CsGy3G016370 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G016370
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Embryo-specific family protein
Location	Chr3 : 12129965 .. 12131971 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCATATGTCTATAAGTATTTAGAAGAAGGAAAGAAATTAAACCAATTTAGGTATATAAATGTTATTCTTTTACAAGCAATCTAAGAACATATATTGTAAATTAGGCATCAAACTTTTGTTGGTTGACACAAAATAAACACATAAATAAGTTATAAGCTATGCTCATAAGTCATTCAAAATTTAAAGATATGAAGCTATAAAATTTAATAATTAAAACCGAGAACGGATGTGGAAATTTGTGTACCGTTCAAGGGTTCAATTAAATCTGATGGCTCTTTGTAGGATGAATCAGACTCCGTAGTTTTTCGTACTCTTCTTCTTCTCCAAAGGCTCCACCACGCAGCAAGAAAAATGGACATTAAAGGGGTGCTCTGTCTTCTCCTTACCTCCGCCATTCTTTTCCCTTTCTTAGAAGCCACCGAATTGCTACCCAAACCCGCTGAATCCTTTAATTTAACCTATATTCAGGTATCTCCGTTTTGTATCGCTGATTTCCATTTCCATTTCCATTTTTGCCGATTTTTAATCTGTTGTGTACCTTGGATGTATCTGACAACGATTTAATTTTGTGATTTTGTTTGCAACTTTCTGATGTTGAAGCAACTTGGGAGTTGTTCTTATTCGGTTGTTATATCCACGAGTTGTTTGTCGCCTGCATACACAAGGGATCAGATCAGTCTTTCATTCGGCGATGCTTATGGAAACCAGGTTTTCTTTGTTTAAACCTTCATTTTCCCCACTGATTGTATCGGAATAGAATGGCCTTGGTTTCTCGATCTTCCGCGATTTAATCTAATTTTAGATATTTGATATGGTTGGTGAATATAATCGGAGTTCAATTTTGCATTTGATTAGGGATACAAACGCTTATGAACATCTCTTTAGGTTATGGTGATAGATTGGTGTTATACTTCATCTTTTCGAGACAAAATGAAATAGAAATCTAATCGGGTTTCTATTTCTCGAATCAGGATTATGATGGGATGATAGTCTGTTGATTTATATGTTCTTCAAATCAGTTATGCATTTATTGATAAAACATTACTTTGGAAATCATTCATAGTAATTAACCAGTTTGAGTAATATCTTATACTCATTAACGTCTAGAACTTCCAAAACATCAGCAGATCACAGTGTTGATACAAGAATTTGAAAGGACACCGTATGATAATTCAAAAACAATCTAAGTTATGTCTTTTACTTTCAGATAAATTTGGGAACAATTAAACATGTTACAATTAATCATTGAAGAAGTTTGTTTTGTATAAAGAGTGATGAGTCTTAACTTGTGTATCAGATTTATGTGCCAAGGCTTGATGATCCATCTAGAAGGATATTTGAAAGATGTTCTTCTGATACATTTGGCATTAATGGACCTTGTGCTTACCAAATTTGCTATGTTTATCTTTATCGCACCGGACCGGATGCCTGGATCCCAACAACAGTGAGAATCTCTGGTGATAATTCTAGACCCGTCACGTTTAACTACAACACTGCCATACCGGGTGATGTATGGTTCGGTTTTAACTTGTGTGGTCATCCTTCGTCTTCAAACCGTATTTCAAGTTGCATAGGGTGGTTCTATGTCATTTTAGTGTCTATTATTCTACTTCTCTTGTAACTTTGTGTGATGTGAGGATGTTTGTTCATGTTCCATCCGTTGATAAGAATATACTTTACATGTAGCACTTTTAGCATAGGGGAGTTGTGCAGAGTTAATACAACAGGCTGAGGGAGTTGTTGGTGATCGAGACTCTTGACTTGGGATAAGATTTTGAATATCTTATTTTGGAATTGGGGAATAGAGAAATTTCAGGTTTTGTTTATTTCTTGATATGTAAAATGAGAAGAGATCCGATTTTTTTTTTTGTTTATTTCTTTGATTCAAGTGGGATTCTTCTCTTAACGCTTTATCCTATAAAAACTTTGTTATACCTCAGCCATGTGAAGGCCATGCCCTCAAACACTATTATGTTAGAGGTTGGTTTTTTTTTTTTTTTTTTTT

