CsGy3G013780 (gene) Cucumber (Gy14) v2

NameCsGy3G013780
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr3 : 10237681 .. 10238528 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTAAACAACACTTATATTCGTGATTATGACTCATTAAGATTATGACAATTTTGTCTATGAATTAGTAAACTTAATTTAACATTTGTTAAATGTTGAAAAATTAACTAGTATGTTAAATATATATAAATATTTTTTATAATAGTATCCAATCTTTGTTGGTAAATATAAAACAAAATATTTATAAATATAGCAACATTTCAATTTATGATCAAGTTGAATGATACTCACTTGATCAAATTTTATCTTTTAAAGTATTCACCGTTAAACTTTGAAAAGTGATAAAGTAAAAACTTTGAAAAGTGATAAAGTAATAAGATGGAATTATAAGTTAAATAGAATTTAAAACTTGTAAGTTTGAGTTTGTGATTAAATGTGTAGAAACAATGAAACATTTACTTTTTTGTTTTAATTTCAAAACTCTACCCGTGCCGCCGATGAACATGATGATAATCAGTTTCATCCATTCTACAAATTTCATAATCTCACATTACATCTGAAACTATCTCAATATGATTTCCATATTGGAGCAAAATTATATACCAACAAAAGAAATGTACCCACCAAATTTTCATACGAAGTAGTAGTAGTAGTAGAAGAAGAATTGCTATGGCGGCTGCAACCCCTTTCCCATTCAGGAGATCTTCGCGGTTAATTCACACGAAAATGAAGAACTCAATGTATGTCCTACTCATTCGCGACAATTTTTCTTTCCATTTGCTGGAGAAGGAGAGTATCGTGGAGTGAAGCTTCAGATCGATAAGATTCCAAAATGGAAAAACCCTATCGGGATGGGTAGTGGCACTCTTCCAGAGACGACTACAGAGACGACGAACATGCTATAA

mRNA sequence

ATGAAAGAGATCTTCGCGGTTAATTCACACGAAAATGAAGAACTCAATGTATGTCCTACTCATTCGCGACAATTTTTCTTTCCATTTGCTGGAGAAGGAGAGTATCGTGGAGTGAAGCTTCAGATCGATAAGATTCCAAAATGGAAAAACCCTATCGGGATGGGTAGTGGCACTCTTCCAGAGACGACTACAGAGACGACGAACATGCTATAA

Coding sequence (CDS)

ATGAAAGAGATCTTCGCGGTTAATTCACACGAAAATGAAGAACTCAATGTATGTCCTACTCATTCGCGACAATTTTTCTTTCCATTTGCTGGAGAAGGAGAGTATCGTGGAGTGAAGCTTCAGATCGATAAGATTCCAAAATGGAAAAACCCTATCGGGATGGGTAGTGGCACTCTTCCAGAGACGACTACAGAGACGACGAACATGCTATAA

Protein sequence

MKEIFAVNSHENEELNVCPTHSRQFFFPFAGEGEYRGVKLQIDKIPKWKNPIGMGSGTLPETTTETTNML
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G013780.1CsGy3G013780.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..70

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G013780Cucumber (Gy14) v2cgybcgybB104
CsGy3G013780Cucurbita maxima (Rimu)cgybcmaB318
CsGy3G013780Cucurbita maxima (Rimu)cgybcmaB345
CsGy3G013780Cucurbita maxima (Rimu)cgybcmaB349
CsGy3G013780Cucurbita maxima (Rimu)cgybcmaB427
CsGy3G013780Cucurbita maxima (Rimu)cgybcmaB454
CsGy3G013780Cucurbita moschata (Rifu)cgybcmoB290
CsGy3G013780Cucurbita moschata (Rifu)cgybcmoB322
CsGy3G013780Cucurbita moschata (Rifu)cgybcmoB317
CsGy3G013780Cucurbita moschata (Rifu)cgybcmoB401
CsGy3G013780Cucurbita moschata (Rifu)cgybcmoB421
CsGy3G013780Cucurbita pepo (Zucchini)cgybcpeB303
CsGy3G013780Cucurbita pepo (Zucchini)cgybcpeB310
CsGy3G013780Cucurbita pepo (Zucchini)cgybcpeB354
CsGy3G013780Cucurbita pepo (Zucchini)cgybcpeB406
CsGy3G013780Cucurbita pepo (Zucchini)cgybcpeB454
CsGy3G013780Cucumber (Chinese Long) v2cgybcuB109
CsGy3G013780Cucumber (Chinese Long) v2cgybcuB141
CsGy3G013780Bottle gourd (USVL1VR-Ls)cgyblsiB136
CsGy3G013780Bottle gourd (USVL1VR-Ls)cgyblsiB157
CsGy3G013780Bottle gourd (USVL1VR-Ls)cgyblsiB184
CsGy3G013780Melon (DHL92) v3.5.1cgybmeB149
CsGy3G013780Melon (DHL92) v3.5.1cgybmeB200
CsGy3G013780Melon (DHL92) v3.6.1cgybmedB148
CsGy3G013780Melon (DHL92) v3.6.1cgybmedB201
CsGy3G013780Watermelon (Charleston Gray)cgybwcgB169
CsGy3G013780Watermelon (Charleston Gray)cgybwcgB203
CsGy3G013780Watermelon (Charleston Gray)cgybwcgB230
CsGy3G013780Watermelon (97103) v1cgybwmB179
CsGy3G013780Watermelon (97103) v1cgybwmB217
CsGy3G013780Watermelon (97103) v1cgybwmB262
CsGy3G013780Wild cucumber (PI 183967)cgybcpiB110
CsGy3G013780Wild cucumber (PI 183967)cgybcpiB144
CsGy3G013780Silver-seed gourdcarcgybB0071
CsGy3G013780Silver-seed gourdcarcgybB0239
CsGy3G013780Silver-seed gourdcarcgybB0333
CsGy3G013780Silver-seed gourdcarcgybB0605
CsGy3G013780Cucumber (Chinese Long) v3cgybcucB117
CsGy3G013780Cucumber (Chinese Long) v3cgybcucB145
CsGy3G013780Watermelon (97103) v2cgybwmbB196
CsGy3G013780Watermelon (97103) v2cgybwmbB222
CsGy3G013780Watermelon (97103) v2cgybwmbB248
CsGy3G013780Wax gourdcgybwgoB245
CsGy3G013780Wax gourdcgybwgoB257