CsGy3G016620 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G016620
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Description3-ketoacyl-CoA synthase
LocationChr3 : 12361084 .. 12362861 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTTGCTCCCCAGCTCAGCCAAAGCCATGGTACCACTACCTTTTACTCCACTCAATTGTTAACACGCGTTTCCTGGGCTTTCTTCCAACCTCAAAACTTTTTCATTCTCATTCTCCTGATTCACATGGAATCTTCAATTTTCTTTCAAGGGGATGGAATCCCATTCTCTATATCTTCCTCCAACTGTCTTCTTATACCTTCTTCAACTACATCATTAAGCTTCACATTTTGAATGCTCCCCGACCTTGTTTATTTAGTTGACTTCTCACGCATCAAACCACCGCGTTCTGCAGAATTCTCAGGCATCAGGCATCAACAAATCATCAAACCACCATGTGCTCGAGGATCCTTCAGACGCAGCAGATCCTGATGCTCCCCGTCGACAGTATGTATATTTTGGGGACGGGGGATTATCCAGAGATGACCGTCAAGCTTATAACTTCGAAGAGATAAGAAGAGCCAAGGTTTTCCATAACAGATAGTTACCTCGATCTAGCTTAGTCTAGTAATTTGATTGAAGAGCTGATTCAGGGACGGTTGTTGAATTCGGCAACCTCAGGGGCAGCAGAATTTCCGGCAGTGTTGGCGTTTGATGCGGGAGAGGTGAATCAGCCCCATTTTATACAATGGATGCCCTAAATTGGAGAAGCAAAGAGGGGTTTTCTAATTTTGAAATACAGATAGCAGCAAGCTAGAGGATGAAGAAGGATTCTTCCTAACAAATTGATAACAGAAGTTCCTTCTATTCCTTCAGACGTGGCTTTTAACTCTGACATGGCAATGCTGATATGAGTGGGCAGCCTCTGTCTCTTTGGCTCCATCCTTCTTGGCATTTGTCCTAATACTCTTTTCCTTGAACATGCAACATTAATAGATGTTTTTGACAATGAGGAGCCTCAGTTTCGTGGCCAAAACTCCCAAATCTTCTGGACAGAGTGAACAAACATGCCTCCCTCCAGCTCTACATTTCCCAACACCCAAAACCCATCAGCAAGAATCCATTCATGAAGTCCATATGCTACTGTTTCCTGTCATGAATGATCTTTTAGCCAAAACCCATCTCTCTCCTTCCGACATTGTCATCACTCAACCACCAATATTCAATGAGAAGTGACATCAAAAGCTATGACCTTTCTGGAATGGGGTGTAGTTCAAGCCAAGTGCTCTTGCTTTTCATTTAGCTGAAAATCTTTCTTGAAGTTCATGAAAACTCAAATGCTATTGTACTTGGGTACAGACACTATATCAAATTTTGGTATGCAGGAAAAGAACACTCCAGACTAATTCTTAGTTACTACGTCCGTATGGGCAGCGTGGCTGTTTTATTCACCAACGTAAAACAGGCAAAAAAAATTTCAAAATATAAATTATTTAAAACACTTAGAACACAGACATCCTTCAACGTATATAATAGAAACCAAAATAACCAGTGTTGTATTGTTCAAAAGTTATTCGTGAGATTTCCCATTTTGAAACTGTTTTAATACGATTGTTGTTGAACTGGAAGGAAACAAGTCGAGGTGCGAATCATCTACAATGAATCTACACAAAACTAGCTGGTGACTAAAATGAAAAATACAGCTTCCACAAAAAAGATCGTGACGTTGTGGAACTTCTCGGTAAGGAGCTTTAGGTAAAGACACCAACCTTGGTCACTTGATTCATATATCTTCTGAATTAAGTTTCTTATTTGTATAATCAATTATGAACTACTATTTAAAATTCTGTTCCAAAATATAGATAACAGTGACGTTGTGTATATACTTATATTGA

