CsGy3G007270 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G007270
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein mago nashi homolog
Location	Chr3 : 6338876 .. 6340504 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGGAGGATTTGGAGAACGGAGAGTTTTACTTGAGATATTATGTGGGGCACAAAGGGAAATTTGGACACGAGTTCTTGGAGTTCGAATTTCGACCCGATGGAAAGCTTCGCTATGCTAACAACTCCAACTACAAGAACGATACCATGATTCGCAAGGAAGTCTACCTCACCCCTGCTGTCCTTCGGGAATGCCGTCGAATCATCTCCGATAGCGAGGTCAGGATCTTAACTTCTCTGTCCCTTCCTTTATGTCTTTAGGGTTTCCTTTATATCGCCATTTTTAGGGTTTTCTTCAACTTCATGGTGCGAGGGACAGATGGTCACCTTTCATTATTTCAAATAACTGGGGCTATCAACATCAATCTTCTCCAAATTAGGTCATCGGAGTAAAACCCTTTCTTCCAGCATTTCCATTTATTAAACTAGTTACAAATAATTCTTCATCGTGGGAAACGGGTATTTCTTTCGGTTTGCAACAAAATTTGAAAGTAATAAGTAAAATTGAACATCATAGACATAAGATCAAAGTTCACCATTTTTTGATGTCCGGGGGACGAAATAGTTTTGACACTCTTCGACAGAGTTCAATTTAAGCTTCGTTATTAGTTGTAACTTAAAGAAAGACCAGTACGCATATCAATAAGACTTCAAAATTTATGGAACGTGTTGAATCGAAGATGATCCGAAGTAGTGTGAGACAATATCTTAACTTTTGAAAGATGAAATTGGATCCCTTTTGTTTGACCAAATGAGAACACAATTGACAGAGGGAGATCAATCAAAGAAGGTCATAAAAAAACTTATATCTTGTATGTGATTTTCACTTGAAGATATCTTGCGACTCCAACCAGCAATAATGAAGTGACTGGGAAACGCACCACGCCGTGCACTGTAGTTAAAAAGAGCCTCAAGCTCATCTCAAAATCATATTTCAAAAGAATTTTACCACACCGGGGTCATTGAATTTTTTGGGTCTCCATATGCTGTTATTGAATGATCTTTCTCATAGATCCGATATATCACCCTCTTTTCTTAAGCCATGCAAAAGAAGACGAGATTGTTTTACTATTTGGATTTCGAACTTCTACTATTTTCTTCCTTACAGTCTTAAGAAAATGGCACCTTTTCGATTATGGAGGAAGATGTTGCGTTTCAAGTTTTTTGAGATTTTGTTTTGAGATAATGCATGTGAAGTGTTCTCGGAGTTAGTCTGTTAATCAATTCTCTTGAAATGCTTCGTTTTTATATCATCTAATAGAGTCCCAAATAATGAGGTTACTGTTGCATCTGTTCAGATTATGAAGGAAGATGATAATAATTGGCCAGAACCAGATCGGGTTGGACGACAGGAGCTTGAGATTGTGATGGGAAATGAGCATATCTCCTTCACCACGTCTAAGATTGGATCTCTTGTCGATGTGCAGAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGTAAGGCTTAGTCTTCCATGTAGATTACTTTTAAGCCATATCTATTTCCAGATTCTACGCATGGGTCATATATGCTTTTCTTTGGCTGTAGGATCTGAAATGCTTTGTCTTCTCTCTCATTTCACTCCACTTCAAGATCAAGCCAATTTAA

mRNA sequence

ATGGCGGCGGAGGATTTGGAGAACGGAGAGTTTTACTTGAGATATTATGTGGGGCACAAAGGGAAATTTGGACACGAGTTCTTGGAGTTCGAATTTCGACCCGATGGAAAGCTTCGCTATGCTAACAACTCCAACTACAAGAACGATACCATGATTCGCAAGGAAGTCTACCTCACCCCTGCTGTCCTTCGGGAATGCCGTCGAATCATCTCCGATAGCGAGATTATGAAGGAAGATGATAATAATTGGCCAGAACCAGATCGGGTTGGACGACAGGAGCTTGAGATTGTGATGGGAAATGAGCATATCTCCTTCACCACGTCTAAGATTGGATCTCTTGTCGATGTGCAGAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGATCTGAAATGCTTTGTCTTCTCTCTCATTTCACTCCACTTCAAGATCAAGCCAATTTAA

