CsGy3G014400 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G014400
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Protein TIC 214
Location	Chr3 : 10656183 .. 10656933 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAAATGAAACTTCTAGAAAAAATGATAGTGAGAACATTTGGACAAATAAGATTCATGCTATCATTCGTAATAATAACAACGGTTTCTTCGATGGAGTTACAATTCCTTACAAGGCTAACGCAAGTGATCAAAACTCGATTGACCTAACAGAAATCAGTAAAAAAGTTCCTCGCTGGTCATACAAGTTAATCAAGGAGATAGAACAAGTGTACGACATAACCGATGGAGAGCTCGTGTTAGATTATCAAATTCGTTCAAGAAAATGCAAACGTGTAGTAATTTTAAGTGACCTTAACAAAATTAAGAAGATTTCTACTTCTACTTCTACTCCTACTTCTACTCCTACTTCTACTCCTGCTTCTTTTTTCATTTAGTTTAATTTGAAATTTATTATACAAGTGTGAGAACCTTGTGTGCTTGTCAACGTAGAGAACACTAAAACTATGGTCACTAAGCATCAACAGTAAAACTCAACATAACCTTAAGGTATTATTCGAACAGTATGCGAGTTGAGGTATGTTCCATGGCCACTAAACACTCATAAGAAAACTCAAGACAAACTTCAAGATTAACAATCCAAGTTGAGATATGCTTATTTTAACTTTTTTTTTTTTCTATCAATGCATATGAACCAACATCTTACTTTTTGTTTGTTAACCATTTATTTTCTGTTTCTTGGTTTGTTAGTTTTTTAAAATTGTCCTTGTTACATCATCATCTTCTAACCCTGATTTTCACATTTTCTAA

mRNA sequence

ATGCTAAATGAAACTTCTAGAAAAAATGATAGTGAGAACATTTGGACAAATAAGATTCATGCTATCATTCGTAATAATAACAACGGTTTCTTCGATGGAGTTACAATTCCTTACAAGGCTAACGCAAGTGATCAAAACTCGATTGACCTAACAGAAATCAGTAAAAAAGTTCCTCGCTGGTCATACAAGTTAATCAAGGAGATAGAACAAGTGTACGACATAACCGATGGAGAGCTCGTGTTAGATTATCAAATTCGTTCAAGAAAATGCAAACGTGTATTTTTTAAAATTGTCCTTGTTACATCATCATCTTCTAACCCTGATTTTCACATTTTCTAA

Coding sequence (CDS)

ATGCTAAATGAAACTTCTAGAAAAAATGATAGTGAGAACATTTGGACAAATAAGATTCATGCTATCATTCGTAATAATAACAACGGTTTCTTCGATGGAGTTACAATTCCTTACAAGGCTAACGCAAGTGATCAAAACTCGATTGACCTAACAGAAATCAGTAAAAAAGTTCCTCGCTGGTCATACAAGTTAATCAAGGAGATAGAACAAGTGTACGACATAACCGATGGAGAGCTCGTGTTAGATTATCAAATTCGTTCAAGAAAATGCAAACGTGTATTTTTTAAAATTGTCCTTGTTACATCATCATCTTCTAACCCTGATTTTCACATTTTCTAA

Protein sequence

MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRWSYKLIKEIEQVYDITDGELVLDYQIRSRKCKRVFFKIVLVTSSSSNPDFHIF

Homology

[Close]

BLAST of CsGy3G014400 vs. NCBI nr
Match: YP_247658.1 (hypothetical protein CsCp113 [Cucumis sativus] >CAJ00817.1 hypothetical protein CsCp113 (chloroplast) [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 2.8e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 60
           MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW
Sbjct: 482 MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 541

Query: 61  SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 94
           SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV
Sbjct: 542 SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 574

[Close]

BLAST of CsGy3G014400 vs. NCBI nr
Match: AAZ94706.1 (hypothetical protein (chloroplast) [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 2.8e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 60
           MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW
Sbjct: 482 MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 541

Query: 61  SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 94
           SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV
Sbjct: 542 SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 574

[Close]

BLAST of CsGy3G014400 vs. NCBI nr
Match: Q4VZL0.2 (RecName: Full=Protein TIC 214; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 214; Short=AtTIC214 >ABI97471.1 hypothetical chloroplast RF1 (chloroplast) [Cucumis sativus] >ABI98801.1 hypothetical chloroplast RF1 (chloroplast) [Cucumis sativus] >ARQ16135.1 hypothetical chloroplast RF1 (chloroplast) [Cucumis sativus] >ARQ16218.1 hypothetical chloroplast RF1 (chloroplast) [Cucumis sativus] >ARQ16301.1 hypothetical chloroplast RF1 (chloroplast) [Cucumis sativus] >ARQ16384.1 hypothetical chloroplast RF1 (chloroplast) [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 2.8e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 60
           MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW
Sbjct: 482 MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 541