mRNA sequence

ATGGAATTTGCTCCCCAGCTCAGCCAAAGCCATGGTACCACTACCTTTTACTCCACTCAATTGTTAACACGCTTGACTTCTCACGCATCAAACCACCGCGTTCTGCAGAATTCTCAGGCATCAGGCATCAACAAATCATCAAACCACCATGTGCTCGAGGATCCTTCAGACGCAGCAGATCCTGATGCTCCCCGTCGACAGTATGTATATTTTGGGGACGGGGGATTATCCAGAGATGACCGTCAAGCTTATAACTTCGAAGAGATAAGAAGAGCCAAGGGACGGTTGTTGAATTCGGCAACCTCAGGGGCAGCAGAATTTCCGGCAGTGTTGGCGTTTGATGCGGGAGAGCTGAAAATCTTTCTTGAAGTTCATGAAAACTCAAATGCTATTGTACTTGGGTACAGACACTATATCAAATTTTGGTATGCAGGAAAAGAACACTCCAGACTAATTCTTAGTTACTACGTCCGTATGGGCAGCGTGGCTGTTTTATTCACCAACGTAAAACAGGCAAAAAAAATTTCAAAATATAAATTATTTAAAACACTTAGAACACAGACATCCTTCAACATAACAGTGACGTTGTGTATATACTTATATTGA

Coding sequence (CDS)

ATGGAATTTGCTCCCCAGCTCAGCCAAAGCCATGGTACCACTACCTTTTACTCCACTCAATTGTTAACACGCTTGACTTCTCACGCATCAAACCACCGCGTTCTGCAGAATTCTCAGGCATCAGGCATCAACAAATCATCAAACCACCATGTGCTCGAGGATCCTTCAGACGCAGCAGATCCTGATGCTCCCCGTCGACAGTATGTATATTTTGGGGACGGGGGATTATCCAGAGATGACCGTCAAGCTTATAACTTCGAAGAGATAAGAAGAGCCAAGGGACGGTTGTTGAATTCGGCAACCTCAGGGGCAGCAGAATTTCCGGCAGTGTTGGCGTTTGATGCGGGAGAGCTGAAAATCTTTCTTGAAGTTCATGAAAACTCAAATGCTATTGTACTTGGGTACAGACACTATATCAAATTTTGGTATGCAGGAAAAGAACACTCCAGACTAATTCTTAGTTACTACGTCCGTATGGGCAGCGTGGCTGTTTTATTCACCAACGTAAAACAGGCAAAAAAAATTTCAAAATATAAATTATTTAAAACACTTAGAACACAGACATCCTTCAACATAACAGTGACGTTGTGTATATACTTATATTGA

Protein sequence

MEFAPQLSQSHGTTTFYSTQLLTRLTSHASNHRVLQNSQASGINKSSNHHVLEDPSDAADPDAPRRQYVYFGDGGLSRDDRQAYNFEEIRRAKGRLLNSATSGAAEFPAVLAFDAGELKIFLEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLFKTLRTQTSFNITVTLCIYLY
Homology
[Close]
BLAST of CsGy3G016620 vs. NCBI nr
Match: XP_008439130.1 (PREDICTED: 3-ketoacyl-CoA synthase 6-like [Cucumis melo])

HSP 1 Score: 94.0 bits (232), Expect = 6.3e-16
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L+VHENSNA+VL        WYAGKEHSRLIL+ Y RMG  A+L TN K+AK  SKYKLF
Sbjct: 234 LQVHENSNAVVLSTEILSNGWYAGKEHSRLILNCYFRMGGAAILLTNRKEAKLFSKYKLF 293