Coding sequence (CDS)

ATGGCGGCGGAGGATTTGGAGAACGGAGAGTTTTACTTGAGATATTATGTGGGGCACAAAGGGAAATTTGGACACGAGTTCTTGGAGTTCGAATTTCGACCCGATGGAAAGCTTCGCTATGCTAACAACTCCAACTACAAGAACGATACCATGATTCGCAAGGAAGTCTACCTCACCCCTGCTGTCCTTCGGGAATGCCGTCGAATCATCTCCGATAGCGAGATTATGAAGGAAGATGATAATAATTGGCCAGAACCAGATCGGGTTGGACGACAGGAGCTTGAGATTGTGATGGGAAATGAGCATATCTCCTTCACCACGTCTAAGATTGGATCTCTTGTCGATGTGCAGAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGATCTGAAATGCTTTGTCTTCTCTCTCATTTCACTCCACTTCAAGATCAAGCCAATTTAA

Protein sequence

MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI

Homology

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BLAST of CsGy3G007270 vs. NCBI nr
Match: XP_004133764.1 (PREDICTED: protein mago nashi homolog [Cucumis sativus] >KGN56341.1 hypothetical protein Csa_3G116780 [Cucumis sativus])

HSP 1 Score: 313.5 bits (802), Expect = 3.8e-82
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP
Sbjct: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60

Query: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120
           AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK
Sbjct: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120

Query: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
Sbjct: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 152

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BLAST of CsGy3G007270 vs. NCBI nr
Match: XP_008437772.1 (PREDICTED: protein mago nashi homolog [Cucumis melo])

HSP 1 Score: 312.4 bits (799), Expect = 8.6e-82
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           M+AEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP
Sbjct: 1   MSAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60

Query: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120
           AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK
Sbjct: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120

Query: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
Sbjct: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 152

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BLAST of CsGy3G007270 vs. NCBI nr
Match: XP_022933981.1 (protein mago nashi homolog [Cucurbita moschata] >XP_022968427.1 protein mago nashi homolog [Cucurbita maxima] >XP_023531858.1 protein mago nashi homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 1.5e-81
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           MAAED+ENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP
Sbjct: 1   MAAEDMENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60

Query: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120
           AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK
Sbjct: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120

Query: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKCFVFSLISLH+KIKPI
Sbjct: 121 DPEGLRIFYYLVQDLKCFVFSLISLHYKIKPI 152

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BLAST of CsGy3G007270 vs. NCBI nr
Match: XP_022949012.1 (protein mago nashi homolog [Cucurbita moschata] >XP_022974248.1 protein mago nashi homolog [Cucurbita maxima] >XP_022975255.1 protein mago nashi homolog [Cucurbita maxima] >XP_023540895.1 protein mago nashi homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.8 bits (795), Expect = 2.5e-81
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           M+ EDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP
Sbjct: 1   MSGEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60

Query: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120
           AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK
Sbjct: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120

Query: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
Sbjct: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 152

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BLAST of CsGy3G007270 vs. NCBI nr
Match: XP_022133206.1 (protein mago nashi homolog [Momordica charantia])

HSP 1 Score: 308.9 bits (790), Expect = 9.5e-81
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 2   AAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPA 61
           AAEDLE GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE+YLTPA
Sbjct: 3   AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPA 62

Query: 62  VLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD 121
           VLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD
Sbjct: 63  VLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD 122

Query: 122 PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
Sbjct: 123 PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153

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BLAST of CsGy3G007270 vs. TAIR10
Match: AT1G02140.1 (mago nashi family protein)

