CsGy3G014450 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G014450
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transcription termination factor MTEF1, chloroplastic-like
Location	Chr3 : 10676702 .. 10677817 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAACTTCTTTCGCACAATCCTTCTACTTAGATCTCCATCCTCACTCTTTTCTCACGGATTTTCCCAAAGTCCGTTCAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCCAAATCTGCTCTGTTGTCTTCTAATGCTGTTCAGCTCAATAATAATTCGAAGGCTGTCATTGGGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGCCAAGAGGTATCCTCAAATTATTTCTATGAACCCCGAGAAAATCCTATCGCCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAGTTCCCTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCATCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCACTGCTATAAAGCGCTTTCCGGGTATTCTCGGTTGGGATCTTCGAACTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAAGTTATCTTCAGCGGCAGCCTAAAATGTTCTTAACAAGTTCCATCCGATTCAAGAAGGCTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATGAGAAGGTTGAAGGTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAAAATCCACGTTGTATGAGTGCTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGTGAACCATTTTTGGTTGCTAGAACACCAACTTTAGTTTCATATAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGGTGTCAAAGTGTTTGATTAAGAAGTACGCGCATTTTGCTTTGTTTTTTAACTCTTCTGCAAACCTTTTCATAGACAAATTCATCAACCCTCATAAGGAGCAGATTCCTGAATTGTTGGAGTTGTATAAAGAGAAATTAATGGATTTAGAAGATGAACAGGTTCGATCTCCTTGA

mRNA sequence

ATGTCTAACTTCTTTCGCACAATCCTTCTACTTAGATCTCCATCCTCACTCTTTTCTCACGGATTTTCCCAAAGTCCGTTCAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCCAAATCTGCTCTGTTGTCTTCTAATGCTGTTCAGCTCAATAATAATTCGAAGGCTGTCATTGGGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGCCAAGAGGTATCCTCAAATTATTTCTATGAACCCCGAGAAAATCCTATCGCCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAGTTCCCTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCATCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCACTGCTATAAAGCGCTTTCCGGGTATTCTCGGTTGGGATCTTCGAACTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAAGTTATCTTCAGCGGCAGCCTAAAATGTTCTTAACAAGTTCCATCCGATTCAAGAAGGCTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATGAGAAGGTTGAAGGTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAAAATCCACGTTGTATGAGTGCTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGTGAACCATTTTTGGTTGCTAGAACACCAACTTTAGTTTCATATAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGGTGTCAAAGTGTTTGATTAAGAAGTACGCGCATTTTGCTTTGTTTTTTAACTCTTCTGCAAACCTTTTCATAGACAAATTCATCAACCCTCATAAGGAGCAGATTCCTGAATTGTTGGAGTTGTATAAAGAGAAATTAATGGATTTAGAAGATGAACAGGTTCGATCTCCTTGA

Coding sequence (CDS)

ATGTCTAACTTCTTTCGCACAATCCTTCTACTTAGATCTCCATCCTCACTCTTTTCTCACGGATTTTCCCAAAGTCCGTTCAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCCAAATCTGCTCTGTTGTCTTCTAATGCTGTTCAGCTCAATAATAATTCGAAGGCTGTCATTGGGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGCCAAGAGGTATCCTCAAATTATTTCTATGAACCCCGAGAAAATCCTATCGCCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAGTTCCCTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCATCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCACTGCTATAAAGCGCTTTCCGGGTATTCTCGGTTGGGATCTTCGAACTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAAGTTATCTTCAGCGGCAGCCTAAAATGTTCTTAACAAGTTCCATCCGATTCAAGAAGGCTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATGAGAAGGTTGAAGGTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAAAATCCACGTTGTATGAGTGCTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGTGAACCATTTTTGGTTGCTAGAACACCAACTTTAGTTTCATATAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGGTGTCAAAGTGTTTGATTAAGAAGTACGCGCATTTTGCTTTGTTTTTTAACTCTTCTGCAAACCTTTTCATAGACAAATTCATCAACCCTCATAAGGAGCAGATTCCTGAATTGTTGGAGTTGTATAAAGAGAAATTAATGGATTTAGAAGATGAACAGGTTCGATCTCCTTGA