Query: 182 KTLRTQTSFN 192
           KTLRTQTS++
Sbjct: 294 KTLRTQTSYD 303

[Close]
BLAST of CsGy3G016620 vs. NCBI nr
Match: XP_004148151.1 (PREDICTED: 3-ketoacyl-CoA synthase 6-like [Cucumis sativus] >KGN57308.1 hypothetical protein Csa_3G178500 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 1.8e-15
Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L+VHENSN +VL        WYAGKEHSRLIL+ Y RMG  A+L TN K+AK  SKYKLF
Sbjct: 234 LQVHENSNVVVLSTEILSNGWYAGKEHSRLILNCYFRMGGAAILLTNRKEAKLFSKYKLF 293

Query: 182 KTLRTQTSFN 192
           KTLRTQTS++
Sbjct: 294 KTLRTQTSYD 303

[Close]
BLAST of CsGy3G016620 vs. NCBI nr
Match: XP_022945769.1 (3-ketoacyl-CoA synthase 7-like [Cucurbita moschata])

HSP 1 Score: 87.0 bits (214), Expect = 7.7e-14
Identity = 45/70 (64.29%), Postives = 52/70 (74.29%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L+VHENSNA+VL        WYAGKE SRLIL+ Y RMG  A+L TN K+AK  SKYKLF
Sbjct: 231 LQVHENSNAVVLSTEILSNGWYAGKEPSRLILNCYFRMGGAAILLTNRKEAKDYSKYKLF 290

Query: 182 KTLRTQTSFN 192
           K+LRT TSF+
Sbjct: 291 KSLRTLTSFD 300

[Close]
BLAST of CsGy3G016620 vs. NCBI nr
Match: XP_022968007.1 (3-ketoacyl-CoA synthase 7-like [Cucurbita maxima])

HSP 1 Score: 87.0 bits (214), Expect = 7.7e-14
Identity = 45/70 (64.29%), Postives = 52/70 (74.29%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L+VHENSNA+VL        WYAGKE SRLIL+ Y RMG  A+L TN K+AK  SKYKLF
Sbjct: 231 LQVHENSNAVVLSTEILSNGWYAGKEPSRLILNCYFRMGGAAILLTNRKEAKDYSKYKLF 290

Query: 182 KTLRTQTSFN 192
           K+LRT TSF+
Sbjct: 291 KSLRTLTSFD 300

[Close]
BLAST of CsGy3G016620 vs. NCBI nr
Match: XP_022968008.1 (3-ketoacyl-CoA synthase 7-like [Cucurbita maxima])

HSP 1 Score: 87.0 bits (214), Expect = 7.7e-14
Identity = 45/70 (64.29%), Postives = 52/70 (74.29%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L+VHENSNA+VL        WYAGKE SRLIL+ Y RMG  A+L TN K+AK  SKYKLF
Sbjct: 231 LQVHENSNAVVLSTEILSNGWYAGKEPSRLILNCYFRMGGAAILLTNRKEAKDYSKYKLF 290

Query: 182 KTLRTQTSFN 192
           K+LRT TSF+
Sbjct: 291 KSLRTLTSFD 300

[Close]
BLAST of CsGy3G016620 vs. TAIR10
Match: AT4G34510.1 (3-ketoacyl-CoA synthase 17)

HSP 1 Score: 49.7 bits (117), Expect = 2.5e-06
Identity = 32/109 (29.36%), Postives = 53/109 (48.62%), Query Frame = 0 

Query: 91  RAKGRLLNSATSGAAEFPAVLAFDAGELKIFLEVHENSNAIVLGYRHYIKFWYAGKEHSR 150
           + +G + +    G      V+A D       L++H N+ A+V+   +  + WY G + + 
Sbjct: 203 KLRGNIKSFNLGGMGCSAGVIAVDLA--SDMLQIHRNTFALVVSTENITQNWYFGNKKAM 262

Query: 151 LILSYYVRMGSVAVLFTNVKQAKKISKYKLFKTLRTQTSFNITVTLCIY 200
           LI +   R+G  AVL +N    +K SKYKL  T+RT    +     C+Y
Sbjct: 263 LIPNCLFRVGGSAVLLSNKPLDRKRSKYKLVHTVRTHKGSDENAFNCVY 309