HSP 1 Score: 276.2 bits (705), Expect = 1.2e-74
Identity = 134/152 (88.16%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           MAAE  E  EFYLRYYVGHKGKFGHEFLEFEFR DGKLRYANNSNYKNDT+IRKEV+LTP
Sbjct: 1   MAAE--EATEFYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTP 60

Query: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120
           AVL+EC+RI+S+SEI+KEDDNNWPEPDRVG+QELEIV+GNEHISF TSKIGSLVD QSS 
Sbjct: 61  AVLKECKRIVSESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSN 120

Query: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKC VFSLISLHFKIKPI
Sbjct: 121 DPEGLRIFYYLVQDLKCLVFSLISLHFKIKPI 150

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BLAST of CsGy3G007270 vs. Swiss-Prot
Match: sp|P49030|MGN2_ORYSJ (Protein mago nashi homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MAGO2 PE=1 SV=2)

HSP 1 Score: 285.4 bits (729), Expect = 3.7e-76
Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 2   AAEDLE-NGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 61
           A ED+   GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEV+++P
Sbjct: 7   AGEDVPGGGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSP 66

Query: 62  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 121
           +VLRE RRII +SEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQ+SK
Sbjct: 67  SVLREARRIIQESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQTSK 126

Query: 122 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKCFVFSLI+LHFKIKPI
Sbjct: 127 DPEGLRIFYYLVQDLKCFVFSLINLHFKIKPI 158

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BLAST of CsGy3G007270 vs. Swiss-Prot
Match: sp|O65806|MGN_EUPLA (Protein mago nashi homolog OS=Euphorbia lagascae OX=54672 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-74
Identity = 135/146 (92.47%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 7   ENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLREC 66
           E+ EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEV+LTPAVL+EC
Sbjct: 4   EDNEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLKEC 63

Query: 67  RRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLR 126
           RRII++SEIMKEDD NWP PDRVGRQELEIVMGNE+ISFTTSKIGSLVDVQ SKDPEGLR
Sbjct: 64  RRIIAESEIMKEDDANWPGPDRVGRQELEIVMGNEYISFTTSKIGSLVDVQRSKDPEGLR 123

Query: 127 IFYYLVQDLKCFVFSLISLHFKIKPI 153
           IFYYLV DLKCFVFSLISLHFKIKPI
Sbjct: 124 IFYYLVHDLKCFVFSLISLHFKIKPI 149

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BLAST of CsGy3G007270 vs. Swiss-Prot
Match: sp|O23676|MGN_ARATH (Protein mago nashi homolog OS=Arabidopsis thaliana OX=3702 GN=MAGO PE=1 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.2e-73
Identity = 134/152 (88.16%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           MAAE  E  EFYLRYYVGHKGKFGHEFLEFEFR DGKLRYANNSNYKNDT+IRKEV+LTP
Sbjct: 1   MAAE--EATEFYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTP 60

Query: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120
           AVL+EC+RI+S+SEI+KEDDNNWPEPDRVG+QELEIV+GNEHISF TSKIGSLVD QSS 
Sbjct: 61  AVLKECKRIVSESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSN 120

Query: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKC VFSLISLHFKIKPI
Sbjct: 121 DPEGLRIFYYLVQDLKCLVFSLISLHFKIKPI 150

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BLAST of CsGy3G007270 vs. Swiss-Prot
Match: sp|A0A0P0XB70|MGN1_ORYSJ (Protein mago nashi homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MAGO1 PE=1 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 8.4e-73
Identity = 131/143 (91.61%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 10  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRRI 69
           EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYK DTMIRKEV+++P+VLRE  RI
Sbjct: 14  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKKDTMIRKEVFVSPSVLREATRI 73

Query: 70  ISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFY 129
           I +SEIMKEDD+NWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQ+SKDPEGLRIFY
Sbjct: 74  IHESEIMKEDDSNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQTSKDPEGLRIFY 133

Query: 130 YLVQDLKCFVFSLISLHFKIKPI 153
           YLVQDLKCFVFSLI+LHFKIKPI
Sbjct: 134 YLVQDLKCFVFSLINLHFKIKPI 156

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BLAST of CsGy3G007270 vs. Swiss-Prot
Match: sp|Q566Y8|MGN_DANRE (Protein mago nashi homolog OS=Danio rerio OX=7955 GN=magoh PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 5.9e-66
Identity = 119/147 (80.95%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 6   LENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRE 65
           +   +FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND MIRKE Y+  +V+ E
Sbjct: 1   MSTSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEE 60

Query: 66  CRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGL 125
            +RII DSEI KEDD  WP PDRVGRQELEIV+G+EHISFTTSKIGSL+DV  SKDPEGL
Sbjct: 61  LKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGL 120

Query: 126 RIFYYLVQDLKCFVFSLISLHFKIKPI 153
           R+FYYLVQDLKC VFSLI LHFKIKPI
Sbjct: 121 RVFYYLVQDLKCLVFSLIGLHFKIKPI 147

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BLAST of CsGy3G007270 vs. TrEMBL
Match: tr|A0A0A0L898|A0A0A0L898_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116780 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.5e-82
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP
Sbjct: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60

Query: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120
           AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK
Sbjct: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120

Query: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
Sbjct: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 152

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BLAST of CsGy3G007270 vs. TrEMBL
Match: tr|A0A1S3AVD6|A0A1S3AVD6_CUCME (protein mago nashi homolog OS=Cucumis melo OX=3656 GN=LOC103483105 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 5.7e-82
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           M+AEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP
Sbjct: 1   MSAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60

Query: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120
           AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK
Sbjct: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120

Query: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
Sbjct: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 152

[Close]

BLAST of CsGy3G007270 vs. TrEMBL
Match: tr|A0A2P5A7U9|A0A2P5A7U9_PARAD (Mago nashi protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_360010 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 7.6e-79
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           MA E+ ENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDT+IRKEVY+TP
Sbjct: 5   MAGEEEENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYVTP 64

Query: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120
           AV+RECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSS 
Sbjct: 65  AVVRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSN 124

Query: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
Sbjct: 125 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 156

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BLAST of CsGy3G007270 vs. TrEMBL
Match: tr|A0A2P2JK15|A0A2P2JK15_RHIMU (Protein mago nashi isogeny OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.0e-78
Identity = 147/152 (96.71%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           MAAE+ +NGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEV+LTP
Sbjct: 1   MAAEE-DNGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTP 60

Query: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120
           AVLRECRRIIS+SEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK
Sbjct: 61  AVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120

Query: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
Sbjct: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 151

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BLAST of CsGy3G007270 vs. TrEMBL
Match: tr|A0A2P5FBD8|A0A2P5FBD8_9ROSA (Mago nashi protein OS=Trema orientalis OX=63057 GN=TorRG33x02_089930 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.7e-78
Identity = 145/152 (95.39%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 1   MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           MA E+ EN EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDT+IRKEVY+TP
Sbjct: 3   MAGEEEENSEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYVTP 62

Query: 61  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSK 120
           AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSS 
Sbjct: 63  AVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSN 122

Query: 121 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 153
           DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
Sbjct: 123 DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 154

The following BLAST results are available for this feature:

BLAST of CsGy3G007270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133764.1	3.8e-82	100.00	PREDICTED: protein mago nashi homolog [Cucumis sativus] >KGN56341.1 hypothetical...	[more]
XP_008437772.1	8.6e-82	99.34	PREDICTED: protein mago nashi homolog [Cucumis melo]	[more]
XP_022933981.1	1.5e-81	98.68	protein mago nashi homolog [Cucurbita moschata] >XP_022968427.1 protein mago nas...	[more]
XP_022949012.1	2.5e-81	98.68	protein mago nashi homolog [Cucurbita moschata] >XP_022974248.1 protein mago nas...	[more]
XP_022133206.1	9.5e-81	98.68	protein mago nashi homolog [Momordica charantia]	[more]

