CsGy3G014260 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G014260
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Mitochondrial transcription termination factor family protein
Location	Chr3 : 10590654 .. 10591766 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAACTTGTTTCGCAGAATCATTCTACCTGGATCTCCATCCTCAGTCTTTACTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATTCTTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGGCTATAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAGTCTCTGACCTTATTAAGAAGGTCCCCCTAATTCTTTCTGCCAACCCCGAGATCCTATTTCCCATATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGCGATTACCAAATTAGTATGTTTTGCTCCTCAAATTTTAAAACGAAGTTTAAACCAAGAAATTATTCCATTCTTTGATTACATTCAAGCCGTGCTTGGAACTGTGGAGAAGACTGTCGCTACCATAAAACGCTTTCCGCGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAATTTGGAGTTCCGGATTCAAATATTTCAACTTATCTTCAGCGGCAGCCTAAAGTGTTCTCGACAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTATTGTTGCTGTTCATGCTCTGCGATCATTAACCAAATCTTCATGGGATAAGAAGCTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCTATTTAGCTTTTAGAAAGTATCCATGGTGTATGGCACTTTCTGAGGAAAAGATTAATGATACAATGGATTTTTTTATCAACAAAATGGGACGTGAATCATCTCTGGTTGCTAGAAGACCAAGTTTACTTTCATATAGTTTGAAGAAGAGGCTTTTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAGGAAAAGAATCTTGATTTGTTGTTTGAGCCTCCTGAAAAGCGTTTCATAGAAAAATACATCAACGCTCATAAGGAGCAGGTTCCTGGATTGTTGGAGTTGTATGAACAGAAGCTAATGAATTTAGAAGATGAACAGGTTCGATCTCCTTGA

mRNA sequence

ATGTATAACTTGTTTCGCAGAATCATTCTACCTGGATCTCCATCCTCAGTCTTTACTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATTCTTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGGCTATAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAGTCTCTGACCTTATTAAGAAGGTCCCCCTAATTCTTTCTGCCAACCCCGAGATCCTATTTCCCATATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGCGATTACCAAATTAGTATGTTTTGCTCCTCAAATTTTAAAACGAAGTTTAAACCAAGAAATTATTCCATTCTTTGATTACATTCAAGCCGTGCTTGGAACTGTGGAGAAGACTGTCGCTACCATAAAACGCTTTCCGCGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAATTTGGAGTTCCGGATTCAAATATTTCAACTTATCTTCAGCGGCAGCCTAAAGTGTTCTCGACAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTATTGTTGCTGTTCATGCTCTGCGATCATTAACCAAATCTTCATGGGATAAGAAGCTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCTATTTAGCTTTTAGAAAGTATCCATGGTGTATGGCACTTTCTGAGGAAAAGATTAATGATACAATGGATTTTTTTATCAACAAAATGGGACGTGAATCATCTCTGGTTGCTAGAAGACCAAGTTTACTTTCATATAGTTTGAAGAAGAGGCTTTTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAGGAAAAGAATCTTGATTTGTTGTTTGAGCCTCCTGAAAAGCGTTTCATAGAAAAATACATCAACGCTCATAAGGAGCAGGTTCCTGGATTGTTGGAGTTGTATGAACAGAAGCTAATGAATTTAGAAGATGAACAGGTTCGATCTCCTTGA

Coding sequence (CDS)

