CsGy3G014340 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G014340
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Mitochondrial transcription termination factor family protein
Location	Chr3 : 10615904 .. 10617259 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCTCTCCTATTTTCGCCGCCAGCCTCAGTGACCTCACCGGCCCCCATATTTTCTTCGTTCTGTTGTTGTTTCCCATTCCTCGGTTCCCTTACCATAAAACCATTTTCGACTATTTCCCTCCCCCGCCGCCCATTTTTATTCCTTTTCTCTCATAGCTTCATCCTCTCGTGAGGCATCTGTAGTTTCTCCCATTCTTCTTCTCAACAAGGTACCAACACCTCACTCTTCCTTCTCCTCCCATTTCTTACACTCATGTCTATCTTCTTTCGCACACTCCTTCTCCTTAGATCTCCATCCTCAGTCTTTTCTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCACATACTTATCCACCTCTTCTGAGATTGTATCATCTCCGGAATCTGCTTCGTTGGCTTCTAATGCTGTTCAGCTCGAGAATAATGGGAAGGCTGTAATTGCGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTTACCTTGCCAACAGGTATCCTCAAATTCTTTCTGCGAATCCCGAGAAAACCCTGTTGCCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTTTCGAATTAGTACGTTCAGATCCTTGGGTTTTGGGAGCAAGTATAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTACCATAAAACAGTTCGCGGGTATTCTCTCTAAGGATCTTCGGATTTCTGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAGTATTTTAAAATATTTTCCGTACCAGCCTAGAGTGTTCTTGACAAATTCCATCCGATTCAAGGAGACCGTAGAGAGAGTTGCGGAAATGGGATTCAACCCTCAACAAACGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAATTCTTAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAGGAATCCCTGGTGTATGAGAGTTTCTGAGGATAAGATTAATGGTGCGATGGATTTTTTTGTCAACAAAATGGGATGCGAATCATCTTTCGCTGCTAGAAGACCAGTTTTACTTTCATTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCGAAGGGTTTGATTAAGAAAAACGAAAATCTTGGTTTGTTCTTTGAGTCTCCTGAAAAGCGTTTCATAGAAAAATACATCAACCCTCGTAAGGAACAGATTCCTGAATTGTTGGAGTTGTATAAACAGAAATTAATGGAGTCTAGAAGATGA

mRNA sequence

ATGAAGCCTCTCCTATTTTCGCCGCCAGCCTCAGTGACCTCACCGGCCCCCATATTTTCTTCGTTCTGTTGTTGTTTCCCATTCCTCGGTTCCCTTACCATAAAACCATTTTCGACTATTTCCCTCCCCCGCCGCCCATTTTTATTCCTTTTCTCTCATAGCTTCATCCTCTCATCTCCATCCTCAGTCTTTTCTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCACATACTTATCCACCTCTTCTGAGATTGTATCATCTCCGGAATCTGCTTCGTTGGCTTCTAATGCTGTTCAGCTCGAGAATAATGGGAAGGCTGTAATTGCGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTTACCTTGCCAACAGGTATCCTCAAATTCTTTCTGCGAATCCCGAGAAAACCCTGTTGCCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTTTCGAATTAGTACGTTCAGATCCTTGGGTTTTGGGAGCAAGTATAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTACCATAAAACAGTTCGCGGGTATTCTCTCTAAGGATCTTCGGATTTCTGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAGTATTTTAAAATATTTTCCGTACCAGCCTAGAGTGTTCTTGACAAATTCCATCCGATTCAAGGAGACCGTAGAGAGAGTTGCGGAAATGGGATTCAACCCTCAACAAACGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAATTCTTAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAGGAATCCCTGGTGTATGAGAGTTTCTGAGGATAAGATTAATGGTGCGATGGATTTTTTTGTCAACAAAATGGGATGCGAATCATCTTTCGCTGCTAGAAGACCAGTTTTACTTTCATTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCGAAGGGTTTGATTAAGAAAAACGAAAATCTTGGTTTGTTCTTTGAGTCTCCTGAAAAGCGTTTCATAGAAAAATACATCAACCCTCGTAAGGAACAGATTCCTGAATTGTTGGAGTTGTATAAACAGAAATTAATGGAGTCTAGAAGATGA

Coding sequence (CDS)