[Close]
BLAST of CsGy3G016620 vs. TAIR10
Match: AT2G16280.1 (3-ketoacyl-CoA synthase 9)

HSP 1 Score: 48.9 bits (115), Expect = 4.2e-06
Identity = 31/109 (28.44%), Postives = 54/109 (49.54%), Query Frame = 0 

Query: 91  RAKGRLLNSATSGAAEFPAVLAFDAGELKIFLEVHENSNAIVLGYRHYIKFWYAGKEHSR 150
           + +G + +    G      V++ D    K  L+VH N+ A+V+   +  + WY G + + 
Sbjct: 229 KLRGNVKSFNLGGMGCSAGVISIDLA--KDMLQVHRNTYAVVVSTENITQNWYFGNKKAM 288

Query: 151 LILSYYVRMGSVAVLFTNVKQAKKISKYKLFKTLRTQTSFNITVTLCIY 200
           LI +   R+G  A+L +N  + ++ SKYKL  T+RT          C+Y
Sbjct: 289 LIPNCLFRVGGSAILLSNKGKDRRRSKYKLVHTVRTHKGAVEKAFNCVY 335

[Close]
BLAST of CsGy3G016620 vs. TAIR10
Match: AT1G01120.1 (3-ketoacyl-CoA synthase 1)

HSP 1 Score: 47.8 bits (112), Expect = 9.4e-06
Identity = 26/78 (33.33%), Postives = 41/78 (52.56%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L+ + NS A+V+   +    WY G + S L+ +   RMG  A+L +N +Q +K SKY L 
Sbjct: 272 LKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAILLSNRRQDRKKSKYSLV 331

Query: 182 KTLRTQTSFNITVTLCIY 200
             +RT    +     C+Y
Sbjct: 332 NVVRTHKGSDDKNYNCVY 349

[Close]
BLAST of CsGy3G016620 vs. TAIR10
Match: AT4G34520.1 (3-ketoacyl-CoA synthase 18)

HSP 1 Score: 47.8 bits (112), Expect = 9.4e-06
Identity = 29/89 (32.58%), Postives = 48/89 (53.93%), Query Frame = 0 

Query: 110 VLAFDAGELKIFLEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNV 169
           V+A D    K  L VH+N+ A+V+   +  +  YAG+  S ++ +   R+G  A+L +N 
Sbjct: 227 VIAIDLA--KDLLHVHKNTYALVVSTENITQGIYAGENRSMMVSNCLFRVGGAAILLSNK 286

Query: 170 KQAKKISKYKLFKTLRTQTSFNITVTLCI 199
              ++ SKYKL  T+RT T  +     C+
Sbjct: 287 SGDRRRSKYKLVHTVRTHTGADDKSFRCV 313

[Close]
BLAST of CsGy3G016620 vs. TAIR10
Match: AT2G26640.1 (3-ketoacyl-CoA synthase 11)

HSP 1 Score: 45.4 bits (106), Expect = 4.7e-05
Identity = 27/96 (28.12%), Postives = 49/96 (51.04%), Query Frame = 0 

Query: 91  RAKGRLLNSATSGAAEFPAVLAFDAGELKIFLEVHENSNAIVLGYRHYIKFWYAGKEHSR 150
           + +G +L+    G      +++ D    K  L    N+ A+V+   +    WY G + S+
Sbjct: 221 KLRGNILSYNLGGMGCSAGLISIDLA--KHLLHSIPNTYAMVISMENITLNWYFGNDRSK 280

Query: 151 LILSYYVRMGSVAVLFTNVKQAKKISKYKLFKTLRT 187
           L+ +   RMG  A+L +N +  ++ SKY+L  T+RT
Sbjct: 281 LVSNCLFRMGGAAILLSNKRWDRRRSKYELVDTVRT 314

