CsGy3G014330 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G014330
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Mitochondrial transcription termination factor family protein
Location	Chr3 : 10612639 .. 10613736 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAACTTCTTTCGCAGAATACTTCTACTTAGATCTCCATCGTCGGTTTTTTCTCACGGATTTTCCGAAATTCCGTTGAAATCTCTCAGATACTTTTCCACCTCTTCTGAGATTGTATCATCTCCTAAATCTGCTTCGTTGCCTTCTCATGCTGCTAAGCTCGAGAATAATCGGAAGGCTGTAATTGCGTTACTTGCGAATCATGGATTCTCTCAATCACAAATCTCTGACGTTGTCAAGAGGTATCCTGGAATTCTTTCTGCGAACCCCGAGAAAACCCTACTGCCTAAATTGTCGTTTTTTCAATCTAAAGGTTTTTCTTCCCCAGAGATTGTCAAATTCTTACGTTCAAATCCTTGGTCTTTAAGAGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGTTTGGAAGTGAGGAGAAGACTCTCGCTGTCATAAAACAGTTTGTGGGTATTCTCGTGAAGGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAGATATCTTCAGTACCAGCCTAGAGTGTTCTTGAAAAATCCCATCCTATTCAAGGAGACTGTAGAGAGAGTTGTGGAAATGGGATTTAACCCTCAACAATTGCAGTTTGTTGTAGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGCAGTTTATAGGAAATGGGGATTCTCTGAAGAAGAGATACGTTTATCTTTTAGAAAGCATCCGTGGTGTATGATGCGTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAAAATGGGATTCAATTCATCTGTCGCTGCTAGAAGACCAGTTTTACTTTCACTTAGTTTGAAGAAGAGAATTTTTCCTAGAGGCTATGTTTATCAAGTTTTGGTGTCAAAGGGTTTGATTAAGAAACGCCATAATCTTCTTTTGTTCTTTGAGTCTCCTGAAAACTGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTCTTATGAACAGAAATTAATGGATTCTAGAAGATGA

mRNA sequence

ATGTCTAACTTCTTTCGCAGAATACTTCTACTTAGATCTCCATCGTCGGTTTTTTCTCACGGATTTTCCGAAATTCCGTTGAAATCTCTCAGATACTTTTCCACCTCTTCTGAGATTGTATCATCTCCTAAATCTGCTTCGTTGCCTTCTCATGCTGCTAAGCTCGAGAATAATCGGAAGGCTGTAATTGCGTTACTTGCGAATCATGGATTCTCTCAATCACAAATCTCTGACGTTGTCAAGAGGTATCCTGGAATTCTTTCTGCGAACCCCGAGAAAACCCTACTGCCTAAATTGTCGTTTTTTCAATCTAAAGGTTTTTCTTCCCCAGAGATTGTCAAATTCTTACGTTCAAATCCTTGGTCTTTAAGAGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGTTTGGAAGTGAGGAGAAGACTCTCGCTGTCATAAAACAGTTTGTGGGTATTCTCGTGAAGGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAGATATCTTCAGTACCAGCCTAGAGTGTTCTTGAAAAATCCCATCCTATTCAAGGAGACTGTAGAGAGAGTTGTGGAAATGGGATTTAACCCTCAACAATTGCAGTTTGTTGTAGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGCAGTTTATAGGAAATGGGGATTCTCTGAAGAAGAGATACGTTTATCTTTTAGAAAGCATCCGTGGTGTATGATGCGTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAAAATGGGATTCAATTCATCTGTCGCTGCTAGAAGACCAGTTTTACTTTCACTTAGTTTGAAGAAGAGAATTTTTCCTAGAGGCTATGTTTATCAAGTTTTGGTGTCAAAGGGTTTGATTAAGAAACGCCATAATCTTCTTTTGTTCTTTGAGTCTCCTGAAAACTGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTCTTATGAACAGAAATTAATGGATTCTAGAAGATGA

Coding sequence (CDS)