mRNA sequence

GTTCATATGTCTATAAGTATTTAGAAGAAGGAAAGAAATTAAACCAATTTAGGTATATAAATGTTATTCTTTTACAAGCAATCTAAGAACATATATTGTAAATTAGGCATCAAACTTTTGTTGGTTGACACAAAATAAACACATAAATAAGTTATAAGCTATGCTCATAAGTCATTCAAAATTTAAAGATATGAAGCTATAAAATTTAATAATTAAAACCGAGAACGGATGTGGAAATTTGTGTACCGTTCAAGGGTTCAATTAAATCTGATGGCTCTTTGTAGGATGAATCAGACTCCGTAGTTTTTCGTACTCTTCTTCTTCTCCAAAGGCTCCACCACGCAGCAAGAAAAATGGACATTAAAGGGGTGCTCTGTCTTCTCCTTACCTCCGCCATTCTTTTCCCTTTCTTAGAAGCCACCGAATTGCTACCCAAACCCGCTGAATCCTTTAATTTAACCTATATTCAGCAACTTGGGAGTTGTTCTTATTCGGTTGTTATATCCACGAGTTGTTTGTCGCCTGCATACACAAGGGATCAGATCAGTCTTTCATTCGGCGATGCTTATGGAAACCAGATTTATGTGCCAAGGCTTGATGATCCATCTAGAAGGATATTTGAAAGATGTTCTTCTGATACATTTGGCATTAATGGACCTTGTGCTTACCAAATTTGCTATGTTTATCTTTATCGCACCGGACCGGATGCCTGGATCCCAACAACAGTGAGAATCTCTGGTGATAATTCTAGACCCGTCACGTTTAACTACAACACTGCCATACCGGGTGATGTATGGTTCGGTTTTAACTTGTGTGGTCATCCTTCGTCTTCAAACCGTATTTCAAGTTGCATAGGGTGGTTCTATGTCATTTTAGTGTCTATTATTCTACTTCTCTTGTAACTTTGTGTGATGTGAGGATGTTTGTTCATGTTCCATCCGTTGATAAGAATATACTTTACATGTAGCACTTTTAGCATAGGGGAGTTGTGCAGAGTTAATACAACAGGCTGAGGGAGTTGTTGGTGATCGAGACTCTTGACTTGGGATAAGATTTTGAATATCTTATTTTGGAATTGGGGAATAGAGAAATTTCAGGTTTTGTTTATTTCTTGATATGTAAAATGAGAAGAGATCCGATTTTTTTTTTTGTTTATTTCTTTGATTCAAGTGGGATTCTTCTCTTAACGCTTTATCCTATAAAAACTTTGTTATACCTCAGCCATGTGAAGGCCATGCCCTCAAACACTATTATGTTAGAGGTTGGTTTTTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGACATTAAAGGGGTGCTCTGTCTTCTCCTTACCTCCGCCATTCTTTTCCCTTTCTTAGAAGCCACCGAATTGCTACCCAAACCCGCTGAATCCTTTAATTTAACCTATATTCAGCAACTTGGGAGTTGTTCTTATTCGGTTGTTATATCCACGAGTTGTTTGTCGCCTGCATACACAAGGGATCAGATCAGTCTTTCATTCGGCGATGCTTATGGAAACCAGATTTATGTGCCAAGGCTTGATGATCCATCTAGAAGGATATTTGAAAGATGTTCTTCTGATACATTTGGCATTAATGGACCTTGTGCTTACCAAATTTGCTATGTTTATCTTTATCGCACCGGACCGGATGCCTGGATCCCAACAACAGTGAGAATCTCTGGTGATAATTCTAGACCCGTCACGTTTAACTACAACACTGCCATACCGGGTGATGTATGGTTCGGTTTTAACTTGTGTGGTCATCCTTCGTCTTCAAACCGTATTTCAAGTTGCATAGGGTGGTTCTATGTCATTTTAGTGTCTATTATTCTACTTCTCTTGTAA