BLAST of CsGy3G007270 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02140.1	1.2e-74	88.16	mago nashi family protein	[more]

BLAST of CsGy3G007270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P49030\|MGN2_ORYSJ	3.7e-76	90.79	Protein mago nashi homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MAGO2 P...	[more]
sp\|O65806\|MGN_EUPLA	1.2e-74	92.47	Protein mago nashi homolog OS=Euphorbia lagascae OX=54672 PE=2 SV=1	[more]
sp\|O23676\|MGN_ARATH	2.2e-73	88.16	Protein mago nashi homolog OS=Arabidopsis thaliana OX=3702 GN=MAGO PE=1 SV=1	[more]
sp\|A0A0P0XB70\|MGN1_ORYSJ	8.4e-73	91.61	Protein mago nashi homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MAGO1 P...	[more]
sp\|Q566Y8\|MGN_DANRE	5.9e-66	80.95	Protein mago nashi homolog OS=Danio rerio OX=7955 GN=magoh PE=2 SV=1	[more]

BLAST of CsGy3G007270 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L898\|A0A0A0L898_CUCSA	2.5e-82	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116780 PE=4 SV=1	[more]
tr\|A0A1S3AVD6\|A0A1S3AVD6_CUCME	5.7e-82	99.34	protein mago nashi homolog OS=Cucumis melo OX=3656 GN=LOC103483105 PE=4 SV=1	[more]
tr\|A0A2P5A7U9\|A0A2P5A7U9_PARAD	7.6e-79	95.39	Mago nashi protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_360010 PE=4 SV...	[more]
tr\|A0A2P2JK15\|A0A2P2JK15_RHIMU	1.0e-78	96.71	Protein mago nashi isogeny OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
tr\|A0A2P5FBD8\|A0A2P5FBD8_9ROSA	1.7e-78	95.39	Mago nashi protein OS=Trema orientalis OX=63057 GN=TorRG33x02_089930 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR004023	Mago_nashi
IPR036605	Mago_nashi_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008380	RNA splicing
biological_process	GO:0008150	biological_process
cellular_component	GO:0035145	exon-exon junction complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G007270.1	CsGy3G007270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036605	Mago nashi superfamily	GENE3D	G3DSA:3.30.1560.10		coord: 6..152 e-value: 2.5E-84 score: 282.4
IPR036605	Mago nashi superfamily	SUPERFAMILY	SSF89817	Mago nashi protein	coord: 10..152
IPR004023	Mago nashi protein	PFAM	PF02792	Mago_nashi	coord: 11..152 e-value: 2.2E-81 score: 270.8
IPR004023	Mago nashi protein	PANTHER	PTHR12638	FAMILY NOT NAMED	coord: 1..152
IPR004023	Mago nashi protein	CDD	cd11295	Mago_nashi	coord: 10..152 e-value: 1.94403E-114 score: 322.289

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G007270	Cla021078	Watermelon (97103) v1	cgybwmB217
CsGy3G007270	Csa3G116780	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G007270	MELO3C005946	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G007270	ClCG05G000140	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G007270	CSPI03G07120	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G007270	CmaCh06G009430	Cucurbita maxima (Rimu)	cgybcmaB430
CsGy3G007270	CmoCh06G009680	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G007270	Lsi05G022230	Bottle gourd (USVL1VR-Ls)	cgyblsiB196
CsGy3G007270	Cp4.1LG08g00230	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G007270	MELO3C005946.2	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G007270	CsaV3_3G007250	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G007270	Cla97C05G080090	Watermelon (97103) v2	cgybwmbB196
CsGy3G007270	Bhi01G000449	Wax gourd	cgybwgoB272
CsGy3G007270	Carg25060	Silver-seed gourd	carcgybB0997

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G007270	Cucurbita maxima (Rimu)	cgybcmaB280
CsGy3G007270	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G007270	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G007270	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G007270	Bottle gourd (USVL1VR-Ls)	cgyblsiB183
CsGy3G007270	Silver-seed gourd	carcgybB0143