CsGy3G014440 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G014440
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Mitochondrial transcription termination factor family protein
Location	Chr3 : 10673065 .. 10674159 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAACTTCTTTCGCACAATCCTTCTACTTAGATCTCCATCCTCACTCTTTTCTCACGGATTTTCCCAAAGTCCGTTCAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCCAAATCTGCTTCGTTGTCTTCTAATGCTGTTCAGCTCGAGAATAATGGGAAGGCTCTAATTGCGTTACTTGAGAATCAGGGATTCTCTCAATCACAAATCTCTGACCTTGCCATGAGGTTTCCTAGAATTCTTTCTATGAACCCCGAAAAAATTCTATTGCCCAAATTGTTGTTTCTTCAATCTAAAGGGCTTTCTTCCCCAGAGGTTGTCAAAATAGTATGTACAGTTCCTAATTTTTTTACAGGAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTATATTCAAGCCGTGCTTGGAACTGAGGAGAAGACTCTCAATGCCATAAAGCGCTTTGCGGGTGTTCTCGTGAAGGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCCGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAACTTTCTTGATAAACCCCATCCGATTCAAGGAGATAGTAGAGAGAGTTACGGAAATGGGATTCAACCGTCAACAATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAACAGATCTGTTCTGCTTTTAGAAGGCATCCATGGTGTATGATGGGTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCAAATCATCTTTCGCTGCTACAAGACCAATCTTAGTTTCACTTAGTATGAAGAAGAGGCTTTTGCCTAGAGGCCATGTTTATCAAGTTTTGGTGTCAAAGGGATTGATTAAAAACGCGAATTTTACTTCGTTGTTTTGCTCTTCTGAAAAGCGTTTCATAGAAAAATACATCAACCTTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAGCAGAAATTAGTGGAGTCTAGAAGATGA

mRNA sequence

ATGTCTAACTTCTTTCGCACAATCCTTCTACTTAGATCTCCATCCTCACTCTTTTCTCACGGATTTTCCCAAAGTCCGTTCAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCCAAATCTGCTTCGTTGTCTTCTAATGCTGTTCAGCTCGAGAATAATGGGAAGGCTCTAATTGCGTTACTTGAGAATCAGGGATTCTCTCAATCACAAATCTCTGACCTTGCCATGAGGTTTCCTAGAATTCTTTCTATGAACCCCGAAAAAATTCTATTGCCCAAATTGTTGTTTCTTCAATCTAAAGGGCTTTCTTCCCCAGAGGTTGTCAAAATAGTATGTACAGTTCCTAATTTTTTTACAGGAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTATATTCAAGCCGTGCTTGGAACTGAGGAGAAGACTCTCAATGCCATAAAGCGCTTTGCGGGTGTTCTCGTGAAGGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCCGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAACTTTCTTGATAAACCCCATCCGATTCAAGGAGATAGTAGAGAGAGTTACGGAAATGGGATTCAACCGTCAACAATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAACAGATCTGTTCTGCTTTTAGAAGGCATCCATGGTGTATGATGGGTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCAAATCATCTTTCGCTGCTACAAGACCAATCTTAGTTTCACTTAGTATGAAGAAGAGGCTTTTGCCTAGAGGCCATGTTTATCAAGTTTTGGTGTCAAAGGGATTGATTAAAAACGCGAATTTTACTTCGTTGTTTTGCTCTTCTGAAAAGCGTTTCATAGAAAAATACATCAACCTTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAGCAGAAATTAGTGGAGTCTAGAAGATGA

Coding sequence (CDS)