Protein sequence

MDIKGVLCLLLTSAILFPFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYTRDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIPTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVILVSIILLLL

Homology

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BLAST of CsGy3G016370 vs. NCBI nr
Match: XP_004148122.1 (PREDICTED: uncharacterized protein LOC101207117 [Cucumis sativus] >KGN57305.1 hypothetical protein Csa_3G177980 [Cucumis sativus])

HSP 1 Score: 373.6 bits (958), Expect = 3.7e-100
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MDIKGVLCLLLTSAILFPFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYT 60
           MDIKGVLCLLLTSAILF FLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYT
Sbjct: 1   MDIKGVLCLLLTSAILFSFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYT 60

Query: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW 120
           RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW
Sbjct: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW 120

Query: 121 IPTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVILVSIILL 180
           IPTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVI+VSIILL
Sbjct: 121 IPTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVIIVSIILL 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 182

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BLAST of CsGy3G016370 vs. NCBI nr
Match: XP_008439126.1 (PREDICTED: uncharacterized protein LOC103484016 [Cucumis melo])

HSP 1 Score: 356.3 bits (913), Expect = 6.2e-95
Identity = 173/182 (95.05%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDIKGVLCLLLTSAILFPFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYT 60
           MDIKGVLCLLLTSAILFP LEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSP YT
Sbjct: 1   MDIKGVLCLLLTSAILFPSLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPTYT 60

Query: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW 120
           RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW
Sbjct: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW 120

Query: 121 IPTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVILVSIILL 180
           IPTTV ISG NSRPVTFNYNTAIP DVWFGFNLCGHPSSSN IS CIG FYVILVSI+LL
Sbjct: 121 IPTTVTISGHNSRPVTFNYNTAIPSDVWFGFNLCGHPSSSNHISGCIGCFYVILVSILLL 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 182

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BLAST of CsGy3G016370 vs. NCBI nr
Match: XP_022923164.1 (embryo-specific protein ATS3B-like [Cucurbita moschata])

HSP 1 Score: 319.3 bits (817), Expect = 8.4e-84
Identity = 153/180 (85.00%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 3   IKGVLCLLLTSAILFPFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYTRD 62
           +K VLC LLTSA+L   LEATELLP+ AESFNLTYIQQLGSCSYSVVISTSC SP YTRD
Sbjct: 1   MKRVLCFLLTSALLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRD 60

Query: 63  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIP 122
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCSSDTF ++GPCAYQICYVYLYRTGPDAWIP
Sbjct: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQICYVYLYRTGPDAWIP 120

Query: 123 TTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVILVSIILLLL 182
           TTV+ISG NSRPVTFNYNTAIP DVWFGFNLCGH SSSNRISSCI + YV  VSI+LL L
Sbjct: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLYVSFVSILLLFL 180

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BLAST of CsGy3G016370 vs. NCBI nr
Match: XP_022984446.1 (embryo-specific protein ATS3B-like [Cucurbita maxima])

HSP 1 Score: 316.2 bits (809), Expect = 7.1e-83
Identity = 151/180 (83.89%), Postives = 162/180 (90.00%), Query Frame = 0


Query: 3   IKGVLCLLLTSAILFPFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYTRD 62
           +K VLC LLTSA L   LEATELLP+ AESFNLTYIQQLGSCSYSVVISTSC SP YTRD
Sbjct: 1   MKRVLCFLLTSAFLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRD 60

Query: 63  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIP 122
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCSSDTF ++GPCAYQ+CYVYLYR+GPDAWIP
Sbjct: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIP 120