ATGAAGCCTCTCCTATTTTCGCCGCCAGCCTCAGTGACCTCACCGGCCCCCATATTTTCTTCGTTCTGTTGTTGTTTCCCATTCCTCGGTTCCCTTACCATAAAACCATTTTCGACTATTTCCCTCCCCCGCCGCCCATTTTTATTCCTTTTCTCTCATAGCTTCATCCTCTCATCTCCATCCTCAGTCTTTTCTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCACATACTTATCCACCTCTTCTGAGATTGTATCATCTCCGGAATCTGCTTCGTTGGCTTCTAATGCTGTTCAGCTCGAGAATAATGGGAAGGCTGTAATTGCGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTTACCTTGCCAACAGGTATCCTCAAATTCTTTCTGCGAATCCCGAGAAAACCCTGTTGCCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTTTCGAATTAGTACGTTCAGATCCTTGGGTTTTGGGAGCAAGTATAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTACCATAAAACAGTTCGCGGGTATTCTCTCTAAGGATCTTCGGATTTCTGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAGTATTTTAAAATATTTTCCGTACCAGCCTAGAGTGTTCTTGACAAATTCCATCCGATTCAAGGAGACCGTAGAGAGAGTTGCGGAAATGGGATTCAACCCTCAACAAACGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAATTCTTAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAGGAATCCCTGGTGTATGAGAGTTTCTGAGGATAAGATTAATGGTGCGATGGATTTTTTTGTCAACAAAATGGGATGCGAATCATCTTTCGCTGCTAGAAGACCAGTTTTACTTTCATTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCGAAGGGTTTGATTAAGAAAAACGAAAATCTTGGTTTGTTCTTTGAGTCTCCTGAAAAGCGTTTCATAGAAAAATACATCAACCCTCGTAAGGAACAGATTCCTGAATTGTTGGAGTTGTATAAACAGAAATTAATGGAGTCTAGAAGATGA

Protein sequence

MKPLLFSPPASVTSPAPIFSSFCCCFPFLGSLTIKPFSTISLPRRPFLFLFSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAVIALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKGLSSPEIFELVRSDPWVLGASINKRIIPAFDYIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSSILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEILRKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKRILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMESRR

Homology

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BLAST of CsGy3G014340 vs. NCBI nr
Match: XP_004134480.2 (PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus])

HSP 1 Score: 601.7 bits (1550), Expect = 1.9e-168
Identity = 320/361 (88.64%), Postives = 323/361 (89.47%), Query Frame = 0


Query: 51  FSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAVIA 110
           F    +L SPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAVIA
Sbjct: 5   FRTLLLLRSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAVIA 64

Query: 111 LLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXXXXXX 170
           LLANH FS+SQISYLANRYPQILSANPEKTLLPKLLFFQSK                   
Sbjct: 65  LLANHVFSQSQISYLANRYPQILSANPEKTLLPKLLFFQSKGLSSPEIFELVRSDPWVLG 124

Query: 171 XXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSSI 230
                        IQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSSI
Sbjct: 125 ASINKRIIPAFDYIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSSI 184

Query: 231 LKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEILR 290
           LKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEILR
Sbjct: 185 LKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEILR 244

Query: 291 KWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKRI 350
           KWGLSEE+IRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKRI
Sbjct: 245 KWGLSEEDIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKRI 304

Query: 351 LPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMESR 410
           LPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMESR
Sbjct: 305 LPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMESR 364

Query: 411 R 412
           R
Sbjct: 365 R 365

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BLAST of CsGy3G014340 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 504.6 bits (1298), Expect = 3.2e-139
Identity = 270/364 (74.18%), Postives = 295/364 (81.04%), Query Frame = 0


Query: 49  FLFSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAV 108
           +LF    +L SPSSVFSHGFSESPLKSL +LSTSSEIVSSP+SASLASNAVQLENN KAV
Sbjct: 3   YLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAV 62

Query: 109 IALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXXXX 168
           I LLANHGFS+SQIS +  R PQIL+ANPEK LLPKLLFFQSK                 
Sbjct: 63  IELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYV 122

Query: 169 XXXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDS 228
                          IQAVLGSEEKTLA IKQFAGIL++DL+ISVGPNIEILKQIGVPDS
Sbjct: 123 LTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDS 182

Query: 229 SILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEI 288
           +ILKY  YQPRVF+ +SIRFKE VERV EMGFNPQ+ QF+VAVFALR+MTKSTWDKKVE+
Sbjct: 183 NILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEV 242

Query: 289 LRKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKK 348
            RKWGLSEEEI LAF+R+PWCM VSEDKINGAMDFFVNK+GCESSF ARRP L+S SLKK
Sbjct: 243 YRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKK 302

Query: 349 RILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRK-EQIPELLELYKQKLM 408
           R+ PRGYVYQVLL KGLIKK  N+ LF  S EKRFIEK+INP K EQIP LLELYKQKLM
Sbjct: 303 RLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLM 362

Query: 409 ESRR 412
           +SRR
Sbjct: 363 DSRR 366

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BLAST of CsGy3G014340 vs. NCBI nr
Match: XP_011651043.1 (PREDICTED: uncharacterized protein LOC101221507 isoform X1 [Cucumis sativus])