ATGTCTAACTTCTTTCGCACAATCCTTCTACTTAGATCTCCATCCTCACTCTTTTCTCACGGATTTTCCCAAAGTCCGTTCAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCCAAATCTGCTTCGTTGTCTTCTAATGCTGTTCAGCTCGAGAATAATGGGAAGGCTCTAATTGCGTTACTTGAGAATCAGGGATTCTCTCAATCACAAATCTCTGACCTTGCCATGAGGTTTCCTAGAATTCTTTCTATGAACCCCGAAAAAATTCTATTGCCCAAATTGTTGTTTCTTCAATCTAAAGGGCTTTCTTCCCCAGAGGTTGTCAAAATAGTATGTACAGTTCCTAATTTTTTTACAGGAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTATATTCAAGCCGTGCTTGGAACTGAGGAGAAGACTCTCAATGCCATAAAGCGCTTTGCGGGTGTTCTCGTGAAGGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCCGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAACTTTCTTGATAAACCCCATCCGATTCAAGGAGATAGTAGAGAGAGTTACGGAAATGGGATTCAACCGTCAACAATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAACAGATCTGTTCTGCTTTTAGAAGGCATCCATGGTGTATGATGGGTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCAAATCATCTTTCGCTGCTACAAGACCAATCTTAGTTTCACTTAGTATGAAGAAGAGGCTTTTGCCTAGAGGCCATGTTTATCAAGTTTTGGTGTCAAAGGGATTGATTAAAAACGCGAATTTTACTTCGTTGTTTTGCTCTTCTGAAAAGCGTTTCATAGAAAAATACATCAACCTTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAGCAGAAATTAGTGGAGTCTAGAAGATGA

Protein sequence

MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGKALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVPNFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVPDSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSMKKRLLPRGHVYQVLVSKGLIKNANFTSLFCSSEKRFIEKYINLHKEQIPGLLELYEQKLVESRR

Homology

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BLAST of CsGy3G014440 vs. NCBI nr
Match: XP_004134483.2 (PREDICTED: uncharacterized protein LOC101210242 [Cucumis sativus])

HSP 1 Score: 706.1 bits (1821), Expect = 6.4e-200
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60
           MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK
Sbjct: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60

Query: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120
           ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP
Sbjct: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120

Query: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180
           NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP
Sbjct: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300
           EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM
Sbjct: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300

Query: 301 KKRLLPRGHVYQVLVSKGLIKNANFTSLFCSSEKRFIEKYINLHKEQIPGLLELYEQKLV 360
           KKRLLPRGHVYQVLVSKGLIKNANFTSLFCSSEKRFIEKYINLHKEQIPGLLELYEQKLV
Sbjct: 301 KKRLLPRGHVYQVLVSKGLIKNANFTSLFCSSEKRFIEKYINLHKEQIPGLLELYEQKLV 360

Query: 361 ESRR 365
           ESRR
Sbjct: 361 ESRR 364

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BLAST of CsGy3G014440 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 563.5 bits (1451), Expect = 5.1e-157
Identity = 294/366 (80.33%), Postives = 324/366 (88.52%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60
           MS  FR ILLLRSPSS+FSHGFS+SP KSLR+LSTSSEIVSSPKSASL+SNAVQLENN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120
           A+I LL N GFSQSQISD+  R P+IL+ NPEKILLPKLLF QSKGLSSPE+ K+VCT P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180
              TGSLNKRII  FDYIQAVLG+EEKTL AIK+FAG+L +DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPR F+I+ IRFKEIVERVTEMGFN Q+LQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300
           EVYRKWGLSEE+IC AF+RHPWCMM SEDKINGAMDFFVNK+GC+SSF A RP L+SLS+
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLLPRGHVYQVLVSKGLI-KNANFTSLFCSSEKRFIEKYINLHK-EQIPGLLELYEQK 360
           KKRL PRG+VYQVL+ KGLI K AN      SSEKRFIEK+IN HK EQIPGLLELY+QK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LVESRR 365
           L++SRR
Sbjct: 361 LMDSRR 366