Query: 123 TTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVILVSIILLLL 182
           TTV+ISG NSRPVTFNYNTAIP DVWFGFNLCGH SSSNRISSCI + YV  VSI+LL L
Sbjct: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLYVSFVSILLLFL 180

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BLAST of CsGy3G016370 vs. NCBI nr
Match: XP_023552620.1 (embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 2.1e-82
Identity = 151/180 (83.89%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 3   IKGVLCLLLTSAILFPFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYTRD 62
           +K VLC LLTSA L   LEATELLP+ AESFNLTYIQQL SCSYSVVISTSC SP YTRD
Sbjct: 1   MKRVLCFLLTSAFLLALLEATELLPESAESFNLTYIQQLASCSYSVVISTSCSSPTYTRD 60

Query: 63  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIP 122
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCSSDTF ++GPCAYQICYVYLYR+GPDAWIP
Sbjct: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQICYVYLYRSGPDAWIP 120

Query: 123 TTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVILVSIILLLL 182
           TTV+ISG NSRPVTFNYNTAIP DVWFGFNLCGH SSSNRISSCI + YV  VSI+LL L
Sbjct: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHSSSSNRISSCIWFLYVSFVSILLLFL 180

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BLAST of CsGy3G016370 vs. TAIR10
Match: AT5G62200.1 (Embryo-specific protein 3, (ATS3))

HSP 1 Score: 202.6 bits (514), Expect = 2.1e-52
Identity = 98/178 (55.06%), Postives = 125/178 (70.22%), Query Frame = 0


Query: 10  LLTSAILFPFLEATELL-------PKPAESFNLTYIQQLG-SCSYSVVISTSCLSPAYTR 69
           L  + I F F+ +T +        P  AESFN++ IQ+LG +C+Y+V+ISTSC S  YTR
Sbjct: 6   LFFTLISFVFIISTSVYESKVLDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTR 65

Query: 70  DQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWI 129
           DQIS++FGD YGNQIY PRLDDPS + FE+CSSDTF INGPC YQICYVYLYR+GPD WI
Sbjct: 66  DQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWI 125

Query: 130 PTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVILVSIIL 180
           P TV+I    S+ VTF YNT +P  VW+GFN C   S SN ++  +    +IL+  ++
Sbjct: 126 PNTVKIYSHGSKAVTFPYNTYVPESVWYGFNYCNSASDSNVLAIGLRRSVIILLGFVV 183

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BLAST of CsGy3G016370 vs. TAIR10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3))

HSP 1 Score: 168.3 bits (425), Expect = 4.3e-42
Identity = 76/143 (53.15%), Postives = 99/143 (69.23%), Query Frame = 0


Query: 27  PKPAESF-NLTYIQQLGSCSYSVVISTSCLSPAYTRDQISLSFGDAYGNQIYVPRLDDPS 86
           P P +SF     ++   +CSY+V+I TSC S +YTRD+IS+SFGD YGN++YV RLDDPS
Sbjct: 30  PLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDPS 89

Query: 87  RRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIPTTVRISGDNSRPVTFNYNTAIPG 146
            R FE+CSSDT+ I+GPC   +CY+YL R G D W P  V+I G + R VTF YN  +P 
Sbjct: 90  SRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPN 149

Query: 147 DVWFGFNLC---GHPSSSNRISS 166
            VW+GFN+C   G+  SS  IS+
Sbjct: 150 SVWYGFNVCNGIGNTKSSQPIST 172

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BLAST of CsGy3G016370 vs. TAIR10
Match: AT5G62210.1 (Embryo-specific protein 3, (ATS3))

HSP 1 Score: 131.0 bits (328), Expect = 7.7e-31
Identity = 55/116 (47.41%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 43  SCSYSVVISTSCLSPAYTRDQISLSFGDAYGNQIYVPRLDDP--SRRIFERCSSDTFGIN 102
           SC Y+V+++TSC SP ++RDQ++++ GDA  NQ+  PRLD P      FE+CSSDTF + 
Sbjct: 39  SCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVK 98