Protein sequence

MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSALLSSNAVQLNNNSKAVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSLKKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKLMDLEDEQVRSP

Homology

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BLAST of CsGy3G014450 vs. NCBI nr
Match: XP_011652765.1 (PREDICTED: uncharacterized protein LOC101204411 [Cucumis sativus])

HSP 1 Score: 626.7 bits (1615), Expect = 5.0e-176
Identity = 331/367 (90.19%), Postives = 331/367 (90.19%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSALLSSNAVQLNNNSK 60
           MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSA L SNAVQLNNNSK
Sbjct: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSK               
Sbjct: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSK--------------- 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
                              AVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP
Sbjct: 121 -------------------AVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV
Sbjct: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL
Sbjct: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL
Sbjct: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 333

Query: 361 MDLEDEQ 368
           MDLEDEQ
Sbjct: 361 MDLEDEQ 333

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BLAST of CsGy3G014450 vs. NCBI nr
Match: XP_016898974.1 (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 552.0 bits (1421), Expect = 1.6e-153
Identity = 281/362 (77.62%), Postives = 311/362 (85.91%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSALLSSNAVQLNNNSK 60
           MSN FR ILLLRSPSS FSHGFS+ P K LRYLSTSSEIVSSPKSA L+SNAVQL NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           A++ LLANHGFSESQISD+ KR  +I+ +NPEKILSPKLLFFQSKGLSSPEIVKLVCS+P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
           CVLTGSLNKRIIP+FDY+QAV GSEEKTL  IKRF GIL WDLR SVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP++FL + +RFK+AVERV EMGFNPQ+LQFVVAVF LR+MTKSTWD+KV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEIR+AFRK+P CM+ SEDKING MDFFVNK+GCE    AR P L+S SL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRGY+YQVL+SK LIKK+ + A FF S    FI+KFINPH EQI  LLELY+EKL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

Query: 361 MD 363
            D
Sbjct: 361 KD 362

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BLAST of CsGy3G014450 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 539.7 bits (1389), Expect = 8.0e-150
Identity = 283/363 (77.96%), Postives = 314/363 (86.50%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSALLSSNAVQLNNNSK 60
           MS  FR ILLLRSPSS+FSHGFS+SP KSLR+LSTSSEIVSSPKSA L+SNAVQL NN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           AVI LLANHGFS+SQISD+ +R PQI++ NPEKIL PKLLFFQSKGLSSPEI KLVC+ P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
            VLTGSLNKRII +FDYIQAVLGSEEKTL AIK+F GIL  DL+ SVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP++F+ SSIRFK+ VERVTEMGFNPQRLQF+VAVFALR+MTKSTWD+KV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEI LAF+++P CM  SEDKINGAMDFFVNK+GCE   VAR P L+S SL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHK-EQIPELLELYKEK 360
           KKR+ PRGYVYQVL+ K LIKK A+  LF +SS   FI+KFINPHK EQIP LLELYK+K
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMD 363
           LMD
Sbjct: 361 LMD 363

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BLAST of CsGy3G014450 vs. NCBI nr
Match: XP_004134480.2 (PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus])

HSP 1 Score: 531.9 bits (1369), Expect = 1.7e-147
Identity = 279/362 (77.07%), Postives = 307/362 (84.81%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSALLSSNAVQLNNNSK 60
           MS FFRT+LLLRSPSS+FSHGFS+SP KSL YLSTSSEIVSSP+SA L+SNAVQL NN K
Sbjct: 1   MSIFFRTLLLLRSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           AVI LLANH FS+SQIS LA RYPQI+S NPEK L PKLLFFQSKGLSSPEI +LV S P
Sbjct: 61  AVIALLANHVFSQSQISYLANRYPQILSANPEKTLLPKLLFFQSKGLSSPEIFELVRSDP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
            VL  S+NKRIIP+FDYIQAVLGSEEKTL  IK+F GIL  DLR SVGPNIEILKQIGVP
Sbjct: 121 WVLGASINKRIIPAFDYIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DS+I  Y   QP++FLT+SIRFK+ VERV EMGFNPQ+ QFVVAVFALRSMTKSTWD+KV
Sbjct: 181 DSSILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E  RKWGLSEE+IRLAFR+NP CM  SEDKINGAMDFFVNKMGCE    AR P L+S+SL
Sbjct: 241 EILRKWGLSEEDIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRGYVYQVL+SK LIKK  +  LFF S    FI+K+INP KEQIPELLELYK+KL
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKL 360

