CsGy3G011080 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G011080
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	putative F-box protein PP2-B12
Location	Chr3 : 8642388 .. 8642848 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATGATATTGAAATTGTGGAAGTCTAAAGCTTATAAAACCACAGGTTTTCTGAAGTGGCTGAGTTACAATATGTGTGGTGGCTTGAAATCAAAGGGAAAATAGAGGGTAGAAATTTAAGTCCTAAAACCAAATATGCAGCTTACTTTGTGTTCAAGCTTGTGGAAGACAATTTTTGTCGCCATGTGTTTGAAACAACACCTGTTTCATTAGAAGTTCATTTTGAAGGGGCAGAGGTTGAAGAAGATAGAAGGAAAAGGGTAATTTTGGACCCTCTTGAAGGATCTTCTGTAGTTTGTGTAGAAAGAAGTGATGGATGGATGGAGGTTGAAATGGGTGAATTCTTCAATGAATGTGGAGACGATGGGTCGATTATTTTCCATTTGATGCAGATTGATAGGCTGAGAAAAGGTGGATTAATTGTTGAAGGAGTTGAGATTAGACCTAAATATGAGTAG

mRNA sequence

ATGGTAATGATATTGAAATTGTGGAAGTCTAAAGCTTATAAAACCACAGTGGCTGAGTTACAATATGTGTGGTGGCTTGAAATCAAAGGGAAAATAGAGGGTAGAAATTTAAGTCCTAAAACCAAATATGCAGCTTACTTTGTGTTCAAGCTTGTGGAAGACAATTTTTGTCGCCATGTGTTTGAAACAACACCTGTTTCATTAGAAGTTCATTTTGAAGGGGCAGAGGTTGAAGAAGATAGAAGGAAAAGGGTAATTTTGGACCCTCTTGAAGGATCTTCTGTAGTTTGTGTAGAAAGAAGTGATGGATGGATGGAGGTTGAAATGGGTGAATTCTTCAATGAATGTGGAGACGATGGGTCGATTATTTTCCATTTGATGCAGATTGATAGGCTGAGAAAAGGTGGATTAATTGTTGAAGGAGTTGAGATTAGACCTAAATATGAGTAG

Coding sequence (CDS)

ATGGTAATGATATTGAAATTGTGGAAGTCTAAAGCTTATAAAACCACAGTGGCTGAGTTACAATATGTGTGGTGGCTTGAAATCAAAGGGAAAATAGAGGGTAGAAATTTAAGTCCTAAAACCAAATATGCAGCTTACTTTGTGTTCAAGCTTGTGGAAGACAATTTTTGTCGCCATGTGTTTGAAACAACACCTGTTTCATTAGAAGTTCATTTTGAAGGGGCAGAGGTTGAAGAAGATAGAAGGAAAAGGGTAATTTTGGACCCTCTTGAAGGATCTTCTGTAGTTTGTGTAGAAAGAAGTGATGGATGGATGGAGGTTGAAATGGGTGAATTCTTCAATGAATGTGGAGACGATGGGTCGATTATTTTCCATTTGATGCAGATTGATAGGCTGAGAAAAGGTGGATTAATTGTTGAAGGAGTTGAGATTAGACCTAAATATGAGTAG

Protein sequence

MVMILKLWKSKAYKTTVAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAEVEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLRKGGLIVEGVEIRPKYE

Homology

[Close]

BLAST of CsGy3G011080 vs. NCBI nr
Match: XP_011650883.1 (PREDICTED: putative F-box protein PP2-B12 [Cucumis sativus] >KGN56751.1 hypothetical protein Csa_3G132530 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 6.0e-72
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE
Sbjct: 135 VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 194

Query: 77  VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLRKGG 136
           VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLRKGG
Sbjct: 195 VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLRKGG 254

Query: 137 LIVEGVEIRPKYE 150
           LIVEGVEIRPKYE
Sbjct: 255 LIVEGVEIRPKYE 267

[Close]

BLAST of CsGy3G011080 vs. NCBI nr
Match: XP_004134006.2 (PREDICTED: putative F-box protein PP2-B12 [Cucumis sativus] >KGN56749.1 hypothetical protein Csa_3G132020 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 6.7e-55
Identity = 112/147 (76.19%), Postives = 121/147 (82.31%), Query Frame = 0