Query: 103 GPCAYQICYVYLYRTGPDAWIPTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGH 157
           G C   IC VY+YR+G D WIP TV I  + S+ V F++N  +P ++W+G N C +
Sbjct: 99  GKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCNN 154

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BLAST of CsGy3G016370 vs. TAIR10
Match: AT5G07190.1 (seed gene 3)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-27
Identity = 65/158 (41.14%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 10  LLTSAILFPFLEATELLPKPAESFNLTYIQ-QLGSCSYSVVISTSCLSPAYTRDQISLSF 69
           L  S + F F+  T        +F+L+ IQ Q G+C Y+VV+ TSCLSP  TRDQIS+ F
Sbjct: 6   LSVSFLFFAFIFVT-------HAFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVF 65

Query: 70  GDAYGNQIYVPRLDDPSRRI--FERCSSDTFGINGPCAYQ-ICYVYLYRTGPDAWIPTTV 129
           GDA GN++Y P+L    R      +CS++TF + G C    IC +Y+ R GPD W+P ++
Sbjct: 66  GDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESI 125

Query: 130 RISGDNSRPVTFNYNTAIPG-DVWFGFNLC---GHPSS 160
            I  + S+ V F+++ ++P  + W+G N C   G PSS
Sbjct: 126 EIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTTGRPSS 156

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BLAST of CsGy3G016370 vs. Swiss-Prot
Match: sp|Q6NPM5|ATS3B_ARATH (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-51
Identity = 98/178 (55.06%), Postives = 125/178 (70.22%), Query Frame = 0


Query: 10  LLTSAILFPFLEATELL-------PKPAESFNLTYIQQLG-SCSYSVVISTSCLSPAYTR 69
           L  + I F F+ +T +        P  AESFN++ IQ+LG +C+Y+V+ISTSC S  YTR
Sbjct: 6   LFFTLISFVFIISTSVYESKVLDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTR 65

Query: 70  DQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWI 129
           DQIS++FGD YGNQIY PRLDDPS + FE+CSSDTF INGPC YQICYVYLYR+GPD WI
Sbjct: 66  DQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWI 125

Query: 130 PTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVILVSIIL 180
           P TV+I    S+ VTF YNT +P  VW+GFN C   S SN ++  +    +IL+  ++
Sbjct: 126 PNTVKIYSHGSKAVTFPYNTYVPESVWYGFNYCNSASDSNVLAIGLRRSVIILLGFVV 183

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BLAST of CsGy3G016370 vs. Swiss-Prot
Match: sp|Q681K2|ATS3A_ARATH (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 7.8e-41
Identity = 76/143 (53.15%), Postives = 99/143 (69.23%), Query Frame = 0


Query: 27  PKPAESF-NLTYIQQLGSCSYSVVISTSCLSPAYTRDQISLSFGDAYGNQIYVPRLDDPS 86
           P P +SF     ++   +CSY+V+I TSC S +YTRD+IS+SFGD YGN++YV RLDDPS
Sbjct: 30  PLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDPS 89

Query: 87  RRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIPTTVRISGDNSRPVTFNYNTAIPG 146
            R FE+CSSDT+ I+GPC   +CY+YL R G D W P  V+I G + R VTF YN  +P 
Sbjct: 90  SRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPN 149

Query: 147 DVWFGFNLC---GHPSSSNRISS 166
            VW+GFN+C   G+  SS  IS+
Sbjct: 150 SVWYGFNVCNGIGNTKSSQPIST 172

[Close]

BLAST of CsGy3G016370 vs. Swiss-Prot
Match: sp|Q9LYP6|ATS3_ARATH (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.4e-26
Identity = 65/158 (41.14%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 10  LLTSAILFPFLEATELLPKPAESFNLTYIQ-QLGSCSYSVVISTSCLSPAYTRDQISLSF 69
           L  S + F F+  T        +F+L+ IQ Q G+C Y+VV+ TSCLSP  TRDQIS+ F
Sbjct: 6   LSVSFLFFAFIFVT-------HAFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVF 65