ATGTCTAACTTCTTTCGCAGAATACTTCTACTTAGATCTCCATCGTCGGTTTTTTCTCACGGATTTTCCGAAATTCCGTTGAAATCTCTCAGATACTTTTCCACCTCTTCTGAGATTGTATCATCTCCTAAATCTGCTTCGTTGCCTTCTCATGCTGCTAAGCTCGAGAATAATCGGAAGGCTGTAATTGCGTTACTTGCGAATCATGGATTCTCTCAATCACAAATCTCTGACGTTGTCAAGAGGTATCCTGGAATTCTTTCTGCGAACCCCGAGAAAACCCTACTGCCTAAATTGTCGTTTTTTCAATCTAAAGGTTTTTCTTCCCCAGAGATTGTCAAATTCTTACGTTCAAATCCTTGGTCTTTAAGAGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGTTTGGAAGTGAGGAGAAGACTCTCGCTGTCATAAAACAGTTTGTGGGTATTCTCGTGAAGGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAGATATCTTCAGTACCAGCCTAGAGTGTTCTTGAAAAATCCCATCCTATTCAAGGAGACTGTAGAGAGAGTTGTGGAAATGGGATTTAACCCTCAACAATTGCAGTTTGTTGTAGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGCAGTTTATAGGAAATGGGGATTCTCTGAAGAAGAGATACGTTTATCTTTTAGAAAGCATCCGTGGTGTATGATGCGTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAAAATGGGATTCAATTCATCTGTCGCTGCTAGAAGACCAGTTTTACTTTCACTTAGTTTGAAGAAGAGAATTTTTCCTAGAGGCTATGTTTATCAAGTTTTGGTGTCAAAGGGTTTGATTAAGAAACGCCATAATCTTCTTTTGTTCTTTGAGTCTCCTGAAAACTGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTCTTATGAACAGAAATTAATGGATTCTAGAAGATGA

Protein sequence

MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRKAVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSFFQSKGFSSPEIVKFLRSNPWSLRASLNKRIIPAFDYIQAVFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVPDSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKVAVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSLKKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFIEKFINPHKEQIPGLLESYEQKLMDSRR

Homology

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BLAST of CsGy3G014330 vs. NCBI nr
Match: XP_011652762.1 (PREDICTED: uncharacterized protein LOC101208771 [Cucumis sativus])

HSP 1 Score: 613.6 bits (1581), Expect = 4.3e-172
Identity = 362/364 (99.45%), Postives = 362/364 (99.45%), Query Frame = 0


Query: 1   MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK 60
           MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK
Sbjct: 1   MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK 60

Query: 61  AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX 120
           AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180
           XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV 240
           DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV
Sbjct: 181 DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV 240

Query: 241 AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL 300
           AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL
Sbjct: 241 AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL 300

Query: 301 KKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFIEKFINPHKEQIPGLLESYEQKL 360
           KKRIFPRGYVYQVLVSKGLIKK HN LLFFESPENCFIEKFINPHKEQIPGLLESYEQKL
Sbjct: 301 KKRIFPRGYVYQVLVSKGLIKKHHNPLLFFESPENCFIEKFINPHKEQIPGLLESYEQKL 360

Query: 361 MDSR 365
           MDSR
Sbjct: 361 MDSR 364

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BLAST of CsGy3G014330 vs. NCBI nr
Match: XP_004134480.2 (PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 7.2e-135
Identity = 264/365 (72.33%), Postives = 280/365 (76.71%), Query Frame = 0


Query: 1   MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK 60
           MS FFR +LLLRSPSSVFSHGFSE PLKSL Y STSSEIVSSP+SASL S+A +LENN K
Sbjct: 1   MSIFFRTLLLLRSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGK 60

Query: 61  AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX 120
           AVIALLANH FSQSQIS +  RYP ILSANPEKTLLPKL                     
Sbjct: 61  AVIALLANHVFSQSQISYLANRYPQILSANPEKTLLPKLLFFQSKGLSSPEIFELVRSDP 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180
                                 GSEEKTLA IKQF GIL KDLRISVGPNIEILKQIGVP
Sbjct: 121 WVLGASINKRIIPAFDYIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV 240
           DS+IL+Y  YQPRVFL N I FKETVERV EMGFNPQQ QFVVAVFALRSMTKSTWDKKV
Sbjct: 181 DSSILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKV 240