HSP 1 Score: 490.3 bits (1261), Expect = 6.2e-135
Identity = 264/362 (72.93%), Postives = 287/362 (79.28%), Query Frame = 0


Query: 50  LFSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAVI 109
           LF    +L SPSSVF+HGFSES L+SL YLSTSSEIVSSP+SASL SNAVQL N GKAVI
Sbjct: 4   LFRRILLLRSPSSVFAHGFSESSLRSLRYLSTSSEIVSSPKSASLPSNAVQLNNKGKAVI 63

Query: 110 ALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXXXXX 169
            LLANHGFSESQISYLA RYP ILS NPEK LLPKLLFFQSK                  
Sbjct: 64  DLLANHGFSESQISYLAERYPPILSFNPEKNLLPKLLFFQSKDHSSSEIFEILRSDPWVL 123

Query: 170 XXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSS 229
                         +QAVLGSEEKTLATIKQFA IL  DLR +VGPNIEILKQIGVPDS+
Sbjct: 124 SNSLNKRIIPAFDYLQAVLGSEEKTLATIKQFARILGLDLRNAVGPNIEILKQIGVPDSN 183

Query: 230 ILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEIL 289
           ILKY  YQPRVF+TNSI+FKETVERV EMGFN QQ QFV AVF LRSMTKSTWDKKVE  
Sbjct: 184 ILKYLQYQPRVFMTNSIQFKETVERVKEMGFNTQQWQFVDAVFCLRSMTKSTWDKKVEAY 243

Query: 290 RKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKR 349
           RKWGLSEEEIR AFR++P CM  SEDKINGAMDFF+NKM  ESSFAARRP+LL  SLKKR
Sbjct: 244 RKWGLSEEEIRSAFRKHPRCMTFSEDKINGAMDFFINKMEYESSFAARRPILLQLSLKKR 303

Query: 350 ILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMES 409
           +LPRG+VY+VLLSKGLIKK++NL    +SPEK FIEKYINP KEQIP LLELY++KLM+S
Sbjct: 304 LLPRGHVYEVLLSKGLIKKHQNLPFLLKSPEKHFIEKYINPHKEQIPGLLELYEEKLMDS 363

Query: 410 RR 412
           +R
Sbjct: 364 KR 365

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BLAST of CsGy3G014340 vs. NCBI nr
Match: XP_016898974.1 (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 489.6 bits (1259), Expect = 1.1e-134
Identity = 260/362 (71.82%), Postives = 285/362 (78.73%), Query Frame = 0


Query: 50  LFSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAVI 109
           LF    +L SPSS FSHGFSE PLK L YLSTSSEIVSSP+SASLASNAVQL+NN KA++
Sbjct: 4   LFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALV 63

Query: 110 ALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXXXXX 169
           ALLANHGFSESQIS +  R  +IL  NPEK L PKLLFFQSK                  
Sbjct: 64  ALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVL 123

Query: 170 XXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSS 229
                         +QAV GSEEKTL TIK+FAGIL+ DLRISVGPNIEILKQIGVPDS+
Sbjct: 124 TGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSN 183

Query: 230 ILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEIL 289
           I KY  YQPRVFL N +RFKE VERV EMGFNPQQ QFVVAVF LR+MTKSTWDKKVE+ 
Sbjct: 184 IFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVY 243

Query: 290 RKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKR 349
           RKWGLSEEEIR+AFR++P CM  SEDKING MDFFVNK+GCESSFAARRP+LLS SLKKR
Sbjct: 244 RKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKR 303

Query: 350 ILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMES 409
           ILPRGY+YQVLLSKGLIKK+ENL  FFESPEKRFIEK+INP  EQI  LLELY++KL + 
Sbjct: 304 ILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDY 363

Query: 410 RR 412
           RR
Sbjct: 364 RR 365

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BLAST of CsGy3G014340 vs. NCBI nr
Match: XP_016899006.1 (PREDICTED: uncharacterized protein LOC107990398 [Cucumis melo])

HSP 1 Score: 485.3 bits (1248), Expect = 2.0e-133
Identity = 264/362 (72.93%), Postives = 285/362 (78.73%), Query Frame = 0


Query: 50  LFSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAVI 109
           LF    +L SPS VF  GFS+SPLKSL YLSTSSEIVSSPESA LASNAVQL+ N KAVI
Sbjct: 4   LFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRKAVI 63

Query: 110 ALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXXXXX 169
           A LA++GFSESQIS    R+PQILSANPEK LLPKLLFFQSK                  
Sbjct: 64  AFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNPWCL 123