Query: 70  GDAYGNQIYVPRLDDPSRRI--FERCSSDTFGINGPCAYQ-ICYVYLYRTGPDAWIPTTV 129
           GDA GN++Y P+L    R      +CS++TF + G C    IC +Y+ R GPD W+P ++
Sbjct: 66  GDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESI 125

Query: 130 RISGDNSRPVTFNYNTAIPG-DVWFGFNLC---GHPSS 160
            I  + S+ V F+++ ++P  + W+G N C   G PSS
Sbjct: 126 EIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTTGRPSS 156

[Close]

BLAST of CsGy3G016370 vs. TrEMBL
Match: tr|A0A0A0L5P4|A0A0A0L5P4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177980 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 2.5e-100
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MDIKGVLCLLLTSAILFPFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYT 60
           MDIKGVLCLLLTSAILF FLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYT
Sbjct: 1   MDIKGVLCLLLTSAILFSFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYT 60

Query: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW 120
           RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW
Sbjct: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW 120

Query: 121 IPTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVILVSIILL 180
           IPTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVI+VSIILL
Sbjct: 121 IPTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVIIVSIILL 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 182

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BLAST of CsGy3G016370 vs. TrEMBL
Match: tr|A0A1S3AXZ5|A0A1S3AXZ5_CUCME (uncharacterized protein LOC103484016 OS=Cucumis melo OX=3656 GN=LOC103484016 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 4.1e-95
Identity = 173/182 (95.05%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDIKGVLCLLLTSAILFPFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYT 60
           MDIKGVLCLLLTSAILFP LEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSP YT
Sbjct: 1   MDIKGVLCLLLTSAILFPSLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPTYT 60

Query: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW 120
           RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW
Sbjct: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW 120

Query: 121 IPTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVILVSIILL 180
           IPTTV ISG NSRPVTFNYNTAIP DVWFGFNLCGHPSSSN IS CIG FYVILVSI+LL
Sbjct: 121 IPTTVTISGHNSRPVTFNYNTAIPSDVWFGFNLCGHPSSSNHISGCIGCFYVILVSILLL 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 182

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BLAST of CsGy3G016370 vs. TrEMBL
Match: tr|A0A067JQT7|A0A067JQT7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26201 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.5e-57
Identity = 112/181 (61.88%), Postives = 135/181 (74.59%), Query Frame = 0


Query: 4   KGVLCLLLTSAILF--PFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYTR 63
           K V  LL   A+LF     E+  L P+  +SFNL+ IQ +GSCSY V++STSC SP YTR
Sbjct: 21  KPVYSLLFYFALLFIQSKAESISLKPQALDSFNLSLIQNVGSCSYRVIVSTSCSSPKYTR 80

Query: 64  DQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWI 123
           DQISLSFGDAYGNQIY PRLDDPS   FERCSSDTF I+GPCAYQICYVYLYRTGPD W 
Sbjct: 81  DQISLSFGDAYGNQIYAPRLDDPSSNTFERCSSDTFQISGPCAYQICYVYLYRTGPDGWK 140

Query: 124 PTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVILVSIILLL 183
           P +V+I G NS PV F+YNT IP + W+GFNLC   +SS +I    GWF V+++S+ +++
Sbjct: 141 PESVKIYGYNSNPVRFDYNTFIPSNTWYGFNLC-QSASSAQIQRIPGWFMVLILSVAIVV 200

[Close]

BLAST of CsGy3G016370 vs. TrEMBL
Match: tr|W9S1G2|W9S1G2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012965 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 6.4e-56
Identity = 110/174 (63.22%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 3   IKGVLCLLLTSAILFPFLEA--TELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYT 62
           IKG L LLL  A  F   EA  + + P+PA+SFN++ +Q   +CSY+V+I+TSC S  YT
Sbjct: 2   IKG-LYLLLLFAFFFALSEAKLSIIQPQPAKSFNISSVQNARTCSYNVIITTSCSSTGYT 61