Query: 8   WKSKAYKTT----VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFET 67
           W  K+  T+    VAELQ VWWLEIKGKIE R+LSPKTKYAAYFVFKLVED + R  F+ 
Sbjct: 122 WTWKSIPTSRFREVAELQVVWWLEIKGKIEARSLSPKTKYAAYFVFKLVEDRYSRRGFQI 181

Query: 68  TPVSLEVHFEGAEVEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSII 127
            PVSLEVHFEGAEVEED RKRVILDP EGS VVC ERSDGWMEVEMGE FNE GDDG+II
Sbjct: 182 RPVSLEVHFEGAEVEEDGRKRVILDPPEGSLVVCEERSDGWMEVEMGEIFNELGDDGTII 241

Query: 128 FHLMQIDR-LRKGGLIVEGVEIRPKYE 150
           FHL QID  + KGGLIVEG+EIRPKY+
Sbjct: 242 FHLKQIDNFISKGGLIVEGIEIRPKYD 268

[Close]

BLAST of CsGy3G011080 vs. NCBI nr
Match: XP_008438376.1 (PREDICTED: putative F-box protein PP2-B12 [Cucumis melo])

HSP 1 Score: 219.5 bits (558), Expect = 7.4e-54
Identity = 109/147 (74.15%), Postives = 121/147 (82.31%), Query Frame = 0


Query: 8   WKSKAYKTT----VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFET 67
           W  K++ T+    VAELQ VWWLEIKGKIE R+LSPKTKYAAYFVFKLV D + RH F+ 
Sbjct: 122 WTWKSFPTSRYPEVAELQVVWWLEIKGKIEARSLSPKTKYAAYFVFKLVGDRYSRHGFQI 181

Query: 68  TPVSLEVHFEGAEVEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSII 127
            PVSLEVHFEGAEVEE+  KRVILDP EGS VVC ERSDGWMEVEMGE FNE GDDG+II
Sbjct: 182 RPVSLEVHFEGAEVEENGTKRVILDPPEGSLVVCEERSDGWMEVEMGEIFNELGDDGTII 241

Query: 128 FHLMQIDR-LRKGGLIVEGVEIRPKYE 150
           FHL QID  + KGGLIVEG++IRPKY+
Sbjct: 242 FHLKQIDNFISKGGLIVEGIDIRPKYD 268

[Close]

BLAST of CsGy3G011080 vs. NCBI nr
Match: XP_004134378.2 (PREDICTED: putative F-box protein PP2-B12 [Cucumis sativus] >KGN56750.1 hypothetical protein Csa_3G132520 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 2.2e-50
Identity = 101/133 (75.94%), Postives = 109/133 (81.95%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           VAEL+ VWWLEIKGKIEGRNLSPKTKYAAYFVFK  E +F    F T PVSLEV+FEG E
Sbjct: 135 VAELRVVWWLEIKGKIEGRNLSPKTKYAAYFVFKFKEGDFQHDGFGTKPVSLEVYFEGEE 194

Query: 77  VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLRKGG 136
           V ED  K V+LDP EGS VVC ERSDGWMEVEMGEFFNE GDDG +IFHL QID + KGG
Sbjct: 195 VGEDGTKMVLLDPPEGSPVVCKERSDGWMEVEMGEFFNELGDDGMVIFHLKQIDGIIKGG 254

Query: 137 LIVEGVEIRPKYE 150
           LIVEG+EI PKY+
Sbjct: 255 LIVEGIEISPKYD 267

[Close]

BLAST of CsGy3G011080 vs. NCBI nr
Match: XP_023528482.1 (putative F-box protein PP2-B12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.6 bits (457), Expect = 3.8e-42
Identity = 92/132 (69.70%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           VAELQ VWWLEIKG+IE RNLSP+T YAAY VFKLVED + R  F   PV L V+FEGAE
Sbjct: 135 VAELQTVWWLEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQRRGFRERPVLLRVYFEGAE 194