Query: 241 AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL 300
            + RKWG SEE+IRL+FR++PWCM  SEDKING MDFFVNKMG  SS AARRPVLLS SL
Sbjct: 241 EILRKWGLSEEDIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSL 300

Query: 301 KKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFIEKFINPHKEQIPGLLESYEQKL 360
           KKRI PRGYVYQVL+SKGLIKK  NL LFFESPE  FIEK+INP KEQIP LLE Y+QKL
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKL 360

Query: 361 MDSRR 366
           M+SRR
Sbjct: 361 MESRR 365

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BLAST of CsGy3G014330 vs. NCBI nr
Match: XP_016899002.1 (PREDICTED: uncharacterized protein LOC103483819 isoform X2 [Cucumis melo])

HSP 1 Score: 485.7 bits (1249), Expect = 1.4e-133
Identity = 288/365 (78.90%), Postives = 312/365 (85.48%), Query Frame = 0


Query: 1   MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK 60
           MSN FRRILLLRSPSSVFSHGFSE PLKSLR+ STSSEIVSSPKSASL S+  +++NNRK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX 120
           A  +   NHGFS+SQISD+ K++P ILSANPEK LLPKL XXXXXXXXXXXXXXXXXXXX
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180
           XXXXXXXXXXXXX        FGS+EK LA IKQF GIL  DL+I VGPNIEILKQIGVP
Sbjct: 121 XXXXXXXXXXXXXAFDYIQAVFGSKEKALAAIKQFAGILCFDLKILVGPNIEILKQIGVP 180

Query: 181 DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV 240
           DSNI +YLQY+PRVFL NPI FKE VER +EMGFNPQQLQF+VAVF LRSM KSTWDKKV
Sbjct: 181 DSNIFKYLQYEPRVFLTNPIRFKEIVERAMEMGFNPQQLQFLVAVFILRSMAKSTWDKKV 240

Query: 241 AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL 300
            VYRKWG SEEEIRL+FRKHP  MMRSEDKIN  MDFFVNKMG  SS+A  RP+LLSLSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKHPSSMMRSEDKINAAMDFFVNKMGCESSLAVTRPLLLSLSL 300

Query: 301 KKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFIEKFINPHKEQIPGLLESYEQKL 360
           KKRI PRGYVY+VL+SKGLI+K  NL+LFFESPE  FIEK INPH+EQIPGLLE YEQKL
Sbjct: 301 KKRILPRGYVYKVLLSKGLIEKHKNLVLFFESPEKRFIEKIINPHEEQIPGLLELYEQKL 360

Query: 361 MDSRR 366
           MDSRR
Sbjct: 361 MDSRR 365

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BLAST of CsGy3G014330 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 484.6 bits (1246), Expect = 3.0e-133
Identity = 259/366 (70.77%), Postives = 283/366 (77.32%), Query Frame = 0


Query: 1   MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK 60
           MS  FRRILLLRSPSSVFSHGFSE PLKSLR+ STSSEIVSSPKSASL S+A +LENNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX 120
           AVI LLANHGFSQSQISD+ +R P IL+ANPEK LLPKL                     
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180
                                 GSEEKTLA IKQF GIL +DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV 240
           DSNIL+YLQYQPRVF+ + I FKE VERV EMGFNPQ+LQF+VAVFALR+MTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL 300
            VYRKWG SEEEI L+F++HPWCMM SEDKING MDFFVNK+G  SS  ARRP L+SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFIEKFINPHK-EQIPGLLESYEQK 360
           KKR+ PRGYVYQVL+ KGLIKK+ N+ LF  S E  FIEKFINPHK EQIPGLLE Y+QK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMDSRR 366
           LMDSRR
Sbjct: 361 LMDSRR 366

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BLAST of CsGy3G014330 vs. NCBI nr
Match: XP_016898974.1 (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132
Identity = 257/365 (70.41%), Postives = 275/365 (75.34%), Query Frame = 0