Query: 63  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAW 122
           RD+IS+SFGDAYGNQIY PRLDDPS R FERCSSDT+ INGPCAYQICYVYLYRTGPD W
Sbjct: 62  RDEISISFGDAYGNQIYAPRLDDPSTRAFERCSSDTYQINGPCAYQICYVYLYRTGPDGW 121

Query: 123 IPTTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVIL 175
            P +V+I G NS+ VTF YNT IPGD+W+GFNLC   +SS+       WF VIL
Sbjct: 122 KPESVKIYGYNSKAVTFYYNTFIPGDIWYGFNLCNDAASSSHQRFGRRWFLVIL 174

[Close]

BLAST of CsGy3G016370 vs. TrEMBL
Match: tr|A0A061G0A9|A0A061G0A9_THECC (DEAD-box ATP-dependent RNA helicase 7 OS=Theobroma cacao OX=3641 GN=TCM_015015 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.9e-55
Identity = 102/142 (71.83%), Postives = 117/142 (82.39%), Query Frame = 0


Query: 21  EATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYTRDQISLSFGDAYGNQIYVPR 80
           E+    P+  ESFN++YIQ LGSCSYSVVISTSC S +YTRDQIS++FGDAYGNQIYVPR
Sbjct: 234 ESISQKPQAFESFNVSYIQNLGSCSYSVVISTSCSSTSYTRDQISIAFGDAYGNQIYVPR 293

Query: 81  LDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIPTTVRISGDNSRPVTFNYN 140
           LDDPS R FE+CSSDTF I GPCAYQICYVYLYR+GPD W P +V+I G NSR VTF Y+
Sbjct: 294 LDDPSTRTFEQCSSDTFEIYGPCAYQICYVYLYRSGPDGWKPESVKIYGYNSRAVTFYYD 353

Query: 141 TAIPGDVWFGFNLCGHPSSSNR 163
           T IPGD+W+GFN C   SSS+R
Sbjct: 354 TFIPGDIWYGFNYCNTASSSHR 375

The following BLAST results are available for this feature:

BLAST of CsGy3G016370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148122.1	3.7e-100	98.90	PREDICTED: uncharacterized protein LOC101207117 [Cucumis sativus] >KGN57305.1 hy...	[more]
XP_008439126.1	6.2e-95	95.05	PREDICTED: uncharacterized protein LOC103484016 [Cucumis melo]	[more]
XP_022923164.1	8.4e-84	85.00	embryo-specific protein ATS3B-like [Cucurbita moschata]	[more]
XP_022984446.1	7.1e-83	83.89	embryo-specific protein ATS3B-like [Cucurbita maxima]	[more]
XP_023552620.1	2.1e-82	83.89	embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G016370 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62200.1	2.1e-52	55.06	Embryo-specific protein 3, (ATS3)	[more]
AT2G41475.1	4.3e-42	53.15	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	7.7e-31	47.41	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	1.4e-27	41.14	seed gene 3	[more]

BLAST of CsGy3G016370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NPM5\|ATS3B_ARATH	3.7e-51	55.06	Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1	[more]
sp\|Q681K2\|ATS3A_ARATH	7.8e-41	53.15	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]
sp\|Q9LYP6\|ATS3_ARATH	2.4e-26	41.14	Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1	[more]