Query: 61  SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 94
           SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV
Sbjct: 542 SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 574

[Close]

BLAST of CsGy3G014400 vs. NCBI nr
Match: AVE15390.1 (Ycf1 (chloroplast) [Cucumis sativus var. sativus])

HSP 1 Score: 190.7 bits (483), Expect = 2.8e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 60
           MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW
Sbjct: 482 MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 541

Query: 61  SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 94
           SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV
Sbjct: 542 SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 574

[Close]

BLAST of CsGy3G014400 vs. NCBI nr
Match: ALF03359.1 (hypothetical protein CsCp113 (chloroplast) [Cucumis sativus var. hardwickii] >ANF28434.1 hypothetical protein CsCp113 (chloroplast) [Cucumis sativus var. hardwickii])

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 60
           MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW
Sbjct: 482 MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 541

Query: 61  SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 94
           SY LIKEIEQVYDITDGELVLDYQIRSRKCKRV
Sbjct: 542 SYNLIKEIEQVYDITDGELVLDYQIRSRKCKRV 574

[Close]

BLAST of CsGy3G014400 vs. TAIR10
Match: ATCG01130.1 (Ycf1 protein)

HSP 1 Score: 53.5 bits (127), Expect = 9.6e-08
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 45  QNSIDLTEISKKVPRWSYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 94
           +N +D  EI+KKVPRWSYKLI E+E++    +  + ++  IRSRK KRV
Sbjct: 592 KNFMDFPEINKKVPRWSYKLISELEELEGENEENVPMEPGIRSRKAKRV 640

[Close]

BLAST of CsGy3G014400 vs. Swiss-Prot
Match: sp|Q4VZL0|TI214_CUCSA (Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 9.0e-48
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 60
           MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW
Sbjct: 482 MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 541

Query: 61  SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 94
           SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV
Sbjct: 542 SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 574

[Close]

BLAST of CsGy3G014400 vs. Swiss-Prot
Match: sp|Q14FA0|TI214_POPAL (Protein TIC 214 OS=Populus alba OX=43335 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.8e-11
Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNN---------------NGFFDGVTIPYKANASDQ 60
           ++NE S KN  E +W NKI+ I+  +N                  FD + +  K     +
Sbjct: 521 IINEISIKNYIEMLWINKIYLILLISNYQEFEPKMEDRIRILKFLFDAIIVDSKNKKIVK 580

Query: 61  NSIDL-TEISKKVPRWSYKLIKEIEQVYDITDGELVLDYQIRSRKCKRVFFKIVLVTSSS 113
            S ++  EISK++PRWSYKLI ++EQ     +     D++IRSRK KRV    V+ T + 
Sbjct: 581 KSTEIKKEISKQIPRWSYKLIDDLEQQEGENEENAAEDHEIRSRKAKRV----VIFTDNQ 640

[Close]

BLAST of CsGy3G014400 vs. Swiss-Prot
Match: sp|A4GYX4|TI214_POPTR (Protein TIC 214 OS=Populus trichocarpa OX=3694 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.8e-11
Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNN---------------NGFFDGVTIPYKANASDQ 60
           ++NE S KN  E +W NKI+ I+  +N                  FD + +  K     +
Sbjct: 521 IINEISIKNYIEMLWINKIYLILLISNYQEFEPKMEDRIRILKFLFDAIIVDSKNKKIVK 580

Query: 61  NSIDL-TEISKKVPRWSYKLIKEIEQVYDITDGELVLDYQIRSRKCKRVFFKIVLVTSSS 113
            S ++  EISK++PRWSYKLI ++EQ     +     D++IRSRK KRV    V+ T + 
Sbjct: 581 KSTEIKKEISKQIPRWSYKLIDDLEQQEGENEENAAEDHEIRSRKAKRV----VIFTDNQ 640

[Close]

BLAST of CsGy3G014400 vs. Swiss-Prot
Match: sp|Q3C1P6|TI214_NICSY (Protein TIC 214 OS=Nicotiana sylvestris OX=4096 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.3e-09
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 43  SDQNSIDLTEISKKVPRWSYKLIKEIEQVYDITDGELVLDYQIRSRKCKRVFFKIVLVTS 102
           S++ SI + EISKK+PRWS+KLI E+EQ        + LD+QIRSRK KRV    V+ T+
Sbjct: 639 SEKKSIGIKEISKKIPRWSHKLITELEQQSGDYQEGVPLDHQIRSRKAKRV----VIFTA 698

Query: 103 SSSNPD 109
           ++ N D
Sbjct: 699 NNQNND 700

[Close]