ATGTATAACTTGTTTCGCAGAATCATTCTACCTGGATCTCCATCCTCAGTCTTTACTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATTCTTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGGCTATAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAGTCTCTGACCTTATTAAGAAGGTCCCCCTAATTCTTTCTGCCAACCCCGAGATCCTATTTCCCATATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGCGATTACCAAATTAGTATGTTTTGCTCCTCAAATTTTAAAACGAAGTTTAAACCAAGAAATTATTCCATTCTTTGATTACATTCAAGCCGTGCTTGGAACTGTGGAGAAGACTGTCGCTACCATAAAACGCTTTCCGCGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAATTTGGAGTTCCGGATTCAAATATTTCAACTTATCTTCAGCGGCAGCCTAAAGTGTTCTCGACAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTATTGTTGCTGTTCATGCTCTGCGATCATTAACCAAATCTTCATGGGATAAGAAGCTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCTATTTAGCTTTTAGAAAGTATCCATGGTGTATGGCACTTTCTGAGGAAAAGATTAATGATACAATGGATTTTTTTATCAACAAAATGGGACGTGAATCATCTCTGGTTGCTAGAAGACCAAGTTTACTTTCATATAGTTTGAAGAAGAGGCTTTTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAGGAAAAGAATCTTGATTTGTTGTTTGAGCCTCCTGAAAAGCGTTTCATAGAAAAATACATCAACGCTCATAAGGAGCAGGTTCCTGGATTGTTGGAGTTGTATGAACAGAAGCTAATGAATTTAGAAGATGAACAGGTTCGATCTCCTTGA

Protein sequence

MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRKAIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPDSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLEVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLMNLEDEQVRSP

Homology

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BLAST of CsGy3G014260 vs. NCBI nr
Match: XP_011651039.1 (PREDICTED: uncharacterized protein LOC101221269 isoform X1 [Cucumis sativus])

HSP 1 Score: 714.1 bits (1842), Expect = 2.4e-202
Identity = 363/367 (98.91%), Postives = 367/367 (100.00%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           AIIAFFENHGFSESQ+SDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKK+E
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKIE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEEFYLAFRKYPWCMALSE+KINDTMDFFINKMGRESSLVARRPSLLSYSLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360

Query: 361 NLEDEQV 368
           NLEDEQ+
Sbjct: 361 NLEDEQI 367

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BLAST of CsGy3G014260 vs. NCBI nr
Match: XP_011651040.1 (PREDICTED: uncharacterized protein LOC101221269 isoform X2 [Cucumis sativus])

HSP 1 Score: 713.0 bits (1839), Expect = 5.3e-202
Identity = 363/366 (99.18%), Postives = 366/366 (100.00%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           AIIAFFENHGFSESQ+SDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKK+E
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKIE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEEFYLAFRKYPWCMALSE+KINDTMDFFINKMGRESSLVARRPSLLSYSLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360

Query: 361 NLEDEQ 367
           NLEDEQ
Sbjct: 361 NLEDEQ 366

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BLAST of CsGy3G014260 vs. NCBI nr
Match: XP_011651041.1 (PREDICTED: uncharacterized protein LOC101221269 isoform X3 [Cucumis sativus])

HSP 1 Score: 600.9 bits (1548), Expect = 2.9e-168
Identity = 305/361 (84.49%), Postives = 332/361 (91.97%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           AIIAFFENHGFSESQ+SDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNL  SVGPNIEILKQ GVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNL--SVGPNIEILKQIGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNIS+YLQ+QPK+F TSSIRFKE VERVTEMGFNPQ++QF+VAV  LR++TKS+ DKK+E
Sbjct: 181 SNISSYLQQQPKMFLTSSIRFKEAVERVTEMGFNPQQMQFVVAVFCLRAMTKSTLDKKVE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEE  LAF+K PWCM +SE+KIN  MD+F+NK+G +SS VARRP L  YSLK
Sbjct: 241 VYRKWGLSEEEIRLAFKKNPWCMMISEDKINGAMDYFVNKIGCQSSYVARRPGLTLYSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KRL PRGY+YQVLLSKGLIKK + L  LF   E RFI+K+IN HKEQ+PGLLELY+++LM
Sbjct: 301 KRLLPRGYIYQVLLSKGLIKKHEYLSSLFNSSENRFIKKFINPHKEQIPGLLELYKERLM 359

Query: 361 N 362
           +
Sbjct: 361 D 359

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BLAST of CsGy3G014260 vs. NCBI nr
Match: XP_011651042.1 (PREDICTED: uncharacterized protein LOC105434840 [Cucumis sativus])

HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164
Identity = 298/370 (80.54%), Postives = 332/370 (89.73%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRI++  SPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASL SNVVQLKNNRK
Sbjct: 1   MYNLFRRILILRSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLPSNVVQLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           A+IAFFENHGFSE Q+SD++KK+PLILSANPE LFPI LFFKSKGLSS AITKLVC APQ
Sbjct: 61  AVIAFFENHGFSELQISDIVKKIPLILSANPETLFPIFLFFKSKGLSSSAITKLVCSAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           +LKRSLNQEIIP FDYIQAVLGTVEKTV TIKRFPRILGW+LRISV PNIE+LKQFGVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVTTIKRFPRILGWDLRISVDPNIELLKQFGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNIST+LQR PK+FSTS IRFKEIVERVTEMGFNPQRL F+VAV A++S+TKS+W+KK+E
Sbjct: 181 SNISTFLQRHPKLFSTSPIRFKEIVERVTEMGFNPQRLLFVVAVSAMQSITKSTWNKKVE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEE  LAFRK P C+  SE+KIN  MDFF+NK+G E S VARR  L+S SLK
Sbjct: 241 VYRKWGLSEEELSLAFRKNPLCITFSEDKINGGMDFFVNKIGCEPSFVARRTLLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KRLFPRG+VYQVLLSKGLI+K + L LLFE PEKRFIEK IN HKEQ+PGLL++Y+QKLM
Sbjct: 301 KRLFPRGFVYQVLLSKGLIRKHEYLFLLFESPEKRFIEKIINPHKEQIPGLLKMYKQKLM 360

Query: 361 NLEDEQVRSP 371
           + +DEQ+  P
Sbjct: 361 DSKDEQLHIP 370

[Close]

BLAST of CsGy3G014260 vs. NCBI nr
Match: XP_008438829.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 580.5 bits (1495), Expect = 4.1e-162
Identity = 296/361 (81.99%), Postives = 323/361 (89.47%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SP SVF+HGFSESPLKSLRFLSTSSEI SSPKSASLASN+VQLKN RK
Sbjct: 1   MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           A++AFF NHGFSESQ+SDL+KKVPLILSANPE LFPILLFF+SKGLSSP ITKLVC APQ
Sbjct: 61  AVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           +L RSLNQEIIP FDY+QA+LGTVEKTVATIKRFP ILGWN RISVGPNIE+LKQ GVPD
Sbjct: 121 VLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNI  YLQ QP+VF  SSIRFKEIVERVTEMGFNPQRLQF+VAV ALRS+TKS+WDKK+E
Sbjct: 181 SNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEE  LAFRK+P CM LSE+ INDTMDFF+NKM  ESS VARRP+L ++SLK
Sbjct: 241 VYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KR+ PRG+VYQVLLSKGLIKK KN   LFE PEKRFIEK IN  KE++PGLLELYEQKLM
Sbjct: 301 KRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLM 360

Query: 361 N 362
           +
Sbjct: 361 D 361

[Close]

BLAST of CsGy3G014260 vs. TAIR10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 180.3 bits (456), Expect = 2.2e-45
Identity = 106/318 (33.33%), Postives = 166/318 (52.20%), Query Frame = 0


Query: 42  SPKSASLASNVVQLKNNRK--AIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPIL 101
           SP SA++AS  + L +  +   ++    +HGF+ +Q+S L+KK P++L AN E +L P L
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 102 LFFKSKGLSSPAITKLVCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRIL 161
            FF S G+S   + + +                                           
Sbjct: 142 SFFLSIGVSKSLLARTLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201