Query: 77  VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQI-DRLRKG 136
           VEE   K  ILDP EGS V   ER+DGWME+EMGE FNE GDDGSIIFHL +  D + K 
Sbjct: 195 VEEG--KMAILDPREGSLVAFEERADGWMEIEMGEIFNELGDDGSIIFHLKEFHDFITKS 254

Query: 137 GLIVEGVEIRPK 148
           GLIVEG+EIRPK
Sbjct: 255 GLIVEGIEIRPK 264

[Close]

BLAST of CsGy3G011080 vs. TAIR10
Match: AT2G02340.1 (phloem protein 2-B8)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-19
Identity = 60/144 (41.67%), Postives = 82/144 (56.94%), Query Frame = 0


Query: 16  TVAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGA 75
           TVAEL  V   EI+G+I  R +SPKT+Y+AY V+K +  N C + FE   V + V   G 
Sbjct: 161 TVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKL--NIC-YGFENVAVEVVVGVVGQ 220

Query: 76  EVEEDRRKRVILDPL---------EGSSVVCVE-RSDGWMEVEMGEFFNECG---DDGSI 135
           ++EE  R+ +  D            G ++V  E R DGWME+++GEFFNE G   DD   
Sbjct: 221 DLEESCRRYICFDETMDEQFRRRDRGKNLVKPERRKDGWMEIKIGEFFNEGGLLNDDEIE 280

Query: 136 IFHLMQIDRLRKGGLIVEGVEIRP 147
           +  L    R  K GLI++G+EIRP
Sbjct: 281 MVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of CsGy3G011080 vs. TAIR10
Match: AT2G02360.1 (phloem protein 2-B10)

HSP 1 Score: 84.0 bits (206), Expect = 8.8e-17
Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           VA+L+ V W EI+G+   R LSP+T+Y+AY VFK V+   C + F+   +   V   G E
Sbjct: 138 VAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDK--C-YGFQNVAIEAAVGVVGQE 197

Query: 77  VEE---------DRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECG--DDGSIIFH 136
                        R +R ++ P         +R DGWME+E+GEFFN+ G  D+  I   
Sbjct: 198 PSRRLICFSEAIRRGRRNVVKP--------KQREDGWMEIELGEFFNDGGIMDNDEIEMS 257

Query: 137 LMQIDRL-RKGGLIVEGVEIRP 147
            ++  +L RK GLI++G+EIRP
Sbjct: 258 ALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of CsGy3G011080 vs. TAIR10
Match: AT5G24560.1 (phloem protein 2-B12)

HSP 1 Score: 81.6 bits (200), Expect = 4.4e-16
Identity = 53/131 (40.46%), Postives = 68/131 (51.91%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           VA L  V W EI+GKI    LS  T Y+AY VFK  E       FE+ P  LEV F    
Sbjct: 127 VAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFK--EQEMGSFGFESLP--LEVSFRSTR 186

Query: 77  VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLRKGG 136
            E    +RV L      S     R DGW+E+E+GE++    D+   +  L   +   KGG
Sbjct: 187 TEVYNNRRVFL-----KSGTQESREDGWLEIELGEYYVGFDDEEIEMSVLETREGGWKGG 246

Query: 137 LIVEGVEIRPK 148
           +IV+G+EIRPK
Sbjct: 247 IIVQGIEIRPK 248

[Close]

BLAST of CsGy3G011080 vs. TAIR10
Match: AT1G80110.1 (phloem protein 2-B11)

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-15
Identity = 59/134 (44.03%), Postives = 69/134 (51.49%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNF-CRHVFETTPVSLEVHFEGA 76
           VAEL  VWWLEI GKI    LS  T YAAYFVFK     +  R   ET+ V  +      
Sbjct: 125 VAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFRQPVETSLVLADTE-STD 184

Query: 77  EVEEDRRKRVILDP--LEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQI-DRL 136
            V +     ++ D    EG S V   R DGW EVE+G+FF   GD G I   L +     
Sbjct: 185 NVVQPSMISLMQDSGGEEGQSPVL--RRDGWYEVELGQFFKRRGDLGEIEMSLKETKGPY 244

Query: 137 RKGGLIVEGVEIRP 147
            K GLIV G+EIRP
Sbjct: 245 EKKGLIVYGIEIRP 255

[Close]