BLAST of CsGy3G016370 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5P4\|A0A0A0L5P4_CUCSA	2.5e-100	98.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177980 PE=4 SV=1	[more]
tr\|A0A1S3AXZ5\|A0A1S3AXZ5_CUCME	4.1e-95	95.05	uncharacterized protein LOC103484016 OS=Cucumis melo OX=3656 GN=LOC103484016 PE=...	[more]
tr\|A0A067JQT7\|A0A067JQT7_JATCU	7.5e-57	61.88	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26201 PE=4 SV=1	[more]
tr\|W9S1G2\|W9S1G2_9ROSA	6.4e-56	63.22	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012965 PE=4 SV=1	[more]
tr\|A0A061G0A9\|A0A061G0A9_THECC	1.9e-55	71.83	DEAD-box ATP-dependent RNA helicase 7 OS=Theobroma cacao OX=3641 GN=TCM_015015 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036392	PLAT/LH2_dom_sf
IPR010417	Embryo-specific_ATS3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G016370.1	CsGy3G016370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 39..154 e-value: 1.1E-50 score: 170.6
None	No IPR available	GENE3D	G3DSA:2.60.60.20		coord: 42..147 e-value: 1.9E-5 score: 26.6
None	No IPR available	PANTHER	PTHR31718:SF8	EMBRYO-SPECIFIC PROTEIN 3	coord: 6..174
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 6..174
None	No IPR available	CDD	cd00113	PLAT	coord: 44..154 e-value: 5.17832E-27 score: 98.9504
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	SSF49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 40..151

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G016370	Cucumber (Gy14) v2	cgybcgybB087
CsGy3G016370	Cucumber (Gy14) v2	cgybcgybB091
CsGy3G016370	Cucurbita maxima (Rimu)	cgybcmaB325
CsGy3G016370	Cucurbita maxima (Rimu)	cgybcmaB342
CsGy3G016370	Cucurbita maxima (Rimu)	cgybcmaB352
CsGy3G016370	Cucurbita maxima (Rimu)	cgybcmaB394
CsGy3G016370	Cucurbita maxima (Rimu)	cgybcmaB399
CsGy3G016370	Cucurbita maxima (Rimu)	cgybcmaB463
CsGy3G016370	Cucurbita moschata (Rifu)	cgybcmoB296
CsGy3G016370	Cucurbita moschata (Rifu)	cgybcmoB312
CsGy3G016370	Cucurbita moschata (Rifu)	cgybcmoB324
CsGy3G016370	Cucurbita moschata (Rifu)	cgybcmoB365
CsGy3G016370	Cucurbita moschata (Rifu)	cgybcmoB371
CsGy3G016370	Cucurbita pepo (Zucchini)	cgybcpeB287
CsGy3G016370	Cucurbita pepo (Zucchini)	cgybcpeB314
CsGy3G016370	Cucurbita pepo (Zucchini)	cgybcpeB327
CsGy3G016370	Cucurbita pepo (Zucchini)	cgybcpeB427
CsGy3G016370	Cucumber (Chinese Long) v2	cgybcuB127
CsGy3G016370	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G016370	Cucumber (Chinese Long) v2	cgybcuB128
CsGy3G016370	Bottle gourd (USVL1VR-Ls)	cgyblsiB141
CsGy3G016370	Bottle gourd (USVL1VR-Ls)	cgyblsiB197
CsGy3G016370	Melon (DHL92) v3.5.1	cgybmeB141
CsGy3G016370	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G016370	Melon (DHL92) v3.6.1	cgybmedB137
CsGy3G016370	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G016370	Watermelon (Charleston Gray)	cgybwcgB191
CsGy3G016370	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G016370	Watermelon (97103) v1	cgybwmB217
CsGy3G016370	Watermelon (97103) v1	cgybwmB246
CsGy3G016370	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G016370	Wild cucumber (PI 183967)	cgybcpiB129
CsGy3G016370	Wild cucumber (PI 183967)	cgybcpiB130
CsGy3G016370	Silver-seed gourd	carcgybB0107
CsGy3G016370	Silver-seed gourd	carcgybB0707
CsGy3G016370	Silver-seed gourd	carcgybB0859
CsGy3G016370	Silver-seed gourd	carcgybB0906
CsGy3G016370	Silver-seed gourd	carcgybB0926
CsGy3G016370	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G016370	Cucumber (Chinese Long) v3	cgybcucB135
CsGy3G016370	Watermelon (97103) v2	cgybwmbB172
CsGy3G016370	Watermelon (97103) v2	cgybwmbB196