Query: 170 XXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSS 229
                         IQAVLGS EK LATIK FA IL +DL ISVGPNIEILKQIGVPDS+
Sbjct: 124 AASLNKRIIPAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVPDSN 183

Query: 230 ILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEIL 289
           ILKY  YQPRVFL NSIRFKE VERV EMGFNPQQ QFVVAVFALR+MTKSTWDKKVE+ 
Sbjct: 184 ILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVY 243

Query: 290 RKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKR 349
           RKWGLSEEEIRL F+R+PWCM VSEDKINGAMDFFVNK+GCESSF ARRP L+S SLKKR
Sbjct: 244 RKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKR 303

Query: 350 ILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMES 409
           + PRGYVYQVLL+KGLIKK++NL  FFE PEKRFIEK INP KEQIP LLELY++KLM+ 
Sbjct: 304 LNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKLMDY 363

Query: 410 RR 412
            R
Sbjct: 364 GR 364

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BLAST of CsGy3G014340 vs. TAIR10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 166.0 bits (419), Expect = 4.9e-41
Identity = 143/389 (36.76%), Postives = 206/389 (52.96%), Query Frame = 0


Query: 28  FLGSLTIKPFSTISLPR--RPFLFLFSHSFILSSPSSVFSHGFSESPLK---------SL 87
           FL  L  +   T  LP+  R  +F+FS     SSP +  +   S++P           +L
Sbjct: 16  FLTKLIPRGSFTTILPKHHRKPIFVFSLQTQFSSPVTTLT---SKNPKDDEQQQKLSFTL 75

Query: 88  TYLSTSSEIVSSPESASLASNAVQLEN--NGKAVIALLANHGFSESQISYLANRYPQILS 147
            YL  S  +  SP+SA++AS  + L++      V+ LL +HGF+ +QIS L  + P +L 
Sbjct: 76  NYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 135

Query: 148 ANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQAVLGSEEKT 207
           AN E  LLPKL FF S              XXXXXXXXXXXXXXXXXXX           
Sbjct: 136 ANAESVLLPKLSFFLSIGVSKSLLARTLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 195

Query: 208 LATIKQFAGILSKDLRISVGPNIEILKQIGVPDSSILKYFPYQPRVFLTNSIRFKETVER 267
                                    + + GVP+  I     + P   +  +  F+   ++
Sbjct: 196 XXXXXXXXXXXXXXXXXXXXXXXXXMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQ 255

Query: 268 VAEMGFNPQQTQFVVAVFALRSM-TKSTWDKKVEILRKWGLSEEEIRLAFRRNPWCMRVS 327
             EMGFNPQ++ FV+A+ AL     KS WDK  E+ ++WG SE++I  AF+++P CM +S
Sbjct: 256 AQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLS 315

Query: 328 EDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKRILPRGYVYQVLLSKGLIKKNENLG 387
           E KIN  M++FVN+M       A+ PV+L FSL+KRI+PR  V +VL+S GL+K++ +L 
Sbjct: 316 ERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLT 375

Query: 388 LFFESPEKRFIEKYINPRKEQIPELLELY 403
                 EK F+EK +   +E++PEL+ LY
Sbjct: 376 SLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of CsGy3G014340 vs. TAIR10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 149.4 bits (376), Expect = 4.7e-36
Identity = 94/305 (30.82%), Postives = 158/305 (51.80%), Query Frame = 0


Query: 106 KAVIALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXX 165
           ++VI +L ++ FS++QI      +P+++  N EK L PKL FF+                
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 166 XXXXXXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAG--ILSKDLRISVGPNIEILKQI 225
                             +++++  + + L  I    G  +LS+D  + + PNI  L+  
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 226 GVPDSSILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWD 285
           G+  S +      QPR+F  +  + +  V R  ++GF       V AV +L S+++ T+D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 286 KKVEILRKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLS 345
           +KV++    G SE+EI    RR+P  +R SEDK+    +F++ +MG E    A+RP +LS
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 346 FSLKKRILPRGYVYQVLLSKGLI----KKNENLGLFFESPEKRFIEKYINPRKEQI-PEL 404
           ++L+KR++PR  V Q+L  KGL+    KK +N+    E  E+ F+EKY+    ++I  EL
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEEL 371

[Close]

BLAST of CsGy3G014340 vs. TAIR10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 145.2 bits (365), Expect = 8.9e-35
Identity = 123/357 (34.45%), Postives = 194/357 (54.34%), Query Frame = 0


Query: 49  FLFSHSFILSSPSSVFSHGFSESP--LKSLTYLSTSSEIVSSPESASLASNAVQLENNGK 108
           FL      L S S V S    +    L+S T          S ESA   S  V+L ++ K
Sbjct: 28  FLVGRIRTLCSVSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKK 87