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BLAST of CsGy3G014440 vs. NCBI nr
Match: XP_016898974.1 (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 542.0 bits (1395), Expect = 1.6e-150
Identity = 282/365 (77.26%), Postives = 313/365 (85.75%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60
           MSN FR ILLLRSPSS FSHGFS+ P K LRYLSTSSEIVSSPKSASL+SNAVQL+NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120
           AL+ALL N GFS+SQISD+  R  +IL +NPEKIL PKLLF QSKGLSSPE+VK+VC++P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180
              TGSLNKRIIP FDY+QAV G+EEKTL  IKRFAG+L  DLRISVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240
           DSNI KYLQYQPR FLINP+RFKE VERV EMGFN QQLQF+VAVF LRAMTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300
           EVYRKWGLSEE+I  AFR+ P CM  SEDKING MDFFVNK+GC+SSFAA RPIL+SLS+
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRLLPRGHVYQVLVSKGLI-KNANFTSLFCSSEKRFIEKYINLHKEQIPGLLELYEQKL 360
           KKR+LPRG++YQVL+SKGLI K+ N    F S EKRFIEK+IN H EQI GLLELYE+KL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

Query: 361 VESRR 365
            + RR
Sbjct: 361 KDYRR 365

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BLAST of CsGy3G014440 vs. NCBI nr
Match: XP_004134480.2 (PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus])

HSP 1 Score: 539.7 bits (1389), Expect = 7.9e-150
Identity = 285/365 (78.08%), Postives = 315/365 (86.30%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60
           MS FFRT+LLLRSPSS+FSHGFS+SP KSL YLSTSSEIVSSP+SASL+SNAVQLENNGK
Sbjct: 1   MSIFFRTLLLLRSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGK 60

Query: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120
           A+IALL N  FSQSQIS LA R+P+ILS NPEK LLPKLLF QSKGLSSPE+ ++V + P
Sbjct: 61  AVIALLANHVFSQSQISYLANRYPQILSANPEKTLLPKLLFFQSKGLSSPEIFELVRSDP 120

Query: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180
                S+NKRIIPAFDYIQAVLG+EEKTL  IK+FAG+L KDLRISVGPNIEILKQIGVP
Sbjct: 121 WVLGASINKRIIPAFDYIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240
           DS+ILKY  YQPR FL N IRFKE VERV EMGFN QQ QF+VAVFALR+MTKSTWDKKV
Sbjct: 181 DSSILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300
           E+ RKWGLSEE I  AFRR+PWCM  SEDKINGAMDFFVNKMGC+SSFAA RP+L+S S+
Sbjct: 241 EILRKWGLSEEDIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSL 300

Query: 301 KKRLLPRGHVYQVLVSKGLI-KNANFTSLFCSSEKRFIEKYINLHKEQIPGLLELYEQKL 360
           KKR+LPRG+VYQVL+SKGLI KN N    F S EKRFIEKYIN  KEQIP LLELY+QKL
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKL 360

Query: 361 VESRR 365
           +ESRR
Sbjct: 361 MESRR 365

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BLAST of CsGy3G014440 vs. NCBI nr
Match: XP_016899006.1 (PREDICTED: uncharacterized protein LOC107990398 [Cucumis melo])

HSP 1 Score: 528.9 bits (1361), Expect = 1.4e-146
Identity = 281/365 (76.99%), Postives = 310/365 (84.93%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60
           MSN FR ILLLRSPS +F  GFSQSP KSLRYLSTSSEIVSSP+SA L+SNAVQL+ N K
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120
           A+IA L + GFS+SQIS    RFP+ILS NPEKILLPKLLF QSKGLSSPE+VK+VC+ P
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180
                SLNKRIIPAFDYIQAVLG+ EK L  IK FA +LV+DL ISVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPR FLIN IRFKEIVERVTEMGFN QQLQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300
           EVYRKWGLSEE+I   F+RHPWCM+ SEDKINGAMDFFVNK+GC+SSF A RP L+SLS+
Sbjct: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLLPRGHVYQVLVSKGLI-KNANFTSLFCSSEKRFIEKYINLHKEQIPGLLELYEQKL 360
           KKRL PRG+VYQVL++KGLI K+ N  S F   EKRFIEK IN HKEQIP LLELYE+KL
Sbjct: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360

Query: 361 VESRR 365
           ++  R
Sbjct: 361 MDYGR 364

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BLAST of CsGy3G014440 vs. TAIR10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 162.9 bits (411), Expect = 3.6e-40
Identity = 93/318 (29.25%), Postives = 179/318 (56.29%), Query Frame = 0