Query: 162 GWNLRISVGPNIEILKQFGVPDSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRL 221
                         + + GVP+  I   L   P+     +  F+ I ++  EMGFNPQ+ 
Sbjct: 202 XXXXXXXXXXXXXXMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 222 QFIVAVHALRSL-TKSSWDKKLEVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFF 281
            F++A+HAL     KS WDK  EVY++WG SE++   AF+K+P CM LSE KIN TM++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 282 INKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFI 341
           +N+M      +A+ P +L +SL+KR+ PR  V +VL+S GL+K++ +L  L  P EK F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 342 EKYINAHKEQVPGLLELY 356
           EK +  ++E++P L+ LY
Sbjct: 382 EKLVIKYEEELPELMNLY 399

[Close]

BLAST of CsGy3G014260 vs. TAIR10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 165.6 bits (418), Expect = 5.7e-41
Identity = 91/316 (28.80%), Postives = 176/316 (55.70%), Query Frame = 0


Query: 42  SPKSASLASNVVQLKNNRK--AIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPIL 101
           S +SA   S  V+L +++K  +++A F++HGF+  Q++ +IK  P +LS +PE ++ P  
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKX 128

Query: 102 LFFKSKGLSSPAITKLVCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRIL 161
                                       ++ +IP +D ++++L   E  V  +KR  R  
Sbjct: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXHKRLIPCYDSLKSILVEEESVVKCLKRGIRCF 188

Query: 162 GWNLRISVGPNIEILKQFGVPDSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRL 221
              +   V   + I ++ GVPD +I   +Q  P  F +   RF E++ RV   GF+P++ 
Sbjct: 189 SLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKA 248

Query: 222 QFIVAVHALRSLTKSSWDKKLEVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFI 281
            F+ A+ A    ++S+ ++K ++++ +G S+E+F  A  ++P C+ +S+EKI  T+++ +
Sbjct: 249 GFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLV 308

Query: 282 NKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKGLIKKEK-NLDLLFEPPEKRFI 341
           N +G ++  +  RP +LS S++KR+ PR  V  +LLSKGL+KKE  N   + +     F+
Sbjct: 309 NNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFM 368

Query: 342 EKYINAHKEQVPGLLE 354
           +K++  +++++P L++
Sbjct: 369 DKFVLKYQDEMPQLVQ 384

[Close]

BLAST of CsGy3G014260 vs. TAIR10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 149.4 bits (376), Expect = 4.2e-36
Identity = 99/335 (29.55%), Postives = 183/335 (54.63%), Query Frame = 0


Query: 43  PKSASLASNVVQLKN--NRKAIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPILL 102
           P + ++A     LK+    +++I   +++ FS++Q+   I+  P ++  N E IL P L 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FFKSKGLSSPAITKLVCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILG 162
           FFK  G +   + K V     ++  SL +++IP  + +++++    + +  I       G
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVIL---SRCG 172

Query: 163 WNL-----RISVGPNIEILKQFGVPDSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFN 222
           W L      + + PNI  L+  G+  S +++ L+RQP++F+ S  + +  V R  ++GF 
Sbjct: 173 WLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFT 232

Query: 223 PQRLQFIVAVHALRSLTKSSWDKKLEVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTM 282
                 + AV +L SL++ ++D+K++++   G SE+E     R+ P  +  SE+K+    
Sbjct: 233 LNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGF 292

Query: 283 DFFINKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKGLI----KKEKNLDLLFE 342
           +F++ +MG E   +A+RP +LSY+L+KR+ PR  V Q+L  KGL+    KK+KN+  + E
Sbjct: 293 EFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVE 352

Query: 343 PPEKRFIEKYINAHKEQVPGLLELYEQKLMNLEDE 366
             E+ F+EKY+    +++   L L   K + L DE
Sbjct: 353 MTEEAFLEKYVVRFGDEIAEEL-LVAYKCVCLVDE 383

[Close]

BLAST of CsGy3G014260 vs. TAIR10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-26
Identity = 84/339 (24.78%), Postives = 164/339 (48.38%), Query Frame = 0


Query: 56  KNNRKAIIAFFENHGFSESQVSDLIKKVPLILSAN-PEILFPILLFFKSKGLSSPAITKL 115
           K N  ++++ F ++GF++SQ+S +I   PL+L A+  + L   L   +S+G SS  IT++
Sbjct: 81  KVNPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEI 140