BLAST of CsGy3G011080 vs. TAIR10
Match: AT2G02250.1 (phloem protein 2-B2)

HSP 1 Score: 75.1 bits (183), Expect = 4.1e-14
Identity = 51/143 (35.66%), Postives = 68/143 (47.55%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           V EL  V W E++G +  + LSP T+Y+AY VFK    N C ++ +  PV   V   G E
Sbjct: 172 VPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFK--TKNGCPNLGD-VPVEATVGLVGQE 231

Query: 77  VEE-------------DRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSII 136
             +             DR  R +  P         +R DGWME E+G+FFNE G D    
Sbjct: 232 SSQRHIYFVGPSDQRRDRETRDVTRP--------TKRKDGWMEAELGQFFNESGCDVVDT 291

Query: 137 FHLMQIDRLRKGGLIVEGVEIRP 147
             L       K GLI++G+E RP
Sbjct: 292 SILEIKTPYWKRGLIIQGIEFRP 303

[Close]

BLAST of CsGy3G011080 vs. Swiss-Prot
Match: sp|Q9ZVQ8|PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-18
Identity = 60/144 (41.67%), Postives = 82/144 (56.94%), Query Frame = 0


Query: 16  TVAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGA 75
           TVAEL  V   EI+G+I  R +SPKT+Y+AY V+K +  N C + FE   V + V   G 
Sbjct: 161 TVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKL--NIC-YGFENVAVEVVVGVVGQ 220

Query: 76  EVEEDRRKRVILDPL---------EGSSVVCVE-RSDGWMEVEMGEFFNECG---DDGSI 135
           ++EE  R+ +  D            G ++V  E R DGWME+++GEFFNE G   DD   
Sbjct: 221 DLEESCRRYICFDETMDEQFRRRDRGKNLVKPERRKDGWMEIKIGEFFNEGGLLNDDEIE 280

Query: 136 IFHLMQIDRLRKGGLIVEGVEIRP 147
           +  L    R  K GLI++G+EIRP
Sbjct: 281 MVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of CsGy3G011080 vs. Swiss-Prot
Match: sp|Q9ZVQ6|P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-15
Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           VA+L+ V W EI+G+   R LSP+T+Y+AY VFK V+   C + F+   +   V   G E
Sbjct: 138 VAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDK--C-YGFQNVAIEAAVGVVGQE 197

Query: 77  VEE---------DRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECG--DDGSIIFH 136
                        R +R ++ P         +R DGWME+E+GEFFN+ G  D+  I   
Sbjct: 198 PSRRLICFSEAIRRGRRNVVKP--------KQREDGWMEIELGEFFNDGGIMDNDEIEMS 257

Query: 137 LMQIDRL-RKGGLIVEGVEIRP 147
            ++  +L RK GLI++G+EIRP
Sbjct: 258 ALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of CsGy3G011080 vs. Swiss-Prot
Match: sp|Q9FLU7|P2B12_ARATH (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.9e-15
Identity = 53/131 (40.46%), Postives = 68/131 (51.91%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           VA L  V W EI+GKI    LS  T Y+AY VFK  E       FE+ P  LEV F    
Sbjct: 127 VAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFK--EQEMGSFGFESLP--LEVSFRSTR 186

Query: 77  VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLRKGG 136
            E    +RV L      S     R DGW+E+E+GE++    D+   +  L   +   KGG
Sbjct: 187 TEVYNNRRVFL-----KSGTQESREDGWLEIELGEYYVGFDDEEIEMSVLETREGGWKGG 246

Query: 137 LIVEGVEIRPK 148
           +IV+G+EIRPK
Sbjct: 247 IIVQGIEIRPK 248

[Close]

BLAST of CsGy3G011080 vs. Swiss-Prot
Match: sp|Q949S5|P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.0e-14
Identity = 59/134 (44.03%), Postives = 69/134 (51.49%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNF-CRHVFETTPVSLEVHFEGA 76
           VAEL  VWWLEI GKI    LS  T YAAYFVFK     +  R   ET+ V  +      
Sbjct: 125 VAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFRQPVETSLVLADTE-STD 184

Query: 77  EVEEDRRKRVILDP--LEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQI-DRL 136
            V +     ++ D    EG S V   R DGW EVE+G+FF   GD G I   L +     
Sbjct: 185 NVVQPSMISLMQDSGGEEGQSPVL--RRDGWYEVELGQFFKRRGDLGEIEMSLKETKGPY 244

Query: 137 RKGGLIVEGVEIRP 147
            K GLIV G+EIRP
Sbjct: 245 EKKGLIVYGIEIRP 255

[Close]

BLAST of CsGy3G011080 vs. Swiss-Prot
Match: sp|Q9ZVR5|PP2B2_ARATH (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 7.4e-13
Identity = 51/143 (35.66%), Postives = 68/143 (47.55%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           V EL  V W E++G +  + LSP T+Y+AY VFK    N C ++ +  PV   V   G E
Sbjct: 172 VPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFK--TKNGCPNLGD-VPVEATVGLVGQE 231

Query: 77  VEE-------------DRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSII 136
             +             DR  R +  P         +R DGWME E+G+FFNE G D    
Sbjct: 232 SSQRHIYFVGPSDQRRDRETRDVTRP--------TKRKDGWMEAELGQFFNESGCDVVDT 291

Query: 137 FHLMQIDRLRKGGLIVEGVEIRP 147
             L       K GLI++G+E RP
Sbjct: 292 SILEIKTPYWKRGLIIQGIEFRP 303

[Close]

BLAST of CsGy3G011080 vs. TrEMBL
Match: tr|A0A0A0L9G5|A0A0A0L9G5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 4.0e-72
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE
Sbjct: 135 VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 194

Query: 77  VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLRKGG 136
           VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLRKGG
Sbjct: 195 VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLRKGG 254

Query: 137 LIVEGVEIRPKYE 150
           LIVEGVEIRPKYE
Sbjct: 255 LIVEGVEIRPKYE 267

[Close]

BLAST of CsGy3G011080 vs. TrEMBL
Match: tr|A0A0A0L6T0|A0A0A0L6T0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132020 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.4e-55
Identity = 112/147 (76.19%), Postives = 121/147 (82.31%), Query Frame = 0


Query: 8   WKSKAYKTT----VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFET 67
           W  K+  T+    VAELQ VWWLEIKGKIE R+LSPKTKYAAYFVFKLVED + R  F+ 
Sbjct: 122 WTWKSIPTSRFREVAELQVVWWLEIKGKIEARSLSPKTKYAAYFVFKLVEDRYSRRGFQI 181

Query: 68  TPVSLEVHFEGAEVEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSII 127
            PVSLEVHFEGAEVEED RKRVILDP EGS VVC ERSDGWMEVEMGE FNE GDDG+II
Sbjct: 182 RPVSLEVHFEGAEVEEDGRKRVILDPPEGSLVVCEERSDGWMEVEMGEIFNELGDDGTII 241

Query: 128 FHLMQIDR-LRKGGLIVEGVEIRPKYE 150
           FHL QID  + KGGLIVEG+EIRPKY+
Sbjct: 242 FHLKQIDNFISKGGLIVEGIEIRPKYD 268

[Close]

BLAST of CsGy3G011080 vs. TrEMBL
Match: tr|A0A1S3AW73|A0A1S3AW73_CUCME (putative F-box protein PP2-B12 OS=Cucumis melo OX=3656 GN=LOC103483492 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 4.9e-54
Identity = 109/147 (74.15%), Postives = 121/147 (82.31%), Query Frame = 0


Query: 8   WKSKAYKTT----VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFET 67
           W  K++ T+    VAELQ VWWLEIKGKIE R+LSPKTKYAAYFVFKLV D + RH F+ 
Sbjct: 122 WTWKSFPTSRYPEVAELQVVWWLEIKGKIEARSLSPKTKYAAYFVFKLVGDRYSRHGFQI 181

Query: 68  TPVSLEVHFEGAEVEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSII 127
            PVSLEVHFEGAEVEE+  KRVILDP EGS VVC ERSDGWMEVEMGE FNE GDDG+II
Sbjct: 182 RPVSLEVHFEGAEVEENGTKRVILDPPEGSLVVCEERSDGWMEVEMGEIFNELGDDGTII 241