Query: 42  SPKSASLSSNAVQLENNGK--ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKL 101
           S +SA  +S  V+L ++ K  +++AL ++ GF+  QI+ +   FPR+LS++PE ++ PK 
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKX 128

Query: 102 LFLQSKGLSSPEVVKIVCTVPNFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVL 161
                                       +KR+IP +D ++++L  EE  +  +KR  G+ 
Sbjct: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXHKRLIPCYDSLKSILVEEESVVKCLKR--GIR 188

Query: 162 VKDLRIS--VGPNIEILKQIGVPDSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQ 221
              L+I+  V   + I +++GVPD +I   +Q  P TF     RF E++ RV   GF+ +
Sbjct: 189 CFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPK 248

Query: 222 QLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDF 281
           +  F+ A+ A    ++S  ++K ++++ +G S+E   +A  R P C+  S++KI   +++
Sbjct: 249 KAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEY 308

Query: 282 FVNKMGCKSSFAATRPILVSLSMKKRLLPRGHVYQVLVSKGLIK--NANFTSLFCSSEKR 341
            VN +G ++     RP+++SLSM+KR+ PR  V  +L+SKGL+K  + N+ ++       
Sbjct: 309 LVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSE 368

Query: 342 FIEKYINLHKEQIPGLLE 354
           F++K++  +++++P L++
Sbjct: 369 FMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of CsGy3G014440 vs. TAIR10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-39
Identity = 107/331 (32.33%), Postives = 166/331 (50.15%), Query Frame = 0


Query: 29  SLRYLSTSSEIVSSPKSASLSSNAVQLEN--NGKALIALLENQGFSQSQISDLAMRFPRI 88
           +L YL  S  +  SP SA+++S  + L++      ++ LL + GF+ +QIS L  + P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  LSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVPNFFTGSLNKRIIPAFDYIQAVLGTEE 148
           L  N E +LLPKL F  S G+S   + + + +                            
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASXXXXXXXXXXXXXXXXXXXXXXXXXXXX 190

Query: 149 KTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVPDSNILKYLQYQPRTFLINPIRFKEIV 208
                                      + + GVP+  I   L + P   +     F+ I 
Sbjct: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 ERVTEMGFNRQQLQFLVAVFALRAM-TKSTWDKKVEVYRKWGLSEEQICSAFRRHPWCMM 268
           ++  EMGFN Q+  F++A+ AL     KS WDK  EVY++WG SE+ I  AF++HP CMM
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 GSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSMKKRLLPRGHVYQVLVSKGLIK-NAN 328
            SE KIN  M++FVN+M       A  P+++  S++KR++PR  V +VLVS GL+K + +
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 FTSLFCSSEKRFIEKYINLHKEQIPGLLELY 356
            TSL    EK F+EK +  ++E++P L+ LY
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of CsGy3G014440 vs. TAIR10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-36
Identity = 87/289 (30.10%), Postives = 158/289 (54.67%), Query Frame = 0


Query: 60  KALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTV 119
           +++I +L++  FS +QI       PR++  N EKIL PKL F +  G +   + K V   
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 120 PNFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAG--VLVKDLRISVGPNIEILKQI 179
            +    SL K++IP  + +++++  + + L  I    G  +L +D  + + PNI  L+  
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 180 GVPDSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWD 239
           G+  S +   L+ QPR F ++  + +  V R  ++GF       + AV +L ++++ T+D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 240 KKVEVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVS 299
           +KV+++   G SE++I    RR P  +  SEDK+    +F++ +MG +    A RP ++S
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 300 LSMKKRLLPRGHVYQVLVSKGLI-----KNANFTSLFCSSEKRFIEKYI 342
            +++KR++PR  V Q+L  KGL+     K  N   +   +E+ F+EKY+
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYV 360

[Close]

BLAST of CsGy3G014440 vs. TAIR10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 113.6 bits (283), Expect = 2.5e-25
Identity = 88/355 (24.79%), Postives = 169/355 (47.61%), Query Frame = 0