Query: 361 MD 363
           M+
Sbjct: 361 ME 362

[Close]

BLAST of CsGy3G014450 vs. NCBI nr
Match: XP_004134483.2 (PREDICTED: uncharacterized protein LOC101210242 [Cucumis sativus])

HSP 1 Score: 531.6 bits (1368), Expect = 2.2e-147
Identity = 279/362 (77.07%), Postives = 311/362 (85.91%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSALLSSNAVQLNNNSK 60
           MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSA LSSNAVQL NN K
Sbjct: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           A+I LL N GFS+SQISDLA R+P+I+SMNPEKIL PKLLF QSKGLSSPE+VK+VC+VP
Sbjct: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
              TGSLNKRIIP+FDYIQAVLG+EEKTL AIKRF G+L  DLR SVGPNIEILKQIGVP
Sbjct: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP+ FL + IRFK+ VERVTEMGFN Q+LQF+VAVFALR+MTKSTWD+KV
Sbjct: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEE+I  AFR++P CM  SEDKINGAMDFFVNKMGC+    A  P LVS S+
Sbjct: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKR+LPRG+VYQVLVSK LIK  A+F   F SS   FI+K+IN HKEQIP LLELY++KL
Sbjct: 301 KKRLLPRGHVYQVLVSKGLIKN-ANFTSLFCSSEKRFIEKYINLHKEQIPGLLELYEQKL 360

Query: 361 MD 363
           ++
Sbjct: 361 VE 361

[Close]

BLAST of CsGy3G014450 vs. TAIR10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-42
Identity = 105/331 (31.72%), Postives = 166/331 (50.15%), Query Frame = 0


Query: 29  SLRYLSTSSEIVSSPKSALLSSNAVQLNNNSK--AVIGLLANHGFSESQISDLAKRYPQI 88
           +L YL  S  +  SP SA ++S  + L++  +   V+ LL +HGF+ +QIS L K+ P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  ISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEE 148
           +  N E +L PKL FF S G+S   + + + S                            
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASXXXXXXXXXXXXXXXXXXXXXXXXXXXX 190

Query: 149 KTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKKAV 208
                                      + + GVP+  I   L   P+  +  +  F+   
Sbjct: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 ERVTEMGFNPQRLQFVVAVFALRSM-TKSTWDEKVEGYRKWGLSEEEIRLAFRKNPRCMS 268
           ++  EMGFNPQ+  FV+A+ AL     KS WD+  E Y++WG SE++I  AF+K+P CM 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 ASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSLKKRILPRGYVYQVLVSKCLIKKYAH 328
            SE KIN  M++FVN+M   P  +A+ P ++ +SL+KRI+PR  V +VLVS  L+K+   
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 FALFFNSSANLFIDKFINPHKEQIPELLELY 357
                     +F++K +  ++E++PEL+ LY
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of CsGy3G014450 vs. TAIR10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 159.1 bits (401), Expect = 5.4e-39
Identity = 97/305 (31.80%), Postives = 171/305 (56.07%), Query Frame = 0


Query: 60  KAVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSV 119
           ++VI +L ++ FS++QI    + +P+++  N EKIL PKL FF+  G +   + K V   
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 120 PCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPG--ILGWDLRTSVGPNIEILKQI 179
             V+  SL K++IP+ + +++++  + + L  I    G  +L  D    + PNI  L+  
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 180 GVPDSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWD 239
           G+  S ++S L+RQP++F  S  + +  V R  ++GF       V AV +L S+++ T+D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 240 EKVEGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVS 299
            KV+ +   G SE+EI    R++P  +  SEDK+    +F++ +MG E   +A+ P ++S
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 300 YSLKKRILPRGYVYQVLVSKCLI----KKYAHFALFFNSSANLFIDKFINPHKEQI-PEL 358
           Y+L+KR++PR  V Q+L  K L+    KK  +       +   F++K++    ++I  EL
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEEL 371