Query: 109 --AVIALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXX 168
             +V+AL  +HGF+  QI+ +   +P++LS +PE  + PK       XXXXXXXXXXXXX
Sbjct: 88  PDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKXXXXXXXXXXXXXXXXXXXX 147

Query: 169 XXXXXXXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIG 228
           XXXXXXXXX          ++++L  EE  +  +K+     S  +   V   + I +++G
Sbjct: 148 XXXXXXXXXHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELG 207

Query: 229 VPDSSILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDK 288
           VPD SI       P  F +   RF E + RV   GF+P++  FV A+ A    ++S  ++
Sbjct: 208 VPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMER 267

Query: 289 KVEILRKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSF 348
           K ++ + +G S+E+   A  R P C+ VS++KI   +++ VN +G ++     RPV+LS 
Sbjct: 268 KFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSL 327

Query: 349 SLKKRILPRGYVYQVLLSKGLIKKNE-NLGLFFESPEKRFIEKYINPRKEQIPELLE 401
           S++KRI PR  V  +LLSKGL+KK + N     +     F++K++   ++++P+L++
Sbjct: 328 SMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of CsGy3G014340 vs. TAIR10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-20
Identity = 129/407 (31.70%), Postives = 205/407 (50.37%), Query Frame = 0


Query: 51  FSHSFILSSPSSVFSHGFSESPLK----------SLTYLSTSSEIVSSPESASLASNAVQ 110
           FS S   +SP+S F    S + L           +++YL  S  + +    +     + +
Sbjct: 20  FSLSVQKASPTSNFFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFE 79

Query: 111 LENNGKAVIALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXX 170
            +NN  +V+ LL +HGF+ SQIS +   YPQ+L A+ EK+L PK       XXXXXXXXX
Sbjct: 80  DKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKXXXXXXXXXXXXXXXX 139

Query: 171 XXXXXXXXXXXXXXXXXXXXXXXIQAVL----GSEEKTLATIKQFAGILSKDLRISVGPN 230
           XXXXXXXXXXXXXXXXXXXXXXX +  L       EK   ++ Q  G L   +R     N
Sbjct: 140 XXXXXXXXXXXXXXXXXXXXXXXXKDTLLEKSSKNEKLCHSLPQ--GNLENKIR-----N 199

Query: 231 IEILKQIGVPDSSI--LKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFAL 290
           + +L+++G+P   +  L     QP   +    +F+ET+++V EMGF+P  ++FV A+  +
Sbjct: 200 VSVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVI 259

Query: 291 RSMTKSTWDKKVEILRKWGLSEEEIRLAFRRNPWCMRVSEDK------------------ 350
             M + T ++KV + +  G    ++  +F++ P  +RVSE K                  
Sbjct: 260 YKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEF 319

Query: 351 -----------------INGAMDFFVNKMGCESSFAARRPVLLSFSLKKRILPRGYVYQV 404
                            +    +F V KM          P +  +SL+KRI+PRG V + 
Sbjct: 320 AKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKA 379

[Close]

BLAST of CsGy3G014340 vs. TAIR10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 93.6 bits (231), Expect = 3.1e-19
Identity = 88/394 (22.34%), Postives = 172/394 (43.65%), Query Frame = 0


Query: 49  FLFSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLEN--NGK 108
           F+ S+SF  +  + V      +    +++YL  S  +  S + A   S  V  E+  N  
Sbjct: 28  FVLSNSFSSARAADVSIRDGRKGKNFTVSYLVDSLGL--SKKLAESISRKVSFEDKVNPD 87

Query: 109 AVIALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXX 168
           +V++L  ++GF++SQIS +   YP +L A+ +K L  KL   QS+               
Sbjct: 88  SVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSR---GASSSEITEIVS 147

Query: 169 XXXXXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVP 228
                            ++ ++ ++  +   + Q  G     +R     N+  L+++G+P
Sbjct: 148 TVPRILGKKSITVYYDAVKDIIVADTSSSYELPQ--GSQGNKIR-----NVSALRELGMP 207

Query: 229 DSSILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKV 288
              +L     + +  +     F  ++++V EMGF+P  T+FV+A+  L  M++ T ++KV
Sbjct: 208 SRLLLPLLVSKSQP-VCGKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKV 267

Query: 289 EILRKWGLSEEEIRLAFRRNPWCMRVSEDKI----------------------------- 348
            + R  G + +++   F++ P  ++VS+ KI                             
Sbjct: 268 VVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIE 327

Query: 349 ------NGAMDFFVNKMGCESSFAARRPVLLSFSLKKRILPRGYVYQVLLSKGLIKKNEN 403
                     +F V KM    +     P +  +S++KRI+PR  + + LLSKGL++K   
Sbjct: 328 YSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSE 387