Query: 42  SPKSASLSSNAVQLEN--NGKALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKL 101
           S K A   S  V  E+  N  ++++L  + GF+ SQIS +   +P +L  + +K L  KL
Sbjct: 65  SKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKL 124

Query: 102 LFLQSKGLSSPEVVKIVCTVPNFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVL 161
             LQS+G SS E+ +IV TVP        K I   +D ++ ++  +  T ++ +   G  
Sbjct: 125 QILQSRGASSSEITEIVSTVPRILG---KKSITVYYDAVKDIIVAD--TSSSYELPQGSQ 184

Query: 162 VKDLRISVGPNIEILKQIGVPDSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQL 221
              +R     N+  L+++G+P   +L  L  + +  +     F   +++V EMGF+    
Sbjct: 185 GNKIR-----NVSALRELGMPSRLLLPLLVSKSQP-VCGKENFDASLKKVVEMGFDPTTT 244

Query: 222 QFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEQICSAF---------------------- 281
           +F++A+  L  M++ T ++KV V+R  G + + +   F                      
Sbjct: 245 KFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFL 304

Query: 282 -------------RRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSMKKRL 341
                        +R+P C+  S + +    +F V KM    +     P +   SM+KR+
Sbjct: 305 DLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRI 364

Query: 342 LPRGHVYQVLVSKGLIKNAN----FTSLFCSSEKRFIEKYINLHKEQIPGLLELY 356
           +PR ++ + L+SKGL++  +     +S+   +++ F+++Y+  H E +P L+ ++
Sbjct: 365 IPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYVMKHNELVPTLMAIF 408

[Close]

BLAST of CsGy3G014440 vs. TAIR10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 102.4 bits (254), Expect = 5.8e-22
Identity = 82/343 (23.91%), Postives = 157/343 (45.77%), Query Frame = 0


Query: 44  KSASLSSNAVQLENNGK--ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLF 103
           K A   S  V  +N G   ++++LL + GF+ SQIS++   FPR+L ++ EK L PKL F
Sbjct: 71  KVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQF 130

Query: 104 LQSKGLSSPEVVKIVCTVPNFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVK 163
           LQS G SS E+ + V  VP        K +   +D+++ ++   +K+    K    +   
Sbjct: 131 LQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKVII-EADKSSKLEKLCHSLPEG 190

Query: 164 DLRISVGPNIEILKQIGVPDSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQF 223
             + +   N+ +L+++GVP   +L  L       +    +FKE +++  E+GF+     F
Sbjct: 191 SKQENKIRNLLVLREMGVP-QRLLFSLLISDAGDVCGKEKFKESLKKAVEIGFDPTTATF 250

Query: 224 LVAVFALRAMTKSTWDKKVEVYRKWGLSEEQICSAFRRHP-------------------- 283
           + A+  L  ++    + K    ++ GL+ + + + F++ P                    
Sbjct: 251 VKALNVLYGLSDKGIENKFNACKRLGLAVDDVWAMFKKWPNILTKXXXXXXXXXXXXXXX 310

Query: 284 ---------------WCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSMKKRLLP 343
                                   +    +F V +M       A+ P ++  S++KR +P
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVP 370

Query: 344 RGHVYQVLVSKGLIKN--ANFTSLFCSSEKRFIEKYINLHKEQ 348
           R +V +VL+SKGL+++     +S+  S+ + F+  Y+  H ++
Sbjct: 371 RCNVIKVLISKGLLESELPPISSVLTSTSEVFLYMYVRKHDDK 411

[Close]

BLAST of CsGy3G014440 vs. TrEMBL
Match: tr|A0A1S3AYM0|A0A1S3AYM0_CUCME (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 3.4e-157
Identity = 294/366 (80.33%), Postives = 324/366 (88.52%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60
           MS  FR ILLLRSPSS+FSHGFS+SP KSLR+LSTSSEIVSSPKSASL+SNAVQLENN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120
           A+I LL N GFSQSQISD+  R P+IL+ NPEKILLPKLLF QSKGLSSPE+ K+VCT P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180
              TGSLNKRII  FDYIQAVLG+EEKTL AIK+FAG+L +DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPR F+I+ IRFKEIVERVTEMGFN Q+LQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300
           EVYRKWGLSEE+IC AF+RHPWCMM SEDKINGAMDFFVNK+GC+SSF A RP L+SLS+
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLLPRGHVYQVLVSKGLI-KNANFTSLFCSSEKRFIEKYINLHK-EQIPGLLELYEQK 360
           KKRL PRG+VYQVL+ KGLI K AN      SSEKRFIEK+IN HK EQIPGLLELY+QK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LVESRR 365
           L++SRR
Sbjct: 361 LMDSRR 366