[Close]
BLAST of CsGy3G016620 vs. Swiss-Prot
Match: sp|O65677|KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana OX=3702 GN=KCS17 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.5e-05
Identity = 32/109 (29.36%), Postives = 53/109 (48.62%), Query Frame = 0 

Query: 91  RAKGRLLNSATSGAAEFPAVLAFDAGELKIFLEVHENSNAIVLGYRHYIKFWYAGKEHSR 150
           + +G + +    G      V+A D       L++H N+ A+V+   +  + WY G + + 
Sbjct: 203 KLRGNIKSFNLGGMGCSAGVIAVDLA--SDMLQIHRNTFALVVSTENITQNWYFGNKKAM 262

Query: 151 LILSYYVRMGSVAVLFTNVKQAKKISKYKLFKTLRTQTSFNITVTLCIY 200
           LI +   R+G  AVL +N    +K SKYKL  T+RT    +     C+Y
Sbjct: 263 LIPNCLFRVGGSAVLLSNKPLDRKRSKYKLVHTVRTHKGSDENAFNCVY 309

[Close]
BLAST of CsGy3G016620 vs. Swiss-Prot
Match: sp|Q9SIX1|KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana OX=3702 GN=KCS9 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 7.6e-05
Identity = 31/109 (28.44%), Postives = 54/109 (49.54%), Query Frame = 0 

Query: 91  RAKGRLLNSATSGAAEFPAVLAFDAGELKIFLEVHENSNAIVLGYRHYIKFWYAGKEHSR 150
           + +G + +    G      V++ D    K  L+VH N+ A+V+   +  + WY G + + 
Sbjct: 229 KLRGNVKSFNLGGMGCSAGVISIDLA--KDMLQVHRNTYAVVVSTENITQNWYFGNKKAM 288

Query: 151 LILSYYVRMGSVAVLFTNVKQAKKISKYKLFKTLRTQTSFNITVTLCIY 200
           LI +   R+G  A+L +N  + ++ SKYKL  T+RT          C+Y
Sbjct: 289 LIPNCLFRVGGSAILLSNKGKDRRRSKYKLVHTVRTHKGAVEKAFNCVY 335

[Close]
BLAST of CsGy3G016620 vs. Swiss-Prot
Match: sp|Q38860|KCS18_ARATH (3-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana OX=3702 GN=FAE1 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-04
Identity = 29/89 (32.58%), Postives = 48/89 (53.93%), Query Frame = 0 

Query: 110 VLAFDAGELKIFLEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNV 169
           V+A D    K  L VH+N+ A+V+   +  +  YAG+  S ++ +   R+G  A+L +N 
Sbjct: 227 VIAIDLA--KDLLHVHKNTYALVVSTENITQGIYAGENRSMMVSNCLFRVGGAAILLSNK 286

Query: 170 KQAKKISKYKLFKTLRTQTSFNITVTLCI 199
              ++ SKYKL  T+RT T  +     C+
Sbjct: 287 SGDRRRSKYKLVHTVRTHTGADDKSFRCV 313

[Close]
BLAST of CsGy3G016620 vs. Swiss-Prot
Match: sp|Q9MAM3|KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana OX=3702 GN=KCS1 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-04
Identity = 26/78 (33.33%), Postives = 41/78 (52.56%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L+ + NS A+V+   +    WY G + S L+ +   RMG  A+L +N +Q +K SKY L 
Sbjct: 272 LKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAILLSNRRQDRKKSKYSLV 331

Query: 182 KTLRTQTSFNITVTLCIY 200
             +RT    +     C+Y
Sbjct: 332 NVVRTHKGSDDKNYNCVY 349

[Close]
BLAST of CsGy3G016620 vs. Swiss-Prot
Match: sp|O48780|KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana OX=3702 GN=KCS11 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 8.4e-04
Identity = 27/96 (28.12%), Postives = 49/96 (51.04%), Query Frame = 0 