Query: 1   MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK 60
           MSN FRRILLLRSPSS FSHGFSE PLK LRY STSSEIVSSPKSASL S+A +L+NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX 120
           A++ALLANHGFS+SQISD+ KR   IL  NPEK L PKL                     
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180
                                FGSEEKTL  IK+F GIL  DLRISVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV 240
           DSNI +YLQYQPRVFL NP+ FKE VERV EMGFNPQQLQFVVAVF LR+MTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL 300
            VYRKWG SEEEIR++FRK P CM  SEDKINGVMDFFVNK+G  SS AARRP+LLSLSL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFIEKFINPHKEQIPGLLESYEQKL 360
           KKRI PRGY+YQVL+SKGLIKK  NL  FFESPE  FIEKFINPH EQI GLLE YE+KL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

Query: 361 MDSRR 366
            D RR
Sbjct: 361 KDYRR 365

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BLAST of CsGy3G014330 vs. TAIR10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 161.8 bits (408), Expect = 8.1e-40
Identity = 127/318 (39.94%), Postives = 175/318 (55.03%), Query Frame = 0


Query: 42  SPKSASLPSHAAKLENNRK--AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKL 101
           SP SA++ S    L++  +   V+ LL +HGF+ +QIS +VK+ P +L AN E  LLPKL
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 102 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGIL 161
           S                  XXXXXXXXXXXXXXXXXXXXXXX                  
Sbjct: 142 SFFLSIGVSKSLLARTLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201

Query: 162 VKDLRISVGPNIEILKQIGVPDSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQL 221
                         + + GVP+  I   L + P   ++    F+   ++  EMGFNPQ+ 
Sbjct: 202 XXXXXXXXXXXXXXMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 222 QFVVAVFALRSM-TKSTWDKKVAVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFF 281
            FV+A+ AL     KS WDK   VY++WG+SE++I  +F+KHP CMM SE KIN  M++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 282 VNKMGFNSSVAARRPVLLSLSLKKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFI 341
           VN+M       A+ PV+L  SL+KRI PR  V +VLVS GL+K+  +L       E  F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 342 EKFINPHKEQIPGLLESY 357
           EK +  ++E++P L+  Y
Sbjct: 382 EKLVIKYEEELPELMNLY 399

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BLAST of CsGy3G014330 vs. TAIR10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-34
Identity = 126/356 (35.39%), Postives = 198/356 (55.62%), Query Frame = 0


Query: 7   RILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVS---SPKSASLPSHAAKLENNRK--A 66
           RI  L S S V S    E     L  F+ S  + S   S +SA   S   KL +++K  +
Sbjct: 32  RIRTLCSVSQVKSENL-EKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDS 91

Query: 67  VIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXXX 126
           V+AL  +HGF+  QI+ V+K +P +LS +PE  + PK  XXXXXXXXXXXXXXXXXXXXX
Sbjct: 92  VLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKXXXXXXXXXXXXXXXXXXXXXXX 151

Query: 127 XXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVPD 186
           XXXXXX                 EE  +  +K+ +      +   V   + I +++GVPD
Sbjct: 152 XXXXXXHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPD 211

Query: 187 SNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKVA 246
            +I   +Q  P  F      F E + RV   GF+P++  FV A+ A    ++S  ++K  
Sbjct: 212 KSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFK 271

Query: 247 VYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSLK 306
           +++ +G+S+E+   +  + P C+  S++KI   +++ VN +G  +     RPV+LSLS++
Sbjct: 272 LFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSME 331

Query: 307 KRIFPRGYVYQVLVSKGLIKKRH-NLLLFFESPENCFIEKFINPHKEQIPGLLESY 357
           KRI PR  V  +L+SKGL+KK   N     +   + F++KF+  +++++P L++ +
Sbjct: 332 KRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]

BLAST of CsGy3G014330 vs. TAIR10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-30
Identity = 84/289 (29.07%), Postives = 140/289 (48.44%), Query Frame = 0