[Close]

BLAST of CsGy3G014450 vs. TAIR10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 158.7 bits (400), Expect = 7.0e-39
Identity = 88/316 (27.85%), Postives = 171/316 (54.11%), Query Frame = 0


Query: 42  SPKSALLSSNAVQLNNNSK--AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKL 101
           S +SA  +S  V+L ++ K  +V+ L  +HGF+  QI+ + K +P+++S++PE ++SPK 
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKX 128

Query: 102 LFFQSKGLSSPEIVKLVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGIL 161
                                       +KR+IP +D ++++L  EE  +  +KR     
Sbjct: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXHKRLIPCYDSLKSILVEEESVVKCLKRGIRCF 188

Query: 162 GWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRL 221
              +   V   + I +++GVPD +I   +Q  P  F +   RF + + RV   GF+P++ 
Sbjct: 189 SLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKA 248

Query: 222 QFVVAVFALRSMTKSTWDEKVEGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFV 281
            FV A+ A    ++S  + K + ++ +G S+E+   A  + P C++ S++KI   +++ V
Sbjct: 249 GFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLV 308

Query: 282 NKMGCEPFLVARTPTLVSYSLKKRILPRGYVYQVLVSKCLIKKY-AHFALFFNSSANLFI 341
           N +G +   +   P ++S S++KRI PR  V  +L+SK L+KK   ++       ++ F+
Sbjct: 309 NNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFM 368

Query: 342 DKFINPHKEQIPELLE 355
           DKF+  +++++P+L++
Sbjct: 369 DKFVLKYQDEMPQLVQ 384

[Close]

BLAST of CsGy3G014450 vs. TAIR10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-26
Identity = 86/339 (25.37%), Postives = 164/339 (48.38%), Query Frame = 0


Query: 58  NSKAVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVC 117
           N  +V+ L  ++GF++SQIS +   YP ++  + +K L  KL   QS+G SS EI ++V 
Sbjct: 83  NPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVS 142

Query: 118 SVPCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQI 177
           +VP +L     K I   +D ++ ++ ++  T ++ +   G  G  +R     N+  L+++
Sbjct: 143 TVPRILG---KKSITVYYDAVKDIIVAD--TSSSYELPQGSQGNKIR-----NVSALREL 202

Query: 178 GVPDSNISSYL--QRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKST 237
           G+P   +   L  + QP   +     F  ++++V EMGF+P   +FV+A+  L  M++ T
Sbjct: 203 GMPSRLLLPLLVSKSQP---VCGKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKT 262

Query: 238 WDEKVEGYRKWGLSEEEIRLAFRKNPR--------------------------------- 297
            +EKV  +R  G + +++   F+K P                                  
Sbjct: 263 IEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRY 322

Query: 298 --CMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSLKKRILPRGYVYQVLVSKCLI 357
             C+  S + +    +F V KM      +   P +  YS++KRI+PR  + + L+SK L+
Sbjct: 323 PPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLL 382

[Close]

BLAST of CsGy3G014450 vs. TAIR10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 115.5 bits (288), Expect = 6.8e-26
Identity = 87/379 (22.96%), Postives = 180/379 (47.49%), Query Frame = 0


Query: 29  SLRYLSTSSEIVSSPKSALLSSNAVQLNNNSKAVIGLLANHGFSESQISDLAKRYPQIIS 88
           ++ YL  S  + +    ++    +     N  +V+ LL +HGF++SQIS++ + +P+++ 
Sbjct: 58  TVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLI 117

Query: 89  MNPEKILSPKLLFFQSKGLSSPEIVKLVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEEKT 148
           ++ EK L+PKL F QS G SS E+ + V +VP +L     K +   +D+++ ++   +K+
Sbjct: 118 LDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKVII-EADKS 177

