs. Swiss-Prot
Match: sp|Q93YN0|SCO2_ARATH (Protein disulfide-isomerase SCO2 OS=Arabidopsis thaliana OX=3702 GN=SCO2 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-39
Identity = 84/145 (57.93%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 64  GFRLGQDYDAGASSPVIDGPGRFARGNGT-VKVNAMEKKWSRDRESYLVDDSDVLPLPMT 123
           G RL ++ D+ + +         A GNG   K       WS+  ESYLVDD D LPLPMT
Sbjct: 40  GIRLPREADSTSDTARSRDVSVAAGGNGEGAKWRKRRLLWSKSGESYLVDDGDALPLPMT 99

Query: 124 YPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXXXX 183
           YPD+SPVSPD IDRRL+CDP VEDC+EVVYEWTGKCRSCQGSG VSYY KRG+E+     
Sbjct: 100 YPDTSPVSPDVIDRRLQCDPVVEDCREVVYEWTGKCRSCQGSGTVSYYKKRGKEVICKCI 159

Query: 184 XXXXXXXXXKITARKDIELMEDLDN 208
                    KIT+R DIE+MEDLDN
Sbjct: 160 PCQGIGYVQKITSRTDIEVMEDLDN 184

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BLAST of CsGy3G018370 vs. TrEMBL
Match: tr|A0A0A0L6G9|A0A0A0L6G9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207360 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 4.2e-107
Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60
           MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD
Sbjct: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60

Query: 61  ATGGFRLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120
           ATGGF LGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP
Sbjct: 61  ATGGFSLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120

Query: 121 MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX 180
           MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX
Sbjct: 121 MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX 180

Query: 181 XXXXXXXXXXXKITARKDIELMEDLDNNGKPL 213
           XXXXXXXXXXXKITARKDIELMEDLDNNGKPL
Sbjct: 181 XXXXXXXXXXXKITARKDIELMEDLDNNGKPL 212

[Close]

BLAST of CsGy3G018370 vs. TrEMBL
Match: tr|A0A1S3C370|A0A1S3C370_CUCME (protein disulfide-isomerase SCO2 OS=Cucumis melo OX=3656 GN=LOC103496158 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.1e-96
Identity = 196/212 (92.45%), Postives = 200/212 (94.34%), Query Frame = 0


Query: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60
           MFAINPSS FFPSNPT  T RQHSISPPSSFRL  AATGDASP+PSISRLFNFPSLSATD
Sbjct: 1   MFAINPSSLFFPSNPT--TPRQHSISPPSSFRLYGAATGDASPEPSISRLFNFPSLSATD 60

Query: 61  ATGGFRLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120
           AT GFRLGQDYDAGASSP +D PGRF RGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP
Sbjct: 61  ATAGFRLGQDYDAGASSPAVDAPGRFGRGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120

Query: 121 MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX 180
           M YPDSSPVSPDEIDRRL+CDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX
Sbjct: 121 MAYPDSSPVSPDEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIXXX 180

Query: 181 XXXXXXXXXXXKITARKDIELMEDLDNNGKPL 213
           XXXXXXXXXXXKITARKDIELMEDLDN+GK L
Sbjct: 181 XXXXXXXXXXXKITARKDIELMEDLDNDGKLL 210

[Close]

BLAST of CsGy3G018370 vs. TrEMBL
Match: tr|B9RYI8|B9RYI8_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0813630 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.8e-54
Identity = 134/222 (60.36%), Postives = 158/222 (71.17%), Query Frame = 0


Query: 1   MFAINPSSFFFPSNPTTATARQHSISPPS--SFRLSLAATGDASPDPSISRLFNFPSLSA 60
           M  INP+S FFPS P+      H +S PS  +     A+ GD    P+  R + F   SA
Sbjct: 1   MLPINPNSLFFPSKPS------HLLSLPSITTSHRCFASAGDLRHIPTFPRWW-FHFTSA 60

Query: 61  TDATGGFRLGQDYDAGASSPVID-----GP---GRFARGNGTVKVNAMEKKWSRDRESYL 120
            D TG  R+GQ+ D   SSPV D     GP   G    G+ +++VNA EKKWSR+RESYL
Sbjct: 61  AD-TGSIRIGQESDGATSSPVADSSSSAGPQRRGLGGSGSSSIRVNAKEKKWSRNRESYL 120