Query: 116 VCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILK 175
           V   P+IL +   + I  ++D ++ ++  V  T ++ +      G  +R     N+  L+
Sbjct: 141 VSTVPRILGK---KSITVYYDAVKDII--VADTSSSYELPQGSQGNKIR-----NVSALR 200

Query: 176 QFGVPDSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSS 235
           + G+P   +   L  + +        F   +++V EMGF+P   +F++A+  L  +++ +
Sbjct: 201 ELGMPSRLLLPLLVSKSQPVCGKE-NFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKT 260

Query: 236 WDKKLEVYRK--------W---------------------------GLSEEEFYLAFRKY 295
            ++K+ V+R         W                           G S  EF +  ++Y
Sbjct: 261 IEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRY 320

Query: 296 PWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKGLI 355
           P C+  S E +    +F + KM    + +   P +  YS++KR+ PR  + + LLSKGL+
Sbjct: 321 PPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLL 380

[Close]

BLAST of CsGy3G014260 vs. TAIR10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-23
Identity = 81/352 (23.01%), Postives = 163/352 (46.31%), Query Frame = 0


Query: 56  KNNRKAIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPILLFFKSKGLSSPAITKL 115
           K N  ++++   +HGF++SQ+S++I+  P +L  + E  L P L F +S G SS  +T+ 
Sbjct: 85  KGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTET 144

Query: 116 VCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILK 175
           V   P+IL +   + +  ++D+++ ++   +K+    K    +   + + +   N+ +L+
Sbjct: 145 VSAVPKILGKRKGKSLSRYYDFVKVII-EADKSSKLEKLCHSLPEGSKQENKIRNLLVLR 204

Query: 176 QFGVPDSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSS 235
           + GVP   + + L            +FKE +++  E+GF+P    F+ A++ L  L+   
Sbjct: 205 EMGVPQRLLFSLLISDAGDVCGKE-KFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKG 264

Query: 236 WDKKLEVYRKWGLSEEEFYLAFRKYPWCMA------------------------------ 295
            + K    ++ GL+ ++ +  F+K+P  +                               
Sbjct: 265 IENKFNACKRLGLAVDDVWAMFKKWPNILTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 324

Query: 296 -----LSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKGLI 355
                     +    +F + +M      VA  P +L YSL+KR  PR  V +VL+SKGL+
Sbjct: 325 XXXXXXXXXXMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGLL 384

Query: 356 KKE-KNLDLLFEPPEKRFIEKYINAH--KEQVPGLLELYEQKLMNLEDEQVR 369
           + E   +  +     + F+  Y+  H  K+ V  L+ ++    ++L D++ R
Sbjct: 385 ESELPPISSVLTSTSEVFLYMYVRKHDDKQLVAELMAIFTGDRVSLTDQKTR 434

[Close]

BLAST of CsGy3G014260 vs. Swiss-Prot
Match: sp|Q9FK23|MTEF8_ARATH (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-09
Identity = 55/297 (18.52%), Postives = 117/297 (39.39%), Query Frame = 0


Query: 47  SLASNVVQLKNNRKAIIAFFENHGFSESQVSDLIKKV---PLILSANPEILFPILLFFKS 106
           S+    + L  N+K  +     HG  + ++S ++ KV    L+   + E +  ++ F + 
Sbjct: 171 SVVDTSILLSFNQKVRLLLL--HGIPKEKISHVLNKVYLNKLLYQKSVEDIERLISFLEP 230

Query: 107 KGLSSPAITKLVCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKR---------- 166
            G        ++   P IL   L+ ++IP  D+I+ + G  +    T+ R          
Sbjct: 231 FGGIG-----IIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSV 290

Query: 167 ---------------------------FPRILGWNLRISVGPNIEILKQFGVPDSNISTY 226
                                      FP ++  +    + P IE LK+ G     +  +
Sbjct: 291 EHMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKF 350