Query: 60  KAVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXX 119
           ++VI +L ++ FS +QI   ++ +P ++  N EK L PKL                    
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 120 XXXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVG--ILVKDLRISVGPNIEILKQI 179
                                    + + L VI    G  +L +D  + + PNI  L+  
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 180 GVPDSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWD 239
           G+  S +   L+ QPR+F  +    +  V R +++GF       V AV +L S+++ T+D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 240 KKVAVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLS 299
           +KV ++   GFSE+EI    R+ P  +  SEDK+    +F++ +MG      A+RP +LS
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 300 LSLKKRIFPRGYVYQVLVSKGLI----KKRHNLLLFFESPENCFIEKFI 343
            +L+KR+ PR  V Q+L  KGL+    KK+ N++   E  E  F+EK++
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYV 360

[Close]

BLAST of CsGy3G014330 vs. TAIR10
Match: AT1G61980.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 96.3 bits (238), Expect = 4.2e-20
Identity = 121/334 (36.23%), Postives = 176/334 (52.69%), Query Frame = 0


Query: 56  ENNRKAVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXX 115
           ++N  +V+ LL +HGF+ SQIS +V  YP +L A+ EK+L PK  XXXXXXXXXXXXXXX
Sbjct: 81  KDNPDSVLNLLRSHGFTDSQISTIVTDYPQLLVADAEKSLAPKXXXXXXXXXXXXXXXXX 140

Query: 116 XXXXXXXXXXXXXXXXXXXXXXXXXXF----GSEEKTLAVIKQFVGILVKDLRISVGPNI 175
           XXXXXXXXXXXXXXXXXXXXXXX           EK+     Q  G L   +R     N+
Sbjct: 141 XXXXXXXXXXXXXXXXXXXXXXXKETLLDKSSKSEKSCQPFPQ--GNLENKIR-----NL 200

Query: 176 EILKQIGVPDSNILRYL-QYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRS 235
            +L+++G+P   +   L      VF K    F+E++++VVEMGF+P   +FV A+  ++ 
Sbjct: 201 SVLRELGMPHKLLFPLLISCDVPVFGKEK--FEESLKKVVEMGFDPSTSKFVEALCVVQR 260

Query: 236 MTKSTWDKKVAVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVM--------------- 295
           ++    + KV  Y++ GF  E +   F++ P  +  SE KI   +               
Sbjct: 261 LSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKILNTIETFLGLGFSRDEFSV 320

Query: 296 --------------------DFFVNKMGFNSSVAARRPVLLSLSLKKRIFPRGYVYQVLV 349
                               +F V KM +        P +L  SL+KR  PRG V Q L+
Sbjct: 321 LIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVVQALI 380

[Close]

BLAST of CsGy3G014330 vs. TAIR10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 95.9 bits (237), Expect = 5.5e-20
Identity = 123/345 (35.65%), Postives = 180/345 (52.17%), Query Frame = 0


Query: 56  ENNRKAVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXX 115
           +NN  +V+ LL +HGF+ SQIS +++ YP +L A+ EK+L PK  XXXXXXXXXXXXXXX
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKXXXXXXXXXXXXXXXXX 140

Query: 116 XXXXXXXXXXXXXXXXXXXXXXXXXXF----GSEEKTLAVIKQFVGILVKDLRISVGPNI 175
           XXXXXXXXXXXXXXXXXXXXXXX           EK    + Q  G L   +R     N+
Sbjct: 141 XXXXXXXXXXXXXXXXXXXXXXXKDTLLEKSSKNEKLCHSLPQ--GNLENKIR-----NV 200

Query: 176 EILKQIGVPDSNILRYL--QYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALR 235
            +L+++G+P   +   L    QP   +     F+ET+++VVEMGF+P   +FV A+  + 
Sbjct: 201 SVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIY 260

Query: 236 SMTKSTWDKKVAVY--------------RKW---------------------GFSEEEIR 295
            M + T ++KV +Y              +KW                     GFS +E  
Sbjct: 261 KMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFA 320

Query: 296 LSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSLKKRIFPRGYVYQVL 355
              +  P C+  S + +    +F V KM +        P +   SL+KRI PRG V + L
Sbjct: 321 KMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKAL 380

Query: 356 VSKGLIKKR-HNLLLFFESPENCFIEKFINPH--KEQIPGLLESY 357
           +SKGL++    ++       +  F+ +++  H  K+ +  L+  Y
Sbjct: 381 MSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