[Close]

BLAST of CsGy3G014340 vs. TrEMBL
Match: tr|A0A1S3AYM0|A0A1S3AYM0_CUCME (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.1e-139
Identity = 270/364 (74.18%), Postives = 295/364 (81.04%), Query Frame = 0


Query: 49  FLFSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAV 108
           +LF    +L SPSSVFSHGFSESPLKSL +LSTSSEIVSSP+SASLASNAVQLENN KAV
Sbjct: 3   YLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAV 62

Query: 109 IALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXXXX 168
           I LLANHGFS+SQIS +  R PQIL+ANPEK LLPKLLFFQSK                 
Sbjct: 63  IELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYV 122

Query: 169 XXXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDS 228
                          IQAVLGSEEKTLA IKQFAGIL++DL+ISVGPNIEILKQIGVPDS
Sbjct: 123 LTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDS 182

Query: 229 SILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEI 288
           +ILKY  YQPRVF+ +SIRFKE VERV EMGFNPQ+ QF+VAVFALR+MTKSTWDKKVE+
Sbjct: 183 NILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEV 242

Query: 289 LRKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKK 348
            RKWGLSEEEI LAF+R+PWCM VSEDKINGAMDFFVNK+GCESSF ARRP L+S SLKK
Sbjct: 243 YRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKK 302

Query: 349 RILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRK-EQIPELLELYKQKLM 408
           R+ PRGYVYQVLL KGLIKK  N+ LF  S EKRFIEK+INP K EQIP LLELYKQKLM
Sbjct: 303 RLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLM 362

Query: 409 ESRR 412
           +SRR
Sbjct: 363 DSRR 366

[Close]

BLAST of CsGy3G014340 vs. TrEMBL
Match: tr|A0A1S4DSL1|A0A1S4DSL1_CUCME (uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 7.0e-135
Identity = 260/362 (71.82%), Postives = 285/362 (78.73%), Query Frame = 0


Query: 50  LFSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAVI 109
           LF    +L SPSS FSHGFSE PLK L YLSTSSEIVSSP+SASLASNAVQL+NN KA++
Sbjct: 4   LFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALV 63

Query: 110 ALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXXXXX 169
           ALLANHGFSESQIS +  R  +IL  NPEK L PKLLFFQSK                  
Sbjct: 64  ALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVL 123

Query: 170 XXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSS 229
                         +QAV GSEEKTL TIK+FAGIL+ DLRISVGPNIEILKQIGVPDS+
Sbjct: 124 TGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSN 183

Query: 230 ILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEIL 289
           I KY  YQPRVFL N +RFKE VERV EMGFNPQQ QFVVAVF LR+MTKSTWDKKVE+ 
Sbjct: 184 IFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVY 243

Query: 290 RKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKR 349
           RKWGLSEEEIR+AFR++P CM  SEDKING MDFFVNK+GCESSFAARRP+LLS SLKKR
Sbjct: 244 RKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKR 303

Query: 350 ILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMES 409
           ILPRGY+YQVLLSKGLIKK+ENL  FFESPEKRFIEK+INP  EQI  LLELY++KL + 
Sbjct: 304 ILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDY 363

Query: 410 RR 412
           RR
Sbjct: 364 RR 365

[Close]

BLAST of CsGy3G014340 vs. TrEMBL
Match: tr|A0A1S4DSP1|A0A1S4DSP1_CUCME (uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.3e-133
Identity = 264/362 (72.93%), Postives = 285/362 (78.73%), Query Frame = 0


Query: 50  LFSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAVI 109
           LF    +L SPS VF  GFS+SPLKSL YLSTSSEIVSSPESA LASNAVQL+ N KAVI
Sbjct: 4   LFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRKAVI 63

Query: 110 ALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXXXXX 169
           A LA++GFSESQIS    R+PQILSANPEK LLPKLLFFQSK                  
Sbjct: 64  AFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNPWCL 123

Query: 170 XXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSS 229
                         IQAVLGS EK LATIK FA IL +DL ISVGPNIEILKQIGVPDS+
Sbjct: 124 AASLNKRIIPAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVPDSN 183

Query: 230 ILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEIL 289
           ILKY  YQPRVFL NSIRFKE VERV EMGFNPQQ QFVVAVFALR+MTKSTWDKKVE+ 
Sbjct: 184 ILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVY 243

Query: 290 RKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKR 349
           RKWGLSEEEIRL F+R+PWCM VSEDKINGAMDFFVNK+GCESSF ARRP L+S SLKKR
Sbjct: 244 RKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKR 303