Query: 128 FHLMQIDR-LRKGGLIVEGVEIRPKYE 150
           FHL QID  + KGGLIVEG++IRPKY+
Sbjct: 242 FHLKQIDNFISKGGLIVEGIDIRPKYD 268

[Close]

BLAST of CsGy3G011080 vs. TrEMBL
Match: tr|A0A0A0L445|A0A0A0L445_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132520 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-50
Identity = 101/133 (75.94%), Postives = 109/133 (81.95%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           VAEL+ VWWLEIKGKIEGRNLSPKTKYAAYFVFK  E +F    F T PVSLEV+FEG E
Sbjct: 135 VAELRVVWWLEIKGKIEGRNLSPKTKYAAYFVFKFKEGDFQHDGFGTKPVSLEVYFEGEE 194

Query: 77  VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLRKGG 136
           V ED  K V+LDP EGS VVC ERSDGWMEVEMGEFFNE GDDG +IFHL QID + KGG
Sbjct: 195 VGEDGTKMVLLDPPEGSPVVCKERSDGWMEVEMGEFFNELGDDGMVIFHLKQIDGIIKGG 254

Query: 137 LIVEGVEIRPKYE 150
           LIVEG+EI PKY+
Sbjct: 255 LIVEGIEISPKYD 267

[Close]

BLAST of CsGy3G011080 vs. TrEMBL
Match: tr|V4U3R9|V4U3R9_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005650mg PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.5e-28
Identity = 68/132 (51.52%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 17  VAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETTPVSLEVHFEGAE 76
           VAEL+ VWW EIKG+IE + LS KT YAAY VFK V+    R+ FE  P+   VHFEG++
Sbjct: 134 VAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVD---TRYGFERRPIEFGVHFEGSD 193

Query: 77  VEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIFHLMQIDRLR-KG 136
            EE  R RV+LD  +    +  +R DGWME++MGEFFNE GDDG++I  +   D    K 
Sbjct: 194 TEE--RYRVVLDLPKDMPQLSQDRGDGWMEIKMGEFFNENGDDGTVICSVFDFDGYSPKH 253

Query: 137 GLIVEGVEIRPK 148
           G+I++G+E+RPK
Sbjct: 254 GIIIQGIEVRPK 260

The following BLAST results are available for this feature:

BLAST of CsGy3G011080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650883.1	6.0e-72	100.00	PREDICTED: putative F-box protein PP2-B12 [Cucumis sativus] >KGN56751.1 hypothet...	[more]
XP_004134006.2	6.7e-55	76.19	PREDICTED: putative F-box protein PP2-B12 [Cucumis sativus] >KGN56749.1 hypothet...	[more]
XP_008438376.1	7.4e-54	74.15	PREDICTED: putative F-box protein PP2-B12 [Cucumis melo]	[more]
XP_004134378.2	2.2e-50	75.94	PREDICTED: putative F-box protein PP2-B12 [Cucumis sativus] >KGN56750.1 hypothet...	[more]
XP_023528482.1	3.8e-42	69.70	putative F-box protein PP2-B12 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G011080 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02340.1	1.5e-19	41.67	phloem protein 2-B8	[more]
AT2G02360.1	8.8e-17	38.03	phloem protein 2-B10	[more]
AT5G24560.1	4.4e-16	40.46	phloem protein 2-B12	[more]
AT1G80110.1	1.7e-15	44.03	phloem protein 2-B11	[more]
AT2G02250.1	4.1e-14	35.66	phloem protein 2-B2	[more]

BLAST of CsGy3G011080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZVQ8\|PP2B8_ARATH	2.6e-18	41.67	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
sp\|Q9ZVQ6\|P2B10_ARATH	1.6e-15	38.03	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
sp\|Q9FLU7\|P2B12_ARATH	7.9e-15	40.46	Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV...	[more]
sp\|Q949S5\|P2B11_ARATH	3.0e-14	44.03	F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1	[more]
sp\|Q9ZVR5\|PP2B2_ARATH	7.4e-13	35.66	Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2	[more]