Query: 227 LQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLEVYRKWG 286
           L + P + + S       +  + ++G+  +  +   A+ A+   +  +  + + +Y  +G
Sbjct: 351 LSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYG 410

Query: 287 LSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLKKRL 304
           LS E+      K+P  +  +   + + +++ I  MGRE   +   P+ L Y L  R+
Sbjct: 411 LSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRI 460

[Close]

BLAST of CsGy3G014260 vs. TrEMBL
Match: tr|A0A1S3AWZ8|A0A1S3AWZ8_CUCME (transcription termination factor MTEF1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103483815 PE=4 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 2.7e-162
Identity = 296/361 (81.99%), Postives = 323/361 (89.47%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SP SVF+HGFSESPLKSLRFLSTSSEI SSPKSASLASN+VQLKN RK
Sbjct: 1   MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           A++AFF NHGFSESQ+SDL+KKVPLILSANPE LFPILLFF+SKGLSSP ITKLVC APQ
Sbjct: 61  AVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           +L RSLNQEIIP FDY+QA+LGTVEKTVATIKRFP ILGWN RISVGPNIE+LKQ GVPD
Sbjct: 121 VLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNI  YLQ QP+VF  SSIRFKEIVERVTEMGFNPQRLQF+VAV ALRS+TKS+WDKK+E
Sbjct: 181 SNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEE  LAFRK+P CM LSE+ INDTMDFF+NKM  ESS VARRP+L ++SLK
Sbjct: 241 VYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KR+ PRG+VYQVLLSKGLIKK KN   LFE PEKRFIEK IN  KE++PGLLELYEQKLM
Sbjct: 301 KRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLM 360

Query: 361 N 362
           +
Sbjct: 361 D 361

[Close]

BLAST of CsGy3G014260 vs. TrEMBL
Match: tr|A0A1S3AXC4|A0A1S3AXC4_CUCME (uncharacterized protein LOC103483817 OS=Cucumis melo OX=3656 GN=LOC103483817 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 7.9e-154
Identity = 286/361 (79.22%), Postives = 310/361 (85.87%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SPSSV THGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
            +IAFFENHGFSESQ+SDL+KKVPLILSAN E LFP+L                      
Sbjct: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           +LKRSLNQEIIP FDYIQAVLGTVEKTVATIKRF  ILGWNLRISVGPNIEIL+QFGVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNIS YLQRQPK+FS SSI+FKE+VERV EMGFNPQ+LQF+VAV ALRS+TKSSWDKK+E
Sbjct: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEEF LAFR++P CM  SE+KIN  MDFF+N++G ESS VARRP L+S SLK
Sbjct: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KRLFPRGYVYQVLLSKGLIKK K L LLFE PE RFIEK+IN HKEQ+PGLLELY+QKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360

Query: 361 N 362
           +
Sbjct: 361 D 361

[Close]

BLAST of CsGy3G014260 vs. TrEMBL
Match: tr|A0A1S3AYM0|A0A1S3AYM0_CUCME (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 5.9e-141
Identity = 267/363 (73.55%), Postives = 306/363 (84.30%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           M  LFRRI+L  SPSSVF+HGFSESPLKSLRFLSTSSEIVSSPKSASLASN VQL+NNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPILLFFKSKGLSSPAITKLVCFAP 120
           A+I    NHGFS+SQ+SD+ ++ P IL+ANPE IL P LLFF+SKGLSSP I KLVC  P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 QILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVP 180
            +L  SLN+ II  FDYIQAVLG+ EKT+A IK+F  IL  +L+ISVGPNIEILKQ GVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKL 240
           DSNI  YLQ QP+VF  SSIRFKEIVERVTEMGFNPQRLQF+VAV ALR++TKS+WDKK+
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSL 300
           EVYRKWGLSEEE  LAF+++PWCM +SE+KIN  MDFF+NK+G ESS VARRP+L+S SL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHK-EQVPGLLELYEQK 360
           KKRL PRGYVYQVLL KGLIKK+ N+ L     EKRFIEK+IN HK EQ+PGLLELY+QK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMN 362
           LM+
Sbjct: 361 LMD 363