Query: 149 LTAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKKAVER 208
               K    +     + +   N+ +L+++GVP   + S L       +    +FK+++++
Sbjct: 178 SKLEKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSLLISDAG-DVCGKEKFKESLKK 237

Query: 209 VTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEGYRKWGLSEEEIRLAFRKNPRCMS--- 268
             E+GF+P    FV A+  L  ++    + K    ++ GL+ +++   F+K P  ++   
Sbjct: 238 AVEIGFDPTTATFVKALNVLYGLSDKGIENKFNACKRLGLAVDDVWAMFKKWPNILTKXX 297

Query: 269 --------------------------------ASEDKINGAMDFFVNKMGCEPFLVARTP 328
                                                +    +F V +M      VA  P
Sbjct: 298 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKTKTEFLVTEMNWPLKAVASIP 357

Query: 329 TLVSYSLKKRILPRGYVYQVLVSKCLIK-KYAHFALFFNSSANLFIDKFINPH--KEQIP 370
            ++ YSL+KR +PR  V +VL+SK L++ +    +    S++ +F+  ++  H  K+ + 
Sbjct: 358 QVLGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLTSTSEVFLYMYVRKHDDKQLVA 417

[Close]

BLAST of CsGy3G014450 vs. TrEMBL
Match: tr|A0A1S4DSL1|A0A1S4DSL1_CUCME (uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.0e-153
Identity = 281/362 (77.62%), Postives = 311/362 (85.91%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSALLSSNAVQLNNNSK 60
           MSN FR ILLLRSPSS FSHGFS+ P K LRYLSTSSEIVSSPKSA L+SNAVQL NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           A++ LLANHGFSESQISD+ KR  +I+ +NPEKILSPKLLFFQSKGLSSPEIVKLVCS+P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
           CVLTGSLNKRIIP+FDY+QAV GSEEKTL  IKRF GIL WDLR SVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP++FL + +RFK+AVERV EMGFNPQ+LQFVVAVF LR+MTKSTWD+KV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEIR+AFRK+P CM+ SEDKING MDFFVNK+GCE    AR P L+S SL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRGY+YQVL+SK LIKK+ + A FF S    FI+KFINPH EQI  LLELY+EKL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

Query: 361 MD 363
            D
Sbjct: 361 KD 362

[Close]

BLAST of CsGy3G014450 vs. TrEMBL
Match: tr|A0A1S3AYM0|A0A1S3AYM0_CUCME (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 5.3e-150
Identity = 283/363 (77.96%), Postives = 314/363 (86.50%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSALLSSNAVQLNNNSK 60
           MS  FR ILLLRSPSS+FSHGFS+SP KSLR+LSTSSEIVSSPKSA L+SNAVQL NN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           AVI LLANHGFS+SQISD+ +R PQI++ NPEKIL PKLLFFQSKGLSSPEI KLVC+ P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
            VLTGSLNKRII +FDYIQAVLGSEEKTL AIK+F GIL  DL+ SVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP++F+ SSIRFK+ VERVTEMGFNPQRLQF+VAVFALR+MTKSTWD+KV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEI LAF+++P CM  SEDKINGAMDFFVNK+GCE   VAR P L+S SL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHK-EQIPELLELYKEK 360
           KKR+ PRGYVYQVL+ K LIKK A+  LF +SS   FI+KFINPHK EQIP LLELYK+K
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMD 363
           LMD
Sbjct: 361 LMD 363

[Close]

