CsGy3G014650 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G014650
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 10784949 .. 10785140 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCGGTGAGAGCCTCGCCTTGGTCGCCGAGTAGGAAAGGGACGACGATGACGATGGCAACAACGACGGCCAGTAGAATGGCGTGGGGAGCTCCACCTTGGCGTTCTTCAATCATTTCCTTTGCTTCCAGTTTGAGAGTGACTTGTGTTTTTGAATTCAACTCTCTTTTTGGGTTGAAGAAGAAATAG

mRNA sequence

ATGGCATCGGTGAGAGCCTCGCCTTGGTCGCCGAGTAGGAAAGGGACGACGATGACGATGGCAACAACGACGGCCAGTAGAATGGCGTGGGGAGCTCCACCTTGGCGTTCTTCAATCATTTCCTTTGCTTCCAGTTTGAGAGTGACTTGTGTTTTTGAATTCAACTCTCTTTTTGGGTTGAAGAAGAAATAG

Coding sequence (CDS)

ATGGCATCGGTGAGAGCCTCGCCTTGGTCGCCGAGTAGGAAAGGGACGACGATGACGATGGCAACAACGACGGCCAGTAGAATGGCGTGGGGAGCTCCACCTTGGCGTTCTTCAATCATTTCCTTTGCTTCCAGTTTGAGAGTGACTTGTGTTTTTGAATTCAACTCTCTTTTTGGGTTGAAGAAGAAATAG

Protein sequence

MASVRASPWSPSRKGTTMTMATTTASRMAWGAPPWRSSIISFASSLRVTCVFEFNSLFGLKKK
Homology
[Close]
BLAST of CsGy3G014650 vs. NCBI nr
Match: KGN57119.1 (hypothetical protein Csa_3G154400 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 4.7e-26
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1   MASVRASPWSPSRKGTTMTMATTTASRMAWGAPPWRSSIISFASSLRVTCVFEFNSLFGL 60
           MASVRASPWSPSRKGTTMTMATTTASRMAWGAPPWRSSIISFASSLRVTCVFEFNSLFGL
Sbjct: 61  MASVRASPWSPSRKGTTMTMATTTASRMAWGAPPWRSSIISFASSLRVTCVFEFNSLFGL 120

Query: 61  KKK 64
           KKK
Sbjct: 121 KKK 123

[Close]
BLAST of CsGy3G014650 vs. NCBI nr
Match: POE49693.1 (hypothetical protein CFP56_31145 [Quercus suber])

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-04
Identity = 29/40 (72.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 1   MASVRASPWSPSRKGTTMTMATTTASRMAWGAPPWRSSII 41
           MASV ASPWSP+R GT   MATTTASR  WGAP   SSII
Sbjct: 61  MASVMASPWSPTRSGTASIMATTTASRTPWGAPACLSSII 100

[Close]
BLAST of CsGy3G014650 vs. TrEMBL
Match: tr|A0A0A0L7X6|A0A0A0L7X6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154400 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.1e-26
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1   MASVRASPWSPSRKGTTMTMATTTASRMAWGAPPWRSSIISFASSLRVTCVFEFNSLFGL 60
           MASVRASPWSPSRKGTTMTMATTTASRMAWGAPPWRSSIISFASSLRVTCVFEFNSLFGL
Sbjct: 61  MASVRASPWSPSRKGTTMTMATTTASRMAWGAPPWRSSIISFASSLRVTCVFEFNSLFGL 120

Query: 61  KKK 64
           KKK
Sbjct: 121 KKK 123

[Close]
BLAST of CsGy3G014650 vs. TrEMBL
Match: tr|A0A2P4H088|A0A2P4H088_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_31145 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.8e-05
Identity = 29/40 (72.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 1   MASVRASPWSPSRKGTTMTMATTTASRMAWGAPPWRSSII 41
           MASV ASPWSP+R GT   MATTTASR  WGAP   SSII
Sbjct: 61  MASVMASPWSPTRSGTASIMATTTASRTPWGAPACLSSII 100

The following BLAST results are available for this feature:
BLAST of CsGy3G014650 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57119.14.7e-26100.00hypothetical protein Csa_3G154400 [Cucumis sativus][more]
POE49693.11.0e-0472.50hypothetical protein CFP56_31145 [Quercus suber][more]
BLAST of CsGy3G014650 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G014650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G014650 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L7X6|A0A0A0L7X6_CUCSA3.1e-26100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154400 PE=4 SV=1[more]
tr|A0A2P4H088|A0A2P4H088_QUESU6.8e-0572.50Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_31145 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G014650.1CsGy3G014650.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G014650Csa3G154400Cucumber (Chinese Long) v2cgybcuB109
CsGy3G014650CsaV3_3G014740Cucumber (Chinese Long) v3cgybcucB117
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G014650Cucumber (Chinese Long) v3cgybcucB107
CsGy3G014650Watermelon (97103) v2cgybwmbB196
CsGy3G014650Watermelon (97103) v2cgybwmbB222
CsGy3G014650Wax gourdcgybwgoB248
CsGy3G014650Wax gourdcgybwgoB257
CsGy3G014650Cucumber (Gy14) v2cgybcgybB021
CsGy3G014650Cucurbita maxima (Rimu)cgybcmaB274
CsGy3G014650Cucurbita maxima (Rimu)cgybcmaB318
CsGy3G014650Cucurbita maxima (Rimu)cgybcmaB345
CsGy3G014650Cucurbita maxima (Rimu)cgybcmaB427
CsGy3G014650Cucurbita maxima (Rimu)cgybcmaB454
CsGy3G014650Cucurbita moschata (Rifu)cgybcmoB323
CsGy3G014650Cucurbita moschata (Rifu)cgybcmoB290
CsGy3G014650Cucurbita moschata (Rifu)cgybcmoB317
CsGy3G014650Cucurbita moschata (Rifu)cgybcmoB401
CsGy3G014650Cucurbita moschata (Rifu)cgybcmoB421
CsGy3G014650Cucurbita pepo (Zucchini)cgybcpeB303
CsGy3G014650Cucurbita pepo (Zucchini)cgybcpeB309
CsGy3G014650Cucurbita pepo (Zucchini)cgybcpeB348
CsGy3G014650Cucurbita pepo (Zucchini)cgybcpeB406
CsGy3G014650Cucurbita pepo (Zucchini)cgybcpeB454
CsGy3G014650Bottle gourd (USVL1VR-Ls)cgyblsiB136
CsGy3G014650Bottle gourd (USVL1VR-Ls)cgyblsiB184
CsGy3G014650Melon (DHL92) v3.5.1cgybmeB149
CsGy3G014650Melon (DHL92) v3.5.1cgybmeB200
CsGy3G014650Melon (DHL92) v3.6.1cgybmedB148
CsGy3G014650Melon (DHL92) v3.6.1cgybmedB165
CsGy3G014650Melon (DHL92) v3.6.1cgybmedB201
CsGy3G014650Watermelon (Charleston Gray)cgybwcgB203
CsGy3G014650Watermelon (Charleston Gray)cgybwcgB230
CsGy3G014650Watermelon (97103) v1cgybwmB217
CsGy3G014650Watermelon (97103) v1cgybwmB262
CsGy3G014650Wild cucumber (PI 183967)cgybcpiB110
CsGy3G014650Silver-seed gourdcarcgybB0072
CsGy3G014650Silver-seed gourdcarcgybB0605
CsGy3G014650Silver-seed gourdcarcgybB0700
CsGy3G014650Silver-seed gourdcarcgybB0828