[Close]

BLAST of CsGy3G014260 vs. TrEMBL
Match: tr|A0A1S4DSL1|A0A1S4DSL1_CUCME (uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 1.6e-138
Identity = 259/360 (71.94%), Postives = 293/360 (81.39%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           M NLFRRI+L  SPSS F+HGFSE PLK LR+LSTSSEIVSSPKSASLASN VQLKNN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPILLFFKSKGLSSPAITKLVCFAP 120
           A++A   NHGFSESQ+SD+ K+   IL  NPE IL P LLFF+SKGLSSP I KLVC  P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 QILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVP 180
            +L  SLN+ IIP FDY+QAV G+ EKT+ TIKRF  IL W+LRISVGPNIEILKQ GVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKL 240
           DSNI  YLQ QP+VF  + +RFKE VERV EMGFNPQ+LQF+VAV  LR++TKS+WDKK+
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSL 300
           EVYRKWGLSEEE  +AFRK P CMA SE+KIN  MDFF+NK+G ESS  ARRP LLS SL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKL 360
           KKR+ PRGY+YQVLLSKGLIKK +NL   FE PEKRFIEK+IN H EQ+ GLLELYE+KL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

[Close]

BLAST of CsGy3G014260 vs. TrEMBL
Match: tr|A0A1S4DSP1|A0A1S4DSP1_CUCME (uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 6.1e-138
Identity = 264/362 (72.93%), Postives = 300/362 (82.87%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           M NLFRRI+L  SPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASN VQLK NRK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPILLFFKSKGLSSPAITKLVCFAP 120
           A+IAF  ++GFSESQ+S   K+ P ILSANPE IL P LLFF+SKGLSSP I KLVC  P
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 QILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVP 180
             L  SLN+ IIP FDYIQAVLG+ EK +ATIK F  IL  +L ISVGPNIEILKQ GVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKL 240
           DSNI  YLQ QP+VF  +SIRFKEIVERVTEMGFNPQ+LQF+VAV ALR++TKS+WDKK+
Sbjct: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSL 300
           EVYRKWGLSEEE  L F+++PWCM +SE+KIN  MDFF+NK+G ESS VARRP+L+S SL
Sbjct: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKL 360
           KKRL PRGYVYQVLL+KGLIKK +NL   FE PEKRFIEK IN HKEQ+P LLELYE+KL
Sbjct: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360

Query: 361 MN 362
           M+
Sbjct: 361 MD 361

The following BLAST results are available for this feature:

BLAST of CsGy3G014260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651039.1	2.4e-202	98.91	PREDICTED: uncharacterized protein LOC101221269 isoform X1 [Cucumis sativus]	[more]
XP_011651040.1	5.3e-202	99.18	PREDICTED: uncharacterized protein LOC101221269 isoform X2 [Cucumis sativus]	[more]
XP_011651041.1	2.9e-168	84.49	PREDICTED: uncharacterized protein LOC101221269 isoform X3 [Cucumis sativus]	[more]
XP_011651042.1	1.2e-164	80.54	PREDICTED: uncharacterized protein LOC105434840 [Cucumis sativus]	[more]
XP_008438829.1	4.1e-162	81.99	PREDICTED: transcription termination factor MTEF1, chloroplastic-like [Cucumis m...	[more]

BLAST of CsGy3G014260 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	2.2e-45	33.33	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	5.7e-41	28.80	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	4.2e-36	29.55	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	1.4e-26	24.78	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	1.8e-23	23.01	Mitochondrial transcription termination factor family protein	[more]