[Close]

BLAST of CsGy3G014330 vs. TrEMBL
Match: tr|A0A1S4DSM8|A0A1S4DSM8_CUCME (uncharacterized protein LOC103483819 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 9.0e-134
Identity = 288/365 (78.90%), Postives = 312/365 (85.48%), Query Frame = 0


Query: 1   MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK 60
           MSN FRRILLLRSPSSVFSHGFSE PLKSLR+ STSSEIVSSPKSASL S+  +++NNRK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX 120
           A  +   NHGFS+SQISD+ K++P ILSANPEK LLPKL XXXXXXXXXXXXXXXXXXXX
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180
           XXXXXXXXXXXXX        FGS+EK LA IKQF GIL  DL+I VGPNIEILKQIGVP
Sbjct: 121 XXXXXXXXXXXXXAFDYIQAVFGSKEKALAAIKQFAGILCFDLKILVGPNIEILKQIGVP 180

Query: 181 DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV 240
           DSNI +YLQY+PRVFL NPI FKE VER +EMGFNPQQLQF+VAVF LRSM KSTWDKKV
Sbjct: 181 DSNIFKYLQYEPRVFLTNPIRFKEIVERAMEMGFNPQQLQFLVAVFILRSMAKSTWDKKV 240

Query: 241 AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL 300
            VYRKWG SEEEIRL+FRKHP  MMRSEDKIN  MDFFVNKMG  SS+A  RP+LLSLSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKHPSSMMRSEDKINAAMDFFVNKMGCESSLAVTRPLLLSLSL 300

Query: 301 KKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFIEKFINPHKEQIPGLLESYEQKL 360
           KKRI PRGYVY+VL+SKGLI+K  NL+LFFESPE  FIEK INPH+EQIPGLLE YEQKL
Sbjct: 301 KKRILPRGYVYKVLLSKGLIEKHKNLVLFFESPEKRFIEKIINPHEEQIPGLLELYEQKL 360

Query: 361 MDSRR 366
           MDSRR
Sbjct: 361 MDSRR 365

[Close]

BLAST of CsGy3G014330 vs. TrEMBL
Match: tr|A0A1S3AYM0|A0A1S3AYM0_CUCME (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.0e-133
Identity = 259/366 (70.77%), Postives = 283/366 (77.32%), Query Frame = 0


Query: 1   MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK 60
           MS  FRRILLLRSPSSVFSHGFSE PLKSLR+ STSSEIVSSPKSASL S+A +LENNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX 120
           AVI LLANHGFSQSQISD+ +R P IL+ANPEK LLPKL                     
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180
                                 GSEEKTLA IKQF GIL +DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV 240
           DSNIL+YLQYQPRVF+ + I FKE VERV EMGFNPQ+LQF+VAVFALR+MTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL 300
            VYRKWG SEEEI L+F++HPWCMM SEDKING MDFFVNK+G  SS  ARRP L+SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFIEKFINPHK-EQIPGLLESYEQK 360
           KKR+ PRGYVYQVL+ KGLIKK+ N+ LF  S E  FIEKFINPHK EQIPGLLE Y+QK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMDSRR 366
           LMDSRR
Sbjct: 361 LMDSRR 366

[Close]

BLAST of CsGy3G014330 vs. TrEMBL
Match: tr|A0A1S4DSL1|A0A1S4DSL1_CUCME (uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 7.6e-133
Identity = 257/365 (70.41%), Postives = 275/365 (75.34%), Query Frame = 0


Query: 1   MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK 60
           MSN FRRILLLRSPSS FSHGFSE PLK LRY STSSEIVSSPKSASL S+A +L+NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX 120
           A++ALLANHGFS+SQISD+ KR   IL  NPEK L PKL                     
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180
                                FGSEEKTL  IK+F GIL  DLRISVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV 240
           DSNI +YLQYQPRVFL NP+ FKE VERV EMGFNPQQLQFVVAVF LR+MTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL 300
            VYRKWG SEEEIR++FRK P CM  SEDKINGVMDFFVNK+G  SS AARRP+LLSLSL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFIEKFINPHKEQIPGLLESYEQKL 360
           KKRI PRGY+YQVL+SKGLIKK  NL  FFESPE  FIEKFINPH EQI GLLE YE+KL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