Query: 350 ILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMES 409
           + PRGYVYQVLL+KGLIKK++NL  FFE PEKRFIEK INP KEQIP LLELY++KLM+ 
Sbjct: 304 LNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKLMDY 363

Query: 410 RR 412
            R
Sbjct: 364 GR 364

[Close]

BLAST of CsGy3G014340 vs. TrEMBL
Match: tr|A0A1S4DSL0|A0A1S4DSL0_CUCME (uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.2e-128
Identity = 258/363 (71.07%), Postives = 281/363 (77.41%), Query Frame = 0


Query: 49  FLFSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAV 108
           +LF    +L SPSSVFSHGFSE  LKSL +LSTSSEIVSSP+SASLASNA        A+
Sbjct: 3   YLFRRILLLRSPSSVFSHGFSECSLKSLRFLSTSSEIVSSPKSASLASNA--------AL 62

Query: 109 IALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXXXX 168
           +ALLANHGFSESQIS +A R  +ILS NP+K L PKLLFFQSK                 
Sbjct: 63  VALLANHGFSESQISDIAKRQCKILSLNPQKILSPKLLFFQSKGLSSPEIVKLVCSIPCV 122

Query: 169 XXXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDS 228
                          +QAVLGSEEKTLATIK+FAGIL KDLRISVGPNIEILKQIGV DS
Sbjct: 123 LTGSLNKRIIPNFDYLQAVLGSEEKTLATIKKFAGILIKDLRISVGPNIEILKQIGVQDS 182

Query: 229 SILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEI 288
           +ILKY  YQPR+FL NSIRFKE VERV EMGFNP + QFVVAVFALRSMTKSTWDKKVE+
Sbjct: 183 NILKYLQYQPRMFLINSIRFKEVVERVTEMGFNPDRLQFVVAVFALRSMTKSTWDKKVEV 242

Query: 289 LRKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKK 348
            RKWGLSEEE  LAFRRNP CM  SEDKIN  MDFFVNK+G ESSF ARRP L+S+SLKK
Sbjct: 243 YRKWGLSEEEFSLAFRRNPLCMAFSEDKINAVMDFFVNKIGWESSFFARRPALISYSLKK 302

Query: 349 RILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLME 408
           RILPRGYVYQVLLSKGLIKK+++  LFFE  EKRFIEK INP KEQIP LLELYKQK+M+
Sbjct: 303 RILPRGYVYQVLLSKGLIKKHKSHFLFFECTEKRFIEKIINPHKEQIPGLLELYKQKVMD 357

Query: 409 SRR 412
           SRR
Sbjct: 363 SRR 357

[Close]

BLAST of CsGy3G014340 vs. TrEMBL
Match: tr|A0A1S4DSM8|A0A1S4DSM8_CUCME (uncharacterized protein LOC103483819 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 4.9e-128
Identity = 280/362 (77.35%), Postives = 305/362 (84.25%), Query Frame = 0


Query: 50  LFSHSFILSSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAVI 109
           LF    +L SPSSVFSHGFSE PLKSL +LSTSSEIVSSP+SASLASN VQ++NN KA  
Sbjct: 4   LFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRKAAF 63

Query: 110 ALLANHGFSESQISYLANRYPQILSANPEKTLLPKLLFFQSKXXXXXXXXXXXXXXXXXX 169
           +   NHGFSESQIS +  ++PQILSANPEK LLPKLL     XXXXXXXXXXXXXXXXXX
Sbjct: 64  SFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLXXXXXXXXXXXXXXXXXXXXXXX 123

Query: 170 XXXXXXXXXXXXXXIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSS 229
           XXXXXXXXXX    IQAV GS+EK LA IKQFAGIL  DL+I VGPNIEILKQIGVPDS+
Sbjct: 124 XXXXXXXXXXAFDYIQAVFGSKEKALAAIKQFAGILCFDLKILVGPNIEILKQIGVPDSN 183

Query: 230 ILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEIL 289
           I KY  Y+PRVFLTN IRFKE VER  EMGFNPQQ QF+VAVF LRSM KSTWDKKVE+ 
Sbjct: 184 IFKYLQYEPRVFLTNPIRFKEIVERAMEMGFNPQQLQFLVAVFILRSMAKSTWDKKVEVY 243

Query: 290 RKWGLSEEEIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKR 349
           RKWGLSEEEIRLAFR++P  M  SEDKIN AMDFFVNKMGCESS A  RP+LLS SLKKR
Sbjct: 244 RKWGLSEEEIRLAFRKHPSSMMRSEDKINAAMDFFVNKMGCESSLAVTRPLLLSLSLKKR 303

Query: 350 ILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMES 409
           ILPRGYVY+VLLSKGLI+K++NL LFFESPEKRFIEK INP +EQIP LLELY+QKLM+S
Sbjct: 304 ILPRGYVYKVLLSKGLIEKHKNLVLFFESPEKRFIEKIINPHEEQIPGLLELYEQKLMDS 363