Query: 121 VDDSDVLPLPMTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYY 180
           VD+ D LPLPMTYPDS PVSP+EID+RLRCDP+++DC+EVVYEWTGKCRSCQGSGYVSY+
Sbjct: 121 VDNEDALPLPMTYPDSKPVSPEEIDKRLRCDPEIQDCREVVYEWTGKCRSCQGSGYVSYF 180

Query: 181 NKRGREIXXXXXXXXXXXXXXKITARKDIELMEDLDNNGKPL 213
           NKRG+E    XXXXXXXXXX KITARKDI +MEDLD NGKPL
Sbjct: 181 NKRGKETICKXXXXXXXXXXQKITARKDIGVMEDLD-NGKPL 213

[Close]

BLAST of CsGy3G018370 vs. TrEMBL
Match: tr|A0A2I4DPR7|A0A2I4DPR7_9ROSI (protein disulfide-isomerase SCO2-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108982275 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.1e-54
Identity = 123/213 (57.75%), Postives = 137/213 (64.32%), Query Frame = 0


Query: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60
           MFA+ P+S FFP+ P+    R               ATGD    PS  R F+FPS   + 
Sbjct: 1   MFALYPTSLFFPAKPSALRCR---------------ATGDIPVGPSFPRWFHFPS---SA 60

Query: 61  ATGGFRLGQDYDAGASSPVIDGPGRF-ARGNGTVKVNAME-KKWSRDRESYLVDDSDVLP 120
              G R+G D DA A     DG  R  A GN +VKVNA E KKWSR  +SYL DDSD LP
Sbjct: 61  EISGVRIGHDVDAAAK----DGSSRSGAAGNNSVKVNAREKKKWSRWGDSYLDDDSDALP 120

Query: 121 LPMTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREIX 180
           LPMTYPDSSPV P+EIDRRLRCDPQV+DCKEVVYEWTGKCRSCQGSG+ SYYNKRG+EI 
Sbjct: 121 LPMTYPDSSPVPPEEIDRRLRCDPQVQDCKEVVYEWTGKCRSCQGSGFASYYNKRGKEII 180

Query: 181 XXXXXXXXXXXXXKITARKDIELMEDLDNNGKP 212
                        KITARKDIE+MEDLDN   P
Sbjct: 181 CKCLPCAGIGYVQKITARKDIEVMEDLDNGRPP 191

[Close]

BLAST of CsGy3G018370 vs. TrEMBL
Match: tr|A0A2C9VL52|A0A2C9VL52_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G082700 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.1e-54
Identity = 134/222 (60.36%), Postives = 156/222 (70.27%), Query Frame = 0


Query: 1   MFAINPSSFFFPSNPTTATARQHSISP-PSSFRLS--LAATGDASPDPSISRLFNFPSLS 60
           M  INP+S FFPSNP       + + P PSS   S    A GD    P+  R F+F   S
Sbjct: 1   MLPINPTSLFFPSNP-------YPLLPLPSSATTSHRCFAAGDFRLGPTFPRWFHF--TS 60

Query: 61  ATDATGGFRLGQDYDAGASSPVIDG-------PGRFARG-NGTVKVNAMEKKWSRDRESY 120
           AT   G  R+GQ+ D  AS+P  DG       PG    G +G+++VNA EKKWSR+RESY
Sbjct: 61  ATADAGSIRIGQESDGAASAPA-DGSSTAPLRPGVGGSGSSGSIRVNAREKKWSRNRESY 120

Query: 121 LVDDSDVLPLPMTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSY 180
           L D+ D LPLPMTYPDS PV P+EID+RLRCDP+++DCKEVVYEWTGKCRSCQGSGYVSY
Sbjct: 121 LADNEDALPLPMTYPDSKPVPPEEIDKRLRCDPEIQDCKEVVYEWTGKCRSCQGSGYVSY 180

Query: 181 YNKRGREIXXXXXXXXXXXXXXKITARKDIELMEDLDNNGKP 212
           YNKRG+E    XXXXXXXXX  KITARKDI++MEDLD NGKP
Sbjct: 181 YNKRGKETICKXXXXXXXXXVQKITARKDIDVMEDLD-NGKP 211

The following BLAST results are available for this feature:

BLAST of CsGy3G018370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140700.2	6.3e-107	99.53	PREDICTED: protein disulfide-isomerase SCO2 [Cucumis sativus] >KGN57535.1 hypoth...	[more]
XP_008456126.1	1.7e-96	92.45	PREDICTED: protein disulfide-isomerase SCO2 [Cucumis melo]	[more]
XP_022941608.1	4.8e-83	76.42	protein disulfide-isomerase SCO2 [Cucurbita moschata]	[more]
XP_023517721.1	5.4e-82	75.47	protein disulfide-isomerase SCO2 [Cucurbita pepo subsp. pepo]	[more]
XP_022982746.1	9.1e-82	77.36	protein disulfide-isomerase SCO2 [Cucurbita maxima]	[more]