Query: 361 MDSRR 366
            D RR
Sbjct: 361 KDYRR 365

[Close]

BLAST of CsGy3G014330 vs. TrEMBL
Match: tr|A0A1S4DSP1|A0A1S4DSP1_CUCME (uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.1e-126
Identity = 250/365 (68.49%), Postives = 272/365 (74.52%), Query Frame = 0


Query: 1   MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK 60
           MSN FRRILLLRSPS VF  GFS+ PLKSLRY STSSEIVSSP+SA L S+A +L+ NRK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX 120
           AVIA LA++GFS+SQIS   KR+P ILSANPEK LLPKL                     
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180
                                 GS EK LA IK F  ILV+DL ISVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVP 180

Query: 181 DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV 240
           DSNIL+YLQYQPRVFL N I FKE VERV EMGFNPQQLQFVVAVFALR+MTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL 300
            VYRKWG SEEEIRL F++HPWCM+ SEDKING MDFFVNK+G  SS  ARRP L+SLSL
Sbjct: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFIEKFINPHKEQIPGLLESYEQKL 360
           KKR+ PRGYVYQVL++KGLIKK  NL+ FFE PE  FIEK INPHKEQIP LLE YE+KL
Sbjct: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360

Query: 361 MDSRR 366
           MD  R
Sbjct: 361 MDYGR 364

[Close]

BLAST of CsGy3G014330 vs. TrEMBL
Match: tr|A0A1S4DSK2|A0A1S4DSK2_CUCME (uncharacterized protein LOC103483822 OS=Cucumis melo OX=3656 GN=LOC103483822 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 6.4e-124
Identity = 246/362 (67.96%), Postives = 271/362 (74.86%), Query Frame = 0


Query: 1   MSNFFRRILLLRSPSSVFSHGFSEIPLKSLRYFSTSSEIVSSPKSASLPSHAAKLENNRK 60
           MS  FRRILLLRSPSSVFSHGFSE PLKSLR+ STSSE+VSSPKSASL S+A  L+NNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60

Query: 61  AVIALLANHGFSQSQISDVVKRYPGILSANPEKTLLPKLSXXXXXXXXXXXXXXXXXXXX 120
            VIALLANHGFSQSQISD+ KR P I SANPE++LLPKL                     
Sbjct: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKL--------------------- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180
                                 G+EEK +A IK+F GIL +DLRISVGPNIEILKQIGVP
Sbjct: 121 -------LFLQSKAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILRYLQYQPRVFLKNPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKV 240
           DSNI  YLQ QPR+F  + I FKE VERV EMGFNPQ+LQF+VAVFALRSMTKSTWDKKV
Sbjct: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKV 240

Query: 241 AVYRKWGFSEEEIRLSFRKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSL 300
            VYRKWG SEEEIRL+FRK+PW M  SEDKIN VMDFFVNK+G  S + ARRPVL++LSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300

Query: 301 KKRIFPRGYVYQVLVSKGLIKKRHNLLLFFESPENCFIEKFINPHKEQIPGLLESYEQKL 360
           KKRI PRGY+YQVL+SKGLIK   N    F   EN FIEKFINPHKEQIPGLL+ Y+QKL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIK---NFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKL 331

Query: 361 MD 363
           MD
Sbjct: 361 MD 331

The following BLAST results are available for this feature:

BLAST of CsGy3G014330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652762.1	4.3e-172	99.45	PREDICTED: uncharacterized protein LOC101208771 [Cucumis sativus]	[more]
XP_004134480.2	7.2e-135	72.33	PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus]	[more]
XP_016899002.1	1.4e-133	78.90	PREDICTED: uncharacterized protein LOC103483819 isoform X2 [Cucumis melo]	[more]
XP_008439382.1	3.0e-133	70.77	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]	[more]
XP_016898974.1	1.1e-132	70.41	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]