[Close]

BLAST of CsGy3G014440 vs. TrEMBL
Match: tr|A0A1S4DSL1|A0A1S4DSL1_CUCME (uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.1e-150
Identity = 282/365 (77.26%), Postives = 313/365 (85.75%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60
           MSN FR ILLLRSPSS FSHGFS+ P K LRYLSTSSEIVSSPKSASL+SNAVQL+NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120
           AL+ALL N GFS+SQISD+  R  +IL +NPEKIL PKLLF QSKGLSSPE+VK+VC++P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180
              TGSLNKRIIP FDY+QAV G+EEKTL  IKRFAG+L  DLRISVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240
           DSNI KYLQYQPR FLINP+RFKE VERV EMGFN QQLQF+VAVF LRAMTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300
           EVYRKWGLSEE+I  AFR+ P CM  SEDKING MDFFVNK+GC+SSFAA RPIL+SLS+
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRLLPRGHVYQVLVSKGLI-KNANFTSLFCSSEKRFIEKYINLHKEQIPGLLELYEQKL 360
           KKR+LPRG++YQVL+SKGLI K+ N    F S EKRFIEK+IN H EQI GLLELYE+KL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

Query: 361 VESRR 365
            + RR
Sbjct: 361 KDYRR 365

[Close]

BLAST of CsGy3G014440 vs. TrEMBL
Match: tr|A0A1S4DSP1|A0A1S4DSP1_CUCME (uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 9.2e-147
Identity = 281/365 (76.99%), Postives = 310/365 (84.93%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60
           MSN FR ILLLRSPS +F  GFSQSP KSLRYLSTSSEIVSSP+SA L+SNAVQL+ N K
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120
           A+IA L + GFS+SQIS    RFP+ILS NPEKILLPKLLF QSKGLSSPE+VK+VC+ P
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180
                SLNKRIIPAFDYIQAVLG+ EK L  IK FA +LV+DL ISVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPR FLIN IRFKEIVERVTEMGFN QQLQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300
           EVYRKWGLSEE+I   F+RHPWCM+ SEDKINGAMDFFVNK+GC+SSF A RP L+SLS+
Sbjct: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLLPRGHVYQVLVSKGLI-KNANFTSLFCSSEKRFIEKYINLHKEQIPGLLELYEQKL 360
           KKRL PRG+VYQVL++KGLI K+ N  S F   EKRFIEK IN HKEQIP LLELYE+KL
Sbjct: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360

Query: 361 VESRR 365
           ++  R
Sbjct: 361 MDYGR 364

[Close]

BLAST of CsGy3G014440 vs. TrEMBL
Match: tr|A0A1S3AYN7|A0A1S3AYN7_CUCME (uncharacterized protein LOC103484196 OS=Cucumis melo OX=3656 GN=LOC103484196 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.1e-142
Identity = 268/365 (73.42%), Postives = 302/365 (82.74%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60
           MSN FR ILLLRS S +FS GFS SP KSLRYLSTSSEIVSSP+SA L+SNAVQ +N  K
Sbjct: 1   MSNLFRRILLLRSASPVFSQGFSGSPLKSLRYLSTSSEIVSSPESAPLASNAVQHKNKRK 60

Query: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120
            +IALL + GFSQSQIS L  +FP++   NPEK LLPKLLF +SKGLSSPE+ K+VC+ P
Sbjct: 61  DVIALLADHGFSQSQISGLDKKFPKVFFSNPEKTLLPKLLFFRSKGLSSPEIAKLVCSFP 120