Query: 91  RAKGRLLNSATSGAAEFPAVLAFDAGELKIFLEVHENSNAIVLGYRHYIKFWYAGKEHSR 150
           + +G +L+    G      +++ D    K  L    N+ A+V+   +    WY G + S+
Sbjct: 221 KLRGNILSYNLGGMGCSAGLISIDLA--KHLLHSIPNTYAMVISMENITLNWYFGNDRSK 280

Query: 151 LILSYYVRMGSVAVLFTNVKQAKKISKYKLFKTLRT 187
           L+ +   RMG  A+L +N +  ++ SKY+L  T+RT
Sbjct: 281 LVSNCLFRMGGAAILLSNKRWDRRRSKYELVDTVRT 314

[Close]
BLAST of CsGy3G016620 vs. TrEMBL
Match: tr|A0A1S3AY28|A0A1S3AY28_CUCME (3-ketoacyl-CoA synthase OS=Cucumis melo OX=3656 GN=LOC103484019 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.2e-16
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L+VHENSNA+VL        WYAGKEHSRLIL+ Y RMG  A+L TN K+AK  SKYKLF
Sbjct: 234 LQVHENSNAVVLSTEILSNGWYAGKEHSRLILNCYFRMGGAAILLTNRKEAKLFSKYKLF 293

Query: 182 KTLRTQTSFN 192
           KTLRTQTS++
Sbjct: 294 KTLRTQTSYD 303

[Close]
BLAST of CsGy3G016620 vs. TrEMBL
Match: tr|A0A0A0L6A4|A0A0A0L6A4_CUCSA (3-ketoacyl-CoA synthase OS=Cucumis sativus OX=3659 GN=Csa_3G178500 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-15
Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L+VHENSN +VL        WYAGKEHSRLIL+ Y RMG  A+L TN K+AK  SKYKLF
Sbjct: 234 LQVHENSNVVVLSTEILSNGWYAGKEHSRLILNCYFRMGGAAILLTNRKEAKLFSKYKLF 293

Query: 182 KTLRTQTSFN 192
           KTLRTQTS++
Sbjct: 294 KTLRTQTSYD 303

[Close]
BLAST of CsGy3G016620 vs. TrEMBL
Match: tr|A0A0A0L8H3|A0A0A0L8H3_CUCSA (3-ketoacyl-CoA synthase OS=Cucumis sativus OX=3659 GN=Csa_3G178510 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.1e-12
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L VH+NSNA+VL        WYAGKE S+LIL+   RMGS A+L +N KQAK+ SKYKL 
Sbjct: 217 LRVHKNSNAVVLSTEILSNGWYAGKERSKLILNCLFRMGSAAILLSNKKQAKESSKYKLI 276

Query: 182 KTLRTQTSFN 192
           KTLRTQ +F+
Sbjct: 277 KTLRTQRAFD 286

[Close]
BLAST of CsGy3G016620 vs. TrEMBL
Match: tr|A0A1S3AY99|A0A1S3AY99_CUCME (3-ketoacyl-CoA synthase OS=Cucumis melo OX=3656 GN=LOC103484209 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 6.3e-12
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L+VH+NSNA+VL        WYAGKE S+LIL+   RMGS A+L +N  QAK+ SKYKL 
Sbjct: 217 LQVHKNSNAVVLSTEILSNGWYAGKERSKLILNCLFRMGSAAILLSNKTQAKESSKYKLI 276

Query: 182 KTLRTQTSFN 192
           KTLRTQ +F+
Sbjct: 277 KTLRTQRAFD 286

[Close]
BLAST of CsGy3G016620 vs. TrEMBL
Match: tr|W9S1C8|W9S1C8_9ROSA (3-ketoacyl-CoA synthase 5 OS=Morus notabilis OX=981085 GN=L484_012948 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.5e-10
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 0 