BLAST of CsGy3G014450 vs. TrEMBL
Match: tr|A0A1S4DSL0|A0A1S4DSL0_CUCME (uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 4.7e-146
Identity = 276/362 (76.24%), Postives = 305/362 (84.25%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSALLSSNAVQLNNNSK 60
           MS  FR ILLLRSPSS+FSHGFS+   KSLR+LSTSSEIVSSPKSA L+SNA        
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECSLKSLRFLSTSSEIVSSPKSASLASNA-------- 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           A++ LLANHGFSESQISD+AKR  +I+S+NP+KILSPKLLFFQSKGLSSPEIVKLVCS+P
Sbjct: 61  ALVALLANHGFSESQISDIAKRQCKILSLNPQKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
           CVLTGSLNKRIIP+FDY+QAVLGSEEKTL  IK+F GIL  DLR SVGPNIEILKQIGV 
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVLGSEEKTLATIKKFAGILIKDLRISVGPNIEILKQIGVQ 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP+MFL +SIRFK+ VERVTEMGFNP RLQFVVAVFALRSMTKSTWD+KV
Sbjct: 181 DSNILKYLQYQPRMFLINSIRFKEVVERVTEMGFNPDRLQFVVAVFALRSMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEE  LAFR+NP CM+ SEDKIN  MDFFVNK+G E    AR P L+SYSL
Sbjct: 241 EVYRKWGLSEEEFSLAFRRNPLCMAFSEDKINAVMDFFVNKIGWESSFFARRPALISYSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRGYVYQVL+SK LIKK+    LFF  +   FI+K INPHKEQIP LLELYK+K+
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKHKSHFLFFECTEKRFIEKIINPHKEQIPGLLELYKQKV 354

Query: 361 MD 363
           MD
Sbjct: 361 MD 354

[Close]

BLAST of CsGy3G014450 vs. TrEMBL
Match: tr|A0A1S4DSP1|A0A1S4DSP1_CUCME (uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 1.6e-141
Identity = 271/362 (74.86%), Postives = 299/362 (82.60%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSALLSSNAVQLNNNSK 60
           MSN FR ILLLRSPS +F  GFSQSP KSLRYLSTSSEIVSSP+SA L+SNAVQL  N K
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           AVI  LA++GFSESQIS   KR+PQI+S NPEKIL PKLLFFQSKGLSSPEIVKLVCS P
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
             L  SLNKRIIP+FDYIQAVLGS EK L  IK F  IL  DL  SVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP++FL +SIRFK+ VERVTEMGFNPQ+LQFVVAVFALR+MTKSTWD+KV
Sbjct: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEIRL F+++P CM  SEDKINGAMDFFVNK+GCE   VAR P L+S SL
Sbjct: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKR+ PRGYVYQVL++K LIKK+ +   FF      FI+K INPHKEQIP LLELY++KL
Sbjct: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360

Query: 361 MD 363
           MD
Sbjct: 361 MD 361

[Close]

BLAST of CsGy3G014450 vs. TrEMBL
Match: tr|A0A1S4DSK2|A0A1S4DSK2_CUCME (uncharacterized protein LOC103483822 OS=Cucumis melo OX=3656 GN=LOC103483822 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 2.7e-138
Identity = 270/371 (72.78%), Postives = 297/371 (80.05%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSALLSSNAVQLNNNSK 60
           MS  FR ILLLRSPSS+FSHGFS+ P KSLR+LSTSSE+VSSPKSA L+SNAV L NN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
            VI LLANHGFS+SQISDLAKR PQI S NPE+ L PKLLF QSK               
Sbjct: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSK--------------- 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
                        +FDYIQAVLG+EEK + AIKRF GIL  DLR SVGPNIEILKQIGVP
Sbjct: 121 -------------AFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNIS+YLQ+QP+MF  SSIRFK+ VERVTEMGFNPQRLQF+VAVFALRSMTKSTWD+KV
Sbjct: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEIRLAFRKNP  M ASEDKIN  MDFFVNK+GCE FLVAR P L++ SL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRGY+YQVL+SK LIK   +F+  F+ S N FI+KFINPHKEQIP LL+LYK+KL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIK---NFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKL 340

Query: 361 MDLEDEQVRSP 372
           MDLEDEQVRSP
Sbjct: 361 MDLEDEQVRSP 340

The following BLAST results are available for this feature:

BLAST of CsGy3G014450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652765.1	5.0e-176	90.19	PREDICTED: uncharacterized protein LOC101204411 [Cucumis sativus]	[more]
XP_016898974.1	1.6e-153	77.62	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]
XP_008439382.1	8.0e-150	77.96	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]	[more]
XP_004134480.2	1.7e-147	77.07	PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus]	[more]
XP_004134483.2	2.2e-147	77.07	PREDICTED: uncharacterized protein LOC101210242 [Cucumis sativus]	[more]