Query: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180
                SLNKRIIPAFDYIQAV G+EE +LNAIKRF+G+L+KDL ISVGPNIEILKQIGVP
Sbjct: 121 YVLNASLNKRIIPAFDYIQAVFGSEEDSLNAIKRFSGILMKDLGISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240
            SNI KYLQYQPR FL NPIRFKE VERVTEMGFN QQLQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 GSNIFKYLQYQPRMFLANPIRFKESVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300
           EVYRKWGLSEE+IC AFRR+P CM  SED IN  MDFF+N+MGC+SS+ A RP L   S+
Sbjct: 241 EVYRKWGLSEEEICLAFRRYPMCMALSEDNINDTMDFFINEMGCESSYVARRPTLFGCSL 300

Query: 301 KKRLLPRGHVYQVLVSKGLIKNANFTS-LFCSSEKRFIEKYINLHKEQIPGLLELYEQKL 360
           KKR+LPRG VYQVL+SKG IK     S +F  +EKRFIEK+IN HK QIPGLLELYE+KL
Sbjct: 301 KKRILPRGFVYQVLLSKGFIKELQKVSFMFLCTEKRFIEKFINPHKGQIPGLLELYEEKL 360

Query: 361 VESRR 365
           ++SRR
Sbjct: 361 MDSRR 365

[Close]

BLAST of CsGy3G014440 vs. TrEMBL
Match: tr|A0A1S4DSL0|A0A1S4DSL0_CUCME (uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 1.8e-142
Identity = 272/365 (74.52%), Postives = 309/365 (84.66%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60
           MS  FR ILLLRSPSS+FSHGFS+   KSLR+LSTSSEIVSSPKSASL+SNA        
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECSLKSLRFLSTSSEIVSSPKSASLASNA-------- 60

Query: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120
           AL+ALL N GFS+SQISD+A R  +ILS+NP+KIL PKLLF QSKGLSSPE+VK+VC++P
Sbjct: 61  ALVALLANHGFSESQISDIAKRQCKILSLNPQKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180
              TGSLNKRIIP FDY+QAVLG+EEKTL  IK+FAG+L+KDLRISVGPNIEILKQIGV 
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVLGSEEKTLATIKKFAGILIKDLRISVGPNIEILKQIGVQ 180

Query: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPR FLIN IRFKE+VERVTEMGFN  +LQF+VAVFALR+MTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRMFLINSIRFKEVVERVTEMGFNPDRLQFVVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300
           EVYRKWGLSEE+   AFRR+P CM  SEDKIN  MDFFVNK+G +SSF A RP L+S S+
Sbjct: 241 EVYRKWGLSEEEFSLAFRRNPLCMAFSEDKINAVMDFFVNKIGWESSFFARRPALISYSL 300

Query: 301 KKRLLPRGHVYQVLVSKGLIKNANFTSLFCS-SEKRFIEKYINLHKEQIPGLLELYEQKL 360
           KKR+LPRG+VYQVL+SKGLIK      LF   +EKRFIEK IN HKEQIPGLLELY+QK+
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKHKSHFLFFECTEKRFIEKIINPHKEQIPGLLELYKQKV 357

Query: 361 VESRR 365
           ++SRR
Sbjct: 361 MDSRR 357

The following BLAST results are available for this feature:

BLAST of CsGy3G014440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134483.2	6.4e-200	100.00	PREDICTED: uncharacterized protein LOC101210242 [Cucumis sativus]	[more]
XP_008439382.1	5.1e-157	80.33	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]	[more]
XP_016898974.1	1.6e-150	77.26	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]
XP_004134480.2	7.9e-150	78.08	PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus]	[more]
XP_016899006.1	1.4e-146	76.99	PREDICTED: uncharacterized protein LOC107990398 [Cucumis melo]	[more]

BLAST of CsGy3G014440 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G21150.1	3.6e-40	29.25	Mitochondrial transcription termination factor family protein	[more]
AT5G07900.1	1.4e-39	32.33	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.9e-36	30.10	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	2.5e-25	24.79	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	5.8e-22	23.91	Mitochondrial transcription termination factor family protein	[more]