Query: 122 LEVHENSNAIVLGYRHYIKFWYAGKEHSRLILSYYVRMGSVAVLFTNVKQAKKISKYKLF 181
           L++HENSNAIVL        WY+G E   L+L+   RMGS A+L TN K+AK +SKY+L 
Sbjct: 115 LKIHENSNAIVLSTEILSPGWYSGNEKPMLLLNCLFRMGSAAILLTNKKEAKTVSKYELI 174

Query: 182 KTLRTQTSF 191
           KTLRTQ +F
Sbjct: 175 KTLRTQRAF 183

The following BLAST results are available for this feature:
BLAST of CsGy3G016620 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008439130.16.3e-1667.14PREDICTED: 3-ketoacyl-CoA synthase 6-like [Cucumis melo][more]
XP_004148151.11.8e-1565.71PREDICTED: 3-ketoacyl-CoA synthase 6-like [Cucumis sativus] >KGN57308.1 hypothet... [more]
XP_022945769.17.7e-1464.293-ketoacyl-CoA synthase 7-like [Cucurbita moschata][more]
XP_022968007.17.7e-1464.293-ketoacyl-CoA synthase 7-like [Cucurbita maxima][more]
XP_022968008.17.7e-1464.293-ketoacyl-CoA synthase 7-like [Cucurbita maxima][more]
BLAST of CsGy3G016620 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G34510.12.5e-0629.363-ketoacyl-CoA synthase 17[more]
AT2G16280.14.2e-0628.443-ketoacyl-CoA synthase 9[more]
AT1G01120.19.4e-0633.333-ketoacyl-CoA synthase 1[more]
AT4G34520.19.4e-0632.583-ketoacyl-CoA synthase 18[more]
AT2G26640.14.7e-0528.133-ketoacyl-CoA synthase 11[more]
BLAST of CsGy3G016620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O65677|KCS17_ARATH4.5e-0529.363-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana OX=3702 GN=KCS17 PE=1 SV=1[more]
sp|Q9SIX1|KCS9_ARATH7.6e-0528.443-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana OX=3702 GN=KCS9 PE=2 SV=1[more]
sp|Q38860|KCS18_ARATH1.7e-0432.583-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana OX=3702 GN=FAE1 PE=1 SV=1[more]
sp|Q9MAM3|KCS1_ARATH1.7e-0433.333-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana OX=3702 GN=KCS1 PE=1 SV=1[more]
sp|O48780|KCS11_ARATH8.4e-0428.133-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana OX=3702 GN=KCS11 PE=1 SV=1[more]
BLAST of CsGy3G016620 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AY28|A0A1S3AY28_CUCME4.2e-1667.143-ketoacyl-CoA synthase OS=Cucumis melo OX=3656 GN=LOC103484019 PE=3 SV=1[more]
tr|A0A0A0L6A4|A0A0A0L6A4_CUCSA1.2e-1565.713-ketoacyl-CoA synthase OS=Cucumis sativus OX=3659 GN=Csa_3G178500 PE=3 SV=1[more]
tr|A0A0A0L8H3|A0A0A0L8H3_CUCSA2.1e-1260.003-ketoacyl-CoA synthase OS=Cucumis sativus OX=3659 GN=Csa_3G178510 PE=3 SV=1[more]
tr|A0A1S3AY99|A0A1S3AY99_CUCME6.3e-1258.573-ketoacyl-CoA synthase OS=Cucumis melo OX=3656 GN=LOC103484209 PE=3 SV=1[more]
tr|W9S1C8|W9S1C8_9ROSA1.5e-1055.073-ketoacyl-CoA synthase 5 OS=Morus notabilis OX=981085 GN=L484_012948 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
Vocabulary: INTERPRO
TermDefinition
IPR0123923-ktacl-CoA_syn
IPR013601FAE1_typ3_polyketide_synth
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G016620.1CsGy3G016620.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013601FAE1/Type III polyketide synthase-like proteinPFAMPF08392FAE1_CUT1_RppAcoord: 119..190
e-value: 3.5E-12
score: 46.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..65
NoneNo IPR availablePANTHERPTHR31561:SF27SUBFAMILY NOT NAMEDcoord: 121..191
IPR012392Very-long-chain 3-ketoacyl-CoA synthasePANTHERPTHR31561FAMILY NOT NAMEDcoord: 121..191

