CsGy3G018230 (gene) Cucumber (Gy14) v2

NameCsGy3G018230
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr3 : 14393370 .. 14394645 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAACAGAAAAACAATCACAAGAATCGTTCCATGAAAATCATGCTCCAGCTTTAAGTTTGCAACGTCTTGAAGAAAGAATGAACATTCATAACTTGGATGATACAGAGGTAAATATATTGTTTTTCTTTTGAACTGAGTTAAATTTATTATTGTTTAAGGTATATCAACATCATCGATATAACATAAAAGTTATATAAATATACTGATATACATCATAAAGAAATAAATTTGTTAATACTGATATATTGATATTATAGATTAATGAAGAAGAAATTAAACAAGAAAAGAATACAAAAGAGCTAGAGCAAGCAATCAAGAACATTGGTAAGTTCATCAACAATGTAACATACATTTAGATTACTTATAATAATTTCATTTTTCATAAATCATAAAAGAATCATGAAGATGGTGAAAAAAAAACGAGGAAGAAATAGAGACTCAAGAAGTGAATGCAGAAGATCAACCAATAAACGCAGAAAATAAAGATAAAAATGTAAGTAACTTGTAATATAGTTTCGTAGAATACTAAGGTATATCCTTTTATTGTTATGTTTGTTTTAATAAAATTTTCTACTTATTCTTTAAAGAATGAAAAAGACAATGAAGAAAAACAAATTAATAAAGTTTCAAAAGAAGCAGATGGACCAACTGTAAGTAATTTAGTACATCTACATTTTGATAATATCATCAGACTTATTCACCTATATTCATACTTTTATTTAAAGATTGGAGAATCTGAAGAACAACCAAATGAAAGAGAGTTACATTGAAAGAAGTTATTGGAAACAAGCCTCAAAGTAGTTGAAAACATCCTCAAAATTAAAGTGGTTATAACTAAACAATATGTTTCTAAGCTTAAGTTTACTAATTGATACACCTTATTATTCTATGTACATAAACTTGCTGATACATGTTGATTTATTGTTATGATATCGAATTTTGGGTGATAACACAGGAAAAACACTAACAAAATGAAGAAGGGAGGACAAAGAAAAAGAACGATAAAGACAAACAAGTGGTAAAATTATTTTTTAAGTATAATATTTTTAGAATTTTAATTTTATTTTGTAGAATACTAATAAATAAAATTGTATTTTTTAGGTTATTGAAAATAGAGTACTTACAAGGAAAACTTCACAACTTGCTGCCCATGATGAAAAGTGCAAAGTGCAATGTGAGCGGCCAAAAAGGAAACTGAAACCCACACCAAAAGCTATTGATTTGGAATTGGCCAAAAAGAATAAATCTCCAAAAAAGGCACAACAATCACAT

mRNA sequence

ATGCCAACAGAAAAACAATCACAAGAATCGTTCCATGAAAATCATGCTCCAGCTTTAAGTTTGCAACGTCTTGAAGAAAGAATGAACATTCATAACTTGGATGATACAGAGATTAATGAAGAAGAAATTAAACAAGAAAAGAATACAAAAGAGCTAGAGCAAGCAATCAAGAACATTGGTAAGTTCATCAACAATAATGAAAAAGACAATGAAGAAAAACAAATTAATAAAGTTTCAAAAGAAGCAGATGGACCAACTGTTATTGAAAATAGAGTACTTACAAGGAAAACTTCACAACTTGCTGCCCATGATGAAAAGTGCAAAGTGCAATGTGAGCGGCCAAAAAGGAAACTGAAACCCACACCAAAAGCTATTGATTTGGAATTGGCCAAAAAGAATAAATCTCCAAAAAAGGCACAACAATCACAT

Coding sequence (CDS)

ATGCCAACAGAAAAACAATCACAAGAATCGTTCCATGAAAATCATGCTCCAGCTTTAAGTTTGCAACGTCTTGAAGAAAGAATGAACATTCATAACTTGGATGATACAGAGATTAATGAAGAAGAAATTAAACAAGAAAAGAATACAAAAGAGCTAGAGCAAGCAATCAAGAACATTGGTAAGTTCATCAACAATAATGAAAAAGACAATGAAGAAAAACAAATTAATAAAGTTTCAAAAGAAGCAGATGGACCAACTGTTATTGAAAATAGAGTACTTACAAGGAAAACTTCACAACTTGCTGCCCATGATGAAAAGTGCAAAGTGCAATGTGAGCGGCCAAAAAGGAAACTGAAACCCACACCAAAAGCTATTGATTTGGAATTGGCCAAAAAGAATAAATCTCCAAAAAAGGCACAACAATCACAT

Protein sequence

MPTEKQSQESFHENHAPALSLQRLEERMNIHNLDDTEINEEEIKQEKNTKELEQAIKNIGKFINNNEKDNEEKQINKVSKEADGPTVIENRVLTRKTSQLAAHDEKCKVQCERPKRKLKPTPKAIDLELAKKNKSPKKAQQSH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G018230.1CsGy3G018230.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..143

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G018230Cucumber (Chinese Long) v3cgybcucB117
CsGy3G018230Cucumber (Chinese Long) v3cgybcucB156
CsGy3G018230Watermelon (97103) v2cgybwmbB190
CsGy3G018230Watermelon (97103) v2cgybwmbB206
CsGy3G018230Wax gourdcgybwgoB271
CsGy3G018230Wax gourdcgybwgoB298
CsGy3G018230Cucumber (Gy14) v2cgybcgybB115
CsGy3G018230Cucurbita maxima (Rimu)cgybcmaB295
CsGy3G018230Cucurbita maxima (Rimu)cgybcmaB332
CsGy3G018230Cucurbita maxima (Rimu)cgybcmaB379
CsGy3G018230Cucurbita maxima (Rimu)cgybcmaB410
CsGy3G018230Cucurbita moschata (Rifu)cgybcmoB270
CsGy3G018230Cucurbita moschata (Rifu)cgybcmoB301
CsGy3G018230Cucurbita moschata (Rifu)cgybcmoB352
CsGy3G018230Cucurbita moschata (Rifu)cgybcmoB386
CsGy3G018230Cucurbita pepo (Zucchini)cgybcpeB317
CsGy3G018230Cucurbita pepo (Zucchini)cgybcpeB336
CsGy3G018230Cucurbita pepo (Zucchini)cgybcpeB362
CsGy3G018230Cucumber (Chinese Long) v2cgybcuB109
CsGy3G018230Cucumber (Chinese Long) v2cgybcuB151
CsGy3G018230Bottle gourd (USVL1VR-Ls)cgyblsiB173
CsGy3G018230Bottle gourd (USVL1VR-Ls)cgyblsiB198
CsGy3G018230Melon (DHL92) v3.5.1cgybmeB160
CsGy3G018230Melon (DHL92) v3.5.1cgybmeB210
CsGy3G018230Melon (DHL92) v3.6.1cgybmedB160
CsGy3G018230Melon (DHL92) v3.6.1cgybmedB215
CsGy3G018230Watermelon (Charleston Gray)cgybwcgB197
CsGy3G018230Watermelon (Charleston Gray)cgybwcgB214
CsGy3G018230Watermelon (97103) v1cgybwmB229
CsGy3G018230Watermelon (97103) v1cgybwmB253
CsGy3G018230Wild cucumber (PI 183967)cgybcpiB110
CsGy3G018230Wild cucumber (PI 183967)cgybcpiB153
CsGy3G018230Silver-seed gourdcarcgybB0221
CsGy3G018230Silver-seed gourdcarcgybB0380