BLAST of CsGy3G014260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FK23\|MTEF8_ARATH	1.1e-09	18.52	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of CsGy3G014260 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AWZ8\|A0A1S3AWZ8_CUCME	2.7e-162	81.99	transcription termination factor MTEF1, chloroplastic-like OS=Cucumis melo OX=36...	[more]
tr\|A0A1S3AXC4\|A0A1S3AXC4_CUCME	7.9e-154	79.22	uncharacterized protein LOC103483817 OS=Cucumis melo OX=3656 GN=LOC103483817 PE=...	[more]
tr\|A0A1S3AYM0\|A0A1S3AYM0_CUCME	5.9e-141	73.55	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
tr\|A0A1S4DSL1\|A0A1S4DSL1_CUCME	1.6e-138	71.94	uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=...	[more]
tr\|A0A1S4DSP1\|A0A1S4DSP1_CUCME	6.1e-138	72.93	uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR038538	MTERF_sf
IPR003690	MTERF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G014260.1	CsGy3G014260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 253..284 e-value: 2.4 score: 17.1 coord: 112..144 e-value: 260.0 score: 8.5 coord: 148..179 e-value: 10.0 score: 15.1 coord: 285..319 e-value: 6.1 score: 15.8 coord: 77..107 e-value: 9.4 score: 15.2 coord: 184..214 e-value: 350.0 score: 7.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 232..333 e-value: 3.6E-16 score: 59.0 coord: 64..222 e-value: 3.7E-17 score: 62.2
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	G3DSA:1.25.70.10		coord: 32..203 e-value: 2.2E-23 score: 84.8
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 41..364
None	No IPR available	PANTHER	PTHR13068:SF45	SUBFAMILY NOT NAMED	coord: 41..364

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G014260	CSPI03G14140	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G014260	CmaCh08G012150	Cucurbita maxima (Rimu)	cgybcmaB454
CsGy3G014260	Lsi09G014120	Bottle gourd (USVL1VR-Ls)	cgyblsiB136
CsGy3G014260	CsaV3_3G014360	Cucumber (Chinese Long) v3	cgybcucB117

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsGy3G014260	CsGy6G014740	Cucumber (Gy14) v2	cgybcgybB111

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G014260	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G014260	Cucurbita maxima (Rimu)	cgybcmaB345
CsGy3G014260	Cucurbita maxima (Rimu)	cgybcmaB351
CsGy3G014260	Cucurbita maxima (Rimu)	cgybcmaB427
CsGy3G014260	Cucurbita moschata (Rifu)	cgybcmoB323
CsGy3G014260	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G014260	Cucurbita moschata (Rifu)	cgybcmoB317
CsGy3G014260	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G014260	Cucurbita moschata (Rifu)	cgybcmoB421
CsGy3G014260	Cucurbita pepo (Zucchini)	cgybcpeB303
CsGy3G014260	Cucurbita pepo (Zucchini)	cgybcpeB309
CsGy3G014260	Cucurbita pepo (Zucchini)	cgybcpeB348
CsGy3G014260	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G014260	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G014260	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G014260	Bottle gourd (USVL1VR-Ls)	cgyblsiB184
CsGy3G014260	Melon (DHL92) v3.5.1	cgybmeB149
CsGy3G014260	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G014260	Melon (DHL92) v3.6.1	cgybmedB148
CsGy3G014260	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G014260	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G014260	Watermelon (Charleston Gray)	cgybwcgB230
CsGy3G014260	Watermelon (97103) v1	cgybwmB217
CsGy3G014260	Watermelon (97103) v1	cgybwmB262
CsGy3G014260	Silver-seed gourd	carcgybB0605
CsGy3G014260	Silver-seed gourd	carcgybB0828
CsGy3G014260	Cucumber (Chinese Long) v3	cgybcucB153
CsGy3G014260	Watermelon (97103) v2	cgybwmbB196
CsGy3G014260	Watermelon (97103) v2	cgybwmbB222
CsGy3G014260	Wax gourd	cgybwgoB248
CsGy3G014260	Wax gourd	cgybwgoB257