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G016620Cucumber (Gy14) v2cgybcgybB087
CsGy3G016620Cucumber (Gy14) v2cgybcgybB091
CsGy3G016620Cucurbita maxima (Rimu)cgybcmaB325
CsGy3G016620Cucurbita maxima (Rimu)cgybcmaB342
CsGy3G016620Cucurbita maxima (Rimu)cgybcmaB352
CsGy3G016620Cucurbita maxima (Rimu)cgybcmaB394
CsGy3G016620Cucurbita maxima (Rimu)cgybcmaB399
CsGy3G016620Cucurbita maxima (Rimu)cgybcmaB463
CsGy3G016620Cucurbita moschata (Rifu)cgybcmoB296
CsGy3G016620Cucurbita moschata (Rifu)cgybcmoB312
CsGy3G016620Cucurbita moschata (Rifu)cgybcmoB324
CsGy3G016620Cucurbita moschata (Rifu)cgybcmoB365
CsGy3G016620Cucurbita moschata (Rifu)cgybcmoB371
CsGy3G016620Cucurbita moschata (Rifu)cgybcmoB432
CsGy3G016620Cucurbita pepo (Zucchini)cgybcpeB287
CsGy3G016620Cucurbita pepo (Zucchini)cgybcpeB314
CsGy3G016620Cucurbita pepo (Zucchini)cgybcpeB327
CsGy3G016620Cucurbita pepo (Zucchini)cgybcpeB427
CsGy3G016620Cucumber (Chinese Long) v2cgybcuB127
CsGy3G016620Cucumber (Chinese Long) v2cgybcuB109
CsGy3G016620Cucumber (Chinese Long) v2cgybcuB128
CsGy3G016620Bottle gourd (USVL1VR-Ls)cgyblsiB141
CsGy3G016620Bottle gourd (USVL1VR-Ls)cgyblsiB197
CsGy3G016620Melon (DHL92) v3.5.1cgybmeB141
CsGy3G016620Melon (DHL92) v3.5.1cgybmeB200
CsGy3G016620Melon (DHL92) v3.6.1cgybmedB137
CsGy3G016620Melon (DHL92) v3.6.1cgybmedB201
CsGy3G016620Watermelon (Charleston Gray)cgybwcgB191
CsGy3G016620Watermelon (Charleston Gray)cgybwcgB203
CsGy3G016620Watermelon (97103) v1cgybwmB217
CsGy3G016620Watermelon (97103) v1cgybwmB246
CsGy3G016620Wild cucumber (PI 183967)cgybcpiB110
CsGy3G016620Wild cucumber (PI 183967)cgybcpiB129
CsGy3G016620Wild cucumber (PI 183967)cgybcpiB130
CsGy3G016620Silver-seed gourdcarcgybB0006
CsGy3G016620Silver-seed gourdcarcgybB0707
CsGy3G016620Silver-seed gourdcarcgybB0859
CsGy3G016620Silver-seed gourdcarcgybB0906
CsGy3G016620Silver-seed gourdcarcgybB0926
CsGy3G016620Cucumber (Chinese Long) v3cgybcucB117
CsGy3G016620Cucumber (Chinese Long) v3cgybcucB135
CsGy3G016620Watermelon (97103) v2cgybwmbB172
CsGy3G016620Watermelon (97103) v2cgybwmbB196
CsGy3G016620Watermelon (97103) v2cgybwmbB216
CsGy3G016620Wax gourdcgybwgoB274