BLAST of CsGy3G014400 vs. Swiss-Prot
Match: sp|P12222|TI214_TOBAC (Protein TIC 214 OS=Nicotiana tabacum OX=4097 GN=TIC214 PE=3 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 6.3e-09
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 43  SDQNSIDLTEISKKVPRWSYKLIKEIEQVYDITDGELVLDYQIRSRKCKRVFFKIVLVTS 102
           S++ SI + EISKK+PRWS+KLI E+EQ        + LD+QIRSRK KRV    V+ T+
Sbjct: 639 SEKKSIGIKEISKKIPRWSHKLITELEQQSGDYQEGVPLDHQIRSRKAKRV----VIFTA 698

Query: 103 SSSNPD 109
           ++ N D
Sbjct: 699 NNQNND 700

[Close]

BLAST of CsGy3G014400 vs. TrEMBL
Match: tr|A0A1X9Q205|A0A1X9Q205_CUCSA (Protein TIC 214 OS=Cucumis sativus OX=3659 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 60
           MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW
Sbjct: 482 MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 541

Query: 61  SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 94
           SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV
Sbjct: 542 SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 574

[Close]

BLAST of CsGy3G014400 vs. TrEMBL
Match: tr|A0A218KG90|A0A218KG90_CUCSA (Protein TIC 214 OS=Cucumis sativus var. hardwickii OX=319220 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.0e-45
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 60
           MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW
Sbjct: 482 MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 541

Query: 61  SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 94
           SY LIKEIEQVYDITDGELVLDYQIRSRKCKRV
Sbjct: 542 SYNLIKEIEQVYDITDGELVLDYQIRSRKCKRV 574

[Close]

BLAST of CsGy3G014400 vs. TrEMBL
Match: tr|A0A286SB96|A0A286SB96_CUCSA (Protein TIC 214 OS=Cucumis sativus var. hardwickii OX=319220 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.0e-45
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 60
           MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW
Sbjct: 482 MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 541

Query: 61  SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 94
           SY LIKEIEQVYDITDGELVLDYQIRSRKCKRV
Sbjct: 542 SYNLIKEIEQVYDITDGELVLDYQIRSRKCKRV 574

[Close]

BLAST of CsGy3G014400 vs. TrEMBL
Match: tr|A0A1P8C7U3|A0A1P8C7U3_9ROSI (Protein TIC 214 OS=Cucumis x hytivus OX=442738 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.4e-40
Identity = 89/111 (80.18%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNNNGFFDGVTIPYKANASDQNSIDLTEISKKVPRW 60
           MLNETSRKNDSEN WTNKIHAI+RNNNN FFDGVTIPYKANASDQNSI+LTEISKKVPRW
Sbjct: 492 MLNETSRKNDSENSWTNKIHAIVRNNNNLFFDGVTIPYKANASDQNSIELTEISKKVPRW 551

Query: 61  SYKLIKEIEQVYDITDGELVLDYQIRSRKCKRVFF-----KIVLVTSSSSN 107
           SY LI+EI+QVYDITDG+LVLDYQIRSRK KRV       K +  TS+S+N
Sbjct: 552 SYNLIREIDQVYDITDGDLVLDYQIRSRKYKRVVILNNDVKKIKKTSTSTN 602

[Close]

BLAST of CsGy3G014400 vs. TrEMBL
Match: tr|A0A1P8LDD3|A0A1P8LDD3_CITLA (Protein TIC 214 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-21
Identity = 61/110 (55.45%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 1   MLNETSRKNDSENIWTNKIHAIIRNNN-----------------NGFFDGVTIPYKANAS 60
           MLNETSRKNDSEN+WTNKIHAI  N N                 N  FD V  PY A AS
Sbjct: 522 MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAVITPYNAKAS 581

Query: 61  DQNSIDLTEISKKVPRWSYKLIKEIEQVYDITDGELVLDYQIRSRKCKRV 94
            QNSI + EISKKVPRWS KLI E+EQ+    +  +  D++IRSRK KRV
Sbjct: 582 RQNSIGIREISKKVPRWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRV 631

The following BLAST results are available for this feature:

BLAST of CsGy3G014400 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_247658.1	2.8e-45	100.00	hypothetical protein CsCp113 [Cucumis sativus] >CAJ00817.1 hypothetical protein ...	[more]
AAZ94706.1	2.8e-45	100.00	hypothetical protein (chloroplast) [Cucumis sativus]	[more]
Q4VZL0.2	2.8e-45	100.00	RecName: Full=Protein TIC 214; AltName: Full=Translocon at the inner envelope me...	[more]
AVE15390.1	2.8e-45	100.00	Ycf1 (chloroplast) [Cucumis sativus var. sativus]	[more]
ALF03359.1	1.1e-44	98.92	hypothetical protein CsCp113 (chloroplast) [Cucumis sativus var. hardwickii] >AN...	[more]