BLAST of CsGy3G011080 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L9G5\|A0A0A0L9G5_CUCSA	4.0e-72	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 SV=1	[more]
tr\|A0A0A0L6T0\|A0A0A0L6T0_CUCSA	4.4e-55	76.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132020 PE=4 SV=1	[more]
tr\|A0A1S3AW73\|A0A1S3AW73_CUCME	4.9e-54	74.15	putative F-box protein PP2-B12 OS=Cucumis melo OX=3656 GN=LOC103483492 PE=4 SV=1	[more]
tr\|A0A0A0L445\|A0A0A0L445_CUCSA	1.5e-50	75.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132520 PE=4 SV=1	[more]
tr\|V4U3R9\|V4U3R9_9ROSI	3.5e-28	51.52	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005650mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025886	PP2-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G011080.1	CsGy3G011080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 13..146 e-value: 9.7E-32 score: 109.9
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 15..147
None	No IPR available	PANTHER	PTHR32278:SF2	F-BOX PROTEIN PP2-B11-RELATED	coord: 15..147

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G011080	Bhi01G000032	Wax gourd	cgybwgoB265

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G011080	Cucumber (Gy14) v2	cgybcgybB054
CsGy3G011080	Cucumber (Gy14) v2	cgybcgybB082
CsGy3G011080	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G011080	Cucurbita maxima (Rimu)	cgybcmaB345
CsGy3G011080	Cucurbita maxima (Rimu)	cgybcmaB384
CsGy3G011080	Cucurbita maxima (Rimu)	cgybcmaB391
CsGy3G011080	Cucurbita maxima (Rimu)	cgybcmaB427
CsGy3G011080	Cucurbita maxima (Rimu)	cgybcmaB454
CsGy3G011080	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G011080	Cucurbita moschata (Rifu)	cgybcmoB317
CsGy3G011080	Cucurbita moschata (Rifu)	cgybcmoB358
CsGy3G011080	Cucurbita moschata (Rifu)	cgybcmoB362
CsGy3G011080	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G011080	Cucurbita moschata (Rifu)	cgybcmoB421
CsGy3G011080	Cucurbita pepo (Zucchini)	cgybcpeB302
CsGy3G011080	Cucurbita pepo (Zucchini)	cgybcpeB341
CsGy3G011080	Cucurbita pepo (Zucchini)	cgybcpeB354
CsGy3G011080	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G011080	Cucurbita pepo (Zucchini)	cgybcpeB432
CsGy3G011080	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G011080	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G011080	Cucumber (Chinese Long) v2	cgybcuB121
CsGy3G011080	Bottle gourd (USVL1VR-Ls)	cgyblsiB136
CsGy3G011080	Bottle gourd (USVL1VR-Ls)	cgyblsiB196
CsGy3G011080	Bottle gourd (USVL1VR-Ls)	cgyblsiB204
CsGy3G011080	Melon (DHL92) v3.5.1	cgybmeB195
CsGy3G011080	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G011080	Melon (DHL92) v3.6.1	cgybmedB197
CsGy3G011080	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G011080	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G011080	Watermelon (Charleston Gray)	cgybwcgB230
CsGy3G011080	Watermelon (Charleston Gray)	cgybwcgB238
CsGy3G011080	Watermelon (97103) v1	cgybwmB209
CsGy3G011080	Watermelon (97103) v1	cgybwmB217
CsGy3G011080	Watermelon (97103) v1	cgybwmB262
CsGy3G011080	Wild cucumber (PI 183967)	cgybcpiB109
CsGy3G011080	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G011080	Wild cucumber (PI 183967)	cgybcpiB121
CsGy3G011080	Silver-seed gourd	carcgybB0245
CsGy3G011080	Silver-seed gourd	carcgybB0772
CsGy3G011080	Silver-seed gourd	carcgybB0948
CsGy3G011080	Silver-seed gourd	carcgybB1059
CsGy3G011080	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G011080	Cucumber (Chinese Long) v3	cgybcucB125
CsGy3G011080	Watermelon (97103) v2	cgybwmbB196
CsGy3G011080	Watermelon (97103) v2	cgybwmbB222
CsGy3G011080	Watermelon (97103) v2	cgybwmbB231
CsGy3G011080	Wax gourd	cgybwgoB242
CsGy3G011080	Wax gourd	cgybwgoB293