BLAST of CsGy3G014330 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	8.1e-40	39.94	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	3.9e-34	35.39	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.0e-30	29.07	Mitochondrial transcription termination factor family protein	[more]
AT1G61980.1	4.2e-20	36.23	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	5.5e-20	35.65	Mitochondrial transcription termination factor family protein	[more]

BLAST of CsGy3G014330 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G014330 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DSM8\|A0A1S4DSM8_CUCME	9.0e-134	78.90	uncharacterized protein LOC103483819 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3AYM0\|A0A1S3AYM0_CUCME	2.0e-133	70.77	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
tr\|A0A1S4DSL1\|A0A1S4DSL1_CUCME	7.6e-133	70.41	uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=...	[more]
tr\|A0A1S4DSP1\|A0A1S4DSP1_CUCME	1.1e-126	68.49	uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=...	[more]
tr\|A0A1S4DSK2\|A0A1S4DSK2_CUCME	6.4e-124	67.96	uncharacterized protein LOC103483822 OS=Cucumis melo OX=3656 GN=LOC103483822 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR038538	MTERF_sf
IPR003690	MTERF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G014330.1	CsGy3G014330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 254..285 e-value: 0.015 score: 24.5 coord: 113..145 e-value: 5.6 score: 15.9 coord: 185..215 e-value: 500.0 score: 6.2 coord: 286..320 e-value: 170.0 score: 9.9 coord: 149..180 e-value: 310.0 score: 7.8 coord: 77..108 e-value: 5.1E-5 score: 32.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 233..320 e-value: 1.2E-12 score: 47.4 coord: 64..223 e-value: 1.8E-21 score: 76.4
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	G3DSA:1.25.70.10		coord: 35..230 e-value: 1.0E-24 score: 89.2
None	No IPR available	PANTHER	PTHR13068:SF45	SUBFAMILY NOT NAMED	coord: 42..361
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..361

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G014330	CSPI03G14170	Wild cucumber (PI 183967)	cgybcpiB110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G014330	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G014330	Cucumber (Chinese Long) v3	cgybcucB153
CsGy3G014330	Watermelon (97103) v2	cgybwmbB196
CsGy3G014330	Watermelon (97103) v2	cgybwmbB222
CsGy3G014330	Wax gourd	cgybwgoB248
CsGy3G014330	Wax gourd	cgybwgoB257
CsGy3G014330	Cucumber (Gy14) v2	cgybcgybB111
CsGy3G014330	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G014330	Cucurbita maxima (Rimu)	cgybcmaB345
CsGy3G014330	Cucurbita maxima (Rimu)	cgybcmaB351
CsGy3G014330	Cucurbita maxima (Rimu)	cgybcmaB427
CsGy3G014330	Cucurbita maxima (Rimu)	cgybcmaB454
CsGy3G014330	Cucurbita moschata (Rifu)	cgybcmoB323
CsGy3G014330	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G014330	Cucurbita moschata (Rifu)	cgybcmoB317
CsGy3G014330	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G014330	Cucurbita moschata (Rifu)	cgybcmoB421
CsGy3G014330	Cucurbita pepo (Zucchini)	cgybcpeB303
CsGy3G014330	Cucurbita pepo (Zucchini)	cgybcpeB309
CsGy3G014330	Cucurbita pepo (Zucchini)	cgybcpeB348
CsGy3G014330	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G014330	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G014330	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G014330	Bottle gourd (USVL1VR-Ls)	cgyblsiB136
CsGy3G014330	Bottle gourd (USVL1VR-Ls)	cgyblsiB184
CsGy3G014330	Melon (DHL92) v3.5.1	cgybmeB149
CsGy3G014330	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G014330	Melon (DHL92) v3.6.1	cgybmedB148
CsGy3G014330	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G014330	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G014330	Watermelon (Charleston Gray)	cgybwcgB230
CsGy3G014330	Watermelon (97103) v1	cgybwmB217
CsGy3G014330	Watermelon (97103) v1	cgybwmB262
CsGy3G014330	Silver-seed gourd	carcgybB0605
CsGy3G014330	Silver-seed gourd	carcgybB0828