BLAST of CsGy3G014440 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G014440 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYM0\|A0A1S3AYM0_CUCME	3.4e-157	80.33	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
tr\|A0A1S4DSL1\|A0A1S4DSL1_CUCME	1.1e-150	77.26	uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=...	[more]
tr\|A0A1S4DSP1\|A0A1S4DSP1_CUCME	9.2e-147	76.99	uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=...	[more]
tr\|A0A1S3AYN7\|A0A1S3AYN7_CUCME	1.1e-142	73.42	uncharacterized protein LOC103484196 OS=Cucumis melo OX=3656 GN=LOC103484196 PE=...	[more]
tr\|A0A1S4DSL0\|A0A1S4DSL0_CUCME	1.8e-142	74.52	uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR038538	MTERF_sf
IPR003690	MTERF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G014440.1	CsGy3G014440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 113..145 e-value: 15.0 score: 14.5 coord: 77..108 e-value: 0.0021 score: 27.3 coord: 254..285 e-value: 0.36 score: 19.9 coord: 149..180 e-value: 150.0 score: 10.3 coord: 185..215 e-value: 1600.0 score: 2.3 coord: 286..320 e-value: 500.0 score: 6.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 233..336 e-value: 2.5E-13 score: 49.6 coord: 64..223 e-value: 2.4E-20 score: 72.7
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	G3DSA:1.25.70.10		coord: 34..219 e-value: 8.4E-21 score: 76.3
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 39..360
None	No IPR available	PANTHER	PTHR13068:SF45	SUBFAMILY NOT NAMED	coord: 39..360

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G014440	MELO3C006651	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G014440	CSPI03G14290	Wild cucumber (PI 183967)	cgybcpiB110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G014440	Cucumber (Gy14) v2	cgybcgybB111
CsGy3G014440	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G014440	Cucurbita maxima (Rimu)	cgybcmaB345
CsGy3G014440	Cucurbita maxima (Rimu)	cgybcmaB351
CsGy3G014440	Cucurbita maxima (Rimu)	cgybcmaB427
CsGy3G014440	Cucurbita maxima (Rimu)	cgybcmaB454
CsGy3G014440	Cucurbita moschata (Rifu)	cgybcmoB323
CsGy3G014440	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G014440	Cucurbita moschata (Rifu)	cgybcmoB317
CsGy3G014440	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G014440	Cucurbita moschata (Rifu)	cgybcmoB421
CsGy3G014440	Cucurbita pepo (Zucchini)	cgybcpeB303
CsGy3G014440	Cucurbita pepo (Zucchini)	cgybcpeB309
CsGy3G014440	Cucurbita pepo (Zucchini)	cgybcpeB348
CsGy3G014440	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G014440	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G014440	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G014440	Bottle gourd (USVL1VR-Ls)	cgyblsiB136
CsGy3G014440	Bottle gourd (USVL1VR-Ls)	cgyblsiB184
CsGy3G014440	Melon (DHL92) v3.5.1	cgybmeB149
CsGy3G014440	Melon (DHL92) v3.6.1	cgybmedB148
CsGy3G014440	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G014440	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G014440	Watermelon (Charleston Gray)	cgybwcgB230
CsGy3G014440	Watermelon (97103) v1	cgybwmB217
CsGy3G014440	Watermelon (97103) v1	cgybwmB262
CsGy3G014440	Silver-seed gourd	carcgybB0072
CsGy3G014440	Silver-seed gourd	carcgybB0605
CsGy3G014440	Silver-seed gourd	carcgybB0700
CsGy3G014440	Silver-seed gourd	carcgybB0828
CsGy3G014440	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G014440	Cucumber (Chinese Long) v3	cgybcucB153
CsGy3G014440	Watermelon (97103) v2	cgybwmbB196
CsGy3G014440	Watermelon (97103) v2	cgybwmbB222
CsGy3G014440	Wax gourd	cgybwgoB248
CsGy3G014440	Wax gourd	cgybwgoB257