BLAST of CsGy3G018370 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19220.1	7.3e-41	57.93	protein disulfide isomerases	[more]

BLAST of CsGy3G018370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q93YN0\|SCO2_ARATH	1.3e-39	57.93	Protein disulfide-isomerase SCO2 OS=Arabidopsis thaliana OX=3702 GN=SCO2 PE=1 SV...	[more]

BLAST of CsGy3G018370 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6G9\|A0A0A0L6G9_CUCSA	4.2e-107	99.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207360 PE=4 SV=1	[more]
tr\|A0A1S3C370\|A0A1S3C370_CUCME	1.1e-96	92.45	protein disulfide-isomerase SCO2 OS=Cucumis melo OX=3656 GN=LOC103496158 PE=4 SV...	[more]
tr\|B9RYI8\|B9RYI8_RICCO	1.8e-54	60.36	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0813630 PE=4 SV=1	[more]
tr\|A0A2I4DPR7\|A0A2I4DPR7_9ROSI	9.1e-54	57.75	protein disulfide-isomerase SCO2-like isoform X1 OS=Juglans regia OX=51240 GN=LO...	[more]
tr\|A0A2C9VL52\|A0A2C9VL52_MANES	9.1e-54	60.36	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G082700 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR037477	SCO2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016853	isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G018370.1	CsGy3G018370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037477	Protein disulfide-isomerase SCO2	PANTHER	PTHR36035	FAMILY NOT NAMED	coord: 4..207

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G018370	Cla013067	Watermelon (97103) v1	cgybwmB229
CsGy3G018370	Csa3G207360	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G018370	MELO3C019509	Melon (DHL92) v3.5.1	cgybmeB210
CsGy3G018370	ClCG05G010000	Watermelon (Charleston Gray)	cgybwcgB214
CsGy3G018370	CSPI03G18510	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G018370	Lsi05G002100	Bottle gourd (USVL1VR-Ls)	cgyblsiB198
CsGy3G018370	MELO3C019509.2	Melon (DHL92) v3.6.1	cgybmedB215
CsGy3G018370	CsaV3_3G018570	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G018370	Cla97C05G092410	Watermelon (97103) v2	cgybwmbB206
CsGy3G018370	Bhi01G001256	Wax gourd	cgybwgoB271

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G018370	Cucumber (Gy14) v2	cgybcgybB115
CsGy3G018370	Cucurbita maxima (Rimu)	cgybcmaB295
CsGy3G018370	Cucurbita maxima (Rimu)	cgybcmaB332
CsGy3G018370	Cucurbita maxima (Rimu)	cgybcmaB379
CsGy3G018370	Cucurbita maxima (Rimu)	cgybcmaB410
CsGy3G018370	Cucurbita moschata (Rifu)	cgybcmoB270
CsGy3G018370	Cucurbita moschata (Rifu)	cgybcmoB301
CsGy3G018370	Cucurbita moschata (Rifu)	cgybcmoB352
CsGy3G018370	Cucurbita moschata (Rifu)	cgybcmoB386
CsGy3G018370	Cucurbita pepo (Zucchini)	cgybcpeB317
CsGy3G018370	Cucurbita pepo (Zucchini)	cgybcpeB336
CsGy3G018370	Cucurbita pepo (Zucchini)	cgybcpeB362
CsGy3G018370	Cucumber (Chinese Long) v2	cgybcuB151
CsGy3G018370	Bottle gourd (USVL1VR-Ls)	cgyblsiB173
CsGy3G018370	Melon (DHL92) v3.5.1	cgybmeB160
CsGy3G018370	Melon (DHL92) v3.6.1	cgybmedB160
CsGy3G018370	Watermelon (Charleston Gray)	cgybwcgB197
CsGy3G018370	Watermelon (97103) v1	cgybwmB253
CsGy3G018370	Wild cucumber (PI 183967)	cgybcpiB153
CsGy3G018370	Silver-seed gourd	carcgybB0221
CsGy3G018370	Silver-seed gourd	carcgybB0380
CsGy3G018370	Silver-seed gourd	carcgybB0650
CsGy3G018370	Cucumber (Chinese Long) v3	cgybcucB156
CsGy3G018370	Watermelon (97103) v2	cgybwmbB190