Query: 410 RR 412
           RR
Sbjct: 364 RR 365

The following BLAST results are available for this feature:

BLAST of CsGy3G014340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134480.2	1.9e-168	88.64	PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus]	[more]
XP_008439382.1	3.2e-139	74.18	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]	[more]
XP_011651043.1	6.2e-135	72.93	PREDICTED: uncharacterized protein LOC101221507 isoform X1 [Cucumis sativus]	[more]
XP_016898974.1	1.1e-134	71.82	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]
XP_016899006.1	2.0e-133	72.93	PREDICTED: uncharacterized protein LOC107990398 [Cucumis melo]	[more]

BLAST of CsGy3G014340 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	4.9e-41	36.76	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	4.7e-36	30.82	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	8.9e-35	34.45	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.2e-20	31.70	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	3.1e-19	22.34	Mitochondrial transcription termination factor family protein	[more]

BLAST of CsGy3G014340 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G014340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYM0\|A0A1S3AYM0_CUCME	2.1e-139	74.18	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
tr\|A0A1S4DSL1\|A0A1S4DSL1_CUCME	7.0e-135	71.82	uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=...	[more]
tr\|A0A1S4DSP1\|A0A1S4DSP1_CUCME	1.3e-133	72.93	uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=...	[more]
tr\|A0A1S4DSL0\|A0A1S4DSL0_CUCME	2.2e-128	71.07	uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=...	[more]
tr\|A0A1S4DSM8\|A0A1S4DSM8_CUCME	4.9e-128	77.35	uncharacterized protein LOC103483819 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR038538	MTERF_sf
IPR003690	MTERF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G014340.1	CsGy3G014340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 300..331 e-value: 1.5 score: 17.8 coord: 231..261 e-value: 1400.0 score: 2.8 coord: 195..226 e-value: 190.0 score: 9.5 coord: 332..366 e-value: 9.0 score: 15.2 coord: 159..191 e-value: 2.4 score: 17.1 coord: 123..154 e-value: 0.0038 score: 26.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 110..272 e-value: 7.0E-21 score: 74.4 coord: 279..383 e-value: 1.0E-13 score: 50.9
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	G3DSA:1.25.70.10		coord: 73..253 e-value: 6.5E-22 score: 80.0
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 47..407
None	No IPR available	PANTHER	PTHR13068:SF45	SUBFAMILY NOT NAMED	coord: 47..407

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G014340	Cp4.1LG12g05540	Cucurbita pepo (Zucchini)	cgybcpeB309

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G014340	Watermelon (97103) v2	cgybwmbB196
CsGy3G014340	Watermelon (97103) v2	cgybwmbB222
CsGy3G014340	Wax gourd	cgybwgoB248
CsGy3G014340	Wax gourd	cgybwgoB257
CsGy3G014340	Cucumber (Gy14) v2	cgybcgybB111
CsGy3G014340	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G014340	Cucurbita maxima (Rimu)	cgybcmaB345
CsGy3G014340	Cucurbita maxima (Rimu)	cgybcmaB351
CsGy3G014340	Cucurbita maxima (Rimu)	cgybcmaB427
CsGy3G014340	Cucurbita maxima (Rimu)	cgybcmaB454
CsGy3G014340	Cucurbita moschata (Rifu)	cgybcmoB323
CsGy3G014340	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G014340	Cucurbita moschata (Rifu)	cgybcmoB317
CsGy3G014340	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G014340	Cucurbita moschata (Rifu)	cgybcmoB421
CsGy3G014340	Cucurbita pepo (Zucchini)	cgybcpeB303
CsGy3G014340	Cucurbita pepo (Zucchini)	cgybcpeB348
CsGy3G014340	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G014340	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G014340	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G014340	Bottle gourd (USVL1VR-Ls)	cgyblsiB136
CsGy3G014340	Bottle gourd (USVL1VR-Ls)	cgyblsiB184
CsGy3G014340	Melon (DHL92) v3.5.1	cgybmeB149
CsGy3G014340	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G014340	Melon (DHL92) v3.6.1	cgybmedB148
CsGy3G014340	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G014340	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G014340	Watermelon (Charleston Gray)	cgybwcgB230
CsGy3G014340	Watermelon (97103) v1	cgybwmB217
CsGy3G014340	Watermelon (97103) v1	cgybwmB262
CsGy3G014340	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G014340	Silver-seed gourd	carcgybB0605
CsGy3G014340	Silver-seed gourd	carcgybB0828
CsGy3G014340	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G014340	Cucumber (Chinese Long) v3	cgybcucB153