BLAST of CsGy3G014450 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	6.8e-42	31.72	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	5.4e-39	31.80	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	7.0e-39	27.85	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	1.0e-26	25.37	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	6.8e-26	22.96	Mitochondrial transcription termination factor family protein	[more]

BLAST of CsGy3G014450 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G014450 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DSL1\|A0A1S4DSL1_CUCME	1.0e-153	77.62	uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=...	[more]
tr\|A0A1S3AYM0\|A0A1S3AYM0_CUCME	5.3e-150	77.96	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
tr\|A0A1S4DSL0\|A0A1S4DSL0_CUCME	4.7e-146	76.24	uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=...	[more]
tr\|A0A1S4DSP1\|A0A1S4DSP1_CUCME	1.6e-141	74.86	uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=...	[more]
tr\|A0A1S4DSK2\|A0A1S4DSK2_CUCME	2.7e-138	72.78	uncharacterized protein LOC103483822 OS=Cucumis melo OX=3656 GN=LOC103483822 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR038538	MTERF_sf
IPR003690	MTERF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G014450.1	CsGy3G014450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 346..366
None	No IPR available	PANTHER	PTHR13068:SF45	SUBFAMILY NOT NAMED	coord: 39..364
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 39..364
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 77..108 e-value: 0.0012 score: 28.1 coord: 254..285 e-value: 0.48 score: 19.5 coord: 113..145 e-value: 0.55 score: 19.3 coord: 149..180 e-value: 11.0 score: 14.9 coord: 286..321 e-value: 41.0 score: 13.1 coord: 185..215 e-value: 730.0 score: 5.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 185..320 e-value: 1.2E-15 score: 57.2 coord: 64..223 e-value: 2.7E-23 score: 82.3
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	G3DSA:1.25.70.10		coord: 36..229 e-value: 9.4E-25 score: 89.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G014450	Cucumber (Gy14) v2	cgybcgybB111
CsGy3G014450	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G014450	Cucurbita maxima (Rimu)	cgybcmaB345
CsGy3G014450	Cucurbita maxima (Rimu)	cgybcmaB351
CsGy3G014450	Cucurbita maxima (Rimu)	cgybcmaB427
CsGy3G014450	Cucurbita maxima (Rimu)	cgybcmaB454
CsGy3G014450	Cucurbita moschata (Rifu)	cgybcmoB323
CsGy3G014450	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G014450	Cucurbita moschata (Rifu)	cgybcmoB317
CsGy3G014450	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G014450	Cucurbita moschata (Rifu)	cgybcmoB421
CsGy3G014450	Cucurbita pepo (Zucchini)	cgybcpeB303
CsGy3G014450	Cucurbita pepo (Zucchini)	cgybcpeB309
CsGy3G014450	Cucurbita pepo (Zucchini)	cgybcpeB348
CsGy3G014450	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G014450	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G014450	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G014450	Bottle gourd (USVL1VR-Ls)	cgyblsiB136
CsGy3G014450	Bottle gourd (USVL1VR-Ls)	cgyblsiB184
CsGy3G014450	Melon (DHL92) v3.5.1	cgybmeB149
CsGy3G014450	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G014450	Melon (DHL92) v3.6.1	cgybmedB148
CsGy3G014450	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G014450	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G014450	Watermelon (Charleston Gray)	cgybwcgB230
CsGy3G014450	Watermelon (97103) v1	cgybwmB217
CsGy3G014450	Watermelon (97103) v1	cgybwmB262
CsGy3G014450	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G014450	Silver-seed gourd	carcgybB0072
CsGy3G014450	Silver-seed gourd	carcgybB0605
CsGy3G014450	Silver-seed gourd	carcgybB0700
CsGy3G014450	Silver-seed gourd	carcgybB0828
CsGy3G014450	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G014450	Cucumber (Chinese Long) v3	cgybcucB153
CsGy3G014450	Watermelon (97103) v2	cgybwmbB196
CsGy3G014450	Watermelon (97103) v2	cgybwmbB222
CsGy3G014450	Wax gourd	cgybwgoB248
CsGy3G014450	Wax gourd	cgybwgoB257