BLAST of CsGy3G014400 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG01130.1	9.6e-08	51.02	Ycf1 protein	[more]

BLAST of CsGy3G014400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q4VZL0\|TI214_CUCSA	9.0e-48	100.00	Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2	[more]
sp\|Q14FA0\|TI214_POPAL	6.8e-11	34.38	Protein TIC 214 OS=Populus alba OX=43335 GN=TIC214 PE=3 SV=1	[more]
sp\|A4GYX4\|TI214_POPTR	6.8e-11	34.38	Protein TIC 214 OS=Populus trichocarpa OX=3694 GN=TIC214 PE=3 SV=1	[more]
sp\|Q3C1P6\|TI214_NICSY	6.3e-09	50.00	Protein TIC 214 OS=Nicotiana sylvestris OX=4096 GN=TIC214 PE=3 SV=1	[more]
sp\|P12222\|TI214_TOBAC	6.3e-09	50.00	Protein TIC 214 OS=Nicotiana tabacum OX=4097 GN=TIC214 PE=3 SV=2	[more]

BLAST of CsGy3G014400 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1X9Q205\|A0A1X9Q205_CUCSA	1.8e-45	100.00	Protein TIC 214 OS=Cucumis sativus OX=3659 GN=ycf1 PE=3 SV=1	[more]
tr\|A0A218KG90\|A0A218KG90_CUCSA	7.0e-45	98.92	Protein TIC 214 OS=Cucumis sativus var. hardwickii OX=319220 GN=ycf1 PE=3 SV=1	[more]
tr\|A0A286SB96\|A0A286SB96_CUCSA	7.0e-45	98.92	Protein TIC 214 OS=Cucumis sativus var. hardwickii OX=319220 GN=ycf1 PE=3 SV=1	[more]
tr\|A0A1P8C7U3\|A0A1P8C7U3_9ROSI	1.4e-40	80.18	Protein TIC 214 OS=Cucumis x hytivus OX=442738 GN=ycf1 PE=3 SV=1	[more]
tr\|A0A1P8LDD3\|A0A1P8LDD3_CITLA	1.8e-21	55.45	Protein TIC 214 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR008896	TIC214

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G014400.1	CsGy3G014400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 30..94 e-value: 6.6E-16 score: 57.3
None	No IPR available	PANTHER	PTHR33163	FAMILY NOT NAMED	coord: 28..97

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G014400	CSPI03G14240	Wild cucumber (PI 183967)	cgybcpiB110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G014400	Cucumber (Gy14) v2	cgybcgybB111
CsGy3G014400	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G014400	Cucurbita maxima (Rimu)	cgybcmaB345
CsGy3G014400	Cucurbita maxima (Rimu)	cgybcmaB351
CsGy3G014400	Cucurbita maxima (Rimu)	cgybcmaB427
CsGy3G014400	Cucurbita maxima (Rimu)	cgybcmaB454
CsGy3G014400	Cucurbita moschata (Rifu)	cgybcmoB323
CsGy3G014400	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G014400	Cucurbita moschata (Rifu)	cgybcmoB317
CsGy3G014400	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G014400	Cucurbita moschata (Rifu)	cgybcmoB421
CsGy3G014400	Cucurbita pepo (Zucchini)	cgybcpeB303
CsGy3G014400	Cucurbita pepo (Zucchini)	cgybcpeB309
CsGy3G014400	Cucurbita pepo (Zucchini)	cgybcpeB348
CsGy3G014400	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G014400	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G014400	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G014400	Bottle gourd (USVL1VR-Ls)	cgyblsiB136
CsGy3G014400	Bottle gourd (USVL1VR-Ls)	cgyblsiB184
CsGy3G014400	Melon (DHL92) v3.5.1	cgybmeB149
CsGy3G014400	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G014400	Melon (DHL92) v3.6.1	cgybmedB148
CsGy3G014400	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G014400	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G014400	Watermelon (Charleston Gray)	cgybwcgB230
CsGy3G014400	Watermelon (97103) v1	cgybwmB217
CsGy3G014400	Watermelon (97103) v1	cgybwmB262
CsGy3G014400	Silver-seed gourd	carcgybB0072
CsGy3G014400	Silver-seed gourd	carcgybB0605
CsGy3G014400	Silver-seed gourd	carcgybB0700
CsGy3G014400	Silver-seed gourd	carcgybB0828
CsGy3G014400	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G014400	Cucumber (Chinese Long) v3	cgybcucB153
CsGy3G014400	Watermelon (97103) v2	cgybwmbB196
CsGy3G014400	Watermelon (97103) v2	cgybwmbB222
CsGy3G014400	Wax gourd	cgybwgoB248
CsGy3G014400	Wax gourd	cgybwgoB257